EsuBft937_9a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	EsuBft937_9a-0001
Unique Name	EsuBft937_9a-0001
Type	mRNA
Organism	Ectocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_376:136310..142945+
coding sequence from alignment at Scaffold_376:136310..142945+

spliced messenger RNA

>EsuBft937_9a-0001 ID=EsuBft937_9a-0001|Name=EsuBft937_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1068bp|location=Sequence derived from alignment at Scaffold_376:136310..142945+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GTTGCGCTTAGGCGTAGCATACCACTGTCCTCCTCAACTGCAAACTCGGG
GAACTCTTGGTCAGCACCGAACCCTCCGACTTCCGAGGTGAACTGCGTCC
GCTGGTGCACCGGAACGGGCCGTTGAAACGTGAGGCTCCATCGATCGGCC
TGCTGTTTCCTCCCTCCGACAAGGAAAATGGAACCGGCAGGGGGCGAGTC
TCCAGCACGTGCCGCTTCGGGAGCGACGCCCAGAGGGAGCGAGAAGGACG
CCTTGCTCGGATGGGGAAGCGGCGGCAACGCCAGCAACACGATGATTCCT
AGCACAGTGGGGAGGGGGAGGGGCAAGGGCAGCAGCAAGCTGAAGGGGGG
GTCCGGCGACCGCGGCGGGACGACCGCTTACACGAAGGGACCGCTCGGGT
CTGGCGCTAGGTCGAGGATGGCTTCCTACGACTCGGCGACTACCCTTGGC
TTACCGAGGCGCGTGTCGAGCCGGGTCCGACTGGAATCGTGGGAATTTCC
TGGATGGGGGAGCCACTTTACCATGAACCCACCGCCTGGGCTCGCCCTGT
CGAACCCTAGCAAGGACCACGGGGGCCACGAGAAGCTGGGAGAGTGTGTG
CTGTACGTGACCGGCCTGGTGACCGGATTCGCTGGCTGGTTATCCCCGGT
GTGCCTGCTCATGGTCGCGGGGATTCTCTACCTCTACAGGTTCATTTACG
GCGAAGCAATCTCTGCGTTGCCGATGAACGGCGGCGCGTACAACGTGCTG
ATCAACACGACCAGCAAGCCGGTGGCCTCCTTCGCCGCCTGCCTTGCCGT
AATCTCGTACATCGCCACCGGGGTTGTCTCCGCCGCAACCGCCATCTCCT
ATCTACAGGATTTCCCCGCGGTGATGGTCGGCGGCACGGTGGTGGAAGGG
ACCTGGGTAACCGCAATATTGTTCGGGGTCTCCAGCGCCATGCTTGGCGT
GTCGGGATTCGAGTCGTCCTCGCAGTTCGTGGAAGAGCAGGCCAAGGGCG
TCTTCGTCAAGACCCTTCGTAACATGCAGGTGTCTTGCTGTCGTGTGAAC
GTAGGGTCCGTGGGTTAG

protein sequence of EsuBft937_9a-0001

>EsuBft937_9 ID=EsuBft937_9|Name=EsuBft937_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=296bp
MEPAGGESPARAASGATPRGSEKDALLGWGSGGNASNTMIPSTVGRGRGK
GSSKLKGGSGDRGGTTAYTKGPLGSGARSRMASYDSATTLGLPRRVSSRV
RLESWEFPGWGSHFTMNPPPGLALSNPSKDHGGHEKLGECVLYVTGLVTG
FAGWLSPVCLLMVAGILYLYRFIYGEAISALPMNGGAYNVLINTTSKPVA
SFAACLAVISYIATGVVSAATAISYLQDFPAVMVGGTVVEGTWVTAILFG
VSSAMLGVSGFESSSQFVEEQAKGVFVKTLRNMQVSCCRVNVGSVG

mRNA from alignment at Scaffold_376:136310..142945+

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft937_9a-0001 ID=EsuBft937_9a-0001|Name=EsuBft937_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=6636bp|location=Sequence derived from alignment at Scaffold_376:136310..142945+ (Ectocarpus subulatus male Bft15b)
GTTGCGCTTAGGCGTAGCATACCACTGTCCTCCTCAACTGCAAACTCGGG
GAACTCTTGGTCAGGTAAGCATCGTTGTTCTCGTTGCGGTGAGAGACAGA
AAGTGACTTCATTGAACGGGATACATCGCTGCTGCCCGACTGTTCCATGA
TGACACATGATTATCCGCCCTGGCTTCAGACCTAAGACCATTGCGCTTCA
CAAGGCACCAGCTGCCATGTTGTTGTTGTTGTTGACGTTGCTATTGTTGT
CGAGGGACTTGTGTCCTGCTCTTGGTGTTGTTGGTGCCTGCGCCTGCTGG
GTGCGTGCACCAAATCTTCGAAAGGGAGTCTGAATATCGCATCTTCGCGC
CACATGAGAGAAACGTGTGTACAACACGCCGGTTGACCAATGTTGAGAAC
GCAGGATGTTTACATGTTCCAGGTGCAGCGGACAGCGTCACGTTTGAGCT
GGCTTGATGGTAGCAGCTCTTACATTGCTCAGGAAGCAGCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCNCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTGTGTGTGTCTG
TGTTTCCTCTATTGTTCACCACCGAATGCTGGTGCTGCGATGTACTTGCC
TTGCCCAGCACCGAACCCTCCGACTTCCGAGGTGAACTGCGTCCGCTGGT
GCACCGGAACGGGCCGTTGAAACGTGGTGCGAGTAGTCTCCCCTTTGGTC
TACCCGTAGATGGCACCCGCTAGATTTTGCGACCTATGTACTTATAGTTT
TCGCCGAGGCTGGGGTCCGTCCCCGCAGTTCCTCGTGTGGGCTACAAATG
ACCGCTAGACTAAATAGGTTTGTGTTGTAGGGTTTCTGGGTTGACCGGGC
TGCTCACCGACGGTGCTCAAATTCAAACAGCTGTTCAAGATATCGCACCG
CCTGGACCGTTTTTTCCTAAGCTCGACTGTACACTCCACGACGAAGAGGA
CATACGTATACCTCCTGGAATATATCAGACTATACGTCTCCGGAGAGCTC
TCGACGAGACGGTTCGAATGCCGCCATTGTGGGCACCGCTACTCGCTGCT
GCTGCTGCTGCGGAGTATTTTATACTTCGAGAATCGGCCCAGGATGCAGA
ATCCACCGCAGACGTGCGTCTTGTTTCTCGTCAACGCCTCCAGACTTGTT
CGCTGGCCTTTCCTCTCCCGTGTGTGCACCACAGCAGAGGCTCCATCGAT
CGGCCTGCTGTTTCCTCCCTCCGACAAGGAAAATGGAACCGGCAGGGGGC
GAGTCTCCAGCACGTGCCGCTTCGGGAGCGACGCCCAGAGGGAGCGAGAA
GGACGCCTTGCTCGGATGGGGAAGCGGCGGCAACGCCAGCAACACGATGA
TTCCTAGCACAGTGGGGAGGGGGAGGGGCAAGGGCAGCAGCAAGCTGAAG
GGGGGGTCCGGCGACCGCGGCGGGACGACCGCTTACACGAAGGGACCGCT
CGGGTCTGGCGCTAGGTCGAGGATGGCTTCCTACGACTCGGCGACTACCC
TTGGCTTACCGAGGTGTGGTGTGGTACTTGTGTGTGTTGTGTGTTTGTTT
TGCATGTTTCGTTCCTATCCGGCTGGCCAATGGAATGACGGGTCCGGCAA
ATGGCGTGGTTCGTTCCTGTCTGGCTGGCCAATGAAATGACGCCAGTCTG
TGTGCGATTGATTTGTTGTTTTGTTCTGTTGCCATCGTCAATCTCGTCGA
CTGACCCAAAGAAATAACGCTGGCGTGTGTGTTTGTTTTGCTCTATGGGT
ATCGTCCACTCCAAAACGGCTGACCAATGAAATCATGCCAGTCTCAGTGT
ATGTGGTCCCTTTGTTCTCGCACGCATTCCCCGTTGAAAATGAAACGCCG
CGAGTCTCATTTCTGCTAAAACCAGAAGCGTTGTTCTGAAAGGCCATCAT
CTGGGACGCGGTCCGGCCGGGTCACGGGGGAGGTTACGCTATTCGGACAC
GGGGGCAGATGGAGACAAACTCACGTGTGTACCGAGGCTTGTGCTCTCTA
CTCGTGTCATTGTCGTCAGCGTCCGTCGTCGTTACACTTGCTGGTACCGT
CCCTCCCAAGCCTTTCCCGCCTCACGGACCGATGTCATCGGCATCCCCCC
GATGCTGCCATGTCTGCTGTGTCTGCTTTGTCTGTGTCTTCGGCGCGGCC
TATCAATCTAGGCGCGTGTCGAGCCGGGTCCGACTGGAATCGTGGGAATT
TCCTGGATGGGGGAGCCACTTTACCATGAACCCACCGCCTGGGCTCGCCC
TGTCGAACCCTAGCAAGGACCACGGGTTAGTGATAATGGAAAATATCATG
GTTTGTGACACGCAGAGATGATCGTTGTGTATTATTAGTATCGTTCGCCC
CATCATTCGTGATTCTAGAAATGCGCACCACATGTTTCACCGGTGTTTTG
GGTAGTTGGCTTGCGACCAGGGAAGGTGTCTGCGTCAGCTGGACCGGTAG
GAATGTTGTCTGATACGGAGGAGAGACCGGAACGATTTCAATGTCAAGAC
AACAACCACCACAACATCTATTCTTGACTCCGGGCATTCCCTTTCGGAAC
GCCTTTGACGCACCAGCCGGTGGCGGTTTGGTAATCATTGGATGGGTCAG
ATCAGCCTTTTGCGCTTCTCGATACAATCAATGGGGCTACTGTATATTCG
ACACAATTGGCAGCAAGACCCATCTTGCCGAGCTGGCTTGCGACGAATAG
TATCCTATGACAAACTCCCGCTGTGTACTACTGCTTGCGTCGTTTTCGCC
TCCGTTGGAAACCACTCATACAAATTCTGCCACCGCTATGGTGTTTTTTT
TTTTTATCACACGTGGTCTTGGCAGGGGCCACGAGAAGCTGGGAGAGTGG
TATGCGACGGCAATAAGCGGAAACGACATCCTCTCGAGGTGAAGCCCAAC
GGCGGTGCTGTAGATCATTCCCGTGTCGATGCTTTTCGGTCTCGCTTGCT
GAGTGAGTTCCAATCGTGACCTGTGGTAGTTCCGCTCTCCTGAACGAATC
ACGTGTTTAGAACGTCTCAATGACCATTTTGAATGATATATTTTTCGTGG
CAGGAAGAAACAATAAATTAGCGGAAACCCTTAATGCTTCTGTATATGCA
TTTAACGCCCTAAGAGATACCTCTTTTTAGCCTCGTGTTGGGCTTCATGT
GTTTTCATTCATTTCGGAGGCGGTTGTTCCCCTTCGGTGGTTGTTCCCCT
TCCCTTCCCCTTCCCTTCCGTTCCCTGTCCTTCAGTGTGCTGTACGTGAC
CGGCCTGGTGACCGGATTCGCTGGCTGGTTATCCCCGGTGTGCCTGCTCA
TGGTCGCGGGGATTCTCTACCTCTACAGGTAAGCAAAGGCGCAAGTAGCT
CTCTCTCTCGACCTGCGATTTGTTGTGGTGACGCCAGTGTCTTTTTTTCA
AGCTCCGTCATCGAGGCTCTAACGAGGGTTACCGAAGTACCAACACTAGG
TGCTCCCTCGCTCATCTGAGTTGGAACAGTTGTCGTTTTTTTTGTCGAGA
TCGCCGACGTTGTCGTGGCTTTCGTCGTTGTCGTTGTTGCTGTTGCCGTT
GTTGCTGTTGCTCGTGAGTTATTGCTGTTGTTGTTGTTCGTAGTTTGTTG
CCGTTATCGCTGTTGGCGTCATCGTCGGTCCTGGTGTTGTTTCTTCCAGC
CCAAGGCTATCTTGTGTCCGTTCGACCACCATGCGGCGGTGCCGATCACA
CATTAGCCAGCACTCCAACACCTCATCGGTAGGACTCACGCTTCATTGGG
AGGGCAGGGCAGCAGTGAGAGCGTACGCCGTGGTCGACACGCTCTTCTTT
TGTTGTTTTCAAGGGTGCACGAAGAAACAGTTCTTGCACACCTAGATGCC
TCCTGAGGGCCTGGAGGACGCTACTCTAACACCATGTGAAAATATAGATC
CAGCGTTAGTAACGCTGCTCAACAGTACTGTGGCGTTGATGTTCGTTTCA
TGTTGACCCCCCTCTTAAGATTGTTGTTTTTCACTCTTCGTTGTGCACCT
TTGTTTTTCACCCTTTTGAACGCTTCTTTCGTGTGTGCTTGTGCTTTTCG
GCAGGTTCATTTACGGCGAAGCAATCTCTGCGTTGCCGATGAACGGCGGC
GCGTACAACGTGCTGATCAACACGACCAGCAAGCCGGTGGCCTCCTTCGC
CGCCTGCCTTGCCGTAATCTCGTACATCGCCACCGGGGTTGTCTCCGCCG
CAACCGCCATCTCCTATCTACAGGTACGTGCGTGCCCGTCTTAGCTGGTG
CAGGCTCAACATAGCACAGAGTTATTTTTCGAGCGGGCAGTCTTTCTTTG
TTTTGGATGTGTTGTTCTCGTTGGTGTTGTGGTGATTGTTGTCTTCACAT
TAAAAAACCCGTTCCGGTCTTGCTCAGTACCTTCTAATGTCCGTACCAGT
CCAACTTATACTTCCGAAACAGGCTACAGCGCCGATCAAGGATTCCATGT
TTCAATCAGCAGCCACGGCATTTTCTCCGATGTGACTAAACTGTTGCACC
TAGTTCGTGTAAAAGGCTTGGTGATGGCAGAAAGGGGGAGTGATGCGTAA
TACAGAACGCGCCACCGCTGAACAACCTGGGAGTCGAGAACTTCAGGATC
GATTTTTTTGAAAGTATGGATCTCGGCGATACGAGCAGAGCAGATACCCA
GTTTAGGCGTACCATGAACCGAACCTACGTAGTTCATTCTGGGTGACACC
TCGCAGAGTAAAGGAGAAACGAGTAGGTTCTTAGGTGCCGCCACTTGCAT
TTCGTGATAATTTTTGTGCCGCCTCTTTTTGTTGTGTCTCTTACGACGAC
GACGTTGCCCTTCCTCCTGCTGGTGGTCGTGGTGCTGCTGAAACGATCGC
TGACCGTGGTAACGGGTACATGTGACGATGTTGCCGTTCCCACTGCCGTT
GCCGCTGCTGTTGCTGTCGCTATCGCTGCTGTTGCTGCCTCTGCTGTCGC
TGCTGACGTTGTTGTCGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TCGCTGCTGCGGCTGCTGCTGATGCTGCTGCTGATGATGCTGCCTCTGTT
GTGGTGGTGGTGGTGGCGCTTTCATTGACGGCTGTGTTGCCTATTCATGA
CTCCACGCCGGCGACGTTCGTGCCGCGATACAGACGCTGATACCAGCGGC
CGGGTTGATGACATGCACCATCGGCCTTCTCTTTTTCTTCGCCTGCCTCA
TGACCATGGGTGAGAAGCGAGATCTGAATCATTTGCGGTCGAGTCAGTAT
TGGAGGCACCGGTGACACACCAGAGGGGTATTTCCTGTGTCATACCAATA
CTGCGAACAGGACAAGGCGAATTGCCCGCTGCCACTGATACCGCAACTGC
TGCTGCTGCTGCTGCTGCTGCCGTTGTATTCGCTTGCACGTGCCAGGTAT
CTCCGAGTCGGCGGGCGTAGCCTTAGGAATGTTCGTAGTCCACGTGTTTA
CACTAACGGCGGTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTGTATGGTAACA
CCCTCCCCGCGACGACCTTGCATCAACGTTGCACTACAAAGCAGTTCGCG
TTGTGTGTGATGCTGCTGTTTTTGGTGTCCTGTTTGTTCAATGGTGGAGG
GAAAGCATTCCATGCGGGGGCAGGTGCTTCTCACACCGGCAGTCTTCCCT
TCCACGGTACTACTCTAACCCCAGTGGTCGTCGTGCTTGTTTCTGTCGCT
GCTGCTGTGACGTTTTCGACCCCGTTTAGTATCGGACAACGTGCGCTCTC
CAAGCTTTGTCGCCCTGTGCTCGAACCTGGTGCTATTTTCCAACCTGACC
ACGGTTCCTTCTGGAAACGCACTCAGGATTTCCCCGCGGTGATGGTCGGC
GGCACGGTGGTGGAAGGGACCTGGGTAACCGCAATATTGTTCGGGGTCTC
CAGCGCCATGCTTGGCGTGTCGGGATTCGAGTCGTCCTCGCAGTTCGTGG
AAGAGCAGGCCAAGGGCGTCTTCGTCAAGACCCTTCGTAACATGCAGGTG
TCTTGCTGTCGTGTGAACGTAGGGTCCGTGGGTTAG

Coding sequence (CDS) from alignment at Scaffold_376:136310..142945+

>EsuBft937_9a-0001 ID=EsuBft937_9a-0001|Name=EsuBft937_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=891bp|location=Sequence derived from alignment at Scaffold_376:136310..142945+ (Ectocarpus subulatus male Bft15b)
ATGGAACCGGCAGGGGGCGAGTCTCCAGCACGTGCCGCTTCGGGAGCGAC
GCCCAGAGGGAGCGAGAAGGACGCCTTGCTCGGATGGGGAAGCGGCGGCA
ACGCCAGCAACACGATGATTCCTAGCACAGTGGGGAGGGGGAGGGGCAAG
GGCAGCAGCAAGCTGAAGGGGGGGTCCGGCGACCGCGGCGGGACGACCGC
TTACACGAAGGGACCGCTCGGGTCTGGCGCTAGGTCGAGGATGGCTTCCT
ACGACTCGGCGACTACCCTTGGCTTACCGAGGCGCGTGTCGAGCCGGGTC
CGACTGGAATCGTGGGAATTTCCTGGATGGGGGAGCCACTTTACCATGAA
CCCACCGCCTGGGCTCGCCCTGTCGAACCCTAGCAAGGACCACGGGGGCC
ACGAGAAGCTGGGAGAGTGTGTGCTGTACGTGACCGGCCTGGTGACCGGA
TTCGCTGGCTGGTTATCCCCGGTGTGCCTGCTCATGGTCGCGGGGATTCT
CTACCTCTACAGGTTCATTTACGGCGAAGCAATCTCTGCGTTGCCGATGA
ACGGCGGCGCGTACAACGTGCTGATCAACACGACCAGCAAGCCGGTGGCC
TCCTTCGCCGCCTGCCTTGCCGTAATCTCGTACATCGCCACCGGGGTTGT
CTCCGCCGCAACCGCCATCTCCTATCTACAGGATTTCCCCGCGGTGATGG
TCGGCGGCACGGTGGTGGAAGGGACCTGGGTAACCGCAATATTGTTCGGG
GTCTCCAGCGCCATGCTTGGCGTGTCGGGATTCGAGTCGTCCTCGCAGTT
CGTGGAAGAGCAGGCCAAGGGCGTCTTCGTCAAGACCCTTCGTAACATGC
AGGTGTCTTGCTGTCGTGTGAACGTAGGGTCCGTGGGTTAG