EsuBft90_9a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft90_9a-0001
Unique NameEsuBft90_9a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_65contigScaffold_65:321005..326969 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7G7N2
ProteomeIdEsuBft90_9
Protein domainsPTHR10730
Protein domainsSIGNAL_PEPTIDE_C_REGION
Protein domainsSignalP-TM
Protein domainsIPR006620
Protein domainsNON_CYTOPLASMIC_DOMAIN
Protein domainsSignalP-noTM
Protein domainsSIGNAL_PEPTIDE
Protein domainsSIGNAL_PEPTIDE_H_REGION
Protein domainsSIGNAL_PEPTIDE_N_REGION
Protein domainsIPR005123
Ownerapollo_admin@sb-roscoff.fr
Noteprocollagen- -oxoglutarate 5-dioxygenase os:caenorhabditis elegans gn:let-268 pe:1 sv:1 [Automatic annotation]
Nb exon4
Max annot lvl2759|Eukaryota
Length2994
Hectar predicted targeting categorysignal peptide
Evalue6.12e-234
EggNOG OGsKOG1971@1|root,KOG1971@2759|Eukaryota
Date last modified2016-06-13
Date creation2016-06-13
Descriptionprocollagen-lysine 5-dioxygenase activity
COG categoryM
Cross References
External references for this mRNA
DatabaseAccession
GO0006810
GO0005506
GO0048856
GO0016706
GO0009059
GO0007275
GO1901135
GO0008152
GO0055114
GO0031418
GO0044237
GO0044238
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft90_9aEsuBft90_9aEctocarpus subulatus male Bft15bgeneScaffold_65 321005..326969 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft90_9a-0001-exonagat-exon-75530Ectocarpus subulatus male Bft15bexonScaffold_65 321005..322220 -
EsuBft90_9a-0001-exonEsuBft90_9a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_65 323629..324578 -
EsuBft90_9a-0001-exonagat-exon-75529Ectocarpus subulatus male Bft15bexonScaffold_65 325304..325378 -
EsuBft90_9a-0001-exonagat-exon-75528Ectocarpus subulatus male Bft15bexonScaffold_65 326217..326969 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft90_9a-0001-cdsEsuBft90_9a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_65 321005..322220 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft90_9a-0001EsuBft90_9Ectocarpus subulatus male Bft15bpolypeptideScaffold_65 321005..326969 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft90_9a-0001 ID=EsuBft90_9a-0001|Name=EsuBft90_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2994bp|location=Sequence derived from alignment at Scaffold_65:321005..326969- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCCTCCTCCTGGCCGTCGCGCTGATCGTGCAAGCCGCTCAGGCGGT
CGCCCGGGCCCACCGCTGCACGTCGGTGGCCGCATCCACGGCCTCCCCCT
CGTCTCCGGATAGCGATGCCGCCACCCCCCCCTCTCCCTCCGCTGCTTCC
GCCCAACGGAAGTCGGCGATAGAAGAACGCCGGCCGGGTCCCCCGCCGGC
CACCACCGTTCCTGCTGCCGCCGCCGCCGCTGCCCTGAGTAAACGCAGTG
CTGCCTGCAACCACGGCGGGAGAATCGCTGCCGCGGTCTGCGGTACGGGG
GACGCCTCCCCGCCGGCGGCAAGATCGAACAGTGTTGTCGGCGGCGGCGG
CGGCGGCGACGGCGACGGTGGCGAGGGAAACGATCAGCCGCCGGCGCCTT
GCGGCCCGACAAGCCGGGCCGAGCTCGAGGCCGCCGCGGTGAGGGAGATA
ACGGAGGCGTTCCCCCGGGGATGGATCGCCGACGTCTCGCCCCCCGCGGC
TGCGGCGGCGGCGGCGGCGGCGGCGCCGGTCATCAGAGAGTCCTGGACGC
TTCTCCTCGAGGCGTTGGAGTCGAAGGTCGTGTCCGGCGGGACGGAGGCG
GGGACGGGGGCAGTAGCAGCACTGGTCGAAGAGGGAGGGGGACCTGGGGG
TGGTGCCGTCCTGATCGACCCCGGGAGTTTTCCGCTGCTGCTGGGCCGCC
GTTTCCACGAGAGCGTTGTCAGGGGCCTCGCGGCTAACCTGTTGGAGGTG
GAGGTCGAATCGCCCGTGGTCGAGTACTGCGAAGCGCTGGTCACCCAAGG
TGATGACGTTCAACGCCAGGCACTCAAGGTCCTCGAGCCCACGCTCAACG
ACATGGAGGACGAAAGCGACTTCCCAGATTCTGATGAAATCATCATCGTC
AGCAGCAGCAGTAGCAACGGGGTGGCGAGCGATAGCGAGGGCGAAAGGGA
TGGCAGTGTAGACATCAATGGCCGGAGGGCCCCGGCCACGTCGAGGAGCA
GCACCGAGAACCTTCCCAATAATCTTCCCGAGAACCTTCCCGAGACCCTT
CCTGAGGGCCTTCCCGAGAACCTCCCCGAGAACCGTTCCGAGAGTCGCCG
TTCGGAGAACCGTTCTCGGGAACGCCTGGCGTGGCGCTGCGTGGAGGCGG
CGCGCTCGGCCTCCCGGCTCCTGCCTCGCCTGACGGCTCACGCGCTGCTC
CCGGCGTCCGCCCTCCGGCTGCCCCACTCCTGCACCCCCGCCGCCCGTGT
GCCTGCCGGAGACCGCCGCAGCTACAACGTCGGCGGCGGTGGCGTCGTTT
CTGGTGCTCCGACCGCCGGTGCCGCTGGGTGGCCCTTGGCGGTGGCCACT
GTCGCCCTGAGGGACCTTGCCGCCGGGGAGGCGTTATCCTGCTCCTGGGT
GGACCCGGAAGAGCCGTTTTCGGTCCGGATGGCCAGGCTCGAGGAGTACT
CCCGAGTCCCACCGTGGGCTTCCGATGATGATGATGATGTCCCGACCGCC
GGTGATTGCGCCGCCTCTTCTTGTCCTCTCGAGGGCGGTGTGGGCGGCGG
CGGCGGTGGCGGCAATGACTGCCGAGGTTCAAAAGAGACCGGGGTCTCCG
GGAGAAGCGGCGAAGGAACGCTAGCATCATTACAATTTCCCCGCGGGCGT
GGTTGCGGCTGCCCAAAGTGCCTGGTGGAAAGCGGGGGCTTAGCCGGCGG
CGGTAGCGAAGGGGTGTCGAGCGCAGGGGCGGCGGAGCGGCTGCTCAAGG
TTGCCCAGCAGGCGGTGGATGAAGACCGGGCTCTCCGGCTGTGGAAGGAC
GGTCTGGCCCTATCCCCAAACCACCCGGAGCTGAAGCGAGAGGCGGAAAA
GTACCAGGCACTCGCTTTCTGGCTTGATCCTGGCGAAGGGGATGCCAATA
CCGACGCAAGAAGCAGTAGCAGTGCCCTCTTAGGCGCGGCGACAGACAGC
AGCAGCACCGCCGCCGCCGCCGCCGCCGCCGCCGCGTCGTCCCCTCCGTT
TTCATCGCCACCGCCTCCCCTAACGACAGGCGGCCAGGACGACGGCTTCA
CCGCCCCGGCACAACTGCCCGCCGGAGAAGCTTTCGACAACCTCGACGTG
GACTTCATGGCCGGTGACGGGGAGTGGGTGTGCAGCACGCGGCTTCCCCT
CATTTCGGCATCCGAATGCTCCGCGATCATCAACGAGGCAGAGGAGAAAG
CCTCCGCCGCCGCCGCCGTCGCCGCGGCAGTCGGCAGCGGCGGCGGCGGC
GGCGGCAGCAGCGGCTGGGGGACGTCTAGGCACTACGCCGTCCCGACAAC
GGACGTGGCCGTGCGCGAGCTCCCGCGGACCCTTGCGTGGTTCAACCGGG
CGATGCGGACGCGCATAGGCCCGACGGTTGCCGTCGCCGCGGCGTTGGGC
GGAGGCATTTTCGAGAGGCCGGGCCGCCGGTCCGGTTCGTTGGAGCTCAG
TCCGCCCGTGGCGAAGCCACACGCGAAAGACGAGGATTTCCCCGCTCACG
CGGTTTGCTCCGCTGCTGATAGCGACGAGGCGGCGGCGGCAATCGCGTTG
ATAGCACCGGAGGACGGGCAAAAGGGGCGGCAGGTCGAGAGCGACGACGA
CCAGGAGGGACAGAGTCGGGAGGCTGAAGAGCCACGCGGGAGAGCAGGAG
CACCAACGCCTCCGCCTCCAGCGCTGATGTTGCGGAGGCTCAGGGTCCAC
GACGCGTTCGTGGTGCGGTACGACGCCGCCGCCCAGCGCTCCCTGCCCCT
GCACACGGACCAGGGGGAGCTGTCCCTGACCATCTCCCTCAACGGCACCG
GCGAGTACGAGGGCGGGGGCACGTGGTTCGAGGGTCTCGGCCGCGCCGTC
CGGCCCGAGGAGGCCGGTCACGTGGTCGTGTTTCCGGGGGGGAGGACCGT
GCACGGGGGGAAGGAGGTGACGAGGGGGGTCAGGTATATCCTGGCCGTGT
TCTTGTACGAACATTGGGAGGAGGAGGAGGAGGAGGAGGNNNNN
back to top

protein sequence of EsuBft90_9a-0001

>EsuBft90_9 ID=EsuBft90_9|Name=EsuBft90_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=998bp
MPLLLAVALIVQAAQAVARAHRCTSVAASTASPSSPDSDAATPPSPSAAS
AQRKSAIEERRPGPPPATTVPAAAAAAALSKRSAACNHGGRIAAAVCGTG
DASPPAARSNSVVGGGGGGDGDGGEGNDQPPAPCGPTSRAELEAAAVREI
TEAFPRGWIADVSPPAAAAAAAAAAPVIRESWTLLLEALESKVVSGGTEA
GTGAVAALVEEGGGPGGGAVLIDPGSFPLLLGRRFHESVVRGLAANLLEV
EVESPVVEYCEALVTQGDDVQRQALKVLEPTLNDMEDESDFPDSDEIIIV
SSSSSNGVASDSEGERDGSVDINGRRAPATSRSSTENLPNNLPENLPETL
PEGLPENLPENRSESRRSENRSRERLAWRCVEAARSASRLLPRLTAHALL
PASALRLPHSCTPAARVPAGDRRSYNVGGGGVVSGAPTAGAAGWPLAVAT
VALRDLAAGEALSCSWVDPEEPFSVRMARLEEYSRVPPWASDDDDDVPTA
GDCAASSCPLEGGVGGGGGGGNDCRGSKETGVSGRSGEGTLASLQFPRGR
GCGCPKCLVESGGLAGGGSEGVSSAGAAERLLKVAQQAVDEDRALRLWKD
GLALSPNHPELKREAEKYQALAFWLDPGEGDANTDARSSSSALLGAATDS
SSTAAAAAAAAASSPPFSSPPPPLTTGGQDDGFTAPAQLPAGEAFDNLDV
DFMAGDGEWVCSTRLPLISASECSAIINEAEEKASAAAAVAAAVGSGGGG
GGSSGWGTSRHYAVPTTDVAVRELPRTLAWFNRAMRTRIGPTVAVAAALG
GGIFERPGRRSGSLELSPPVAKPHAKDEDFPAHAVCSAADSDEAAAAIAL
IAPEDGQKGRQVESDDDQEGQSREAEEPRGRAGAPTPPPPALMLRRLRVH
DAFVVRYDAAAQRSLPLHTDQGELSLTISLNGTGEYEGGGTWFEGLGRAV
RPEEAGHVVVFPGGRTVHGGKEVTRGVRYILAVFLYEHWEEEEEEEXX
back to top

mRNA from alignment at Scaffold_65:321005..326969-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft90_9a-0001 ID=EsuBft90_9a-0001|Name=EsuBft90_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5965bp|location=Sequence derived from alignment at Scaffold_65:321005..326969- (Ectocarpus subulatus male Bft15b)
ATGCCCCTCCTCCTGGCCGTCGCGCTGATCGTGCAAGCCGCTCAGGCGGT CGCCCGGGCCCACCGCTGCACGTCGGTGGCCGCATCCACGGCCTCCCCCT CGTCTCCGGATAGCGATGCCGCCACCCCCCCCTCTCCCTCCGCTGCTTCC GCCCAACGGAAGTCGGCGATAGAAGAACGCCGGCCGGGTCCCCCGCCGGC CACCACCGTTCCTGCTGCCGCCGCCGCCGCTGCCCTGAGTAAACGCAGTG CTGCCTGCAACCACGGCGGGAGAATCGCTGCCGCGGTCTGCGGTACGGGG GACGCCTCCCCGCCGGCGGCAAGATCGAACAGTGTTGTCGGCGGCGGCGG CGGCGGCGACGGCGACGGTGGCGAGGGAAACGATCAGCCGCCGGCGCCTT GCGGCCCGACAAGCCGGGCCGAGCTCGAGGCCGCCGCGGTGAGGGAGATA ACGGAGGCGTTCCCCCGGGGATGGATCGCCGACGTCTCGCCCCCCGCGGC TGCGGCGGCGGCGGCGGCGGCGGCGCCGGTCATCAGAGAGTCCTGGACGC TTCTCCTCGAGGCGTTGGAGTCGAAGGTCGTGTCCGGCGGGACGGAGGCG GGGACGGGGGCAGTAGCAGCACTGGTCGAAGAGGGAGGGGGACCTGGGGG TGGTGCCGTCCTGATCGACCCCGGGAGTTTTCCGCTGCTGCTGGGCCGCC GTTTCCACGAGAGCGTTGTCAGGGGCCTCGCGGCTAACCTGTTGGAGGTG GAGGTGAGGGCGGGGAGTGGAGACGCTTGCTTCGCACGCGATGTTTTGAA TCTTGTCGGCGGATTGATTTGTGTGTGGTAATGATTTGGGCACCTGAGGG CTTCGGGAGGCGGGTGTGTTCGGTCGGGCTACCTGCTGTGTGCCCGCCAC CCTAGTGCGTCACAGACAAGTTTATCTCCCGCATCGGCTTGTGATAGCGA GCGGAGACAAGTTCAAGAGGCAATATGCTCGGGATGAGTTGCCCTCGTTT TCCCACCGGTGCACGTTGTCGAAAAGCGGTACGATAGCCCAAGGGTTCTA GGCCCCCAACGTCATTGTTCTTGTTCGAGCCAACACAAGAGGAGAAAAAG CTCTTGGCGTATGTTGTGTTTGGGCCAGCGAGCTCTGGTTTTCGTTGAGA GGTTTTGCCGAGCTCTCCTCACCCCCCCCACCTCCCCTAAGCCGCTCTTA TTCATCGTGTTCCCTCGCTTCCTTTCCCCCCTTTCCCCCGTCGTGATCTG CGTCTTCCTGTTCTATCTTTGTCTCCTCCGCCCCCCCTGTCTGTCCTGTC TTCTGCCTGTCTGTCCGTCTGTTTGTCTATCTATCTATCTCGCTATCTGT AAATCCGTCTATCCGTTTGATCTTTGTACCTCGTCTCTCAACCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC CCCCCCCCTCTCGCTATGCTTTTGTATATCTTATGGATCAGGTCGAATCG CCCGTGGTCGAGTACTGCGAAGCGCTGGTCACCCAAGGTGATGACGTTCA ACGCCAGGCACTCAAGGTACATGTAATGCTGTGCAGCGCTGAGTTGTACC CAGCCATTGAAAGTGAAGCAGCCGGCGCCAAACAGCGGTGCTGTTGTGAG GTTATTCGGGGTTGTGCTCGACGCGTCTTCTTCGCCTATCCACGGTCGAT ATTCGTCGAGATCAGCAATCTCTGCACATCGTTTTGTTATTTTGCGTAAT GGAACCCAAGCTAGCTTAAGATTCCAAGGAGTCGGTCTTGGGTAGGAAGG TTCCTGTTCGCCCAAACTGTTGGATGTTCGTCTACCGGTGTTGTCACCCG ATGCGCTTCATTCTCCGTGGAGGGTGTGCCAGTACAACAGGAAACAACGG GGTGTCAGCACAAGCAGCTCCGAAATGGGAGCCCGTTCTGTCCTGGTTTT CCATCCATGTGCCCACGGGGCCTTGTGCGAAGCATGTTGTACCTTAAGGA GTTCTGGTTCTTTTTGGACTTCAATTAGCGGTTGACAGCAAACACGTCAT CCCCGCGACACGCCCTCATACGTCTCCATCTGTCTTTGTTTTTCTCCCTC CCTCTCGCTCTCCCTCCCTCTTTCTTCCTCTCCCCTAGCGTTTAACATGT GCCTTGGTTAAAGCGTCACCCTTCCACTCCCCATTTGGTTCTCTATCGAC CTCTCGACATGCCCACCTTCTTACCTGGCCGGGTACACAACCTTTTTACT CCCCGACCTGTTCCTTTCTCATGCTTCTTCAACGCCTGCAGGTCCTCGAG CCCACGCTCAACGACATGGAGGACGAAAGCGACTTCCCAGATTCTGATGA AATCATCATCGTCAGCAGCAGCAGTAGCAACGGGGTGGCGAGCGATAGCG AGGGCGAAAGGGATGGCAGTGTAGACATCAATGGCCGGAGGGCCCCGGCC ACGTCGAGGAGCAGCACCGAGAACCTTCCCAATAATCTTCCCGAGAACCT TCCCGAGACCCTTCCTGAGGGCCTTCCCGAGAACCTCCCCGAGAACCGTT CCGAGAGTCGCCGTTCGGAGAACCGTTCTCGGGAACGCCTGGCGTGGCGC TGCGTGGAGGCGGCGCGCTCGGCCTCCCGGCTCCTGCCTCGCCTGACGGC TCACGCGCTGCTCCCGGCGTCCGCCCTCCGGCTGCCCCACTCCTGCACCC CCGCCGCCCGTGTGCCTGCCGGAGACCGCCGCAGCTACAACGTCGGCGGC GGTGGCGTCGTTTCTGGTGCTCCGACCGCCGGTGCCGCTGGGTGGCCCTT GGCGGTGGCCACTGTCGCCCTGAGGGACCTTGCCGCCGGGGAGGCGTTAT CCTGCTCCTGGGTGGACCCGGAAGAGCCGTTTTCGGTCCGGATGGCCAGG CTCGAGGAGTACTCCCGAGTCCCACCGTGGGCTTCCGATGATGATGATGA TGTCCCGACCGCCGGTGATTGCGCCGCCTCTTCTTGTCCTCTCGAGGGCG GTGTGGGCGGCGGCGGCGGTGGCGGCAATGACTGCCGAGGTTCAAAAGAG ACCGGGGTCTCCGGGAGAAGCGGCGAAGGAACGCTAGCATCATTACAATT TCCCCGCGGGCGTGGTTGCGGCTGCCCAAAGTGCCTGGTGGAAAGCGGGG GCTTAGCCGGCGGCGGTAGCGAAGGGGTGTCGAGCGCAGGGGCGGCGGAG CGGCTGCTCAAGGTTGCCCAGCAGGCGGTGGATGAAGACCGGTGAGGGGG GGGCGTCTAAATATCCGGCTGAATCGCTGCCTGAGAGCAAGAGGATGCTT TGATCTCCCCGGTTGGTTTGGCGTTTAGCGGATTGTTTTGGTTCCGGGAA GCTGGAGTGATTGGCCAACCTGTGACGGTGGTTGACAGTTATAAGTGCTG GTGCGCGGCGGCAACGTGTGGTGTAAACGCCACGGCATGATTGTCTTCAC TCCCCCCCAGCCTCCCATGTACAAATGTGTCGCGTGGTAGAAGGCGGTAG TTTCTGACAAAAAAGTGTTCTGCGACGTACCCTCTTGCCAGGATCCTCCC TTACCCGGGTAATGTAACCATGCCATCAAGGTCAGACCCTTATCTAAGCG CATGATGTCCATGCGTCCCCCCCTTCTCGTCCCCCTCCCCCCCCCCACCG ACTTCCTCCATCTTCAAGCTTCGACGATGCGTTCGAAGCGTTATCAAGGG CAGCCAGGGCTGCACCGGACAACGCGGATGTCCTCTACCGAGCCGGTGTT TGCGCCATTAACCAGGGACGGTGGAGCAGGTGCAAATTGAAGCTAACCAG TAGACACTTAGTTCCCGTCAGCGGGGCGGGGCAGTGAGATTTGTTTTTCC TTCTCCAGGCTTTGGCACACGCAGGATCTCGTTTTGTCGCAGTGCAGTTC TTCCCAGGGAAGGGTTCAACTCTTCCACGCATTGCCTCAATGCTCGTGGC AAAGGCCCGCGACACGCTTCTTAGAACGCGCCATGGACTGGCTTTAGGCT TTACGATGAGTGAGTGGATGGATGGATGGATGGATGGATGGATGGGCACA TTGACTTTACCTCCACCATGGGTGAGGGTGTGGATAGCTGAAATAGATAT GTGCCGCACGACCCCGGCAGCGCCATGCGTGGACATCGTCACCGCAGTTC ACGACTTCACCGATGCTCGCCGCGAAGAAGTGTTCCGATCTTCTGCGCCA GCCTTTCCTGCCCGCGGGCGTAGTAGCCGGTCAATAAGGTTGCGGAGGAA CCGGTGGCTCTGCGCTCAGCGCCAACGTATGTAGCCGATTTTTCGGAACC GCCGTCGATCCTACCCCCTGCCATGTTAACGAAGCGTTAGCTTCCTCCTA GGTTGAAAAAACTCCGGCGGATTTAGTTTACGCAGGCGACGCGTGGTGCA CACAAGTACCGTGGCCGTGGTACGCTGTCGGGCGTTGTGGAGGCCTGTGG TATTGTTTTGATCCTCGCCTCCGCGTTGGACATGGTTCTGGCTGTGCCAG ACGTGGACCGGGCAGGATCCCACGCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGCTGCTGCTGCTGCACAGG GCTCTCCGGCTGTGGAAGGACGGTCTGGCCCTATCCCCAAACCACCCGGA GCTGAAGCGAGAGGCGGAAAAGTACCAGGCACTCGCTTTCTGGCTTGATC CTGGCGAAGGGGATGCCAATACCGACGCAAGAAGCAGTAGCAGTGCCCTC TTAGGCGCGGCGACAGACAGCAGCAGCACCGCCGCCGCCGCCGCCGCCGC CGCCGCGTCGTCCCCTCCGTTTTCATCGCCACCGCCTCCCCTAACGACAG GCGGCCAGGACGACGGCTTCACCGCCCCGGCACAACTGCCCGCCGGAGAA GCTTTCGACAACCTCGACGTGGACTTCATGGCCGGTGACGGGGAGTGGGT GTGCAGCACGCGGCTTCCCCTCATTTCGGCATCCGAATGCTCCGCGATCA TCAACGAGGCAGAGGAGAAAGCCTCCGCCGCCGCCGCCGTCGCCGCGGCA GTCGGCAGCGGCGGCGGCGGCGGCGGCAGCAGCGGCTGGGGGACGTCTAG GCACTACGCCGTCCCGACAACGGACGTGGCCGTGCGCGAGCTCCCGCGGA CCCTTGCGTGGTTCAACCGGGCGATGCGGACGCGCATAGGCCCGACGGTT GCCGTCGCCGCGGCGTTGGGCGGAGGCATTTTCGAGAGGCCGGGCCGCCG GTCCGGTTCGTTGGAGCTCAGTCCGCCCGTGGCGAAGCCACACGCGAAAG ACGAGGATTTCCCCGCTCACGCGGTTTGCTCCGCTGCTGATAGCGACGAG GCGGCGGCGGCAATCGCGTTGATAGCACCGGAGGACGGGCAAAAGGGGCG GCAGGTCGAGAGCGACGACGACCAGGAGGGACAGAGTCGGGAGGCTGAAG AGCCACGCGGGAGAGCAGGAGCACCAACGCCTCCGCCTCCAGCGCTGATG TTGCGGAGGCTCAGGGTCCACGACGCGTTCGTGGTGCGGTACGACGCCGC CGCCCAGCGCTCCCTGCCCCTGCACACGGACCAGGGGGAGCTGTCCCTGA CCATCTCCCTCAACGGCACCGGCGAGTACGAGGGCGGGGGCACGTGGTTC GAGGGTCTCGGCCGCGCCGTCCGGCCCGAGGAGGCCGGTCACGTGGTCGT GTTTCCGGGGGGGAGGACCGTGCACGGGGGGAAGGAGGTGACGAGGGGGG TCAGGTATATCCTGGCCGTGTTCTTGTACGAACATTGGGAGGAGGAGGAG GAGGAGGAGGNNNNN
back to top

Coding sequence (CDS) from alignment at Scaffold_65:321005..326969-

>EsuBft90_9a-0001 ID=EsuBft90_9a-0001|Name=EsuBft90_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2994bp|location=Sequence derived from alignment at Scaffold_65:321005..326969- (Ectocarpus subulatus male Bft15b)
ATGCCCCTCCTCCTGGCCGTCGCGCTGATCGTGCAAGCCGCTCAGGCGGT
CGCCCGGGCCCACCGCTGCACGTCGGTGGCCGCATCCACGGCCTCCCCCT
CGTCTCCGGATAGCGATGCCGCCACCCCCCCCTCTCCCTCCGCTGCTTCC
GCCCAACGGAAGTCGGCGATAGAAGAACGCCGGCCGGGTCCCCCGCCGGC
CACCACCGTTCCTGCTGCCGCCGCCGCCGCTGCCCTGAGTAAACGCAGTG
CTGCCTGCAACCACGGCGGGAGAATCGCTGCCGCGGTCTGCGGTACGGGG
GACGCCTCCCCGCCGGCGGCAAGATCGAACAGTGTTGTCGGCGGCGGCGG
CGGCGGCGACGGCGACGGTGGCGAGGGAAACGATCAGCCGCCGGCGCCTT
GCGGCCCGACAAGCCGGGCCGAGCTCGAGGCCGCCGCGGTGAGGGAGATA
ACGGAGGCGTTCCCCCGGGGATGGATCGCCGACGTCTCGCCCCCCGCGGC
TGCGGCGGCGGCGGCGGCGGCGGCGCCGGTCATCAGAGAGTCCTGGACGC
TTCTCCTCGAGGCGTTGGAGTCGAAGGTCGTGTCCGGCGGGACGGAGGCG
GGGACGGGGGCAGTAGCAGCACTGGTCGAAGAGGGAGGGGGACCTGGGGG
TGGTGCCGTCCTGATCGACCCCGGGAGTTTTCCGCTGCTGCTGGGCCGCC
GTTTCCACGAGAGCGTTGTCAGGGGCCTCGCGGCTAACCTGTTGGAGGTG
GAGGTCGAATCGCCCGTGGTCGAGTACTGCGAAGCGCTGGTCACCCAAGG
TGATGACGTTCAACGCCAGGCACTCAAGGTCCTCGAGCCCACGCTCAACG
ACATGGAGGACGAAAGCGACTTCCCAGATTCTGATGAAATCATCATCGTC
AGCAGCAGCAGTAGCAACGGGGTGGCGAGCGATAGCGAGGGCGAAAGGGA
TGGCAGTGTAGACATCAATGGCCGGAGGGCCCCGGCCACGTCGAGGAGCA
GCACCGAGAACCTTCCCAATAATCTTCCCGAGAACCTTCCCGAGACCCTT
CCTGAGGGCCTTCCCGAGAACCTCCCCGAGAACCGTTCCGAGAGTCGCCG
TTCGGAGAACCGTTCTCGGGAACGCCTGGCGTGGCGCTGCGTGGAGGCGG
CGCGCTCGGCCTCCCGGCTCCTGCCTCGCCTGACGGCTCACGCGCTGCTC
CCGGCGTCCGCCCTCCGGCTGCCCCACTCCTGCACCCCCGCCGCCCGTGT
GCCTGCCGGAGACCGCCGCAGCTACAACGTCGGCGGCGGTGGCGTCGTTT
CTGGTGCTCCGACCGCCGGTGCCGCTGGGTGGCCCTTGGCGGTGGCCACT
GTCGCCCTGAGGGACCTTGCCGCCGGGGAGGCGTTATCCTGCTCCTGGGT
GGACCCGGAAGAGCCGTTTTCGGTCCGGATGGCCAGGCTCGAGGAGTACT
CCCGAGTCCCACCGTGGGCTTCCGATGATGATGATGATGTCCCGACCGCC
GGTGATTGCGCCGCCTCTTCTTGTCCTCTCGAGGGCGGTGTGGGCGGCGG
CGGCGGTGGCGGCAATGACTGCCGAGGTTCAAAAGAGACCGGGGTCTCCG
GGAGAAGCGGCGAAGGAACGCTAGCATCATTACAATTTCCCCGCGGGCGT
GGTTGCGGCTGCCCAAAGTGCCTGGTGGAAAGCGGGGGCTTAGCCGGCGG
CGGTAGCGAAGGGGTGTCGAGCGCAGGGGCGGCGGAGCGGCTGCTCAAGG
TTGCCCAGCAGGCGGTGGATGAAGACCGGGCTCTCCGGCTGTGGAAGGAC
GGTCTGGCCCTATCCCCAAACCACCCGGAGCTGAAGCGAGAGGCGGAAAA
GTACCAGGCACTCGCTTTCTGGCTTGATCCTGGCGAAGGGGATGCCAATA
CCGACGCAAGAAGCAGTAGCAGTGCCCTCTTAGGCGCGGCGACAGACAGC
AGCAGCACCGCCGCCGCCGCCGCCGCCGCCGCCGCGTCGTCCCCTCCGTT
TTCATCGCCACCGCCTCCCCTAACGACAGGCGGCCAGGACGACGGCTTCA
CCGCCCCGGCACAACTGCCCGCCGGAGAAGCTTTCGACAACCTCGACGTG
GACTTCATGGCCGGTGACGGGGAGTGGGTGTGCAGCACGCGGCTTCCCCT
CATTTCGGCATCCGAATGCTCCGCGATCATCAACGAGGCAGAGGAGAAAG
CCTCCGCCGCCGCCGCCGTCGCCGCGGCAGTCGGCAGCGGCGGCGGCGGC
GGCGGCAGCAGCGGCTGGGGGACGTCTAGGCACTACGCCGTCCCGACAAC
GGACGTGGCCGTGCGCGAGCTCCCGCGGACCCTTGCGTGGTTCAACCGGG
CGATGCGGACGCGCATAGGCCCGACGGTTGCCGTCGCCGCGGCGTTGGGC
GGAGGCATTTTCGAGAGGCCGGGCCGCCGGTCCGGTTCGTTGGAGCTCAG
TCCGCCCGTGGCGAAGCCACACGCGAAAGACGAGGATTTCCCCGCTCACG
CGGTTTGCTCCGCTGCTGATAGCGACGAGGCGGCGGCGGCAATCGCGTTG
ATAGCACCGGAGGACGGGCAAAAGGGGCGGCAGGTCGAGAGCGACGACGA
CCAGGAGGGACAGAGTCGGGAGGCTGAAGAGCCACGCGGGAGAGCAGGAG
CACCAACGCCTCCGCCTCCAGCGCTGATGTTGCGGAGGCTCAGGGTCCAC
GACGCGTTCGTGGTGCGGTACGACGCCGCCGCCCAGCGCTCCCTGCCCCT
GCACACGGACCAGGGGGAGCTGTCCCTGACCATCTCCCTCAACGGCACCG
GCGAGTACGAGGGCGGGGGCACGTGGTTCGAGGGTCTCGGCCGCGCCGTC
CGGCCCGAGGAGGCCGGTCACGTGGTCGTGTTTCCGGGGGGGAGGACCGT
GCACGGGGGGAAGGAGGTGACGAGGGGGGTCAGGTATATCCTGGCCGTGT
TCTTGTACGAACATTGGGAGGAGGAGGAGGAGGAGGAGGNNNNN
back to top