Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 1174528.JH992898_gene5443 |
| ProteomeId | EsuBft936_9 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Max annot lvl | 1117|Cyanobacteria |
| Length | 271 |
| Hectar predicted targeting category | other localisation |
| Evalue | 3.14e-06 |
| EggNOG OGs | COG4278@1|root,COG4278@2|Bacteria,1G3Y0@1117|Cyanobacteria,1JJS8@1189|Stigonemataceae |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-03_000100.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | phenylacetate-CoA ligase activity |
| COG category | H |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft936_9a-0001 ID=EsuBft936_9a-0001|Name=EsuBft936_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2710bp|location=Sequence derived from alignment at Scaffold_350:179012..183165+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TCCCGCCTCGCAAGCCCTTTTGCACTCACTGCTGCCTCTCACTCTCTCCT
CTTTCCCAAGTCTTTCGCTCATCTCTCTTCTCAGCACTCTATCATCTTCT
CCAGCGAGCAGTGCACGCAATCAAACACAGCAGTGCAAGAGAGAGATCGT
CAACATGATCGAAGAAACGCCGATGAACGCCACTGCGCTCCTGCTTCAAA
CCCGCACAAGCAGCACCGACAGCAGCGTCTCTCCCAAGCCGCGTTGGTCG
AAGGGCGTCCCTCCCACGTGCGAAAACGCAGAACCGAACAAGCCGGCTCC
CGCCGCACTTGTTTCATCGATGTCCTCGAGTGACGACGACGAGCCTTCGC
CGAACACCACCAAGCTCTTGCTTGAGAGCCACACCAGCACCGACGGCCAC
ATCTCGCCAAAGCCCCGCTGGACGCGAGGAAACCCGAACACCGAAACCGA
CACTGGAGCTGACGGTGATAAGCTGGACGAGTCCTCCTCCTCTTCCTCTA
CCACTGCCACAGTCGCATTATCCGAGGACGGACGAGAGGAACCCTTGCCG
ACCTCGCTTCGACCTGGCGGCCGCAGCAGCGGTGGCGACCGCAAGTGTTA
CATGGCCTGGAGGTGGTTGCTCGAGGACGAGGCTGCCAGCGAGCCAAGAC
TGCAGAGGCCAACCGAGTACGATCCTGTTGTGCTGCCGAAGCTGATGGAC
GCCGAGCGGGAGCTGCTGTACCGCAACGTGGAGCTCAGGTTACTGGAGGT
CGGTCGGCAATCCACGGACATCCCCGCCCTGGTTGAGGAATACCTCCGGT
TCATGTTTCTTCGGAAGAGGCTCGGGGGTATGCTCACTCTCGACCCTTCT
CCTCTGGTGGACGTTGTCTGGCAGGCTCACATCACGTTGGACAGGGCGTA
CGTCGCGTTCTGCGAGCACACGTTCGGGGGGGAGGGGCTAGAGTGCGGGG
TACTGCACAGGGAGGTCGACGCCTCGCAGCCCATGCTGTACGAGAACACG
GTCGGCTCTTACGAGCACTTCTTCGGCGCCGTTGCCCCCGCGGAGTGGTG
GCCTGCCCCCGCGGTGGTTGTTGGAACTCCGTGTACCGCGCTGGATGGCA
AGGGAGAGGAAGAAGAGGGACCCGTGGATGTCTCGGGAAGGCGAACCGCT
TTCGTCCGCACGGAGGAGAGGAAGTTTCATTTTGCCGAGGAAGGCTGAGT
CCAGCTCATGGCATGGGTATTATTGTACACGTGCAGAGGAGATTCTTAGC
GTGTGGAATTGGCTATTATTTTTTTACATTGTTCATTTTTCGCGGTATAT
ATATATATATGTAAATGCTGATGGCAGTCGACTTTCTTCTTGAGATTCGG
CTGGAGCAAAGGGAGATTGATGGAACCAGGCCGCAGTGTAGTCGTGCAGA
ATTGTTTCGTTGCTGTGTTGGCTATGAACGATTGACAAGTTTCGCTGTGA
AAAGGAACCATAACCGTAGACACTTGCAGCCTACCTTCCTTAACTTTCAT
GTGCATAGAAGAAGCTGACGTACGCCAGGAGGTCACCGATTTTCCAACCG
CAATGACCATGTCTGTCTGCCTGTACTATACGGATACATACATTGAACTT
GTTTTTGCCCCATCTGGGCTTTGTTGAATAGAATCTACTACTGCTGTAGT
CATCTTCGACGTGTTGACCGATTGTTATTGTGTGCACGGATACTATTGTT
CTTGTGTAGACTACAGAATGCGCCACCACTTGAGAAGCTCTACTTATAGT
TTCAGCCGAAGCTGCGGTTGTTACCATATTCTAGGGTCATAATACGAATG
GCCGCTATATAGGTTTTTGTGAAGGGGTTCTTCACCGAGCACACAAATGT
GCTCAAGTTCTTCAATTATGTTTGTGCATAGGCGCGTTCTGTGTGTTACA
TTTCGTTGTTGGCTTCGTGCTTGTTTTTGATGCGATGAGGAAAGGGTGGG
CGGAGAGTTGGTGGTGGGTATATTTTTTGCTTCGTCGTCGACTGCGACCT
CGTTGTTGATATAGCGGGGGGGTTGTCGGCCCAAGCTTCTTACGTACCTA
TTCGTCTAGAGGCATGTTCTGGGCTGGTGATGGGTATTTCGGTGTTGACT
TCGCCCTTGTTTTTGATGTTTTGGGGGGCAGGGGGGGGGTCGTCCGATTC
TTCGCATGTATTCGTTTGCACGAGTGCTTTGGGACTGTATAGTAGGTAGG
GTATATTTTACGGTGGGGAAGCTGGAGCCTTGATCAGCAGCGTGTGCTCT
TCATGCTAGCGGCCCAATACTTTTGGGGGTTGGATCAATTTTTTCGTTTT
CGATGTTTCTCGCGACAGGTCTCATCGAGCCTTGTGTTGTCGGGAGGCAA
ATCGCGCAGTCAGTGGTTGGAGCTCTGTTTGTTCGCGTGGTATGTATATC
TGGTAGATTCAAGAAAAGGGTCCAATGTGCACATCGGTTGGAATCTTGAT
GTTTTTTTTTTTTACGGTCTTGTACAATATGCAATGTCCTTCATAGCCGG
CCGGCGGCAATGGCCGGAAGTACCAAATATGTATGTGTAGTATCGCTGGT
GCTGGCAACGAACGAATGGATGTGCTTTGATTGGAGTTGTTTTGTGGTAC
ACAAAGAAGGTTCGGGCGGGGGTGGGTGCTCACACTTGAGTCTCATGCAT
TTCAAAGGTTTCGGGATTGAAAATCAACGACGATGCGATTACAACCACGA
TCAATTGGCG back to topprotein sequence of EsuBft936_9a-0001 >EsuBft936_9 ID=EsuBft936_9|Name=EsuBft936_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=347bp
MIEETPMNATALLLQTRTSSTDSSVSPKPRWSKGVPPTCENAEPNKPAPA
ALVSSMSSSDDDEPSPNTTKLLLESHTSTDGHISPKPRWTRGNPNTETDT
GADGDKLDESSSSSSTTATVALSEDGREEPLPTSLRPGGRSSGGDRKCYM
AWRWLLEDEAASEPRLQRPTEYDPVVLPKLMDAERELLYRNVELRLLEVG
RQSTDIPALVEEYLRFMFLRKRLGGMLTLDPSPLVDVVWQAHITLDRAYV
AFCEHTFGGEGLECGVLHREVDASQPMLYENTVGSYEHFFGAVAPAEWWP
APAVVVGTPCTALDGKGEEEEGPVDVSGRRTAFVRTEERKFHFAEEG back to topmRNA from alignment at Scaffold_350:179012..183165+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft936_9a-0001 ID=EsuBft936_9a-0001|Name=EsuBft936_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4154bp|location=Sequence derived from alignment at Scaffold_350:179012..183165+ (Ectocarpus subulatus male Bft15b)
TCCCGCCTCGCAAGCCCTTTTGCACTCACTGCTGCCTCTCACTCTCTCCT
CTTTCCCAAGTCTTTCGCTCATCTCTCTTCTCAGCACTCTATCATCTTCT
CCAGCGAGCAGTGCACGCAATCAAACACAGCAGTGCAAGAGAGAGATCGT
CAACATGATCGAAGAAACGCCGATGAACGCCACTGCGCTCCTGCTTCAAA
CCCGCACAAGCAGCACCGACAGCAGCGTCTCTCCCAAGCCGCGTTGGTCG
AAGGGCGTCCCTCCCACGTGCGAAAACGCAGAACCGAACAAGCCGGCTCC
CGCCGCACTTGTTTCATCGATGTCCTCGAGTGACGACGACGAGCCTTCGC
CGAACACCACCAAGCTCTTGCTTGAGAGCCACACCAGCACCGACGGCCAC
ATCTCGCCAAAGCCCCGCTGGACGCGAGGAAACCCGAACACCGAAACCGA
CACTGGAGCTGACGGTGATAAGCTGGACGAGTCCTCCTCCTCTTCCTCTA
CCACTGCCACAGTCGCATTATCCGAGGACGGACGAGAGGAACCCTTGCCG
ACCTCGCTTCGACCTGGCGGCCGCAGCAGCGGTGGCGACCGCAAGTGTTA
CATGGCCTGGAGGTGGTTGCTCGAGGACGAGGCTGCCAGCGAGCCAAGAC
TGCAGAGGCCAACCGAGTACGATCCTGTTGTGCTGCCGAAGCTGATGGAC
GCCGAGCGGGAGCTGCTGTACCGCAACGTGGAGCTCAGGTTACTGGAGGT
AAGCGAATTAACCGCAGTGATAGAGTACAGCAGTATGCACAGGGACCAGC
ACCACAGCAGTCTCCGCGCTTGTTGTTTTCTTGAGTCATGCGCAGAGTTG
TCAGATCTCGCCACTTTTTTGCTACTACTTGTACTCCATCCAGCTCTACC
TTCCTATAACGCATGTTGATGTATGTACCAACCAACACCTCCGACACGGG
CGGAGCTTTGCCTCGTGGCCACAGCTACTCCATCATACTGTAGCATCCCT
ACGCATGTGAAAAAAAAAGAGGTTCATGTTTTCTCATTTTCGGGGCAGCA
CCAGTTCTCCATCATGTAGACTATTACGACAAAAGACTTCCCGTTCGAGA
TCATACCTTTTGCGTCATCTGCCCAAACGGCATCCTACGCCGGAAAGACG
TCGGCCGGTGTCTAGTCTTGCAATGTAAGTTATTCTGAAAGACTTGACGC
TGCAGTATCGAGATCCACGTGTCGAACGAGGATTCTTGCCTGCCCACCTA
CAACGCCGAACCCGTCGCTTCGACGAAGCCCCCATGCCCGTATGTACATC
TGCCGTGTAATCGTTCTGTTGAGGGCGTGCGTCCGAAATGGGAGAACGAG
AGGACTGATTTGATCTCTCAAAGGTAGACACGTGCATCCGTATACTACGC
CGGCACTTCGCTGCTGCTTGTTACCATTGGTGCCCGCGCTCTGCAGAACA
TGTTATCCCGACTCCCTTTTGCAAACGAATGGGCGCGTTCATCTAGCGCA
AGTGGTCGAATGTTTATTTCAGCACCCGCCTCAAAATTATTTTGTACCTC
TTGCCACTGGTACCTCAGGTCGGTCGGCAATCCACGGACATCCCCGCCCT
GGTTGAGGAATACCTCCGGTTCATGTTTCTTCGGAAGAGGCTCGGGGGTA
TGCTCACTCTCGACCCTTCTCCTCTGGTGGACGTTGTCTGGCAGGCTCAC
ATCACGTTGGACAGGTGTGTTCCGCGGTAAAACAAATCGGTGGCCAGTAC
GATAGTACGATGCACAAACATATAATTCCGACCTTGCCTCACGACGGTCA
TTCTTGTACGTTGTGTTGTACTGGCGTCAAGTGTGGCAATCGAATAGCGG
TTGCAGGCGTGCTACAGCGCCGAAATTGATCAAGGATGTGACGACCCAAT
TATAGTCTTGCGTTTTTTTTTTGGTTTTGTCGTTACTTCAAATGAGCGCT
CACGGCACTTGCGTCCTTTACTCCAACCCGTGGTTGCAAGAGACATGCAT
CGACTCCCCCCCCCGTCCACTATCCGAAAAGGGGTGTGCAAGAGACGCCC
TCCCTTTTTTGTTCCCTGCCTTGAAGATGCAGGGAACAACCACATGCAGC
CCCTCCACTACTTGTTGCAATGCTCCTAGCACAGCATCATCCCCCACCAC
CCCTTTTATATTTCCACGCCACCCTGGACGAGAAAAGAAATGGAGGCGCT
CTTGCCACCAAACCAAAACCCACATCAACTGGGGTGGCGGAGCCAGCACT
CAAAGACCCCCCCTTCCCTTGTTCGGCCTCTGTCATGTCATACGTGTTCT
CCTTGGTGAACCTCAACAACACCCGAACATCAACTCAGGGCGTACGTCGC
GTTCTGCGAGCACACGTTCGGGGGGGAGGGGCTAGAGTGCGGGGTACTGC
ACAGGGAGGTCGACGCCTCGCAGCCCATGCTGTACGAGAACACGGTCGGC
TCTTACGAGCACTTCTTCGGCGCCGTTGCCCCCGCGGAGTGGTGGCCTGC
CCCCGCGGTGGTTGTTGGAACTCCGTGTACCGCGCTGGATGGCAAGGGAG
AGGAAGAAGAGGGACCCGTGGATGTCTCGGGAAGGCGAACCGCTTTCGTC
CGCACGGAGGAGAGGAAGTTTCATTTTGCCGAGGAAGGCTGAGTCCAGCT
CATGGCATGGGTATTATTGTACACGTGCAGAGGAGATTCTTAGCGTGTGG
AATTGGCTATTATTTTTTTACATTGTTCATTTTTCGCGGTATATATATAT
ATATGTAAATGCTGATGGCAGTCGACTTTCTTCTTGAGATTCGGCTGGAG
CAAAGGGAGATTGATGGAACCAGGCCGCAGTGTAGTCGTGCAGAATTGTT
TCGTTGCTGTGTTGGCTATGAACGATTGACAAGTTTCGCTGTGAAAAGGA
ACCATAACCGTAGACACTTGCAGCCTACCTTCCTTAACTTTCATGTGCAT
AGAAGAAGCTGACGTACGCCAGGAGGTCACCGATTTTCCAACCGCAATGA
CCATGTCTGTCTGCCTGTACTATACGGATACATACATTGAACTTGTTTTT
GCCCCATCTGGGCTTTGTTGAATAGAATCTACTACTGCTGTAGTCATCTT
CGACGTGTTGACCGATTGTTATTGTGTGCACGGATACTATTGTTCTTGTG
TAGACTACAGAATGCGCCACCACTTGAGAAGCTCTACTTATAGTTTCAGC
CGAAGCTGCGGTTGTTACCATATTCTAGGGTCATAATACGAATGGCCGCT
ATATAGGTTTTTGTGAAGGGGTTCTTCACCGAGCACACAAATGTGCTCAA
GTTCTTCAATTATGTTTGTGCATAGGCGCGTTCTGTGTGTTACATTTCGT
TGTTGGCTTCGTGCTTGTTTTTGATGCGATGAGGAAAGGGTGGGCGGAGA
GTTGGTGGTGGGTATATTTTTTGCTTCGTCGTCGACTGCGACCTCGTTGT
TGATATAGCGGGGGGGTTGTCGGCCCAAGCTTCTTACGTACCTATTCGTC
TAGAGGCATGTTCTGGGCTGGTGATGGGTATTTCGGTGTTGACTTCGCCC
TTGTTTTTGATGTTTTGGGGGGCAGGGGGGGGGTCGTCCGATTCTTCGCA
TGTATTCGTTTGCACGAGTGCTTTGGGACTGTATAGTAGGTAGGGTATAT
TTTACGGTGGGGAAGCTGGAGCCTTGATCAGCAGCGTGTGCTCTTCATGC
TAGCGGCCCAATACTTTTGGGGGTTGGATCAATTTTTTCGTTTTCGATGT
TTCTCGCGACAGGTCTCATCGAGCCTTGTGTTGTCGGGAGGCAAATCGCG
CAGTCAGTGGTTGGAGCTCTGTTTGTTCGCGTGGTATGTATATCTGGTAG
ATTCAAGAAAAGGGTCCAATGTGCACATCGGTTGGAATCTTGATGTTTTT
TTTTTTTACGGTCTTGTACAATATGCAATGTCCTTCATAGCCGGCCGGCG
GCAATGGCCGGAAGTACCAAATATGTATGTGTAGTATCGCTGGTGCTGGC
AACGAACGAATGGATGTGCTTTGATTGGAGTTGTTTTGTGGTACACAAAG
AAGGTTCGGGCGGGGGTGGGTGCTCACACTTGAGTCTCATGCATTTCAAA
GGTTTCGGGATTGAAAATCAACGACGATGCGATTACAACCACGATCAATT
GGCG back to topCoding sequence (CDS) from alignment at Scaffold_350:179012..183165+ >EsuBft936_9a-0001 ID=EsuBft936_9a-0001|Name=EsuBft936_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1044bp|location=Sequence derived from alignment at Scaffold_350:179012..183165+ (Ectocarpus subulatus male Bft15b)
ATGATCGAAGAAACGCCGATGAACGCCACTGCGCTCCTGCTTCAAACCCG
CACAAGCAGCACCGACAGCAGCGTCTCTCCCAAGCCGCGTTGGTCGAAGG
GCGTCCCTCCCACGTGCGAAAACGCAGAACCGAACAAGCCGGCTCCCGCC
GCACTTGTTTCATCGATGTCCTCGAGTGACGACGACGAGCCTTCGCCGAA
CACCACCAAGCTCTTGCTTGAGAGCCACACCAGCACCGACGGCCACATCT
CGCCAAAGCCCCGCTGGACGCGAGGAAACCCGAACACCGAAACCGACACT
GGAGCTGACGGTGATAAGCTGGACGAGTCCTCCTCCTCTTCCTCTACCAC
TGCCACAGTCGCATTATCCGAGGACGGACGAGAGGAACCCTTGCCGACCT
CGCTTCGACCTGGCGGCCGCAGCAGCGGTGGCGACCGCAAGTGTTACATG
GCCTGGAGGTGGTTGCTCGAGGACGAGGCTGCCAGCGAGCCAAGACTGCA
GAGGCCAACCGAGTACGATCCTGTTGTGCTGCCGAAGCTGATGGACGCCG
AGCGGGAGCTGCTGTACCGCAACGTGGAGCTCAGGTTACTGGAGGTCGGT
CGGCAATCCACGGACATCCCCGCCCTGGTTGAGGAATACCTCCGGTTCAT
GTTTCTTCGGAAGAGGCTCGGGGGTATGCTCACTCTCGACCCTTCTCCTC
TGGTGGACGTTGTCTGGCAGGCTCACATCACGTTGGACAGGGCGTACGTC
GCGTTCTGCGAGCACACGTTCGGGGGGGAGGGGCTAGAGTGCGGGGTACT
GCACAGGGAGGTCGACGCCTCGCAGCCCATGCTGTACGAGAACACGGTCG
GCTCTTACGAGCACTTCTTCGGCGCCGTTGCCCCCGCGGAGTGGTGGCCT
GCCCCCGCGGTGGTTGTTGGAACTCCGTGTACCGCGCTGGATGGCAAGGG
AGAGGAAGAAGAGGGACCCGTGGATGTCTCGGGAAGGCGAACCGCTTTCG
TCCGCACGGAGGAGAGGAAGTTTCATTTTGCCGAGGAAGGCTGA back to top
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