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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft932_6 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 407 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft932_6a-0001 ID=EsuBft932_6a-0001|Name=EsuBft932_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4079bp|location=Sequence derived from alignment at Scaffold_489:639337..644275- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CTCCTAGCATTCGTGGAAGATACCGAAAAGAAATCATCTCCATGCACCGC CGGCGTGTGCGCGAACGCACGCTTGTCCAACACATCCCACATATCATCCA GACACGAAGCATGTTGCCAAAAGGGGCTTCCATGGAGAGCTGCTCATCCT TGTACACTTGCCCAGACACTACCAGAAACTGCTTCGACATGGAGTCTCGA ACAGCTATCTGCACTTGCGCATCCGAAGGCTTCAACGCGTGGTGAGAATT NCTTGAGTGTCCCAGGCGGCCGCCAATTTCTGGATGAAGAAGGCGTACGT CGAGGGCCCTGCCGGTTCCTTGCGCAGATGGTTTTCTACCTGTAGGAAGG TGGCATCAAGAAATTCCAGCGTGGCACGGTTGGTGGTTTGGCATTCCACG ACAGCAGCACGGACACGTTGGCGCAACAACGGAAGCCATCCGGTGACCCA GGTGGAGGTACTGAAAGTCTGCTTGCGCTTGACGTCGCTTTTGATCTCTG TGACCACACCCTTGCAGCTAGACGCGAAACGAGCAAATTATTCAGGATCA GGACCGAGGGACAAGCGTGTGACACTATCAAGTTGTTCCGGCTTCAGCTT GTCCATCTTGTCTTGAATGCGGATGGTGCCGGCCTCCGCTGCAGCGGCAT CCGCAGCGTCCCGAGCCTCCTGCCTCGCTCTCGCTCCCGTGGAAGACAAA GGCAAACCAGCATCGTCCTGAGTCAACGGCGATATCGCTTGACCCGGTGG CTCGACGATGTGGCCGGTCGCAGAGCTAGGATCAATCAGAATAGACCCAC GCTGGAGGGGGGAGGGCGATATCACAAAAGGCTGTTGCAACAGGGCTGGG GCTGCCGACGCTGATGGTACCACCGCAGGCTCGACCGGTACTGTCGCCGA CATCGTGGCGGATGACGATGATCCTGGCGTGGCCCTGGCAGCGGTTTCGG CACGAACATCGCGCCCTACAGGAGCTCCCGAAAAGCTCGAAGCGTGGTCT TGCAGCGGTGTCAGATGCGTTCGTGGGGAAAAAGATGGGGCAGGTGGTGG CACGCTAGGAGCGTGGGAGGGCACAGGAGGTTGTACATTCGCGTCGGCAG CAGCATCCACAACTTGATTTGCTCGCAGGAGCGTGAGCACTTGTTCCAAC AGCATTTCAGTACGGGAAGCCGAAGTCGAGGCGTGTGATGCACCATGGCG TGGTGACTCATCACGTTCGTCCAAAGGCAAGGAAGATGTGGGATGATCCA TAACGGCATGGGCAGGGGCATGGCTTTTCACAGCGGCTGAACGTTCACGA AGTTGCATGTTGGCAAGTTTGAACGCCGAAGCAGACATGGTCGGTTGGCC TACATCAGCGGGGGGGCGTAGAACAAGCGGTGAAGAACAGAGAGAACCGT CTTCTGAAGCATCCTTGTTTTCCCCCAACAACCCAGAGCTACGAAAACCA CCCCGATCATGCATCACTTGCCTGTTACCGTGGCCTGACTTCCGTCCCCC TTTTCCGCCTCGACCGCTGTCAGTGCTGGTCACCCTGCTGTTGCCCCCGC TCCGATTTTGGCTCCGGCTGCGGCTTCGCCTAGACGGAGGCGTATTTGTC CCACGACGGTCTTCGCTCCGGCTGCGCCCACGCCTAGACGAAAGATTGGT GCGCTGTTGACGTTCTGCACTCCGACTCCTGCTCTGGCGGTGGCGGCTCG CCGGCGAAGACCTGGTAGGCTGGTTCCCCGCGGTTTGCCCTCGCCCGCCA TCTCCGGTGCCGCCCCCTCGCGAAGACTGGGTGGAGCGGCGGTTGTCGTC GGTCCCGCTCTTGGTGGTCGAATCTTGGTCACCCCAACGGTTCTTCCAGC TCTTAGACGCAGGAGCCACCGACCGACTGTAGTTCTTGTCCCCTCCAGAA CCATGTGCAGGGCGTGAAGAGGCCTGCCGGGGGGCTTGCAGATCGTGCTT GAAATCGTTGTTTGAGGCAGCACGAGCAAGAGGCAGCTGGAGTCCTCCAT CATGGGCCACCACCGACGCTCCTTGAGGACCGCTCGTAATAGAGGCACGA CGGAGAGCGAACAAAAGCCGGAACACGGACTGCCGAGGAGAAGGCGGAAG TTTCGCGATGTAGGGGGCAGAATAAATGTGCCCGAAAGCAACGGTGTGAG AGTGGGGAAACTGAGCACGGACGAGGTGCTTGACTCCAGCCCATGCAAAA AGAGCTGCCAGTTTACCCTCATCGTGGAAAGTTGAGTCTTCGGCTGGCAT CTCCAGTGGGCGGGGCAGGAACGCTGTATCGCCAACATGGAACTCGTACC CCGCGGCTGCGGCCGCAGTCGATGCCCCGTCTTCACCGGCCGGACGACTC AACGTCACAGAAAACTCCGGAGTAGCCACCACCTCCCGCCCGTTCTCCTT CGCCACAGAAGCACGCTGCGATTGAAATTGGAGGGGGGCAACAACACGAC GATGGGGAGGGGGCGAGGGCAAGGCCGCTGCGTGCGGGCCATGGGGGCGG AACTCGAGGTGGTCCAGCCGTGATCGGAGCGCCCCCTGCTTCGCCATAGC AGCTTGAACGTACGCCTGGCGCTCCGCCAGCTCAGCTTTACGATCCTCCT CCTGCTTCCGTGGTGCCGCCAGAGCATCCTGCAATCCTGCCGCTGACGCT AAGTGTAAAGTTGGTGAAGCCGTGGGCGGTAGCTTGCTCCTGGAGATGGA TGAAGGTTCTGTCGTTGTCACGCTTGTCCACGAGCACGCTGAGATGGGAA AGTTGCTTGTTATTGCCGAGAGACGATCAGCAAGGGTCTGAGATGGAGTG GGGATCCAACTTCATCTCAGGGGGTACACAGAGTAGACAATTCTAAGGGG GTAGGGGTCAGAAGGGTATACTTCCTGACCGACCCGCATCCTATCAACAA TAAGATGTATCCGATTCATGCTAGCAGCCACACTCCTTAATACTTGGCTC TGCTTGCGTTGTGAAGTACAAAGATTGAACCAAGGGGGTGTACCTCTTTT TCTCTGGCCCGTGATGCTGACTCCTAGTCTCAGTTGGTACCTCGCATAGC GCGCAGAGGGAGCGGAGGAATCAAGAATATCTGTCATCAATTTCTATTGA CCTGCGGACCCCTCGGGGCCAGTTAATTTGAGTGTTTCTTTTTGAGGGGT ATCCGTCGATTGACTTTTACCTGAACCGGTACACCTTCGCATATGGCATC AGCGGCAGGATACTAGTTCGAATCTCCTTGGGTGCACACTTTTTCTCCTG ACTTGGACATTTTCCCAGGGACACAATGTGTGTCAGTCCTGAGAACGCCT CTGGAGTCGATCCTAAAAAGAACCTTGTGACATTTCCATCGAATTACCCA TCCTGGCTACAAGAGGTTCCCAGTTGAGGGTAGATTTTGTGGGTGGAGAG TGTTAAGGAGGACCCGATTCGCAGGGTATCCGTCGATCGACTTTTACCTG AATCGGTACACCTTCGCACAGCACAGAGGAAGAACGGAAGAACCGTCGCC ATCAAAGCAAATAGTATTACTTTGATCAGGAGGTTCTCTCAAACGAAGAT AATCCTCCGCAATTCATCTGGGTTTTTAGGCCCATGTTTATGGTCACCAA ATCTTCGGAAAAAAACTTCACACGTTTCCAAACATTTGCGTGCGAATATT TGTCAGAGGAAGATTTGAGTACCGCTGTTATGGGAACGAGAAAAAAAACT TCGGCGGGACTGTGAGTTTCGGAGGCGTTTTGGTTCATTTTCATAAAGCA CGCGGCGCGGGGCCTCCTTCTCTCTCACGAGCAACACGCGCACACCAGCT GGCGCACACAACTGCTGTAGTTATCACTTTCCACGCCCACACACATACAC ATTGTCACCGTGTATGGAACGGTTGAGCCGACCCCATTCCCTGGTCTGCG CGAAGACCGGCGCCTCAACCTTCCTGCACAATAGGATGGTTCGCGTGCTG TTAAAGACATTACGCGAATGCCACATGCCAATCGCTGTTGAAGACTCTTC CCCATTTACTACAGGCACTGGTAGGGGAAGAGGGCTCTACAAGATGGATT TAGTGATCCCCCCAGGATTACACGCAGGA back to topprotein sequence of EsuBft932_6a-0001 >EsuBft932_6 ID=EsuBft932_6|Name=EsuBft932_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=67bp
MHRRRVRERTLVQHIPHIIQTRSMLPKGASMESCSSLYTCPDTTRNCFDM ESRTAICTCASEGFNAW back to topmRNA from alignment at Scaffold_489:639337..644275- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft932_6a-0001 ID=EsuBft932_6a-0001|Name=EsuBft932_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4939bp|location=Sequence derived from alignment at Scaffold_489:639337..644275- (Ectocarpus subulatus male Bft15b) CTCCTAGCATTCGTGGAAGATACCGAAAAGAAATCATCTCCATGCACCGC
CGGCGTGTGCGCGAACGCACGCTTGTCCAACACATCCCACATATCATCCA
GACACGAAGCATGTTGCCAAAAGGGGCTTCCATGGAGAGCTGCTCATCCT
TGTACACTTGCCCAGACACTACCAGAAACTGCTTCGACATGGAGTCTCGA
ACAGCTATCTGCACTTGCGCATCCGAAGGCTTCAACGCGTGGTGAGAATT
NCTTGAGTGTCCCAGGCGGCCGCCAATTTCTGGATGAAGAAGGCGTACGT
CGAGGGCCCTGCCGGTTCCTTGCGCAGATGGTTTTCTACCTGTAGGAAGG
TGGCATCAAGAAATTCCAGCGTGGCACGGTTGGTGGTTTGGCATTCCACG
ACAGCAGCACGGACACGTTGGCGCAACAACGGAAGCCATCCGGTGACCCA
GGTGGAGGTACTGAAAGTCTGCTTGCGCTTGACGTCGCTTTTGTTGAGGA
TCTCTGTGACCACACCCTTGCAGCTAGACGCGAAACGAGCAAATTATTCA
GGATCAGGACCGAGGGANTAGGAAGGTGGCATCAAGAAATTCCAGCGTGG
CACGGTTGGTGGTTTGGCATTCCACGACAGCAGCACGGACACGTTGGCGC
AACAACGGAAGCCATCCGGTGACCCAGGTGGAGGTACTGAAAGTCTGCTT
GCGCTTGACGTCGCTTTTGTTGAGGATCTCTGTGACCACACCCTTGCAGC
TAGACGCGAAACGAGCAAATTATTCAGGATCAGGACCGAGGGACAAGCGT
GTGACACTATCAAGTTGTTCCGGCTTCAGCTTGTCCATCTTGTCTTGAAT
GCGGATGGTGCCGGCCTCCGCTGCAGCGGCATCCGCAGCGTCCCGAGCCT
CCTGCCTCGCTCTCGCTCCCGTGGAAGACAAAGGCAAACCAGCATCGTCC
TGAGTCAACGGCGATATCGCTTGACCCGGTGGCTCGACGATGTGGCCGGT
CGCAGAGCTAGGATCAATCAGAATAGACCCACGCTGGAGGGGGGAGGGCG
ATATCACAAAAGGCTGTTGCAACAGGGCTGGGGCTGCCGACGCTGATGGT
ACCACCGCAGGCTCGACCGGTACTGTCGCCGACATCGTGGCGGATGACGA
TGATCCTGGCGTGGCCCTGGCAGCGGTTTCGGCACGAACATCGCGCCCTA
CAGGAGCTCCCGAAAAGCTCGAAGCGTGGTCTTGCAGCGGTGTCAGATGC
GTTCGTGGGGAAAAAGATGGGGCAGGTGGTGGCACGCTAGGAGCGTGGGA
GGGCACAGGAGGTTGTACATTCGCGTCGGCAGCAGCATCCACAACTTGAT
TTGCTCGCAGGAGCGTGAGCACTTGTTCCAACAGCATTTCAGTACGGGAA
GCCGAAGTCGAGGCGTGTGATGCACCATGGCGTGGTGACTCATCACGTTC
GTCCAAAGGCAAGGAAGATGTGGGATGATCCATAACGGCATGGGCAGGGG
CATGGCTTTTCACAGCGGCTGAACGTTCACGAAGTTGCATGTTGGCAAGT
TTGAACGCCGAAGCAGACATGGTCGGTTGGCCTACATCAGCGGGGGGGCG
TAGAACAAGCGGTGAAGAACAGAGAGAACCGTCTTCTGAAGCATCCTTGT
TTTCCCCCAACAACCCAGAGCTACGAAAACCACCCCGATCATGCATCACT
TGCCTGTTACCGTGGCCTGACTTCCGTCCCCCTTTTCCGCCTCGACCGCT
GTCAGTGCTGGTCACCCTGCTGTTGCCCCCGCTCCGATTTTGGCTCCGGC
TGCGGCTTCGCCTAGACGGAGGCGTATTTGTCCCACGACGGTCTTCGCTC
CGGCTGCGCCCACGCCTAGACGAAAGATTGGTGCGCTGTTGACGTTCTGC
ACTCCGACTCCTGCTCTGGCGGTGGCGGCTCGCCGGCGAAGACCTGGTAG
GCTGGTTCCCCGCGGTTTGCCCTCGCCCGCCATCTCCGGTGCCGCCCCCT
CGCGAAGACTGGGTGGAGCGGCGGTTGTCGTCGGTCCCGCTCTTGGTGGT
CGAATCTTGGTCACCCCAACGGTTCTTCCAGCTCTTAGACGCAGGAGCCA
CCGACCGACTGTAGTTCTTGTCCCCTCCAGAACCATGTGCAGGGCGTGAA
GAGGCCTGCCGGGGGGCTTGCAGATCGTGCTTGAAATCGTTGTTTGAGGC
AGCACGAGCAAGAGGCAGCTGGAGTCCTCCATCATGGGCCACCACCGACG
CTCCTTGAGGACCGCTCGTAATAGAGGCACGACGGAGAGCGAACAAAAGC
CGGAACACGGACTGCCGAGGAGAAGGCGGAAGTTTCGCGATGTAGGGGGC
AGAATAAATGTGCCCGAAAGCAACGGTGTGAGAGTGGGGAAACTGAGCAC
GGACGAGGTGCTTGACTCCAGCCCATGCAAAAAGAGCTGCCAGTTTACCC
TCATCGTGGAAAGTTGAGTCTTCGGCTGGCATCTCCAGTGGGCGGGGCAG
GAACGCTGTATCGCCAACATGGAACTCGTACCCCGCGGCTGCGGCCGCAG
TCGATGCCCCGTCTTCACCGGCCGGACGACTCAACGTCACAGAAAACTCC
GGAGTAGCCACCACCTCCCGCCCGTTCTCCTTCGCCACAGAAGCACGCTG
CGATTGAAATTGGAGGGGGGCAACAACACGACGATGGGGAGGGGGCGAGG
GCAAGGCCGCTGCGTGCGGGCCATGGGGGCGGAACTCGAGGTGGTCCAGC
CGTGATCGGAGCGCCCCCTGCTTCGCCATAGCAGCTTGAACGTACGCCTG
GCGCTCCGCCAGCTCAGCTTTACGATCCTCCTCCTGCTTCCGTGGTGCCG
CCAGAGCATCCTGCAATCCTGCCGCTGACGCTAAGTGTAAAGTTGGTGAA
GCCGTGGGCGGTAGCTTGCTCCTGGAGATGGATGAAGGTTCTGTCGTTGT
CACGCTTGTCCACGAGCACGCTGAGATGGGAAAGTTGCTTGTTATTGCCG
AGAGACGATCAGCAAGGGTCTGAGATGGAGTGGGGATCCAACTTCATCTC
AGGGGGTACACAGAGTAGACAATTCTAAGGGGGTAGGGGTCAGAAGGGTA
TACTTCCTGACCGACCCGCATCCTATCAACAATAAGATGTATCCGATTCA
TGCTAGCAGCCACACTCCTTAATACTTGGCTCTGCTTGCGTTGTGAAGTA
CAAAGATTGAACCAAGGGGGTGTACCTCTTTTTCTCTGGCCCGTGATGCT
GACTCCTAGTCTCAGTTGGTACCTCGCATAGCGCGCAGAGGGAGCGGAGG
AATCAAGAATATCTGTCATCAATTTCTATTGACCTGCGGACCCCTCGGGG
CCAGTTAATTTGAGTGTTTCTTTTTGAGGGTAAGTTAGCCTGCGACCACG
GGAATCGACCGCGTCGAGTGCTGGATCAGTATACGTATGGTTTTTGACGT
GAATAAAACAACAACAATCCATATGTATGTGTAGTATCCACGATTGTCCG
CAACAAACAAAGAAAAGTTCCGTTAGAAACGAGCAGCTGTTAAGGAGGAG
AGGAGGACCCGATTCGCAGGGTATCCGTCGATTGACTTTTACCTGAACCG
GTACACCTTCGCATATGGCATCAGCGGCANAAGTTAGCCTGCGACCACGG
GAATCGACCGCGTCGAGTGCTGGATCAGTATACGTATGGTTTTTGACGTG
AATAAAACAACAACAATCCATATGTATGTGTAGTATCCACGATTGTCCGC
AACAAACAAAGAAAAGTTCCGTTAGAAACGAGCAGCTGTTAAGGAGGAGA
GGAGGACCCGATTCGCAGGGTATCCGTCGATTGACTTTTACCTGAACCGG
TACACCTTCGCATATGGCATCAGCGGCAGGATACTAGTTCGAATCTCCTT
GGGTGCACACTTTTTCTCCTGACTTGGACATTTTCCCAGGGACACAATGT
GTGTCAGTCCTGAGAACGCCTCTGGAGTCGATCCTAAAAAGAACCTTGTG
ACATTTCCATCGAATTACCCATCCTGGCTACAAGAGGTTCCCAGTTGAGG
GTAGATTTTGTGGGTGGAGAGTGTTAAGGAGGACCCGATTCGCAGGGTAT
CCGTCGATCGACTTTTACCTGAATCGGTACACCTTCGCACAGCACAGAGG
AAGAACGGAAGAACCGTCGCCATCAAAGCAAATAGTATTACTTTGATCAG
GAGGTTTGTAGGAGAGGTGCGAACACAGGCTTCTCCCGTTCCATATATAG
AAGCTGGGCCAGCCAAGAAGCTAACATTCAGTCGTCCAGCCATATATCTT
GAAGGAATCAGAATTGGAACGAGCTCGGCATATCTGCTCAATCAGCCAAT
CACAGCGGATTTGCCCATGCCTCTAGAAATCGTGTTAGACAGGTTCTCTC
AAACGAAGATAATCCTCCGCAATTCATCTGGGTTTTTAGGCCCATGTTTA
TGGTCACCAAATCTTCGGAAAAAAACTTCACACGTTTCCAAACATTTGCG
TGCGAATATTTGTCAGAGGAAGATTTGAGTACCGCTGTTATGGGAACGAG
AAAAAAAACTTCGGCGGGACTGTGAGTTTCGGAGGCGTTTTGGTTCATTT
TCATAAAGCACGCGGCGCGGGGCCTCCTTCTCTCTCACGAGCAACACGCG
CACACCAGCTGGCGCACACAACTGCTGTAGTTATCACTTTCCACGCCCAC
ACACATACACATTGTCACCGTGTATGGAACGGTTGAGCCGACCCCATTCC
CTGGTCTGCGCGAAGACCGGCGCCTCAACCTTCCTGCACAATAGGATGGT
TCGCGTGCTGTTAAAGACATTACGCGAATGCCACATGCCAATCGCTGTTG
AAGACTCTTCCCCATTTACTACAGGCACTGGTAGGGGAAGAGGGCTCTAC
AAGATGGATTTAGTGATCCCCCCAGGATTACACGCAGGA back to topCoding sequence (CDS) from alignment at Scaffold_489:639337..644275- >EsuBft932_6a-0001 ID=EsuBft932_6a-0001|Name=EsuBft932_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=204bp|location=Sequence derived from alignment at Scaffold_489:639337..644275- (Ectocarpus subulatus male Bft15b) ATGCACCGCCGGCGTGTGCGCGAACGCACGCTTGTCCAACACATCCCACA TATCATCCAGACACGAAGCATGTTGCCAAAAGGGGCTTCCATGGAGAGCT GCTCATCCTTGTACACTTGCCCAGACACTACCAGAAACTGCTTCGACATG GAGTCTCGAACAGCTATCTGCACTTGCGCATCCGAAGGCTTCAACGCGTG GTGA back to top
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