Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 4792.ETI53028 |
| ProteomeId | EsuBft921_8 |
| Protein domains | IPR027806 |
| Protein domains | PTHR22930 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Max annot lvl | 4776|Peronosporales |
| Length | 282 |
| Evalue | 4.25e-13 |
| EggNOG OGs | KOG4585@1|root,KOG4585@2759|Eukaryota,3QI3U@4776|Peronosporales |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | nuclease activity |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft921_8a-0001 ID=EsuBft921_8a-0001|Name=EsuBft921_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2823bp|location=Sequence derived from alignment at Scaffold_360:168661..172943+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TGTCTTCATCACACCACACCTAGGCAGCACCACCAACGCCCCAAACCGCT
TCCCGAGGCAACTCCACTACCATGGCTGAGCGCCGGAAGCGCCAGCATCC
CCAGGGGCCCGCAGCGCAACGTCGGGAGAAGCGCCGTCGAGGAGCAATCG
ACGAGGTCGGTGCAGCCCAGGAACACAGGAGATCTCTCACAGCCCTGGGT
CTTCTGTAGTGGCGGCGGGCGTGGTGGCAGCAGGAGAAGCTCATCGTGCC
CACTGCCCTCAGGAACGGGAGCCCATCTACGAGTCCAAGCGGCTTCCGCG
GGCCCAACACGAGGCGGACCTCAATAAACGGCAAGGCTGGCGGCGGTCGT
ACCGCATGGAGAAGGCCAGCTTCCACAAGCTTGTCGAGCTACTCCGCCCT
CCGCTGGCAGTCAACGCCTTCTTCGGCGCACTGCGATCGCCTATCAACGG
CGCCATAGCTGTAGAAGTCCGCGTTGCCGTGGCGTTGAGGATCCTGGCTG
GCGCTAGTTACTGGGATGTTGCCCTCATGTTTGGCTTGTCGGTGCCGACC
ACGTACCAGATCCTGTGGTCGGTGATCGACGCCATCAACAAGACGCCTGC
GGTTGGGGCATTCGACTTCCCCCTGACCGAGGAAGGCTGCATGCGAAATG
CCAACAGATTCGAGGGGAAGAGCACCGATGGCATTTTCTGCTGGGTCGTC
GCCGCCGTGGACGGTCTGTTCATCAAGGCCAAGGCTCCGTGTGCGAAGGA
CACCGCCAACGTCATCGCGTACTACTCCGGCAACAAGTCCGCGTACGGCA
TCAACGTACAAGCGATGTGCACCGCCGACTACCGGTTCTGCGCAATGTCG
GCGATCTCTCCAGGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGATATGT
AAACGAGGAGAAGAGGGTAGAAAGAGAGAGTGGCCAGAGAGAGCAGAGGG
AGAGGAGAGTCGAAGACTCTCCGCTTCTCCTTTCGGCAAATGGCCATGGA
CTTCGGAAGAGACAAATCTCCGACGGTGCATTTCCTGTCACTCTCCCAGT
GACAAGATACCCCGATGGAGCTATATCTTCCTACACTTTGTATGTGCACT
CATGGTTGGTTATACTCCCGACAGGTGTCCTCCACATGTTCGACTTTTTT
TTTCCTAGTTAGGAGCGTATGAATCGAAAACGTTGTTTGTTGTCGTTGAT
ACAACTTGTAATGGTGTCTCTGCACCCCTGCATTAAATATTCGTCGCGTG
GGTGAAACATTGCTCCAGGTTGCAGACCTGAAGGAGACCCACACACACAC
TAAAAATTGGGGTCTTGTCGAATCCCATCGCGAACACATTCCTGCGCTTC
AAGTGAGCATGCGCGGAGACGGGAAAAATTGCAAGGCTCCAAATTTGCGG
AACCCAAGCGTGCCTCAGAGTTCCCGTCAACACCCAACGTAGTATTGGGT
TGCAAGAACAAGTCTTGCAAATAGGAAAAAACTAAACGATATGCATGTCC
GCAGATTGCCGGCACGGCAGGTTACCCGCAAGACAGCAATATCTTCGGCG
TTCTTCCACCGTATTTTTTCGTTGATACTCCTTTGTTGCCGCAAGGCATC
CTCTCAAAGTGTTGTTGCCAACCAAACAACCCACACGTCTCTGCGGAGGC
GCACGTATTATCCTAAAAAAACATGATGCAACGAATAGACGAAGACGTTG
ACTCAACCATGCCCAACTATAAAAATGAAAACTCCCCCCCCCCCTGGCCC
AAAAAAAAATAGAAGGCTACGACCCTCGCAGCAAGCAAGCCCTGCAGCAG
GGAGAGAAAAACAAAAAACGCGCCCTCGTGTTCGTTGAATACAGGCACAG
CAACTTGCCCGTGAACCACAACAGTCTCGGCGTTCTTCCACCGTATTTTT
TCGTTGATACTCCTTTGTTGCCGCAAGGCATCCTCTCAAAGTGTTGTTGC
CAACCAAACAACCCACACGTCTCTGCGGAGGCGCACGTATTATCCTAAAA
AAACATGATGCAACGAATAGACGAAGACGTTGACTCAACCATGCCCAACT
ATAAAAATGAAAACTCCCCCCCC back to topprotein sequence of EsuBft921_8a-0001 >EsuBft921_8 ID=EsuBft921_8|Name=EsuBft921_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=273bp
MEKASFHKLVELLRPPLAVNAFFGALRSPINGAIAVEVRVAVALRILAGA
SYWDVALMFGLSVPTTYQILWSVIDAINKTPAVGAFDFPLTEEGCMRNAN
RFEGKSTDGIFCWVVAAVDGLFIKAKAPCAKDTANVIAYYSGNKSAYGIN
VQAMCTADYRFCAMSAISPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXX back to topmRNA from alignment at Scaffold_360:168661..172943+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft921_8a-0001 ID=EsuBft921_8a-0001|Name=EsuBft921_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4283bp|location=Sequence derived from alignment at Scaffold_360:168661..172943+ (Ectocarpus subulatus male Bft15b)
TGTCTTCATCACACCACACCTAGGCAGCACCACCAACGCCCCAAACCGCT
TCCCGAGGCAACTCCACTACCATGGCTGAGCGCCGGAAGCGCCAGCATCC
CCAGGGGCCCGCAGCGCAACGTCGGGAGAAGCGCCGTCGAGGAGCAATCG
ACGAGGTCGGTGCAGCCCAGGAACACAGGAGATCTCTCACAGCCCTGGGT
CTTCTGTAGTGGCGGCGGGCGTGGTGGCAGCAGGAGAAGCTCATCGTGCC
CACTGCCCTCAGGAACGGGAGCCCATCTACGAGTCCAAGCGGCTTCCGCG
GGCCCAACACGAGGCGGACCTCAATAAACGGCAAGGCTGGCGGCGGTCGT
ACCGCATGGAGAAGGCCAGCTTCCACAAGCTTGTCGAGCTACTCCGCCCT
CCGCTGGCAGTCAACGCCTTCTTCGGCGGTGAGTGTTGATGTGTAAATGC
AGCCGCCCACGGCCGGTATGCGTAAGGCTTCCTCTCATGTATACGTAGAG
AACAACGGGGAAGAGCAAGTCTAAAACCCAGGAGAAACACTACTGCTGTA
GTCTAGACTGCCTTGCTGTTTGCTATCTTCTAAAAAAAAAACTCCCTCAT
CGAAACATGCAGCCAGAGGGTATGCATACACGCAGCAGCACTTATTCTAC
AGCAGTAGGTACAGCAGTGTCTGCATATGCATACAGCAGCAGTCGTTGTA
TGGGAACGACAGGAAGGTACTATGGTGGCGCTGAAATAAGTTCAGCAGTA
TGAATAGAGCGTGCAACACACGCCGGCACCACCATACATACATTATACAT
GCCTCGTCGGGAGCCTACACAGGTTGTAGTATCCCGCAATGATAGCATAC
AAGAGTCGACACGTGCTCCTCATATGCATATTCGACGTTAGTTGTGTGTT
CCGTGACGAACACAGAGCCGTCTCACAACCCTAGTCGGGAGGTGTATTGT
GTATTGGGCCGGTACTCTGGCGAGTTTAACGATGACATGCGTCCTTTGAC
GCTGGCGATTGCAAATACACCCCCTATGACACTGGTACATATTTCCTGAC
CGACACACGCTCATCCTTTGAACATTATCTGGGCGTCGCTCCGAAACCCC
ACAGCACTGCGATCGCCTATCAACGGCGCCATAGCTGTAGAAGTCCGCGT
TGCCGTGGCGTTGAGGATCCTGGCTGGCGCTAGTTACTGGGATGTTGCCC
TCATGTTTGGCTTGTCGGTGCCGACCACGTACCAGATCCTGTGGTCGGTG
ATCGACGCCATCAACAAGACGCCTGCGGTTGGGGCATTCGACTTCCCCCT
GACCGAGGAAGGCTGCATGCGAAATGCCAACAGATTCGAGGTGAGGCCTA
ACGGTGGTCATTACTGCTGCTGCTGTGGGTTATTCTTGGCGACATTCTCT
TGACCAGCCGCGGGATGTCGTTTTTTTTTAATTACGGCTGGCGTTTCCAG
CCGTTTTAGTGTAGGGAGGCCTATACACAGCCTTCGNCGAGGTGAGGCCT
AACGGTGGTCATTACTGCTGCTGCTGTGGGTTATTCTTGGCGACATTCTC
TTGACCAGCCGCGGGATGTCGTTTTTTTTTAATTACGGCTGGCGTTTCCA
GCCGTTTTAGTGTAGGGAGGCCTATACACAGCCTTCGACGGTAACGCAAG
AAAAAAAATGTCGTCCCCGGCGGATACAAGTTCGGATTGTCATCGTGGTC
AGCATGCCTTTAATCGAAAAACAACCCCCGGGTCCCGGCCCAGGTCCCGG
GTGGTTCGCCAGCTGTTGGTCTTTGTACAAATGGTCTTTTTACAAATAAA
TGTTTTTTTTTGTGTCATCATTAGTATGCTGGCCGTGTTGGTTCCGCCCC
GCAACAGTGGCCCGGCAACTGCTTTTAGTCAACCACGTGGCTCTGAGATA
CCCTGGTACATTTTTACCGCTGAACCTGACGCAATATTAGGATTAGCAAA
CACGGTATGTGCACCGTTGCTGGTGATGGCGCCGTCGTACACGACATCAA
CCCACACAACGTACAGCCGAACGCAGTTTACCGAAGTTCGTCAACGTCCA
TCTCTCGACTAATTTTTTTCCCCTTCCCGGCACTGCTACTTTCCCGCCCT
CTTGTCTGCCGTCTATAAATGCAGGGGAAGAGCACCGATGGCATTTTCTG
CTGGGTCGTCGCCGCCGTGGACGGTCTGTTCATCAAGGCCAAGGCTCCGT
GTGCGAAGGACACCGCCAACGTCATCGCGTACTACTCCGGCAACAAGTCC
GCGTACGGCATCAACGTACAAGCGATGTGCACCGCCGACTACCGGTTCTG
CGCAATGTCGGCGATCTCTCCAGGCTCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CGTGATATGTAAACGAGGAGAAGAGGGTAGAAAGAGAGAGTGGCCAGAGA
GAGCAGAGGGAGAGGAGAGTCGAAGACTCTCCGCTTCTCCTTTCGGCAAA
TGGCCATGGACTTCGGAAGAGACAAATCTCCGACGGTGCATTTCCTGTCA
CTCTCCCAGTGACAAGATACCCCGATGGAGCTATATCTTCCTACACTTTG
TATGTGCACTCATGGTTGGTTATACTCCCGACAGGTGTCCTCCACATGTT
CGACTTTTTTTTTCCTAGTTAGGAGCGTATGAATCGAAAACGTTGTTTGT
TGTCGTTGATACAACTTGTAATGGTGTCTCTGCACCCCTGCATTAAATAT
TCGTCGCGTGGGTGAAACATTGCTCCAGGTTGCAGACCTGAAGGAGACCC
ACACACACACTAAAAATTGGGGTCTTGTCGAATCCCATCGCGAACACATT
CCTGCGCTTCAAGTGAGCATGCGCGGAGACGGGAAAAATTGCAAGGCTCC
AAATTTGCGGAACCCAAGCGTGCCTCAGAGTTCCCGTCAACACCCAACGT
AGTATTGGGTTGCAAGAACAAGTCTTGCAAATAGGAAAAAACTAAACGAT
ATGCATGTCCGCAGATTGCCGGCACGGCAGGTTACCCGCAAGACAGCAAT
ATCTTCGGCGTTCTTCCACCGTATTTTTTCGTTGATACTCCTTTGTTGCC
GCAAGGCATCCTCTCAAAGTGTTGTTGCCAACCAAACAACCCACACGTCT
CTGCGGAGGCGCACGTATTATCCTAAAAAAACATGATGCAACGAATAGAC
GAAGACGTTGACTCAACCATGCCCAACTATAAAAATGAAAACTCCCCCCC
CCCCTGGCCCAAAAAAAAATAGAAGGCTACGACCCTCGCAGCAAGCAAGC
CCTGCAGCAGGGAGAGAAAAACAAAAAACGCGCCCTCGTGTTCGTTGAAT
ACAGGCACAGCAACTTGCCCGTGAACCACAACAGTCTCGGCGTTCTTCCA
CCGTATTTTTTCGTTGATACTCCTTTGTTGCCGCAAGGCATCCTCTCAAA
GTGTTGTTGCCAACCAAACAACCCACACGTCTCTGCGGAGGCGCACGTAT
TATCCTAAAAAAACATGATGCAACGAATAGACGAAGACGTTGACTCAACC
ATGCCCAACTATAAAAATGAAAACTCCCCCCCC back to topCoding sequence (CDS) from alignment at Scaffold_360:168661..172943+ >EsuBft921_8a-0001 ID=EsuBft921_8a-0001|Name=EsuBft921_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=819bp|location=Sequence derived from alignment at Scaffold_360:168661..172943+ (Ectocarpus subulatus male Bft15b)
ATGGAGAAGGCCAGCTTCCACAAGCTTGTCGAGCTACTCCGCCCTCCGCT
GGCAGTCAACGCCTTCTTCGGCGCACTGCGATCGCCTATCAACGGCGCCA
TAGCTGTAGAAGTCCGCGTTGCCGTGGCGTTGAGGATCCTGGCTGGCGCT
AGTTACTGGGATGTTGCCCTCATGTTTGGCTTGTCGGTGCCGACCACGTA
CCAGATCCTGTGGTCGGTGATCGACGCCATCAACAAGACGCCTGCGGTTG
GGGCATTCGACTTCCCCCTGACCGAGGAAGGCTGCATGCGAAATGCCAAC
AGATTCGAGGGGAAGAGCACCGATGGCATTTTCTGCTGGGTCGTCGCCGC
CGTGGACGGTCTGTTCATCAAGGCCAAGGCTCCGTGTGCGAAGGACACCG
CCAACGTCATCGCGTACTACTCCGGCAACAAGTCCGCGTACGGCATCAAC
GTACAAGCGATGTGCACCGCCGACTACCGGTTCTGCGCAATGTCGGCGAT
CTCTCCAGGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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