EsuBft940_6a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft940_6a-0001
Unique NameEsuBft940_6a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_561contigScaffold_561:200959..210357 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
SymbolHSP70
StatusManually annotated
Seed ortholog177437.HRM2_04030
ProteomeIdEsuBft940_6
Protein domainsPTHR19375
Protein domainsCYTOPLASMIC_DOMAIN
Protein domainsTMhelix
Protein domainsIPR013126
Protein domainsSSF53067
Protein domainsNON_CYTOPLASMIC_DOMAIN
Protein domainsG3DSA
Protein domainsTRANSMEMBRANE
Ownerapollo_admin@sb-roscoff.fr
Notechaperone protein os:desulfobacterium autotrophicum (strain atcc 43914 dsm 3382 hrm2) gn:dnak p [Automatic annotation]
Nb exon10
Max annot lvl28221|Deltaproteobacteria
Length2453
Hectar predicted targeting categorysignal anchor
Evalue5.7e-54
EggNOG OGsCOG0443@1|root,COG0443@2|Bacteria,1MVEN@1224|Proteobacteria,42M64@68525|delta/epsilon subdivisions,2WIWS@28221|Deltaproteobacteria,2MJ2X@213118|Desulfobacterales
Ec32 ortholog descriptionHeat shock protein 70 - likely pseudogene
Ec32 orthologEc-20_002650.1
Date last modified2016-08-22
Date creation2016-06-14
Preferred namednaK
KEGG koko:K04043
KEGG TC1.A.33.1
KEGG Pathwayko03018,ko04212,ko05152,map03018,map04212,map05152
Descriptionheat shock protein 70 superfamily
DescriptionHeat shock 70 kDa protein
COG categoryO
BRITEko00000,ko00001,ko03019,ko03029,ko03110,ko04147
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft940_6aEsuBft940_6aEctocarpus subulatus male Bft15bgeneScaffold_561 200959..210357 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft940_6a-0001-exonEsuBft940_6a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_561 200959..201954 -
EsuBft940_6a-0001-exonagat-exon-71457Ectocarpus subulatus male Bft15bexonScaffold_561 203228..203390 -
EsuBft940_6a-0001-exonagat-exon-71451Ectocarpus subulatus male Bft15bexonScaffold_561 204393..204541 -
EsuBft940_6a-0001-exonagat-exon-71452Ectocarpus subulatus male Bft15bexonScaffold_561 204976..205107 -
EsuBft940_6a-0001-exonagat-exon-71454Ectocarpus subulatus male Bft15bexonScaffold_561 205571..205696 -
EsuBft940_6a-0001-exonagat-exon-71449Ectocarpus subulatus male Bft15bexonScaffold_561 206081..206314 -
EsuBft940_6a-0001-exonagat-exon-71450Ectocarpus subulatus male Bft15bexonScaffold_561 206898..207002 -
EsuBft940_6a-0001-exonagat-exon-71455Ectocarpus subulatus male Bft15bexonScaffold_561 207767..207870 -
EsuBft940_6a-0001-exonagat-exon-71453Ectocarpus subulatus male Bft15bexonScaffold_561 208614..208700 -
EsuBft940_6a-0001-exonagat-exon-71448Ectocarpus subulatus male Bft15bexonScaffold_561 209170..209439 -
EsuBft940_6a-0001-exonagat-exon-71456Ectocarpus subulatus male Bft15bexonScaffold_561 210271..210357 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft940_6a-0001-exonagat-three_prime_utr-23294Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_561 200959..201714 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft940_6a-0001-cdsEsuBft940_6a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_561 201715..201954 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft940_6a-0001-exonagat-five_prime_utr-15149Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_561 209405..209439 -
EsuBft940_6a-0001-exonagat-five_prime_utr-15150Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_561 210271..210357 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft940_6a-0001EsuBft940_6Ectocarpus subulatus male Bft15bpolypeptideScaffold_561 201715..209404 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft940_6a-0001 ID=EsuBft940_6a-0001|Name=EsuBft940_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2453bp|location=Sequence derived from alignment at Scaffold_561:200959..210357- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
CCTTTCAGTCTTCAGCGCGCGGCACTGACTCGCACACACATCTCGAGAGC
TTCCACTAGCCTTGGATAGGTTATTGGCCAACGTAAGAGGGCTAAGTACA
TCGTCGAGGTTGTACCGCAGCCATGGCTCTGCGCCAAGCATCAGTCGCAG
GGAGTAGAGTCGGCATGGCGTTGCGACGAGAAGCGACCGCCCGAAGGGGA
AAGAGGAGGCCGACAGCTCTGGCGGGGCTTGGGCTGGACGGCGGTGGCAG
TTGCCGGCACATACATCCTTCCGGTCGGAAGGAAATGCTCCCCGTTATCG
GGGGCGCGCTCGCGGTGGCTGCCGTGGCCACCGGGCTTCGATACCTCATC
AGAGCAGGGAAGCGGATGAAGGAAATGGAAGAGCAGGAGAAAAAGTCGGG
CGGCGGGGGAGGAGGAGGTGGGGGCGGGGGCGGAGGTGGCGGAGGGCCTG
GAGATGGGGTGCCCTCGGACGGGCCTGCCTTTGGGCTGGACGTGGGAGTG
ACCAACCTTCGGCTGGCGTTCGCAACTTCGATCAAGACGCGACCGGAGGT
GGTCGAGAACCGCGAGGGAAGCCGATGGACGCCTGCGTGCGTAGCCTTTA
AGGGAGGGGGCGACCCCATAGTCGGGAGCATTGCCAGGGCGCAAAGATTC
GAGTCGGCGTCGACGACAATGCTAGGGGTGCAGCCGCTGCTGGGTCTTCC
ATATCTCGGGCCGGAATCGCAGGCGATCGCCGCGTCTGCATCCGCCGGGG
CTCTGGGAGGAGGCGTGCTGGAAGAGGGGGAGGGGGGTATGGCCGGGCTG
AGGGTCGGGGAGGGGGGGAAAGTTTTGACGGCTCAGGAATCGATGAGTCT
GATGCTCGCCAACATCAAGGCCCTGGGAGAGCATAAGGTGCAAGCGGGAG
GCGCAGCCGTGTTGTCGTGCCCGGCGTACTTCAGCGACGACCAGCGGGAC
GTGATGGCCGCGGCTGGCGAGGACGCCGGCCTTGTGGTGCTCGACACGAT
CGACGAGCCCGTGGCGGCCGTGATGGCAGCAGAGGACATGTCCCTTCTGC
CCAAGGGGGACGACGCCGGAGGCCTGGTTGGTGTATTGGACGTCGGCGGG
CGAACCGCCCAGTGCAGCATAATCGACACGGCCGGTACAGCCGAGGGTGA
TCGACCGAAGATGGTGGGATCTGATTGGACTGCGGAAACAGGGGGCGACC
AATGGGATGTCGGCATCGTAGACCTGTTGGACGAGGAGTTCCAAAAGGCG
AACGGAGGCCTGAGTCTCAAGGGCGATGCCATGGCTCTCACAAGGCTCTT
CGATGCCGCGACCGCCGCACGCGTGGAGCTGACTCGCGCGCAGCAGTCCC
ACGTGAACATCCCGTACATCACCGCGGACCAGACGGGGCCCAAGCACCTG
GACGTGATGCTGACGAGGGCGAGGGTGGACCGCATCATCGAGCCCCTCCT
GAGAAAGGCGGAAGGACCGTGCGAAGGCGCCTTGAAGTTGGCTCAAGTGG
ACGCCTCCGCCCTCAAGGCCGTCCTGGTGATCGGAGGCTGCTCCCGGACG
CCGGCACTCCAAGACCTCGCCTCCAAGATATTCGGAAAGGCCGGAGGCGG
GGGCGGGGCGGGGGTGATCTCGTCTGCCGAGCAGTCGGACGAGATGGTGG
TTCTTGGGGCTGCGCTCGAAGCTCGCCATCTCATCTACGGGGAGTAAATT
TTAGTTGTTTTGTAGTTGAACTTGGGTGGAGAACGAAACAGATGGGGAGA
GTACAAGTATAGTGTTTTTTGGTGGTGTACTGCTGTAGCGTGGGCGATTT
TTGAGGTGTTGGGGGGCTCGTGTCTGGTGTGGGTTTCTATCGGAGCCGAT
CGGAATGTGGCGGTGTGGGAATCGGGTCCTCGAGGTGGTCGCGCTAGGTG
TGAGAAAGACAGGAGCGCTGAAAGGTTTAGTTTTTTCGCAATCATGTGCG
GAGAGATGTATGCGATTGATGTTTTGGTTGAGTTCGTCAGAATTATTGGA
GTTCATTTTTGCCCGTCGGGGTTTTTGATGGGACGCGTATGTCGCCTATC
TTTTTGACAACGAAGCTTCCACCTTAGAACCGGTCGCAGACTCAGCTGCA
ACAGCAACATCATCAACAGTAGCAACAACAACAGCAACAGCGGCAACCGT
GTTGATACAACAAGCGCCCTCGGTTGTTGACATGTACACACAAAGGGGCA
TGTAGACGCGCGTGCTAAAAGCACGAGACACGACGGCCTATTTAATAGGT
TTCAAGGCATCTCGCCGGTTCACCGGTTCACCTCGGTCATCCAAGAAAAG
AGAGCGACCTTCCGCAACGCTAACAACGTTCGCTTTCGAACGGGTGGGTC
CGCAAACTGCTCACCACCGCGAACGAAAGTCTGTGTGAGGGCTTGGGGAA
ACGTTAGGTCCCCGGCATTTTAGGTGTTGTGAGCTTGGGAAGCGTTAGGT
CCC
back to top

protein sequence of EsuBft940_6a-0001

>EsuBft940_6 ID=EsuBft940_6|Name=EsuBft940_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=524bp
MALRQASVAGSRVGMALRREATARRGKRRPTALAGLGLDGGGSCRHIHPS
GRKEMLPVIGGALAVAAVATGLRYLIRAGKRMKEMEEQEKKSGGGGGGGG
GGGGGGGGPGDGVPSDGPAFGLDVGVTNLRLAFATSIKTRPEVVENREGS
RWTPACVAFKGGGDPIVGSIARAQRFESASTTMLGVQPLLGLPYLGPESQ
AIAASASAGALGGGVLEEGEGGMAGLRVGEGGKVLTAQESMSLMLANIKA
LGEHKVQAGGAAVLSCPAYFSDDQRDVMAAAGEDAGLVVLDTIDEPVAAV
MAAEDMSLLPKGDDAGGLVGVLDVGGRTAQCSIIDTAGTAEGDRPKMVGS
DWTAETGGDQWDVGIVDLLDEEFQKANGGLSLKGDAMALTRLFDAATAAR
VELTRAQQSHVNIPYITADQTGPKHLDVMLTRARVDRIIEPLLRKAEGPC
EGALKLAQVDASALKAVLVIGGCSRTPALQDLASKIFGKAGGGGGAGVIS
SAEQSDEMVVLGAALEARHLIYGE
back to top

mRNA from alignment at Scaffold_561:200959..210357-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft940_6a-0001 ID=EsuBft940_6a-0001|Name=EsuBft940_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=9399bp|location=Sequence derived from alignment at Scaffold_561:200959..210357- (Ectocarpus subulatus male Bft15b)
CCTTTCAGTCTTCAGCGCGCGGCACTGACTCGCACACACATCTCGAGAGC TTCCACTAGCCTTGGATAGGTTATTGGCCAACGTAAGGTGCGAGAAACGC ATGCTGTGAGGCGTGTGCAGGGAGGGATGGGACAAGTGTATTTTGGTTGC GCCTTTTTTGTATTTGCCGTCCCTGACTCCTTGACATTTGGGCAATATAT ACCATGTACATACACACCTCGCGCAGCAGGTACGGTCGTGTTTGCGTGAC GTCCATCGCAACATTAACCAGGAGATATCGGTAGCACGGGGTTTCTGTTG TGTTGCACTGTTAATCCCCTGCGTTGTCTACCGACGGTAGTTGTGCACGA AATATTTCTTTCGAGATGACCGCTTGTGCTTGTTGTGTGGTCTGGCATCC GCACAACGCGCACCACAGCAGCACAATCGGCCGCAGGACAAGGTGTAGGT GGAGACGTGCAGTAGATGGCAGCAAGATCACCAACATGCAATTAGTCGAT GCTGGTCGTCTTCATCGTTGACACATACGAAAACATGGACAAGTTATTCG TCGTTTGTTGTCCCCTCGACAGCAGCTCCGGTGGAAAAGGGCCGACGGCG GCCGGGCAACCCGGACCAGAACCCTTCAGCAGCGTGTGTAAACATAGGGA TATATTCGAACAACCAGTTCACAGCGCATGTGCAGTGCTCCGTCCTGATT CGCGATTGCCCGAAGAACGATGCTGTGAGCTGCAGCTACGACAACAACTT CCATCATGGATGTGCTGCTGTTTTGTTGGAACATGGAGAAACGGTTTCCC TTCGATCGAAACCTGCGCTTCCGCGGAATTCGCGCGGCGGCATGATGTCA CCGCGTTGTTCCTGAATGCTGCCCCCCATCGATCACAACTCCCCCGCTAT TATTGCGCGTCGTATCAGAGGGCTAAGTACATCGTCGAGGTTGTACCGCA GCCATGGCTCTGCGCCAAGCATCAGTCGCAGGGAGTAGAGTCGGCATGGC GTTGCGACGAGAAGCGACCGCCCGAAGGGGAAAGAGGAGGCCGACAGCTC TGGCGGGGCTTGGGCTGGACGGCGGTGGCAGTTGCCGGCACATACATCCT TCCGGTCGGAAGGAAATGCTCCCCGTTATCGGGGGCGCGCTCGCGGTGGC TGCCGTGGCCACCGGGCTTCGATACCTCATCAGAGCAGGTGGGGTGGTAG AATACTTGCTTTGTTTTGGAGCGCTGGCAGGGTGGATGTTTTTGTGGGCC TTGCGCGTGTTGTTTGAGCACGCAAGACGGGCGTGTTGAGCACGAAAGAA AAGGCTTGGGTTGAACGGTGCTGGTGTTTGGTCGATCGTTGAGGATCGCA TTTGTCCTCTGTTATAGAGAGAATATTGTTGAGGATGCAATGACAAGGGG GAACTCGGTGACTGTCTAGCCTAAGGGGACAGGACTTAATTTCTGTCGGG ACACCCAGCTATTGATCCCGTATCCGCCCCGTATTCTGATCTCGCCATAG TCGATTGATGGTGTCGGGACACCACTTTCTTCTCTCCCTTCTGTAGTCCG TGCTCATGGGCCGGCCCATGCTGATTACGTCCACCCTGTGTGGGGGGCTT TTTCTGCGGGCCATTCCTTGACCGTGCTTCTTGCCCACGTCTCTCACTGT CTTGAAGGGAAGCGGATGAAGGAAATGGAAGAGCAGGAGAAAAAGTCGGG CGGCGGGGGAGGAGGAGGTGGGGGCGGGGGCGGAGGTGGCGGAGGTGAGC AGTACCTCCACAACTACAGAGCGCTCGTGTGTCCTACCGAAGGTTCTGCG TTTCCTACTGTTGCCGCATCTTCTTTCGTATGATGTACCATCATCATTGC AATCTTCGTGCTTTGCTTTTTTGCTTCCAAAGTGGCATATGCCCGTTCGG CATGTGTTGCTCTCTTTGGCGGTTGCGATTGCAGTACACCCTGTCATTTT GCAGTTCATGCGTGTGCGTGCATGTTGTCGTTGATGCGCGTGGCGGCTGT GTTCCGAATCTTCGTGTACAGCCGTTTCCAAAGGCTACAAGCGCTTGGCG GACCATGTTGCTAAGTCCTGGCGTCGCTAGTACTTGGCTTGGGAAGCGAA AACTCGATTGAGAGCTGGCACGGACAAGGGAAATACTTTGTTCATGCCTC AGTCCAGGTACCCCCAACATCGGTTTCCGCATTTAAAGCACCAACAAGAT GCAAGCGTGGAATAAGGTGAAGGGCAGGGCTTGGATACTGGCGGGATTAC CTTTGTCCGTTTCCTCCATGCTAGCACGGTCCGCGATCAGTACACCCCGA GTTTTCTGTACCAGGCGACTACGCTGCCCTTGACCGTACTTTCGTTCAGC GAACATCAGCGGTGGTCTCCTTTTCAAGCAGTCCGAGAGGAAACTACTGG ACAGAAACACAAAAAACGCGTGTCTACCTTACCATACCGTTGCTGCTGTA CTACCCTTACACACGTTACACGGTGATTGCGCCGCAGGGCCTGGAGATGG GGTGCCCTCGGACGGGCCTGCCTTTGGGCTGGACGTGGGAGTGACCAACC TTCGGCTGGCGTTCGCAACTTCGATCAAGACGCGACCGGAGGTGAGAGAA CAGGTTTCGGGTTTCCAGAGACGCCGAGCTGCGTGGGTATTGGTTTGGCG CCGTCTTGCTCAGAGCGCGTCTCCGACTCGTGTGTGGCTTGGACGAACGA TCTGCTGCGGGTTCAAACCGTCGGCGAGTTCTGTGTGGGGGTACAGGACC AGAGTCGCATCTTTACCCTCGTAATAGCTGCCAGTGGGGGAGAAGCGGGG GGGCTGGTGCTGTGGTTTAGCGTTTGTTTTTGAGACTTATTGATTGGCTC GTGAGATTCAAAGCTACCTATGTAGGTTGGGTCGATGCCACTAAGAGGAG ACCGTAAGGTTGGAGATGGGGTCAAGGGGTTGTGTTGTATGGGACCGTAG AAACAAGGAGGGCGCTGTTGGTTGTACGCCGCTTCTAATGCAGGTGTAGC TTACGAGTCAAGCTGAAGGCTTGGGTTGCTACGGATGCGACAATGGACTG ATTCCGGCCCATGAGAGCGCTGTGCGATGCGACACCGAGACACGAAACCT TCAAGCTCTGCGGTGTTGATCTGTGCGTGTATGAGGGAAAGCGATGGCGT TGGATGGGGACGCAAGCCTAGCTAGTTCGTGAGGGAGCCGAGAGATCGTC CAAAGGCGCGATCGAGGCAATTAAACCATTACGTTTTTGGCCTCCTGCAT GATATATTCCCGGCCTCGACACCTAGGACTTAGCGGTCGTCCACTGCGTC TATTGACGCATCCTGCCCCCCTCCTGTGCTGTGCCGCCCGTCCCCCTCCG CAAAGGTGGTCGAGAACCGCGAGGGAAGCCGATGGACGCCTGCGTGCGTA GCCTTTAAGGGAGGGGGCGACCCCATAGTCGGGAGCATTGCCAGGGCGCA AAGATTCGAGGTGCAGAGCATCACTTCTCTCTGTGTGTGTGTTGCTGGCA TCGACCGCGCTGGCCGGCTGCAAAATAGTAAGACTGATTGTGAGAGGCGC GGGGATTCGGGCGTGACGGAGAATTTGTCACGCACAATCTTGTAATAAGC ATCTCGTGTCAGTTGGTCGCTCACCGCCGCACGTCATCATGCCATCATTG GGCTCACGGGTTCACACTGAAATTAGCTGTTTGGGTTGATATTGAGCCGT GGTTGCTCCCGGCCTTTGGACACCCCCTTGCCGTAGCCGAGCAAGAGCGT CCCTAGCAAACGAGACCGCCTCCGCACTCTCATTCTCTCTCGCTCCACCT GGAGCTTGGGGGTCCCGCGACCACCGACATGCATCCGCCCTCCACACGGA TTACACGGGTGTCCTCGAAACCCAAGCTTTGTCGCTGCCTGACCGCGCCA CGTCAGGCGTGCTAGCTCGCAGCCCAAGCCAAGCAAGTACCCTGCAAGTC TTACCCTCCGCACATGCCGCACCTGATCAGTGCTAGACGTCATCTCCTCA TCGTTACCCCCTCCCCCTACGTACCCCCGACCTCTGTTCGCAGTCGGCGT CGACGACAATGCTAGGGGTGCAGCCGCTGCTGGGTCTTCCATATCTCGGG CCGGAATCGCAGGCGATCGCCGCGTCTGCATCCGCCGGGGCTCTGGGAGG AGGCGTGCTGGAAGAGGGGGAGGGGGGTATGGCCGGGCTGAGGGTCGGGG AGGGGGGGAAAGTTTTGACGGCTCAGGAATCGATGAGTCTGATGCTCGCC AACATCAAGGCCCTGGGAGAGCATAAGGTGAGGATGGCGAGGACGGTGGT GGCGGTGCGGGGCGGAGGATGGTGATGATGAAGGTGTAGCCATGGGGCTT GGTAGTGGTGGTGGGGGCGATGGTAGTGGTGGTGGGGGCGATGGTAGTGG TGGTGGGGGCGATGGTAGTGGTGGTGGGGGCGATGGTGGTGGTGGTGGGA AATGGCGGATGCGTTGGTGGCCACGCAGGGGTTTAGCATACGACGAATGC CTCCAACTGTGGTTCTGAGATTTGGTGGGCTTCTGACCGGGAAAAGACCA GACATGCTTCTCCATCAAGGCTTGGCGCTTGAAACCAATTGTTGACGGCG TTGTTTGTGATGTGTGTAGCTCATGGGTGCTCAACTGCGTGCCGACGAAT CGTTTGTGAAGGTGCAAGCGGGAGGCGCAGCCGTGTTGTCGTGCCCGGCG TACTTCAGCGACGACCAGCGGGACGTGATGGCCGCGGCTGGCGAGGACGC CGGCCTTGTGGTGCTCGACACGATCGACGAGCCCGTGGTACGCTTGCCCA CTCTCTATTTAGCCTGCCGTCAAGTGTCTCTTGGCGCGTGTAGTGCAATC GGCGTGCGGCCAGGTTAGACATGTGTCGCAGGGGCCCGTTTTCGCGGACT TGTGGTCAATATTTTACGTCTCTCTCCAGGACAAGCATGAGTCACGCGAT GTTGTTGTCTCCAGGGTGTGGTCTGCGATGAGCTTGTCCCTGTCCTTCCC GCGTGAGTTGGTGTGTGTAGTGACTTTGCGACTTGACCGATCACCCGCAT GACTCCGTTGAAGTTCTGGACTTGCATAAAAAAAGTCACGCAGAACGTGT TGTTGACGCGTTCGCTTCGATGCTTTCCGCGTTTTACCACAGGCAGCTGT AATGAATTGGTTCCTAATATGGTAGATGGACTAAAACTGAAAATGCGTCT TAGCTATTGCGCTCGCTTGGATACGCTACCGTTCGTTTCCGTGATAACAG GCGGCCGTGATGGCAGCAGAGGACATGTCCCTTCTGCCCAAGGGGGACGA CGCCGGAGGCCTGGTTGGTGTATTGGACGTCGGCGGGCGAACCGCCCAGT GCAGCATAATCGACACGGCCGGTACAGCCGAGGTAGGCATGGGAAGGGAT CCATCGATCAATCGATCGCTGCACGTTTTTTTTTTTTTCATGTTTTTGTG TGGCCCGATCTCGCTTGTGGCCACGGCTTCACCTGCTTTCCTCTCGGCTC TTGGTATGTCTGTAGATTGGATGGCAGGAGTTGTGGTCGGATGATGATGA TGATGATGCGAGTTTGTTTTGTGATCCAGAGCGGCCGGCTGTGGTAGACT GGAAGTAGTTTTTTCTTGCAGTGTATTTGGCACTGCTTACCTACTTTCTA TCTCACTGATACAACCAGTGCGTCATGTTTGATTCTTGCACAACGCTGGA GGAGTATTACTGTTACCGTATACGGAGTACTTTGTATACATGTTATCAGC GCGGACATCATGGCATCAATTCTGCATATTCCCAACGCTGTTCTCGTCTG CTCTCTTGCTGAGCAGGGTGATCGACCGAAGATGGTGGGATCTGATTGGA CTGCGGAAACAGGGGGCGACCAATGGGATGTCGGCATCGTAGACCTGTTG GACGAGGAGTTCCAAAAGGCGAACGGAGGCCTGAGTCTCAAGGGCGATGC CATGGCTCTCACAAGGTGAGGGCCTATTTCGCGTTTTCTCAGCCAGCACA TGAAATACATTATGCCGTTTCGTATACAGGTGTTTCAGGCCGTGTGTTGC GTACACTAGATCGTGCTTCTGGCGGCAAAATATTTTGTATGTGGGAGTTA TTCTTTGGCAGGGTGCGAATGGTGAGTCAATTTGCGGAGAGGACTCCGCG TCCGTGACTTCGTAACCGTTTGGCCGCTCGATGTCATTGGGAGACGCAGA TTTAGGCTTGAACAGCAAACGTGACCCCCCTCTCCCCATGCCTTGTGCGC ATCTTCCCCGTCGATTTTCTTGTTGTGTATGTGTGTGTTTTAGATTTGCG ATATCTACGCCGTCCCCCTCGTCCCCTCCGTGGATTCTTTCCTTTCTTCT TCTCTAAATTTCGTTTTGAGTCGTACGCATGCATGCCGCCGATTCAATGT TGTCTACACATGCTTGTTCCACCTCCCTTTTTTCATGTCGATTGACCCGT ATACGCACGGCGGCGGTTCTTTTTGAGTCGTACGCATGCATGCCGCCGAT TCAATGTTGTCTACACATGCTTGTTCCACCTCCCTTTTTTCATGTCGATT GACCCGTATACGCACGGCGGCGGTTCTTTTTGAGTCGTACGCATGCATGC CGCCGATTCAATGTTGTCTACACATGCGTGTTTCACCTCCCTTTTTTCAT GTCGTTTGACCCGTAATTTATACGCACGGCGGCGGTTCTTTTTGAGTCGT ACGCATGCATGCCGCCGATTCAATGTTGTCTACACATGCGTGTTTCACCT CCCTTTTTTCATGTCGTTTGACCCGTAATTTATACGCACGGCGGCGGTTC TTTTTGAGTCGTACGCATGCATGCCGCCGATTCAATGTTGTCTGCACATG CGTGTTTCACCTCCCGTTCTTCATGTCGTTTGACCCGTAAACGCACGGCG GCGGTTCTTTTTTTTTTGTGCCTCTGTTTTGCCTGCATGCTACTTGGTTG GCTGGGCTTTGGAAAAGGCTCTTCGATGCCGCGACCGCCGCACGCGTGGA GCTGACTCGCGCGCAGCAGTCCCACGTGAACATCCCGTACATCACCGCGG ACCAGACGGGGCCCAAGCACCTGGACGTGATGCTGACGAGGGCGAGGGTG GACCGCATCATCGAGCCCCTCCTGAGAAAGGTACGGTATGCATACGCTTA TCCTGTCCGTCCGATGGCGATGCACACGACGATTATGCGGTTTTCACGTG TATGTCGTCCTACTTCTTTTTTATGATGGCACAAACGTCCCCTCATATGT TGTGGCGAGACGTATGTGCGCGCGCTAATAACAAGCGTGTCGTATGTTGA TTTTCAATTTTCCATTCCGATAACCTCCCCTGAGCCCCTCGGTTCCACGA GATGGGTAAGGAGTGTCCGGTGGAGTATTTGCTCTAGCGAACAGGGTAGG GCTCGGGCAAGGGCTCCTTTGGGGTTTCATGTGTCAACTAGGTATGTAGT GGGCGGCGGCATCTGAAGCACCCCTTCTGAGAACCGTACTCGTGCCGTTA CACGTGAGTTTTTTTTTCCTTGGGTCCAGGAGAAGCACGTGGACACGCTT AACTCAACTCCGCGGTGCCACCGTCGATGCTAGTGCGCTAAATACTGTCT GCCGCTGAGCGTGCGTGGTCGGTGGTGGTGCGCTATCTGTGGATGTTTGA CGGACGAGATGTCGTAAACGGAACGAACGCGCGTGTTGAAGACTGACCGG GCTTGATGTCGCTCGTGGCGCCTTCTCGGTTCTCTGCCTCTTGCTTGTGT ATCTGGGAGGGGAGGCTGCAGCCGGACGGGTGCACCTTGTTCTTGTTGTC GTTTCGATTGCTCTCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCTCTCCCTCTCCC CCCCTCCGCTCTCTCTCTCTCTCTCCCTCTCTTTCTTTCTCTCCCTCTCT CTCTCTTTCTTTCTCTCCCTATCTTTTTCTCTCTCTTTCTTTCTCATTCC CCGGGTTTGGGAGTTGGGCCATGCCTGTCTTGTGCGAAAAAAGTGCTGGA CCCACACACAGAAATGAATACAAAACGTCTCTACGACGTCATTTTCCGTC GCCCCATTTACTTAACCGCCTTGCAGATTTCGACCCACCGCATGGTCAAT GATCGTCAACAACTATCGCGATGGAAACATGAGTGCACTCCCCCCCCCAC CGCACGACCTTGCCCCCAGCACTGATGAAGTCCGATCTAGGGTCACGCAT AAACCAATTCATCGGTCGACTGTAATGGGTAGGCACATGTCGGCATATGT AGCGCTGCTGCTGCTTTTCTTGACCGATGGCATCAACTCCGCGTATCCCG CAGGCGGAAGGACCGTGCGAAGGCGCCTTGAAGTTGGCTCAAGTGGACGC CTCCGCCCTCAAGGCCGTCCTGGTGATCGGAGGCTGCTCCCGGACGCCGG CACTCCAAGACCTCGCCTCCAAGATATTCGGAAAGGCCGGAGGCGGGGGC GGGGCGGGGGTGATCTCGTCTGCCGAGCAGTCGGACGAGATGGTGGTTCT TGGGGCTGCGCTCGAAGCTCGCCATCTCATCTACGGGGAGTAAATTTTAG TTGTTTTGTAGTTGAACTTGGGTGGAGAACGAAACAGATGGGGAGAGTAC AAGTATAGTGTTTTTTGGTGGTGTACTGCTGTAGCGTGGGCGATTTTTGA GGTGTTGGGGGGCTCGTGTCTGGTGTGGGTTTCTATCGGAGCCGATCGGA ATGTGGCGGTGTGGGAATCGGGTCCTCGAGGTGGTCGCGCTAGGTGTGAG AAAGACAGGAGCGCTGAAAGGTTTAGTTTTTTCGCAATCATGTGCGGAGA GATGTATGCGATTGATGTTTTGGTTGAGTTCGTCAGAATTATTGGAGTTC ATTTTTGCCCGTCGGGGTTTTTGATGGGACGCGTATGTCGCCTATCTTTT TGACAACGAAGCTTCCACCTTAGAACCGGTCGCAGACTCAGCTGCAACAG CAACATCATCAACAGTAGCAACAACAACAGCAACAGCGGCAACCGTGTTG ATACAACAAGCGCCCTCGGTTGTTGACATGTACACACAAAGGGGCATGTA GACGCGCGTGCTAAAAGCACGAGACACGACGGCCTATTTAATAGGTTTCA AGGCATCTCGCCGGTTCACCGGTTCACCTCGGTCATCCAAGAAAAGAGAG CGACCTTCCGCAACGCTAACAACGTTCGCTTTCGAACGGGTGGGTCCGCA AACTGCTCACCACCGCGAACGAAAGTCTGTGTGAGGGCTTGGGGAAACGT TAGGTCCCCGGCATTTTAGGTGTTGTGAGCTTGGGAAGCGTTAGGTCCC
back to top

Coding sequence (CDS) from alignment at Scaffold_561:200959..210357-

>EsuBft940_6a-0001 ID=EsuBft940_6a-0001|Name=EsuBft940_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1575bp|location=Sequence derived from alignment at Scaffold_561:200959..210357- (Ectocarpus subulatus male Bft15b)
ATGGCTCTGCGCCAAGCATCAGTCGCAGGGAGTAGAGTCGGCATGGCGTT
GCGACGAGAAGCGACCGCCCGAAGGGGAAAGAGGAGGCCGACAGCTCTGG
CGGGGCTTGGGCTGGACGGCGGTGGCAGTTGCCGGCACATACATCCTTCC
GGTCGGAAGGAAATGCTCCCCGTTATCGGGGGCGCGCTCGCGGTGGCTGC
CGTGGCCACCGGGCTTCGATACCTCATCAGAGCAGGGAAGCGGATGAAGG
AAATGGAAGAGCAGGAGAAAAAGTCGGGCGGCGGGGGAGGAGGAGGTGGG
GGCGGGGGCGGAGGTGGCGGAGGGCCTGGAGATGGGGTGCCCTCGGACGG
GCCTGCCTTTGGGCTGGACGTGGGAGTGACCAACCTTCGGCTGGCGTTCG
CAACTTCGATCAAGACGCGACCGGAGGTGGTCGAGAACCGCGAGGGAAGC
CGATGGACGCCTGCGTGCGTAGCCTTTAAGGGAGGGGGCGACCCCATAGT
CGGGAGCATTGCCAGGGCGCAAAGATTCGAGTCGGCGTCGACGACAATGC
TAGGGGTGCAGCCGCTGCTGGGTCTTCCATATCTCGGGCCGGAATCGCAG
GCGATCGCCGCGTCTGCATCCGCCGGGGCTCTGGGAGGAGGCGTGCTGGA
AGAGGGGGAGGGGGGTATGGCCGGGCTGAGGGTCGGGGAGGGGGGGAAAG
TTTTGACGGCTCAGGAATCGATGAGTCTGATGCTCGCCAACATCAAGGCC
CTGGGAGAGCATAAGGTGCAAGCGGGAGGCGCAGCCGTGTTGTCGTGCCC
GGCGTACTTCAGCGACGACCAGCGGGACGTGATGGCCGCGGCTGGCGAGG
ACGCCGGCCTTGTGGTGCTCGACACGATCGACGAGCCCGTGGCGGCCGTG
ATGGCAGCAGAGGACATGTCCCTTCTGCCCAAGGGGGACGACGCCGGAGG
CCTGGTTGGTGTATTGGACGTCGGCGGGCGAACCGCCCAGTGCAGCATAA
TCGACACGGCCGGTACAGCCGAGGGTGATCGACCGAAGATGGTGGGATCT
GATTGGACTGCGGAAACAGGGGGCGACCAATGGGATGTCGGCATCGTAGA
CCTGTTGGACGAGGAGTTCCAAAAGGCGAACGGAGGCCTGAGTCTCAAGG
GCGATGCCATGGCTCTCACAAGGCTCTTCGATGCCGCGACCGCCGCACGC
GTGGAGCTGACTCGCGCGCAGCAGTCCCACGTGAACATCCCGTACATCAC
CGCGGACCAGACGGGGCCCAAGCACCTGGACGTGATGCTGACGAGGGCGA
GGGTGGACCGCATCATCGAGCCCCTCCTGAGAAAGGCGGAAGGACCGTGC
GAAGGCGCCTTGAAGTTGGCTCAAGTGGACGCCTCCGCCCTCAAGGCCGT
CCTGGTGATCGGAGGCTGCTCCCGGACGCCGGCACTCCAAGACCTCGCCT
CCAAGATATTCGGAAAGGCCGGAGGCGGGGGCGGGGCGGGGGTGATCTCG
TCTGCCGAGCAGTCGGACGAGATGGTGGTTCTTGGGGCTGCGCTCGAAGC
TCGCCATCTCATCTACGGGGAGTAA
back to top