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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft904_10 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Length | 141 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-26_001190.2 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft904_10a-0001 ID=EsuBft904_10a-0001|Name=EsuBft904_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1410bp|location=Sequence derived from alignment at Scaffold_553:956024..962798- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TTTCAGGTTTATCTTGCCAGCTCGCCTCTCTGCCCTGCTCTCTCACCCCC ACCCTCTCGCTATTGAGTCTTTGATGAGGGAAGGAGGAACTCGAACTAAT TCAGGATACACACGGCGGGATGGCGGAATTCGCAAGGACGGCGAGATTGC AAGGGGACGACAGCAGCGGAGAAGGGGCGATGGCGGAAGGGCTGGCGACG GCATTCCAGTGCTTTCAGGACGGGATGGGGGAGAAGCTGATCTCCCTGGC CCAGCAGCAGTCGGCGCTGTTGTCGAAGCTTGAGGCCTCTCGAGAGGCCC TGCCGGTGTCTTCCACCGGACGAACGCGAGACCGTAGTGGGCGCGCCGAG TACAACGAAGACGTTGAATTCATCGCCAAGATCATGTCCCAGGCCCCATC GTACGCCCAACGTGTGCGGGCGCTCGCCCAGCAAAAGGCATCGCTAGATG CGCGGATGGTCAACCTCCAGCGAAGAAGCACCGGGCTGAGGGAGTCTCTG CCCGTACCGATGCAGCGTCACCTAGCCGAACGGTTAGAAGCGTCTTGCAT GGCCCCGTTTCGGGAACAGACGGATATGGCGTTCGTGACGTGCTACCAAG GGGGTGTCGCCATAAGAACGGCACCGAGTCTCGATGCGCCATGCGCGGGG GATATTTTGCAATGGAACGAGGCGAGTGGAGTCTTTTGGGCTTCCGAGCG ACTAGGGCGGTTAGGGGAGGACATGATCTACGTGAAGCTGAGGGACGGGC GGGGGTGGGTTTTCGAGACCCTCCACGGCAAGAAAGTGCTGGAGCGGGTA GCCCTGTCATCGATGGAAGACATTGAAGATGCTGGCCCAGCTGCAAGCGG CAGTAGTAGTAGTAGTGTCTTAGAAGGAAATGATCGATGACTTGTGTCGT CAGATCTACTACACGGATTTTTTTTATGTATTTTGTTCTCGTCGACGTTT TACTTACGAGAAGTGCAAATATGTACAGTACATCCTACGCGCGGAAATCT CTGTCTATCTTGGATGGCTCCGTCAGGGCAACGGCTCTGAAGATGTTTGA TGCTTGATGCTCGGAACATAGACCCAAGGGGGAAGGTTGACGTGCCGGTG GTGTGGCAAGATAACGACAGGAGAAGAGCCGCTGCTGGAGAATGAGTCGG GTTATAGCATCTAGGGCCCCCACTCCAGGTAACAACAATATGATGAGAAA GAGATTACTTTTGGCGCAGGTTCGCGAATCTTTGAAAATGGGGCTAAGAA ACGTAGCCTTACCTGAGGGACAGGATAAGAAACATACCTGGTGCTCCTGG TATGAAGAACCTCGTGTTGCTGCAAGCCATGTTTGGGTGCGCCGCGGTTG GCGTGATGCACGGAACGCATGACCAACTCTCAGCTTGGACTACATGATCA TACCGACGCC back to topprotein sequence of EsuBft904_10a-0001 >EsuBft904_10 ID=EsuBft904_10|Name=EsuBft904_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=236bp
MAEGLATAFQCFQDGMGEKLISLAQQQSALLSKLEASREALPVSSTGRTR DRSGRAEYNEDVEFIAKIMSQAPSYAQRVRALAQQKASLDARMVNLQRRS TGLRESLPVPMQRHLAERLEASCMAPFREQTDMAFVTCYQGGVAIRTAPS LDAPCAGDILQWNEASGVFWASERLGRLGEDMIYVKLRDGRGWVFETLHG KKVLERVALSSMEDIEDAGPAASGSSSSSVLEGNDR back to topmRNA from alignment at Scaffold_553:956024..962798- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft904_10a-0001 ID=EsuBft904_10a-0001|Name=EsuBft904_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=6775bp|location=Sequence derived from alignment at Scaffold_553:956024..962798- (Ectocarpus subulatus male Bft15b) TTTCAGGTTTATCTTGCCAGCTCGCCTCTCTGCCCTGCTCTCTCACCCCC
ACCCTCTCGCTATTGAGTCTTTGATGAGGGAAGGAGGAACTCGAACTAAT
TCAGGTGTGGCATATTTTGAAACAGCGAGTCAAAATGACTTCAAAGTGGA
GCGAATTGTTTATAATAGTTCTCATCTCGCCCATGATACACTCAGAAACC
GACTTGATACAACAGGAGTGCTACGGAGTGCTGGACAGGTAACAAATTTA
GATGCCACAATCCGGTGCGACAGCAGCATTGACGCATGGCGATACTCACG
GTCCAACTGGGATCTTGTACCTTGTACAGGAGTCGATAGCACGGGGAACG
AACAACTGAATTCTGCCACGTTTTGGTCTCTGGCGGAATGATGCTCATCA
TGTGGGCATGAAAACAGGCTCAAACAGTGTATCCAGTAGGTATTTCTGCA
CTCACTGCCGCCAAGACTTTAACCCCCCCCCGATGGACGTGTCACAGTTT
CTCGGACGGGTACTCTCTCTGTGTCGGTAGTACCGTATATATGTTCTAAA
ATGCAAAGGACAGCAAATAGCCATGGCGCTCCTTGGCTGTCGCCACGGAA
GCCCTCCTGCCCTCCGACTCCGCCTGCTAGACTATTGCTGGTACGTTTGT
AGGGCTGCTGTCTAGCTGCACACAACCGGCCGCTGGTTTTCGGCAACGCA
CATTTTGTTGAAACAAACTCCACAGCAACCCACCTCGCGCGACACTTGAC
ACGCTCAAAGATTTTTTACAGTACTGCTACTTCCGGGAGCGGACAGTTGG
CGATGCGTGTGGGTGCCGCACGGCCAGTGCGCCAATGAATCGTATTCGGT
CCAGTCACGGGTAACGCCAACATGTCGTCAACTCATCATGGGGGGTGCAT
ATGGCGTGCAGTTCGGGCGTCGAATCTGCAACACTCCATAGCTTTTGCCG
TTGTTTTTCCTCCACCCCAAGACGGAGGCCGCAACGTGGTTTAGTTGGTA
GCCTCGCAACCTCCTGGCGTTTAGGAGTGGGTTCGTCCAGGTGCGGTCAC
ACGAAGTGGAATTTTCTCACAACATGGCCAAACAATGTGGCAGCGACACC
CCCGTGTGTACCGCTTGCTGTCCGCCAAAACACTGGACGTTCCGGTCGAC
GAGGGAATGGAACGGCCAAACCCTGCTCGCGAAAAAATCAATGCAAACAC
CGCAGATGGAAGGTGGAGAAGCCACTTCGGTGACCTTCCTTCCTCCTGTG
TGGCTGACCTCGGCTGGTGCGCCCAGAAATTGTAACGAAACGTGTACCGC
CCGACGTCCAGATACACATGATGAGAAAAAGGATGACTAAATATTTATAG
ACTATGTTCCCGCTTGTGTCCGTGTAGCAGAAGCTTCATTGTAGTTACTT
CGAAGTATTATTTTTTTGCTAAAAACACAGTCCTTCTTCCGCGGTACCCC
CCTCGTCAACCTTGGGTTTAGTAAGGCAGATAATGTGTAGCAGTTTTTGA
CGTTACTGTTTTAATGTTGTAAGGCTGGCACACGTTAAAAGGCCTTGCTC
AACCCACGTTGGGGGAGGGTCCCGGGGGCCGAAGGGTGTGATTGGCCAAG
AAGAAAACGAACGATGAGTCCTTTCGCTGTCCGGACAAGCGGGACTTCGG
TATTGATTGAAGGAAGAAACGGAGGCAAAAGCAAATGATTTTTGCGGAAT
CGAAGTACCCGAGGTGGGACTGCGCCCCATTTGCACCCTCCATGTTGAGC
TGACCTCGTGTTGGCGTTACCCCAGACCTGACCGCATGTGGCACACGGGC
CGTTATGCCGACACGCATTACCCATTGCCCATCCCTGGAAATTGGAAATT
ACAATGATTCTGTGATCGTGCCAAGGTTTCGCACTAGATGGGTTGATGTA
GATCTTGGTTCCCAAAATGTGCGATGTCGAACGCTTACGGCCGGTGATGT
GCAGCGAGACAGTCCAAACAAAAGTGGTACTGTAGGGCAAGGCTGAGGGT
GAGGCTTGGACCACTGGCACCAGCTGCTCATGCTTTAGCTTGGTGCTTGT
GCTGATATGTGTTTGCAGTTTTCCTGTGGATCACACGGCCTACGCTCCAC
CTGTATTTGGTGACAGCGACACCTCGAGGCAGCTATTCCGCCGCACTTGG
GTGCTACTGAACCTCGAATCGGCATTTGGATTGTGGAAGATATTGTTAAA
ACGGCACAAGCTCTTCTTCTCATTCACCTTAACCCTATATGGGTCCTCCT
AATTGGCTGTTCATTTTGGGAACCGTAAAGCATGCCCGTACGGGACGTAT
CTCCAATCGTGGTCCCAGAAGGGCTTCTCGCCGAGAAGCCCCCCAACCTC
CTTATCGCGGTGTTTCTCTTGCAGTGAGGCGAAGGGCGAGGAAGGTTTCT
GGCGCTTGGTGCCCGCTCGAGCGTGCTCCAGAGCTCCACCTTCTGCTCTC
TGCTGTGTCGATACGCCACAGAGGTGGTCCCCGCCCCACCCATTCCACAA
CAAACAATTCTGGTTAGAATGCCGGAGTTTATTGTCAACCGCCTGGGCGA
ACGGCTACAAGCAGTGCGTCCGTCCCTTGTTAACTCCCAACCGTCCCGCC
CGCTGTGTTAACCCCAAGTCACCTCTCACCCGCCTACGTAAATATCCGTG
TTCCTTGTGCTGTTGTTTTCAGGATACACACGGCGGGATGGCGGAATTCG
CAAGGACGGCGAGATTGCAAGGGGACGACAGCAGCGGAGAAGGGGCGATG
GCGGAAGGGCTGGCGACGGCATTCCAGTGCTTTCAGGACGGGATGGGGGA
GAAGCTGATCTCCCTGGCCCAGCAGCAGTCGGCGCTGTTGTCGAAGCTTG
AGGCCTCTCGAGAGGTGAAGGGTTTTCTTGAATGCGTCTCATGTATAGTG
TCGAAGAGAGGGGATGAATAGACTGATTGATGCCGTAAGGGGCGGAGAGA
CAGCACGCCCAATACGCGGACTTTGAAAACTCCATTGCTCCATAACCAAG
TAGATGCGGAAAGAGACCGATACTTCTACGGAGAGCCTTCGACGAGAAGC
TTGAAGAACCACCATTGTTGGTGTTGGCACTACTGTAGCTTGGTTGTGGA
GCAATCGAGCTTTGAAAATCGGTCTAGGGGCGGTGCCATCCGCCTCTTAC
GGAATGCCACGGTACGGTATACCACGGTACGGAATACCACGGTACGGTAC
AGGCAATCTTGGCTGTGGAGCAAACCAGCTTCGAAAAGCGGTCTAGGGGG
GGTGCCATCTCTCCGCTCTTACGGTAGTAAGTAATATACGGAGTAAATGT
GTCAATCGCTGAAACACTACGCGTTCGGGGTAATACCACGGTAATCTGAG
GGGATGTGTTGTGTTTTGATATTCCGGGATGTGTTGTGTTTTGATGTTCC
GGTTGTTTTTTGTTTCAGTTTCGGGGACGCCATAATATTTTTAGTCTTCT
TCCGGCCTGCTTGGCGCTGCCCTGGGTGCCATCGGTAACGCTTCACCCGC
GTGCGACGCCCGGCGTCCACTCGGTAATGAGGTGGTTCGTGTCAGCCACG
AGTCACGTCAACCACGACGGACTCGGGCTTTCCACGAGCGATACGGTGCC
AGAACAACCCTTTTATCCCGCGCCTGAGTGTCTGTTGCCAGAGGACGTGA
TGTTCACCCGCGCGGGTTTTCCGCGGCAAGGCAGGCGTCACGTTTTGGCG
TACGGCCGTCTGACCTACTTTATGGACCCTTTCCCCGGCTCACGAGCTAG
CTCACGACCGCTGTCTTTCTCCCTCCCCCCCCCTCTTATCTCCGGTCTTG
ATTGGCACCTTTAAACGTGACTGATTGTGAAAAGACAGGCCCTGCCGGTG
TCTTCCACCGGACGAACGCGAGACCGTAGTGGGCGCGCCGAGTACAACGA
AGACGTTGAATTCATCGCCAAGATCATGTCCCAGGCCCCATCGTACGCCC
AACGTGTGCGGGCGCTCGCCCAGCAAAAGGTAACCAGAGATAGCTTAGGA
GATAAAGCTTGGGGGGAAGGTTCTTGGTGCTTCACCAGGGTTACAACTTG
GAAGTTTGTCTTATATATTGGAGTATAGAGGATTGTCCGGTGCACAAGGA
GCAGGAAGGCGGTGCGGTTTTTTGCGCCATTTCGGAGCATGGTTGGTGGC
CGCTCCCGCGCCCCCTCTCGCGCGGCCCTCATGGCGCCGTCCATTGCTTC
GTGTCGCGTTGACGCTCGGTCTTACTGCAGCACCTTTGATGGGTTTCATT
CTATGTTTTTGCCGAAGTACTACGGTCGACGCGCAGAGTCCTAACGCGTC
GCGCTTCATGGCTATGAACTTCGCGTCCTTCAGGCATCGCTAGATGCGCG
GATGGTCAACCTCCAGCGAAGAAGCACCGGGCTGAGGGAGTCTCTGCCCG
TACCGATGCAGCGTCACCTAGCCGAACGGTTAGAAGCGTCTTGCATGGCC
CCGTTTCGGGAACAGGTGAGGCCCGTGTGTACAACGCTTGTAGCCGAACA
TAAATCGGACGGCGGTACGTTGTGCCTTTGTCCTCGTTGTTGTTGTTGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTTGTTGCTGTTGATGTTGCTGTCGTACGTGTGTTGTGCACGTATCAC
CCTGCCTTGATAGATTTGATATTTTCCGTCATTTTTCCGAACGGGGTTGC
TTGGAGCCGAGCTAGCATCGACCCCCCCCCCTCCCCCCGCCACCGTAAGT
AATCCGACCCACCCCTGCCAACCTATGCCGGTTTCAGACGGATATGGCGT
TCGTGACGTGCTACCAAGGGGGTGTCGCCATAAGAACGGCACCGAGTCTC
GATGCGCCATGCGCGGGGGATATTTTGCAATGGAACGAGGCGAGTGGAGT
CAGTCCTTTCTCCCTGTGACAGCTCTGACACGTGGGGGGTGCGTTTCGGT
AGACCGGCTGTTGGCATTTTCGACGTGACGTTTCGTGCAGGGCTGATACC
GTGTCTCTGTATTTGGCACCCGTTGCCAGGGGGCGCGCGGTGCGAGTAGT
TCCAGAGGCAAGCAATGTTAAGATATGTACGTGTCTGATGATAGTAAAAA
CGACTCAGACAGCAGCGGTATGCTGATACACACTCACAACACGCTCAGAT
CGAGGTGAAGCTACTGGTGGTTGGACAAGTGTGCAAAAACCCGTTGGTGA
TGGTTTATAGTCGTATTATGGTGATGTGAGCATTGCTCAGGCTACAGCTT
AAGTGCCGAACTAGGAGAGGGAAAATTGGGAGTGAGCTCGTTGGGCGAGC
TCGTCCTCTGTCTGTTTACAAACTCCAGAACCGAAAGACTGGTCCGGAAA
CGTTCCGGAGTCCTATGTACCTTTCTACTTGGTCGGGCAACAGTTCTGGA
ACTACGCTTGCATCGTTCCACGTGGTGTGTACTCAAAGTACCGTTCCTGC
CATCACGTGTTGTTCCTCTCAACGTTCTGGAGAACTGGTCCAGGAAACTC
AGAAACTTCTTGAAATATTCCTCGGGGGAAATATGCATTCTACCCAGTAG
ACTCTCCGCATACGCTACGCTTTTCTCCACAGGATGGATCCTTGCATACA
GTAACCATACAGCGTATTCAAGCATACTGTAACCAAGAGTGTTACTGTTG
TATTTCTCAAAAACAAACAAGCTGCTTCAGAGCCCACCTGGTGAGTCCGT
AGGTTCGAAGTTGCCAGGTTTGGCCAATGATTGGGATGACGAAAATGGGA
AGTAGCCCCCCAGGCGCGGTCCCTCCAAGGTGTGAGCGAAGGGGGAGGCC
GCGCCACCAAGCTCCACGGATAGTAGACAGGAAGATATGTATGATATTCC
AAGTGAGTGGCCCCCCCCGCTGTACCGTCATCATCTGCAGATCCTACGAT
CCAAGCTGCTGTACAAAGTGTCAGCCCTTACTCCGAAGGAAATATTCTGC
CCCCACCAACCCGCACACCCACTGCTTTTGCATCGTCTCCCGTTCTTGCC
AATGACCCCACGCGGGCAACCACGAAAATCCTCCCATTTCCGCAGGTCTT
TTGGGCTTCCGAGCGACTAGGGCGGTTAGGGGAGGACATGATCTACGTGA
AGCTGAGGGACGGGCGGGGGTGGGTTTTCGAGACCCTCCACGGCAAGAAA
GTGCTGGAGCGGGTAGCCCTGTCATCGATGGAAGACATTGAAGATGCTGG
CCCAGCTGCAAGCGGCAGTAGTAGTAGTAGTGTCTTAGAAGGAAATGATC
GATGACTTGTGTCGTCAGATCTACTACACGGATTTTTTTTATGTATTTTG
TTCTCGTCGACGTTTTACTTACGAGAAGTGCAAATATGTACAGTACATCC
TACGCGCGGAAATCTCTGTCTATCTTGGATGGCTCCGTCAGGGCAACGGC
TCTGAAGATGTTTGATGCTTGATGCTCGGAACATAGACCCAAGGGGGAAG
GTTGACGTGCCGGTGGTGTGGCAAGATAACGACAGGAGAAGAGCCGCTGC
TGGAGAATGAGTCGGGTTATAGCATCTAGGGCCCCCACTCCAGGTAACAA
CAATATGATGAGAAAGAGATTACTTTTGGCGCAGGTTCGCGAATCTTTGA
AAATGGGGCTAAGAAACGTAGCCTTACCTGAGGGACAGGATAAGAAACAT
ACCTGGTGCTCCTGGTATGAAGAACCTCGTGTTGCTGCAAGCCATGTTTG
GGTGCGCCGCGGTTGGCGTGATGCACGGAACGCATGACCAACTCTCAGCT
TGGACTACATGATCATACCGACGCC back to topCoding sequence (CDS) from alignment at Scaffold_553:956024..962798- >EsuBft904_10a-0001 ID=EsuBft904_10a-0001|Name=EsuBft904_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=711bp|location=Sequence derived from alignment at Scaffold_553:956024..962798- (Ectocarpus subulatus male Bft15b) ATGGCGGAAGGGCTGGCGACGGCATTCCAGTGCTTTCAGGACGGGATGGG GGAGAAGCTGATCTCCCTGGCCCAGCAGCAGTCGGCGCTGTTGTCGAAGC TTGAGGCCTCTCGAGAGGCCCTGCCGGTGTCTTCCACCGGACGAACGCGA GACCGTAGTGGGCGCGCCGAGTACAACGAAGACGTTGAATTCATCGCCAA GATCATGTCCCAGGCCCCATCGTACGCCCAACGTGTGCGGGCGCTCGCCC AGCAAAAGGCATCGCTAGATGCGCGGATGGTCAACCTCCAGCGAAGAAGC ACCGGGCTGAGGGAGTCTCTGCCCGTACCGATGCAGCGTCACCTAGCCGA ACGGTTAGAAGCGTCTTGCATGGCCCCGTTTCGGGAACAGACGGATATGG CGTTCGTGACGTGCTACCAAGGGGGTGTCGCCATAAGAACGGCACCGAGT CTCGATGCGCCATGCGCGGGGGATATTTTGCAATGGAACGAGGCGAGTGG AGTCTTTTGGGCTTCCGAGCGACTAGGGCGGTTAGGGGAGGACATGATCT ACGTGAAGCTGAGGGACGGGCGGGGGTGGGTTTTCGAGACCCTCCACGGC AAGAAAGTGCTGGAGCGGGTAGCCCTGTCATCGATGGAAGACATTGAAGA TGCTGGCCCAGCTGCAAGCGGCAGTAGTAGTAGTAGTGTCTTAGAAGGAA ATGATCGATGA back to top
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