|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D8LPQ6 |
| ProteomeId | EsuBft925_5 |
| Protein domains | IPR027625 |
| Protein domains | IPR029063 |
| Protein domains | PF12847 |
| Protein domains | SignalP-TM |
| Protein domains | PTHR10108 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 8 |
| Max annot lvl | 2759|Eukaryota |
| Length | 155 |
| Hectar predicted targeting category | other localisation |
| Evalue | 7.3e-240 |
| EggNOG OGs | 28JWG@1|root,2QSAN@2759|Eukaryota |
| Ec32 ortholog description | S-adenosyl-L-methionine-dependent methyltransferase |
| Ec32 ortholog | Ec-18_002090.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Methyltransferase domain |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft925_5a-0001 ID=EsuBft925_5a-0001|Name=EsuBft925_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1559bp|location=Sequence derived from alignment at Scaffold_491:524759..531291- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TGCACAGCAGCGTGCAGAGTGTGCTGTGTGCTGTGTGCTGTGCAGCATGC ACGGCAGAGATGCCCAAGTCATGAACCGCGTGCGTGCCATCATCTTTTTC CGAGGTGCTGCTAGTGCTACTTCTTGTGCCGGTTGGCCAACTGCCTATAA TCGGATGTCGACGACCACCAACAGCAACGCCTTCGTTGATGCGGCTAGAA GCACGGCGGCGAGCGGTTCTGTGGTGTACGAGGGGGAGCGGGCGGTCCAC GAATACCTGCAATTTCACTTTGGAAGCCCCGATGAAGTCCTTCCTCATGA CTGCGGGCCGGTCGACGCGTTGGGTTTTCCGAAGCGATGCGCAAGCCTTT GTGCCGAGGCGCTCGTGACGACGGAGACATCGCCACCACCGCCTCTGTCG TCGTCGCCGGAGAGAGAGAAAGACCAGCTGACTGGCGAGGGAGGCGAAGG ACAAACGCCTAAGGCCGGAAGGTCAAATAGGCGCCCCCTCCGCGCGCTGG ATGTCGGATGTGCCGTGGGAGGGATCACGTTCGAGCTGACACGGGCATTT GACGAGGTCGTGGGCGTGGATTTTTCGGCTAGTTTCGTAGAGGCCGCCGA ACGGATGAGAGTGGAGGGAAGAACACAGTACGAGTACTTGGACCAAGGGT CGGCGGTCTTTCGGAGGGAGGCATTTCTGCCGGAGGGAACGGTTCCTTCG CGAGCCAGCTTTTCCCAGGGAGATGCTTGTTCGCTGGACGTGAAAGCACT GGGGTCTTTCGACGCCGTGCTCGCTAGTAACCTGCTCTGCCGGTTGCCGA AGCCTCGATCATTTCTGGGAGACCTTCCGGCCCTGGTCAAGCCAGGGGGG GTGGCAGTTTTGATATCACCTTACTCGTGGCTCAAGGAGTACACGCCCAC GTCGGAGTGGTTGGGGGGATTTCGAGAAGGAGGGGACGCGGGCAAGCAGG AAGGGGAGTACGTCGACAGCTTCGACCGGATTCGGTCGATAATGGAAGCC GACGATGCCTTCGGGCTTGAACGGCGCTGTTCGATGCCCTTCCTTATCCG CGAACACGCGCGAAAATTTCAATGGGGTTGTTCGGATGGGACGGTATGGC GTCGGAAGTTGTAGATGGAACGTTCGGTGGTAACGTGTTGGGCGCTTGGC GTGATGCCGCGGTGCGAAATACCAACTACGACACTGTATTCTCAGGAACA AGCCGCTGTGCGGGGAGTTCGATCCACGCGAGAAGCGCCCTTTCCTTTTC GGAAAGTCCCACACGACCGGTAGAGGGAAAAGCACCGGTAGAGGGAAAAG CTGTCTCTAACTTCATCGTCGGGCGAAGTAGCTGGGACAGGCGTTCTTCA CCTCATGCTTCATCGTTCACCTTGTTTCAAGCATCTCAACGAGAGCTGGG TAACGAGATTTTGCACTCTGTTGCTTTCGTGGATGAGTCGGCACCGGGAT ATCTTGGCACAGACAGAATCGGTATGCGCAAGCACGCCCCGTACACAGGC ACGATGTAAGGTGTATTCCCTCGGCTTAAAATAAAACAATGTTTCCATTT AGGCGGCTA back to topprotein sequence of EsuBft925_5a-0001 >EsuBft925_5 ID=EsuBft925_5|Name=EsuBft925_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=355bp
MHGRDAQVMNRVRAIIFFRGAASATSCAGWPTAYNRMSTTTNSNAFVDAA RSTAASGSVVYEGERAVHEYLQFHFGSPDEVLPHDCGPVDALGFPKRCAS LCAEALVTTETSPPPPLSSSPEREKDQLTGEGGEGQTPKAGRSNRRPLRA LDVGCAVGGITFELTRAFDEVVGVDFSASFVEAAERMRVEGRTQYEYLDQ GSAVFRREAFLPEGTVPSRASFSQGDACSLDVKALGSFDAVLASNLLCRL PKPRSFLGDLPALVKPGGVAVLISPYSWLKEYTPTSEWLGGFREGGDAGK QEGEYVDSFDRIRSIMEADDAFGLERRCSMPFLIREHARKFQWGCSDGTV WRRKL back to topmRNA from alignment at Scaffold_491:524759..531291- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft925_5a-0001 ID=EsuBft925_5a-0001|Name=EsuBft925_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=6533bp|location=Sequence derived from alignment at Scaffold_491:524759..531291- (Ectocarpus subulatus male Bft15b) TGCACAGCAGCGTGCAGAGTGTGCTGTGTGCTGTGTGCTGTGCAGCATGC
ACGGCAGAGATGCCCAAGTCATGAACCGCGTGCGTGCCATCATCTTTTTC
CGAGGTGCTGCTAGTGCTACTTCTTGTGCCGGTTGGCCAACTGCCTATAA
TCGGTATGTGAAGATGTGAAGGACGAATACGAATAAAAATGCTGCTCTTG
TTGATTCAAGGGACTCCTGAATATGCGATGTCCCTTGTGGCATGTGCATG
TAATGCTGTACGGCTTGAGGGCATCCTTTACACTGTAAGTATTGGTGAAG
CAAGAAATTGTTGCCAATCATGGTCTTGTTGTAACATTTCCGTTGTACTG
CTGTGACTCGTAGTTACAGATATTGTACTTGGCCTCTCGGAAGCGATCCG
CCGGAGCCTCTGACTCCACTCACAGGGTTTGTCTACTGCTTCGCGTTGCT
TGAACCAATGCGGTGTTTGCGAAGCAAAAAGTAAGTTTCTGGAAATTACA
CTAAATGGAGATGTGAACAAAACCCGATGTTACTACAAAATTGTATTAAA
TACTGTTCTGTGTATTTTTACGTTTTTACTTATGTACGCAGCGACTTTCC
CATCCCCGGGACACCTGACATGCGTCTCCGCTCTTGGCTGATCTCATCGA
TTTTAAGTACGAGTGTCATCAATTTCTTCACGCCCTATATCCTGTTCTAT
ACCAACGAGTGAGCGCTCCACATGAACACCGTTCGTGCTTTAGTCTAAGC
CATACGCTAACATGAGCGACCACATTCAAGCATCCACCCCACGTGCGGAA
GTACCCTTTGTATATACAGGTCCCATCTCCCGAACGTTGGTTGAGGACCG
TTCCCTCTTTTACGTTGGCGTCCGAGTGATGTTACATTTTGGTAGGAGGA
TCAGGGTTACCAAAGAATGGTGGAATCACCAAGAAATGATGGAGGACCGC
GGAGGCATTCGATTTCGTGGAACGTCTGGTGACGTGGAGGACGTACTGTA
GCGCACCCGTCATTGCACACACATTAGATCGTTCAGAAGGGAATCGACTC
ACCGCCAGCCGGTCTGCTTCCTGCTTACCCTAGAAACCTTCGCTTGCCTA
CATAGCAACCGAGAGAGAGGCTGAGGTAGGTGACCTTTTGAAGGGTCCAA
ATCTCCCCGACATCCTTCGAGGACAATCCCCTCTTTTCTCTTTTCACACA
CGCTGCTTGTCTCTTTGCTCTGCCATCACCGAAGCGTTCTTCCTACACAC
GTACAGCAGTAGGTATCTTTTGCACACAATCGCCTTGTCCCTCAAATACC
GTTGTAATCCCTCCCCACGCTCCACGCTCCCCGGTCCGATCCCGAAGCAG
TTCACCCCGCCGTAGCCACCGGCTAGCTTGTGATTCGATTACCCACGTTT
TGCACCAATCAGCAGGAGAGCCTGGGATGAAATCAAGGGTGTTGCCCAAC
ATAGCTATTTACCATTCCTGACTCCAACAACAACACCCTCACCAAAAGTG
TTGTTGGAGATATGTCTAGAAATAATGGTCGTACAAGTAAGTCTGCCGTG
GTCAACAAACACCCAGTCTCAAAGGCGATCTCCTTGAAACGAACACCAGG
ATGTCGACGACCACCAACAGCAACGCCTTCGTTGATGCGGCTAGAAGCAC
GGCGGCGAGCGGTTCTGTGGTGTACGAGGGGGAGCGGGCGGTCCACGAAT
ACCTGCAATTTCACTTTGGAAGGTGAGGAGGCAAGCTGAGGTCCACTGGC
CCATGGCAAGTTTAAGATTTGTGCCTAGCTGGCAGTGTGCCGCACTTCGG
TACAGCTGCAAATGGCGTTCTTGTAGGACCCCACTGTAGCACGAACACAG
CAAGATGCTACATATGTAGTACTTGACAATTGCTGAGGTGAAACCTTGCG
ATAGTTGAGAGTATTTTTCAACCCTCCCCCCCTGAGATCGCGAAAGACTG
CTCGTGGAATGCACACATGTCCAAGGTAGCGGAAAAGGGCAAAGCACGAG
CAGGGAAGCTGCACTCAATACTCGCAAACTGGCACCTCGATACACGCATC
AAATTGACGGTTTTGAAGAGCGTAATCGTACCGCCGCTAGAGTACGCCGG
AGAAGCATGGGAAGGAAATAAGAAGGTAGTGAAAGAACTCGAGGCGGCGC
AGATGAAAGCAGCGAAATCATACTTGGATGCTCCAAGCGCACAAGTAATG
CAGCCGTCAGGGCAGAATTGGAGATCCAATCCCTACGGTCGGGAAGAGAC
GCAAGGAAGCTGACATGGCAGTATCGCATGTGCGGGATGGGAGAGGAGAG
GTTGCCGAGAGTTGTATGGGAGGCGAAGTGGGCAAACGAAAAGAGGGGTA
GACAACCCATGGAATGGGTCAAGGTTGTAGAGGACGTATGGAAGGGGCTC
GACATCGACGAAGATGAAACGCTGGAAACGGAGGGTCTACAGGGGTTCAA
GGAGAAGATATCTGTTGCTTGTGCCGAGAGAGAAGAACAGAATCTAAGGA
AACAAACCAAGGATAAGGAGGGTCTAGAAGTGTGCGGAATGTTGAAGGAA
GGAATAGGGTTCAAGGACTACCTACATGGACCAATGGATGCAGGAACAAA
GCTTAAGGTCAAATTCAGGACCGGGGACATAGGCCTTCGAGAACGTCGAC
GAAGACATAGGACGGTAGACGAGGAAGACGACGAGTTCAAATGTGANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCAAATTCAGGACCGGGG
ACATAGGCCTTCGATAACGTCGACGAAGGCAAAGGACGGTAGACGATGAA
GATGACGAGTTCAAATGTGATTGCGGCTTCGAATGCGAAGACCGTGTTCA
TGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCCCCTCTGTTGTGCACCCCTCCTTTCGTT
CGGTTTCCTGATGTCGTTTGTCCGCTCAAGCCCCGATGAAGTCCTTCCTC
ATGACTGCGGGCCGGTCGACGCGTTGGGTTTTCCGAAGCGATGCGCAAGC
CTTTGTGCCGAGGCGCTCGTGACGACGGAGACATCGCCACCACCGCCTCT
GTCGTCGTCGCCGGAGAGAGAGAAAGACCAGCTGACTGGCGAGGGAGGCG
AAGGACAAACGCCTAAGGCCGGAAGGTCAAATAGGCGCCCCCTCCGCGCG
CTGGATGTCGGATGTGCCGTGGGAGGGATCACGTTCGAGCTGACACGGGC
ATTTGACGAGGTAGGGGACGGGCGGTGAGCGGGTTAGAGTAGAGTAGGTT
CGACAAGGCTAGTGGCAAAGCGTCTGCAACGGATTTCGTTGCCGTGACTG
GACTGCCATTGTGCTGAAAAAAACATGGAATATGGAATGGATGTCACATG
TGTTGCATGATACTCTGTATTTTCAACCGGAGCGTCGTTGTGCTGCTGCC
GCTGCCGCTGCTGGTTCTGTTTCTTTGTGTGCCCATGCGCATTAACTAAT
GCTTGTCCAGGAGCCCAAGCGGGAATATTTCTTTTCCCCCCAACTTCCGT
TCGTGGAGGTGGTGTGCGTGACTCTCCACGTGCCCGCCTCGTGAGCTGCT
CCTTTCCTTCGGGAGGCACGACTGGACACGATGAAAAACCTATCCATTAC
CACCATCTTCGCCTTGTTGATTCAGGCATTCATTCGTGCGATCACTTGTT
GTTCCCAACAAAACCCGTTGTACGATCACCCCGTGGGATTATAGTTTGAC
GCCCCCTCTGTCCCTGCCCTAATTATTTACCGACGTCCCAGGTCGTGGGC
GTGGATTTTTCGGCTAGTTTCGTAGAGGCCGCCGAACGGATGAGAGTGGA
GGGAAGGTAAACAGTAACCATAGTATACGGAGCATTCTGTTTCGCCCAAA
TGGTAGATGTTTCGAGCATTTACTCGCTATATACTCGTAGACTCCGGTGC
TCTAAGGGTATCCTGGAAACCGCTAGTCGCAAACGTTGTGAGTTTGAATC
TTCACGAGGTGAAAAATCTGCAAAACTTGCGGGTGAAAGCGAAAAATAGC
TGAAACGCTCTCGTGAGTACCAAACTTCGACGTTAGCACCGTTGACGAGG
GAAAGGGACGGTTGGACCCTTCTCGCGGTAAAAATAGAAATCAGCACGCA
CCCCAGGAGAAAGGTGGGGCACGAAAATTAAAAAAGAAGAAAAAAGCCCT
GGTGTTTAGCCCCTCGTATGTGCCCTGGACAGTTGTAGTTGTACGAACAA
CACACACTGAAAAGTTTAGTACTCTACATACACTGAAGAGTGTAGTACAC
GTCTCACCATGAAAAATGGAGGGACTGTCGCCATAATAAACAGGACGATA
AAAACAACAACTCTCCTGTTATTGGCAGTATTGTGCGGGCAACTGGCATT
ATCGCCAAGTTCTCCCCCCCGCCCCCTGCCCACGCCGTGCGCATCAACAA
CCAACGAATGATCCCCCTTCATCCCCCTTCAGAACACAGTACGAGTACTT
GGACCAAGGGTCGGCGGTCTTTCGGAGGGAGGCATTTCTGCCGGAGGGAA
CGGTTCCTTCGCGAGCCAGCTTTTCCCAGGGAGATGCTTGTTCGCTGGAC
GTGAAAGCACTGGGGTCTTTCGACGCCGTGCTCGCTAGTAACCTGCTCTG
CCGGTACGTCATCCATGGATTTATTTCCATGTAAATTCCTGGCCGCTTTT
CGTTGCTGGAGGTTGTGTTTTTTTTCGGGGGCAGAAGTGCCATGGGTTGA
ATAGGTATCCCGGCTACCCAAACGTTTCACGTTCGGCAGACATGGCTATA
CTTGGCAAGGGGGGCATACAGTAGACTTCGTGCGTTGTTCTCATTACAGG
AAGCACAGATACGCGTCCCTTTGATTTGTACGTCATTCCTCCCGATGCTG
CCGTACCTAATCCTCATGTTGGGTGCACTGATACAATGCCTCAGGTTGCC
GAAGCCTCGATCATTTCTGGGAGACCTTCCGGCCCTGGTCAAGCCAGGGG
GGGTGGCAGTTTTGATATCACCTTACTCGTGGCTCAAGGAGTACACGCCC
ACGTCGGTAAGATGAGACAAACGCCGGTGATACTCGCGGCCGACCGTTTT
TTGCCCCCAATGAACGCGTTGTTTGTCCCAAACCCGCAGAACGTAGATGT
GGGGTAGATGGAACTTTACTGTTGTGAGCAAATCACCCGGGGCGGGGTGG
TGGTGGGGGCGCACTCATTCGCAGTGTCCGTCCGTTTGGCTTGTCTCCAC
CTACCTGCCGGAGCCGAATCGACTAGATAGAACTTGAGTCGGCGTGGCCC
CTTCTCGCTGTGCACAGGGGGGCAGGCTTGGTGGTTCCCAAGCAATTGTC
ATGCAGCCAAGAGTGGTGATTTGTTCACAGGTTCACAGGCCAAAAAAGTG
TTTATCACGATGTTTGTCGAGGGCCACGTATGTATCTAGCGCAATGACGA
TTCTGGCATGACTGTGTCCAGGAGTGGTTGGGGGGATTTCGAGAAGGAGG
GGACGCGGGCAAGCAGGAAGGGGAGTACGTCGACAGCTTCGACCGGGTGA
GCTATCGAGTCTAACAAAATCAATTGATACACGAGTTCACTGTGTGGGTG
CTAATGGTGGTCTTGTCGGAGCAGGCCTGCCAAGGTCGGTACCTTTTTGT
TCATAGGTCCTGGTGTGTCTATCTTACCCTTGTCTTGCAGTCAAAGGCTC
CACGACGTCAACGCAGCAGCCTATCACGGTCTTGCATCGAACACTCAAGC
TGCTCGATTCAGATCCGTGACAACACCAAGCAAACCACCATAGGTTTCTG
AAGCGACTCTCCCGTCTCTCCTCCCCCCTCCTCCTCTTTCCCTACCCTCC
CAGATTCGGTCGATAATGGAAGCCGACGATGCCTTCGGGCTTGAACGGCG
CTGTTCGATGCCCTTCCTTATCCGCGAACACGCGCGAAAATTTCAATGGG
GTTGTTCGGATGGGACGGTATGGCGTCGGAAGTTGTAGATGGAACGTTCG
GTGGTAACGTGTTGGGCGCTTGGCGTGATGCCGCGGTGCGAAATACCAAC
TACGACACTGTATTCTCAGGAACAAGCCGCTGTGCGGGGAGTTCGATCCA
CGCGAGAAGCGCCCTTTCCTTTTCGGAAAGTCCCACACGACCGGTAGAGG
GAAAAGCACCGGTAGAGGGAAAAGCTGTCTCTAACTTCATCGTCGGGCGA
AGTAGCTGGGACAGGCGTTCTTCACCTCATGCTTCATCGTTCACCTTGTT
TCAAGCATCTCAACGAGAGCTGGGTAACGAGATTTTGCACTCTGTTGCTT
TCGTGGATGAGTCGGCACCGGGATATCTTGGCACAGACAGAATCGGTATG
CGCAAGCACGCCCCGTACACAGGCACGATGTAAGGTGTATTCCCTCGGCT
TAAAATAAAACAATGTTTCCATTTAGGCGGCTA back to topCoding sequence (CDS) from alignment at Scaffold_491:524759..531291- >EsuBft925_5a-0001 ID=EsuBft925_5a-0001|Name=EsuBft925_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1068bp|location=Sequence derived from alignment at Scaffold_491:524759..531291- (Ectocarpus subulatus male Bft15b) ATGCACGGCAGAGATGCCCAAGTCATGAACCGCGTGCGTGCCATCATCTT TTTCCGAGGTGCTGCTAGTGCTACTTCTTGTGCCGGTTGGCCAACTGCCT ATAATCGGATGTCGACGACCACCAACAGCAACGCCTTCGTTGATGCGGCT AGAAGCACGGCGGCGAGCGGTTCTGTGGTGTACGAGGGGGAGCGGGCGGT CCACGAATACCTGCAATTTCACTTTGGAAGCCCCGATGAAGTCCTTCCTC ATGACTGCGGGCCGGTCGACGCGTTGGGTTTTCCGAAGCGATGCGCAAGC CTTTGTGCCGAGGCGCTCGTGACGACGGAGACATCGCCACCACCGCCTCT GTCGTCGTCGCCGGAGAGAGAGAAAGACCAGCTGACTGGCGAGGGAGGCG AAGGACAAACGCCTAAGGCCGGAAGGTCAAATAGGCGCCCCCTCCGCGCG CTGGATGTCGGATGTGCCGTGGGAGGGATCACGTTCGAGCTGACACGGGC ATTTGACGAGGTCGTGGGCGTGGATTTTTCGGCTAGTTTCGTAGAGGCCG CCGAACGGATGAGAGTGGAGGGAAGAACACAGTACGAGTACTTGGACCAA GGGTCGGCGGTCTTTCGGAGGGAGGCATTTCTGCCGGAGGGAACGGTTCC TTCGCGAGCCAGCTTTTCCCAGGGAGATGCTTGTTCGCTGGACGTGAAAG CACTGGGGTCTTTCGACGCCGTGCTCGCTAGTAACCTGCTCTGCCGGTTG CCGAAGCCTCGATCATTTCTGGGAGACCTTCCGGCCCTGGTCAAGCCAGG GGGGGTGGCAGTTTTGATATCACCTTACTCGTGGCTCAAGGAGTACACGC CCACGTCGGAGTGGTTGGGGGGATTTCGAGAAGGAGGGGACGCGGGCAAG CAGGAAGGGGAGTACGTCGACAGCTTCGACCGGATTCGGTCGATAATGGA AGCCGACGATGCCTTCGGGCTTGAACGGCGCTGTTCGATGCCCTTCCTTA TCCGCGAACACGCGCGAAAATTTCAATGGGGTTGTTCGGATGGGACGGTA TGGCGTCGGAAGTTGTAG back to top
|