Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft917_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 201 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft917_2a-0001 ID=EsuBft917_2a-0001|Name=EsuBft917_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2019bp|location=Sequence derived from alignment at Scaffold_70:94303..96645+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTGGAGATGGAGGCCGAGGTAATGGCCAAAAAGAGAGCGTGGTCGCC
GTTCGTTCGGACGTATTCCCGGCCTGCACAAGAGGTTGAGGACGACCTGG
TGAAGTACGTAGGTGACTACGTCAAGCTTGACCAGGCTGCCATCGCCAGG
AAGGAGCTGCCACTGCTGCGCCCGGATTTACCACCAGGCAAATCGGGTCC
TATTGGCGCCATGGCAGCGCTGAACAAGCTCGTCAAGTGCCTCCGGGAAG
GATGCGGCCAGGATCCGTTCGACGTCAACCAAATGTATATCCCGCTTGGT
AGAGGGCCGAAGACTGGGCTCATGAGGTGGTCCAAGAAAGGAGGGACCGG
AAAGAACGAGAACTTCCACGGTGGCATCAACCGCCTGGTGAACGGCGTGG
CTCGGCTCGGTGCGGAAGCGTGCGATGCGAGGCTGCTGCAACGCATTCAT
CGTCACAACCACGACATGGACCGAAAGCTTGGCCGCACCAGCAAGCAGTC
TACCCTGTGGGTCTGGAGGGAGCGTAAGGCGAACGCTGCAGCCGAGTCGA
TCCTCACTTCGCGCCCGTTCCCCCGAGCGGGTGACACTCCGACGGTGGCC
GCGGAGGACTTTGAGCCTATGGGGTTCGAATACGCCGAACAGAGGAGAGC
CAACGCTCTGACAAACGCGAAAACCGCCGCGGCGAACTCGCTAGTCCTCA
CCCGTACTTCTCTGCCGTCAACGACGGCAGGAGATACCAGCCGGGCGGGG
GCCGCGGCCGTCGGGGCAGGAGCGGGGGCTCCGGCGGGGACCGCGGTGGG
TGCATGTGCGAGGGTGATGCCGTTGCCGTTGACCAACAGAGGAGGTCGGC
CGGGAGCGGCGGCGCTCATGCCGTCGACGATAGCGACAGGTTCTTCCGCC
GGTGCGGGGGCCGTGCCGCCACTGCTGTTGCCGCCAACGGCGACAGGAGG
GGCTGCCGAGGGGGCGGGGGCCGTCCCGCCGCTGTTGTTGCCGTCAACGA
CGACAGGAGTTGCTGCCGAGGGCGCTGCGGGTGCCAGTGGCGGCGGGGTG
ATGGGAGGTGCGACCAGCAGGACCTACCGCAGCAACGCTGGAGAAGCCGC
CGCCCAGGACATCTCGCGCGGTAACTACGGGGGGGGGCGGCGTTTGCCTT
CAAGGCACCCGACCCTGGAGAGGGTTAAAGCGTTGACTCCGACAAGTGAT
GCAGAGCTGGAGGCCTTTGCCACCTGTCTCGCGGAAGCGACGATGGTCTG
CGACGGGAAGAGCCAGGTGATGACCGAGGCGACGAAACGTTACAACGCAA
GGTATTACAGACAAGCACTTACGGGTGGCGCGCCGAAACTTATCCGTGCG
CCTACTACGGTAGAGAAGGCGCGAAATCGATCCAAGATAGCGGCCAAGGC
AGGAAGGGACCGAGATGCCGCCGCCGACCTCGCAGCCGTGAACGAGATAT
CTCGAGTCAGGACGTCCTCTGCTTCGACTTCTACTTCGACACCGCCGCCA
GCATCGAAGCGCGCCAGAGGGGACAGAGATAGAGCGAGTGAAAGAGTCGC
TAGCGGGGTGCCTTTGAAGCTTGAACAGATCAGCACCCTCACGGACGCAG
CCGCGATCGCCTACATGAAAGCCATAGGGTTGAAGTTGACAGGCAATGTT
GCACTCAAGCGGAAGAAACTATCCGACTTTTTCGAAAGCAAGAATATTTC
AGAGTACAGGTACTCTCCGTCAAGGCCTGCGACATCGCCCGCGCCCGCCG
AAGGACCCGCCAGTGGGCACATGTCGATCCGAGGGTTGGGGACTCGAAAT
ATCTGCTGGTGTTGAGTTGGTGTAGATGTATTTATCGGCGGGGCCTGCTC
TTTCTCCACCTTTGATCCAGACAATTAAATATTATTTATGATTCCATGCG
TGGACCGTCAAGGGTGATGGCTCTGTCCTCCTCTGTGCGTTTTGTTGTCT
GGCGTATGTGTTTGCCTCCTGCGTGGGAGACGGGATAGATATTCCGTTCG
TCTCGTCCCGAACGACCGG back to topprotein sequence of EsuBft917_2a-0001 >EsuBft917_2 ID=EsuBft917_2|Name=EsuBft917_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=604bp
MLEMEAEVMAKKRAWSPFVRTYSRPAQEVEDDLVKYVGDYVKLDQAAIAR
KELPLLRPDLPPGKSGPIGAMAALNKLVKCLREGCGQDPFDVNQMYIPLG
RGPKTGLMRWSKKGGTGKNENFHGGINRLVNGVARLGAEACDARLLQRIH
RHNHDMDRKLGRTSKQSTLWVWRERKANAAAESILTSRPFPRAGDTPTVA
AEDFEPMGFEYAEQRRANALTNAKTAAANSLVLTRTSLPSTTAGDTSRAG
AAAVGAGAGAPAGTAVGACARVMPLPLTNRGGRPGAAALMPSTIATGSSA
GAGAVPPLLLPPTATGGAAEGAGAVPPLLLPSTTTGVAAEGAAGASGGGV
MGGATSRTYRSNAGEAAAQDISRGNYGGGRRLPSRHPTLERVKALTPTSD
AELEAFATCLAEATMVCDGKSQVMTEATKRYNARYYRQALTGGAPKLIRA
PTTVEKARNRSKIAAKAGRDRDAAADLAAVNEISRVRTSSASTSTSTPPP
ASKRARGDRDRASERVASGVPLKLEQISTLTDAAAIAYMKAIGLKLTGNV
ALKRKKLSDFFESKNISEYRYSPSRPATSPAPAEGPASGHMSIRGLGTRN
ICWC back to topmRNA from alignment at Scaffold_70:94303..96645+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft917_2a-0001 ID=EsuBft917_2a-0001|Name=EsuBft917_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2343bp|location=Sequence derived from alignment at Scaffold_70:94303..96645+ (Ectocarpus subulatus male Bft15b)
ATGTTGGAGATGGAGGCCGAGGTAATGGCCAAAAAGAGAGCGTGGTCGCC
GTTCGTTCGGACGTATTCCCGGCCTGCACAAGAGGTTGAGGACGACCTGG
TGAAGTACGTAGGTGACTACGTCAAGCTTGACCAGGCTGCCATCGCCAGG
AAGGAGCTGCCACTGCTGCGCCCGGATTTACCACCAGGCAAATCGGGTCC
TATTGGCGCCATGGCAGCGCTGAACAAGCTCGTCAAGTGCCTCCGGGAAG
GATGCGGCCAGGATCCGTTCGACGTCAACCAAATGTAAGTGGCTCTCGTC
AAGACGGCACCAATGCTTCAAGGCTGTTTCCACTGTTGTACTCTTATGCG
TTGATGTTTTTGCAGAATGTATTCTCAGTCATGTTTTTCCACCCTGCCGC
TTGTTTTTCTGTCGTACCATGTATGGCCTCAGGTATATCCCGCTTGGTAG
AGGGCCGAAGACTGGGCTCATGAGGTGGTCCAAGAAAGGAGGGACCGGAA
AGAACGAGAACTTCCACGGTGGCATCAACCGCCTGGTGAACGGCGTGGCT
CGGCTCGGTGCGGAAGCGTGCGATGCGAGGCTGCTGCAACGCATTCATCG
TCACAACCACGACATGGACCGAAAGCTTGGCCGCACCAGCAAGCAGTCTA
CCCTGTGGGTCTGGAGGGAGCGTAAGGCGAACGCTGCAGCCGAGTCGATC
CTCACTTCGCGCCCGTTCCCCCGAGCGGGTGACACTCCGACGGTGAGCCC
CAGTTGTATACTCATGGGAGGACACTTTCAACGTCGAGGGATTCTGCATT
CGTAGCCTTCATTTTTTTATGTGCCGTCGGTGCCGTGAAGTTTGGTACGC
CCACCCCGATCCATATGACGCGAGCTCTCTGACGTTTGTGCGTCACCCTA
TTGGATGACTCATTTCAGGTGGCCGCGGAGGACTTTGAGCCTATGGGGTT
CGAATACGCCGAACAGAGGAGAGCCAACGCTCTGACAAACGCGAAAACCG
CCGCGGCGAACTCGCTAGTCCTCACCCGTACTTCTCTGCCGTCAACGACG
GCAGGAGATACCAGCCGGGCGGGGGCCGCGGCCGTCGGGGCAGGAGCGGG
GGCTCCGGCGGGGACCGCGGTGGGTGCATGTGCGAGGGTGATGCCGTTGC
CGTTGACCAACAGAGGAGGTCGGCCGGGAGCGGCGGCGCTCATGCCGTCG
ACGATAGCGACAGGTTCTTCCGCCGGTGCGGGGGCCGTGCCGCCACTGCT
GTTGCCGCCAACGGCGACAGGAGGGGCTGCCGAGGGGGCGGGGGCCGTCC
CGCCGCTGTTGTTGCCGTCAACGACGACAGGAGTTGCTGCCGAGGGCGCT
GCGGGTGCCAGTGGCGGCGGGGTGATGGGAGGTGCGACCAGCAGGACCTA
CCGCAGCAACGCTGGAGAAGCCGCCGCCCAGGACATCTCGCGCGGTAACT
ACGGGGGGGGGCGGCGTTTGCCTTCAAGGCACCCGACCCTGGAGAGGGTT
AAAGCGTTGACTCCGACAAGTGATGCAGAGCTGGAGGCCTTTGCCACCTG
TCTCGCGGAAGCGACGATGGTCTGCGACGGGAAGAGCCAGGTGATGACCG
AGGCGACGAAACGTTACAACGCAAGGTATTACAGACAAGCACTTACGGGT
GGCGCGCCGAAACTTATCCGTGCGCCTACTACGGTAGAGAAGGCGCGAAA
TCGATCCAAGATAGCGGCCAAGGCAGGAAGGGACCGAGATGCCGCCGCCG
ACCTCGCAGCCGTGAACGAGATATCTCGAGTCAGGACGTCCTCTGCTTCG
ACTTCTACTTCGACACCGCCGCCAGCATCGAAGCGCGCCAGAGGGGACAG
AGATAGAGCGAGTGAAAGAGTCGCTAGCGGGGTGCCTTTGAAGCTTGAAC
AGATCAGCACCCTCACGGACGCAGCCGCGATCGCCTACATGAAAGCCATA
GGGTTGAAGTTGACAGGCAATGTTGCACTCAAGCGGAAGAAACTATCCGA
CTTTTTCGAAAGCAAGAATATTTCAGAGTACAGGTACTCTCCGTCAAGGC
CTGCGACATCGCCCGCGCCCGCCGAAGGACCCGCCAGTGGGCACATGTCG
ATCCGAGGGTTGGGGACTCGAAATATCTGCTGGTGTTGAGTTGGTGTAGA
TGTATTTATCGGCGGGGCCTGCTCTTTCTCCACCTTTGATCCAGACAATT
AAATATTATTTATGATTCCATGCGTGGACCGTCAAGGGTGATGGCTCTGT
CCTCCTCTGTGCGTTTTGTTGTCTGGCGTATGTGTTTGCCTCCTGCGTGG
GAGACGGGATAGATATTCCGTTCGTCTCGTCCCGAACGACCGG back to topCoding sequence (CDS) from alignment at Scaffold_70:94303..96645+ >EsuBft917_2a-0001 ID=EsuBft917_2a-0001|Name=EsuBft917_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1815bp|location=Sequence derived from alignment at Scaffold_70:94303..96645+ (Ectocarpus subulatus male Bft15b)
ATGTTGGAGATGGAGGCCGAGGTAATGGCCAAAAAGAGAGCGTGGTCGCC
GTTCGTTCGGACGTATTCCCGGCCTGCACAAGAGGTTGAGGACGACCTGG
TGAAGTACGTAGGTGACTACGTCAAGCTTGACCAGGCTGCCATCGCCAGG
AAGGAGCTGCCACTGCTGCGCCCGGATTTACCACCAGGCAAATCGGGTCC
TATTGGCGCCATGGCAGCGCTGAACAAGCTCGTCAAGTGCCTCCGGGAAG
GATGCGGCCAGGATCCGTTCGACGTCAACCAAATGTATATCCCGCTTGGT
AGAGGGCCGAAGACTGGGCTCATGAGGTGGTCCAAGAAAGGAGGGACCGG
AAAGAACGAGAACTTCCACGGTGGCATCAACCGCCTGGTGAACGGCGTGG
CTCGGCTCGGTGCGGAAGCGTGCGATGCGAGGCTGCTGCAACGCATTCAT
CGTCACAACCACGACATGGACCGAAAGCTTGGCCGCACCAGCAAGCAGTC
TACCCTGTGGGTCTGGAGGGAGCGTAAGGCGAACGCTGCAGCCGAGTCGA
TCCTCACTTCGCGCCCGTTCCCCCGAGCGGGTGACACTCCGACGGTGGCC
GCGGAGGACTTTGAGCCTATGGGGTTCGAATACGCCGAACAGAGGAGAGC
CAACGCTCTGACAAACGCGAAAACCGCCGCGGCGAACTCGCTAGTCCTCA
CCCGTACTTCTCTGCCGTCAACGACGGCAGGAGATACCAGCCGGGCGGGG
GCCGCGGCCGTCGGGGCAGGAGCGGGGGCTCCGGCGGGGACCGCGGTGGG
TGCATGTGCGAGGGTGATGCCGTTGCCGTTGACCAACAGAGGAGGTCGGC
CGGGAGCGGCGGCGCTCATGCCGTCGACGATAGCGACAGGTTCTTCCGCC
GGTGCGGGGGCCGTGCCGCCACTGCTGTTGCCGCCAACGGCGACAGGAGG
GGCTGCCGAGGGGGCGGGGGCCGTCCCGCCGCTGTTGTTGCCGTCAACGA
CGACAGGAGTTGCTGCCGAGGGCGCTGCGGGTGCCAGTGGCGGCGGGGTG
ATGGGAGGTGCGACCAGCAGGACCTACCGCAGCAACGCTGGAGAAGCCGC
CGCCCAGGACATCTCGCGCGGTAACTACGGGGGGGGGCGGCGTTTGCCTT
CAAGGCACCCGACCCTGGAGAGGGTTAAAGCGTTGACTCCGACAAGTGAT
GCAGAGCTGGAGGCCTTTGCCACCTGTCTCGCGGAAGCGACGATGGTCTG
CGACGGGAAGAGCCAGGTGATGACCGAGGCGACGAAACGTTACAACGCAA
GGTATTACAGACAAGCACTTACGGGTGGCGCGCCGAAACTTATCCGTGCG
CCTACTACGGTAGAGAAGGCGCGAAATCGATCCAAGATAGCGGCCAAGGC
AGGAAGGGACCGAGATGCCGCCGCCGACCTCGCAGCCGTGAACGAGATAT
CTCGAGTCAGGACGTCCTCTGCTTCGACTTCTACTTCGACACCGCCGCCA
GCATCGAAGCGCGCCAGAGGGGACAGAGATAGAGCGAGTGAAAGAGTCGC
TAGCGGGGTGCCTTTGAAGCTTGAACAGATCAGCACCCTCACGGACGCAG
CCGCGATCGCCTACATGAAAGCCATAGGGTTGAAGTTGACAGGCAATGTT
GCACTCAAGCGGAAGAAACTATCCGACTTTTTCGAAAGCAAGAATATTTC
AGAGTACAGGTACTCTCCGTCAAGGCCTGCGACATCGCCCGCGCCCGCCG
AAGGACCCGCCAGTGGGCACATGTCGATCCGAGGGTTGGGGACTCGAAAT
ATCTGCTGGTGTTGA back to top
|