EsuBft929_4a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft929_4a-0001
Unique NameEsuBft929_4a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_620contigScaffold_620:38759..42941 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D8LIK7
ProteomeIdEsuBft929_4
Protein domainsIPR020636
Protein domainsIPR011009
Protein domainsIPR017441
Protein domainsIPR000719
Protein domainsIPR002290
Protein domainsPTHR24347
Protein domainsG3DSA
Protein domainsIPR008271
Ownerapollo_admin@sb-roscoff.fr
Notecalcium calmodulin-dependent protein kinase kinase 2 os:rattus norvegicus gn:camkk2 pe:1 sv:1 [Automatic annotation]
Nb exon5
Max annot lvl2759|Eukaryota
Length1422
Hectar predicted targeting categoryother localisation
Evalue6.99e-205
EggNOG OGsCOG0631@1|root,KOG0585@1|root,KOG0585@2759|Eukaryota,KOG0698@2759|Eukaryota
Ec32 ortholog descriptionCa2 /calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases
Ec32 orthologEc-18_003250.1
Date last modified2016-06-14
Date creation2016-06-14
Preferred namespnA
KEGG koko:K01090,ko:K07359,ko:K14803,ko:K17500
KEGG Pathwayko04140,ko04152,ko04211,ko04920,ko04921,ko05034,map04140,map04152,map04211,map04920,map04921,map05034
GOsGO:0000166,GO:0000287,GO:0001101,GO:0001726,GO:0001882,GO:0001883,GO:0002682,GO:0002697,GO:0002831,GO:0003674,GO:0003824,GO:0004721,GO:0004722,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009414,GO:0009415,GO:0009628,GO:0009651,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009889,GO:0009987,GO:0010033,GO:0010035,GO:0010468,GO:0010556,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017076,GO:0019001,GO:0019219,GO:0019222,GO:0019538,GO:0030145,GO:0030154,GO:0031252,GO:0031323,GO:0031326,GO:0031347,GO:0032101,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033554,GO:0033993,GO:0035639,GO:0036094,GO:0036211,GO:0042221,GO:0042578,GO:0042995,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043618,GO:0043620,GO:0043900,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048583,GO:0048856,GO:0048869,GO:0050688,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061392,GO:0061416,GO:0065007,GO:0071214,GO:0071470,GO:0071472,GO:0071704,GO:0080090,GO:0080134,GO:0097159,GO:0097305,GO:0097367,GO:0104004,GO:0120025,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901700,GO:1903506,GO:2000112,GO:2001141
EC2.7.11.17,3.1.3.16
Descriptionprotein serine/threonine phosphatase activity
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001,ko01009,ko03009
Cross References
External references for this mRNA
DatabaseAccession
GO0031227
GO0005524
EC2.7.11
GO0050896
GO0005737
GO0007154
GO0045860
GO0044710
GO0004674
GO0044700
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft929_4aEsuBft929_4aEctocarpus subulatus male Bft15bgeneScaffold_620 38759..42941 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft929_4a-0001EsuBft929_4Ectocarpus subulatus male Bft15bpolypeptideScaffold_620 38759..42941 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft929_4a-0001-exonagat-exon-100173Ectocarpus subulatus male Bft15bexonScaffold_620 38759..38868 +
EsuBft929_4a-0001-exonEsuBft929_4a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_620 39409..39679 +
EsuBft929_4a-0001-exonagat-exon-100170Ectocarpus subulatus male Bft15bexonScaffold_620 40381..40575 +
EsuBft929_4a-0001-exonagat-exon-100171Ectocarpus subulatus male Bft15bexonScaffold_620 41046..41401 +
EsuBft929_4a-0001-exonagat-exon-100172Ectocarpus subulatus male Bft15bexonScaffold_620 42452..42941 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft929_4a-0001-cdsEsuBft929_4a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_620 38759..38868 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft929_4a-0001 ID=EsuBft929_4a-0001|Name=EsuBft929_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1422bp|location=Sequence derived from alignment at Scaffold_620:38759..42941+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGAACGAGAAACGGTTCCAGGAGGTGTTGGAGGAGGTGGCGTACCAGCG
GGCCTTTTACCGTGAGCAGCGAGCTCAGCAGCTGGAGGAGGAACAGGAAA
AGCAGGTGTGCGGGGTGGGGAAGCCCGGAGGAAGGGGAAGATGGACGACG
GCAGAGGTCAGGGGGGTCTCGCCCACCAGGAGCTTGACGCCCCCTTGCGG
CCAGTCCGCGAGCTCGTCATCGCACTCGCTTCGAAGGTCGAGCTTCCGCG
AGACCGTCAAGGTAGTGAAGCGCAAGCTCAACAACGGAACCATCATCATC
AACAAGTACCGCATCATCTGCGAGCTCGGGAAAGGCTCGTACGGGTCGGT
ACACCTTTGCCGGGACGGGGAAACAGGCATTGAGTACGCGATGAAGGTCA
TTGACAAGCGGAAGCGCGGCGGCATGCGGTCGAGGCAGGGGCAGGGCGGC
CATCAGCACCTGGCCGAGACGCTGAGGCGCGAGGTGGCGGTGATGAAGAA
GCTGAGGCACCCGAACATCGTGACCCTGTGGGAAGTTATCGATGACCCCA
AGGCGCAGCAGCTCTACATGATCCAGGAGTATGTCGCGGATGGCCCGCTT
CTTCCCGAGGGCGTCGTGGTTTCGCCCATGGACACAGAGGAGGCTCGAGA
CAAGTTCGTCGGCTGCATCCGTGGTCTCCACCACCTCCACCAGCACGGAG
TGGTGCACGGCGACATCAAGCCCCAAAACCTGCTCGTGGCCAAGGACGGG
ACTGTCAAGATTGCCGACTTCGGCGCCGCCGTCATGCTGCAGAGCCAGGC
AAGTGCGGGGAACAACAACAACATCGGTGTCTTCGTGTTGATGGTGTTTT
TTTCGAGGCTTTGGGTAGCGTCCCTGTCGGGCAAGTGGGGTAGCAGCAGC
ATCGGTACCTCCTCAGCAATTTCGTGTCGATGCCCGGCCTGCGACGTGTG
GGCGATGGGCGTCACCCTCTACCAGATGGTCTACGGCACCTTGCCCTTCT
GGCCCCCCTCGGGCAATCACTCCGAGCTCGAGATCATGGTCACCCACAGG
GAGCTCTCCTTCCCTTCCCCCTCGTCCTCCTCTCCCTCATCGGTGGCTGC
CCTAGAGGGCGCGGGGGGCACCGGCATCGGGGTCAGGGGTGGCGCCGCCG
GTGCGGGCGTGGGGTGTGGGGGAGCCGGTGGTAGCGGCGGTGGTTTGGTG
GCAGCGGAGGCCGCGACGGTGGCGGACGAGCCAGACTTGAAGAACGGGAC
GAGGACGCTGTCGTCCGGGGTCTTGACCAACCTCGTGGCTTACGACCCCA
TGGTCGGCTACTTACGGGTGAGTTTTGAGGCTTCGGAGAAGTGTCGAAGT
GTTGCGGGCGAAGCTTCCGAGACGAGGGATGTGTTTGTTAGGAGTTTCGA
GCGACACGTATGCGTCCAGTAG
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protein sequence of EsuBft929_4a-0001

>EsuBft929_4 ID=EsuBft929_4|Name=EsuBft929_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=473bp
MNEKRFQEVLEEVAYQRAFYREQRAQQLEEEQEKQVCGVGKPGGRGRWTT
AEVRGVSPTRSLTPPCGQSASSSSHSLRRSSFRETVKVVKRKLNNGTIII
NKYRIICELGKGSYGSVHLCRDGETGIEYAMKVIDKRKRGGMRSRQGQGG
HQHLAETLRREVAVMKKLRHPNIVTLWEVIDDPKAQQLYMIQEYVADGPL
LPEGVVVSPMDTEEARDKFVGCIRGLHHLHQHGVVHGDIKPQNLLVAKDG
TVKIADFGAAVMLQSQASAGNNNNIGVFVLMVFFSRLWVASLSGKWGSSS
IGTSSAISCRCPACDVWAMGVTLYQMVYGTLPFWPPSGNHSELEIMVTHR
ELSFPSPSSSSPSSVAALEGAGGTGIGVRGGAAGAGVGCGGAGGSGGGLV
AAEAATVADEPDLKNGTRTLSSGVLTNLVAYDPMVGYLRVSFEASEKCRS
VAGEASETRDVFVRSFERHVCVQ
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mRNA from alignment at Scaffold_620:38759..42941+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft929_4a-0001 ID=EsuBft929_4a-0001|Name=EsuBft929_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4183bp|location=Sequence derived from alignment at Scaffold_620:38759..42941+ (Ectocarpus subulatus male Bft15b)
ATGAACGAGAAACGGTTCCAGGAGGTGTTGGAGGAGGTGGCGTACCAGCG
GGCCTTTTACCGTGAGCAGCGAGCTCAGCAGCTGGAGGAGGAACAGGAAA
AGCAGGTGTGGTTGTCGTTGTCGTCGTCGTCGTCGTTTTGGGGAGGTGAT
GTTGCTGCCGCCACTCTGTCCGCCGGACAGTCGTGTTGACGCTCTTGCAT
TTTCTTCGTTTTTCCCGAGTATGGTGAGTTTAAGCGACAGTCAGCAGCTG
CTTAGCACACACAGGCGTGTTTGTGGGTACGTATGTGTCATCAACAAGGA
ATACATTGGCGTCCTATAACACACGGAAGGCCCTGCAAGCTCCACACGAA
AAAAGAAACCACCCAGACACCGTCTCGATGCCACTAGAGGAAACCAGGCA
CTCGCAGGGCGGACGGACTCTAGGAAACGACGGATTGCAAAGTGGTCACG
GCTTTGGATGAGTTGCTAACCCCCCCCCCCCCCCCCCCCCCCCCCCCNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCCCCCCCCGCCGATAG
CGGGGTGGGGAAGCCCGGAGGAAGGGGAAGATGGACGACGGCAGAGGTCA
GGGGGGTCTCGCCCACCAGGAGCTTGACGCCCCCTTGCGGCCAGTCCGCG
AGCTCGTCATCGCACTCGCTTCGAAGGTCGAGCTTCCGCGAGACCGTCAA
GGTAGTGAAGCGCAAGCTCAACAACGGAACCATCATCATCAACAAGTACC
GCATCATCTGCGAGCTCGGGAAAGGCTCGTACGGGTCGGTACACCTTTGC
CGGGACGGGGAAACAGGCATTGTGAGTGTTGGGTAGGCCTCGATAGGGGG
GGGCGGCGTGCTCATGTTTTGCATGCCTTGTTGAGTTGGAAGACCTTCAG
AAGCCTAAATCAAACCATCAGACTGTCTAATGGTTTCATTTCGGCTTCTA
TAGACCCATGACCAGTTATCCTCGAGAGGACGGATCGTTGTTCCCACAAG
ACACATCGCCAATCATTCCTTCCTACTTTGGGGGGCGGGGGAGATGCCCA
TGATCGTGATGGCGATGGGGGGGGCACACATGGTTCCATCGTGACGAAAA
TGTCGTGCCGCCCATAGCACGGGAGCACACACCCAGGGCGGTGGTAGTCC
TTTCGGTCGTCGACGTCGTAGACATCGCAAAGAAGGAGCGGGAGAGACAC
AACAAGAAGAGACAACGGCAGAGACAGAGCAGAGACTGCGACTGAGCCCT
GAGACTGAGAGGGCAGAGGTGTCGACACACGGAGAGGGAAGACCGCAAGA
GATGAGCCGAGACTGACATTGAAACCTGAGACTGAGAGGGAAGGGGTATA
GATACAGTGACAGAGGAGACCGGAAGAGATGGACTTGATAAAACACGAGT
GCCACGATCATCTGGGCGTTGGTAGTTACGCCTTTCGGCCTTTCGTCGTC
TGTTTTCAACCCATCAGCCGGGGTAACGCGTGCCCATCGAAATCCACACG
TTGCGTGCTATCCTGAGACCAGGAGTACGCGATGAAGGTCATTGACAAGC
GGAAGCGCGGCGGCATGCGGTCGAGGCAGGGGCAGGGCGGCCATCAGCAC
CTGGCCGAGACGCTGAGGCGCGAGGTGGCGGTGATGAAGAAGCTGAGGCA
CCCGAACATCGTGACCCTGTGGGAAGTTATCGATGACCCCAAGGCGCAGC
AGCTCTACATGATCCAGGTGCGCATAGGAGGCACGGCAGACTGGGTAGGG
GGGGGGGTAGGTTTAGTCGCGGTCATGCGTGCGTTTCAAGAGATGCGATG
ATGTGAGACGCTGCACCCGGCCAAAGAGGGTAGGATGGCGGGGTTCTCCC
AGTCCAGCTTTTCTTTCGATTCCAGCCTGGCACGAGGAGGAGCCTTGTAA
GAACGGTCTTGTCTTTACGTTTACCACCCACCCCCGCGGGTTGTCGACGC
TAACGACAACCGTATCAGCGAACATAAGGAATGAGACGACCTCGTTAATC
AAACATGAAACATTGATTTTCCCAGAGCTTGCAAAAAATCACTCCAAGCA
CAACCACACCTACATCTCTTTCTTTCTCCTTCGCTTTGTTTCTCTGTCGT
TCTCCCCCCTCCCCCCCGCCCCTCTCTCTCTCTCTCTCTTTCTCTCTCTG
TCTCTCTCTCTCTCCATGTCTCCGCCTCTCCCTGCAGGAGTATGTCGCGG
ATGGCCCGCTTCTTCCCGAGGGCGTCGTGGTTTCGCCCATGGACACAGAG
GAGGCTCGAGACAAGTTCGTCGGCTGCATCCGTGGTCTCCACCACCTCCA
CCAGCACGGAGTGGTGCACGGCGACATCAAGCCCCAAAACCTGCTCGTGG
CCAAGGACGGGACTGTCAAGATTGCCGACTTCGGCGCCGCCGTCATGCTG
CAGAGCCAGGCAAGTGCGGGGAACAACAACAACATCGGTGTCTTCGTGTT
GATGGTGTTTTTTTCGAGGCTTTGGGTAGCGTCCCTGTCGGGCAAGTGGG
GTAGCAGCAGCATCGGTACCTCCTCAGCAATTTCGTGTCGATGGTATTTT
CATGACTTTGGATAGCGTCCCCGCCGGGCACCTTGATGTCCGGGTACAGT
AAAGTTGCGTGTACCGTAAGAAGCGTAAGATAACCCACCCACCCACCCCT
AAAGCGATTGGCCAATGGTCTAACCGCTAAGGCATGCAAAACATAAGAGT
TCGCCCCCCCTTAGACCAATTGATAAAGCTCGATAACTCCGTGGCGAAGA
GGACCGTATGGTATCTTGTGCAACGCGGTACCCACTTACTATGATTTTTT
GTCCCATCTACAGAAACGGGCCCGAAATTAAGAAATGGTCTGCTGAAGAA
ATAAGAGACCAAACATTTACATTTGGCGGGAAAGTTTAGACGATGGGGTT
ATGGAGCACAGCTAGCTCGGCGGTGGATCCTACTCTAAACTCTCAATAAC
AAGACCTGTGCCTGACGGTGGCGATGACACACGAAATTTAGCCTCGATCC
GACTTTCACTCTATTGCGGACCCGTTCCGCCCTGTGGGTGCCGGTCTACT
CCGTTCGGTTCATGGCACCAGCGGGGTCCTCTACGTGTGGCTCTGGGTCA
CTTCGGTGCAAGGCACCGGTGGGGTTCTCCACATGTGACTCTGGTGTACT
TCCTCAAATGCCGCGTTCGTTTCCGTCAAATACGATCCGCTCATACAGCA
GTGCGTTCCGTTTTTGGTGGTTATTTTCCATTTCGCTCTACCAGTCCGGG
GAGACGGAGGACGAGGAAGTTTCCAAGACGAAGGGGAAATTGATTTCGAC
ACCGGCCTTCACGCCGCCCGAGCTGTTCGGGGCATCATCGACGGTCAGGT
GGGTGTTGTCGTTGTCGTTGTCGTTGTTGTTGTCGTTTGCTCCTTGACGT
CATCGTACGTGAGCCCGCCTCTGGCCGCGGTGTGTTGCAGTAATCGTTGT
TGTTTCGACACCATGCGCACATGCATCAACCCCCAACGTTACCGCCGCCC
CTTACAAAACCTTTCCCACCCCACTTAACTCTGTGCCCGCGACACCCTAC
CTATGCTCCCACCCAACAAAACGGGAAAACTTGCACCACACAGCCCGGCC
TGCGACGTGTGGGCGATGGGCGTCACCCTCTACCAGATGGTCTACGGCAC
CTTGCCCTTCTGGCCCCCCTCGGGCAATCACTCCGAGCTCGAGATCATGG
TCACCCACAGGGAGCTCTCCTTCCCTTCCCCCTCGTCCTCCTCTCCCTCA
TCGGTGGCTGCCCTAGAGGGCGCGGGGGGCACCGGCATCGGGGTCAGGGG
TGGCGCCGCCGGTGCGGGCGTGGGGTGTGGGGGAGCCGGTGGTAGCGGCG
GTGGTTTGGTGGCAGCGGAGGCCGCGACGGTGGCGGACGAGCCAGACTTG
AAGAACGGGACGAGGACGCTGTCGTCCGGGGTCTTGACCAACCTCGTGGC
TTACGACCCCATGGTCGGCTACTTACGGGTGAGTTTTGAGGCTTCGGAGA
AGTGTCGAAGTGTTGCGGGCGAAGCTTCCGAGACGAGGGATGTGTTTGTT
AGGAGTTTCGAGCGACACGTATGCGTCCAGTAG
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Coding sequence (CDS) from alignment at Scaffold_620:38759..42941+

>EsuBft929_4a-0001 ID=EsuBft929_4a-0001|Name=EsuBft929_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1422bp|location=Sequence derived from alignment at Scaffold_620:38759..42941+ (Ectocarpus subulatus male Bft15b)
ATGAACGAGAAACGGTTCCAGGAGGTGTTGGAGGAGGTGGCGTACCAGCG
GGCCTTTTACCGTGAGCAGCGAGCTCAGCAGCTGGAGGAGGAACAGGAAA
AGCAGGTGTGCGGGGTGGGGAAGCCCGGAGGAAGGGGAAGATGGACGACG
GCAGAGGTCAGGGGGGTCTCGCCCACCAGGAGCTTGACGCCCCCTTGCGG
CCAGTCCGCGAGCTCGTCATCGCACTCGCTTCGAAGGTCGAGCTTCCGCG
AGACCGTCAAGGTAGTGAAGCGCAAGCTCAACAACGGAACCATCATCATC
AACAAGTACCGCATCATCTGCGAGCTCGGGAAAGGCTCGTACGGGTCGGT
ACACCTTTGCCGGGACGGGGAAACAGGCATTGAGTACGCGATGAAGGTCA
TTGACAAGCGGAAGCGCGGCGGCATGCGGTCGAGGCAGGGGCAGGGCGGC
CATCAGCACCTGGCCGAGACGCTGAGGCGCGAGGTGGCGGTGATGAAGAA
GCTGAGGCACCCGAACATCGTGACCCTGTGGGAAGTTATCGATGACCCCA
AGGCGCAGCAGCTCTACATGATCCAGGAGTATGTCGCGGATGGCCCGCTT
CTTCCCGAGGGCGTCGTGGTTTCGCCCATGGACACAGAGGAGGCTCGAGA
CAAGTTCGTCGGCTGCATCCGTGGTCTCCACCACCTCCACCAGCACGGAG
TGGTGCACGGCGACATCAAGCCCCAAAACCTGCTCGTGGCCAAGGACGGG
ACTGTCAAGATTGCCGACTTCGGCGCCGCCGTCATGCTGCAGAGCCAGGC
AAGTGCGGGGAACAACAACAACATCGGTGTCTTCGTGTTGATGGTGTTTT
TTTCGAGGCTTTGGGTAGCGTCCCTGTCGGGCAAGTGGGGTAGCAGCAGC
ATCGGTACCTCCTCAGCAATTTCGTGTCGATGCCCGGCCTGCGACGTGTG
GGCGATGGGCGTCACCCTCTACCAGATGGTCTACGGCACCTTGCCCTTCT
GGCCCCCCTCGGGCAATCACTCCGAGCTCGAGATCATGGTCACCCACAGG
GAGCTCTCCTTCCCTTCCCCCTCGTCCTCCTCTCCCTCATCGGTGGCTGC
CCTAGAGGGCGCGGGGGGCACCGGCATCGGGGTCAGGGGTGGCGCCGCCG
GTGCGGGCGTGGGGTGTGGGGGAGCCGGTGGTAGCGGCGGTGGTTTGGTG
GCAGCGGAGGCCGCGACGGTGGCGGACGAGCCAGACTTGAAGAACGGGAC
GAGGACGCTGTCGTCCGGGGTCTTGACCAACCTCGTGGCTTACGACCCCA
TGGTCGGCTACTTACGGGTGAGTTTTGAGGCTTCGGAGAAGTGTCGAAGT
GTTGCGGGCGAAGCTTCCGAGACGAGGGATGTGTTTGTTAGGAGTTTCGA
GCGACACGTATGCGTCCAGTAG
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