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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 159749.K0QZP2 |
| ProteomeId | EsuBft89_21 |
| Protein domains | PR01217 |
| Protein domains | Coil |
| Protein domains | IPR001584 |
| Protein domains | PTHR11439 |
| Protein domains | IPR012337 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Max annot lvl | 2759|Eukaryota |
| Length | 259 |
| Evalue | 2.33e-17 |
| EggNOG OGs | COG0507@1|root,COG2801@1|root,KOG0017@2759|Eukaryota,KOG0987@2759|Eukaryota,2XG4E@2836|Bacillariophyta |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| Description | PIF1-like helicase |
| COG category | L |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0003676 |
| GO | 0015074 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft89_21a-0001 ID=EsuBft89_21a-0001|Name=EsuBft89_21a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2592bp|location=Sequence derived from alignment at Scaffold_601:395781..399037- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGACTGCTCTTTGCTAGAGAGGAAAAAGCGTCTGCAGCNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCTTGGAGATACGAGTGTGC TCACCGACGAGCAGCTCATGGATGGCTATGATGGCACCCCATATCAAGAT TATTTCCCAGTGTTTATCCCAGAGAGTGATGCTGCGAATGTGGCTGGTGT TTTGGATAGCATTGATGGGGGTGCTGATTTTGACTTGGGCGCGGCCGTGC TTGGCCCTGGTGCGTCCCCGTTTGCTCTTGGTTCGACTGAAAAGTCCGTT GACATCAACCGCTTCCACCGCTCCCTTGCCCACGCTTGCGAGCCTCTTTT GAGAGAAACTGCCCAGCAGAGAGGCATCGTGCTCACGGGCAAGCTGGAAC CGTGCACGGACTGCATGAAGGCGAAGGGCAGGCGAGGGTCGGTGCCGCGG GGGCCGGGAGCGCGGGCGTCCAAGCCACTGGGGCGTGTTCGCCTGGACCT GTGTGAACCACTGGTGCCTTCCCTGGGCGGCAACCTCTACCTGTTCGTCG CCGTGGACAGCGCCTCGCGGTGGAACAAGATGTACGGTCTCCGGCGGAAG TCCGACGCGCTGGCGGCAACGAAAAGGCTTCTGGCGGACGTGGGGCGGTA CGACCTCGGTAACGGCACCGAGTGGACCCGCGGCGACTTCCGGCGCTTCT GCGACGACAACGGCATCGACGTCGAGTTCACACCTCCTGGCGCCGGCATG GCCGCTCGCCCCAGCGCTGGCCGTGTGTTCAACGTCGACTTCGCCTCCAT CCCCGGCCTCGACGAGCGCGGTGACCGTCTTTGGATGGAATCGGCGAAGT GGGCCGCCGACGCTCTCAACCAGTCGGCGACCAAGGCCAACCCCGGGCGG CGCTCGCCGCACGAGATGTTCACCGGCGAGCAGGGGCCGTTCCGCGTGCT GCCGTTCTTCCAGCCCGGCTTCATGCGCGAGGACCGCCGCACCAAGCTCG ACGACCAGGCCACGCTCTGTTACTACCTGAACGGCGGCGACAACCACCCG AGCGGCACCGTCAAGGTCCTCAAGGCGTCCACCGGCCGCGTCGTCTACAC CAACAACGTGTCGTGGGTGACGTCGGCGCCAGCCGGTGAGGGGGGTTCCA CTGGTATCACCGCTGCGTCAACACCCCCCCCGTTTACGCCGCCGGTCGTC TCGATCAACTTTGGCCCAGCACCGACGCCTGCGACCGCAGCACTGCCGGC GCCAGCGCCCACGCCGTCACCCGCTCCCGCTCTCGCTGCCGCTTCGCCCC CTGCCGCAACGCCGCCGCCAGCGACCACGCCGCCGCCCGCTCCCACGACT TCACAGCCGCCCTCTGCCACTTCGCCGTCACCGTCGGCGACCCCCGCTCC TGGCAATCCGTCCTCTGCCTCTCCGCCGTCACCGTCGGCGACCCCCAATC CAGACCAGCCGCCGCCGCCGCCGGACCCCGCGATGCCCCCGCTTACGGCT CACGCCATGCGGCAGCTTCGCCCGGGTACAAAGGCCGAGGGTATGACAGA CCCGCGGCTGCCAAGCCGTACGAGATCGGGCACGAGGCACAGCACAGGAC TCATCTCGATGCTAGACAGGAACACTCTGGTGTCGATGCTGGAGGCTCGG AGCGCGGTGGATAAGGAGCGCAGGGAGCTGGGGGGGGCGGAGGCCGGAGA GCCGGGGGGAACGGGGGCCGGAGAGCAGGCGGGAGCACTCGCAGCAGTGG ACCCGGGGGCTGCAGGAGCGGGCTTTCCACTCGCATTTGCCACGCTCCTC GCCAACCGGGAAGACATCGACGCCACGCTGCGAGACCAGCGCCCGCCGGA GCAACGCCCTGACCTTCCTCATTGCCAGGCCAGCGACCTTCGTGTCCCCA AGAGCTACAAAGAGGCCATGGCGTCGGTGCACCGGCACCTTTGGAGCGAC TCTATGCAAAGGGAGTTTAATGGCTTGTTGGAAGCGGGGACTTTTACTCC GGCGAAGTTGACGATTTCTCAGCAGACGTTCACGGATGAGCTATCAGCAG AATATGGAGTAGTGGGAGGTAAGAGCGTTCCGATGTCTTCGGGGGTGAAG CTTTCTGATTTTGATGCAGATGAGGTGGCGACAGACTTTCCGTTTTGTGA GCTGGTAGGATCGTTGATGTGGCTGGCGACTCAGACTAGGCCAGACCTTG CGAATGCAGTAAGGGCAGTAGCTAGGTATTGCGCATCTCCGAAGCTGGTA CACTGGAATGCAGCGATGGATATTTTAGGCTATGCGAGGAGGACGGGTCA CTTTGGTATTTCGTTTCAGAGAGGTACGGTAGAGGGATTCAGCTTGCAGG GGTACGCTGATGCGAACTTTGCAAGCAAGGCAGCAGACCGTAGGTCGGTA TCAGGGGGGATCGTCACGTGTGGAGGAGGCGCTGCGTCTTAG back to topprotein sequence of EsuBft89_21a-0001 >EsuBft89_21 ID=EsuBft89_21|Name=EsuBft89_21a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=863bp
MDCSLLERKKRLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXDLGDTSVLTDEQLMDGYDGTPYQD YFPVFIPESDAANVAGVLDSIDGGADFDLGAAVLGPGASPFALGSTEKSV DINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRGSVPR GPGARASKPLGRVRLDLCEPLVPSLGGNLYLFVAVDSASRWNKMYGLRRK SDALAATKRLLADVGRYDLGNGTEWTRGDFRRFCDDNGIDVEFTPPGAGM AARPSAGRVFNVDFASIPGLDERGDRLWMESAKWAADALNQSATKANPGR RSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHP SGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSTGITAASTPPPFTPPVV SINFGPAPTPATAALPAPAPTPSPAPALAAASPPAATPPPATTPPPAPTT SQPPSATSPSPSATPAPGNPSSASPPSPSATPNPDQPPPPPDPAMPPLTA HAMRQLRPGTKAEGMTDPRLPSRTRSGTRHSTGLISMLDRNTLVSMLEAR SAVDKERRELGGAEAGEPGGTGAGEQAGALAAVDPGAAGAGFPLAFATLL ANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASVHRHLWSD SMQREFNGLLEAGTFTPAKLTISQQTFTDELSAEYGVVGGKSVPMSSGVK LSDFDADEVATDFPFCELVGSLMWLATQTRPDLANAVRAVARYCASPKLV HWNAAMDILGYARRTGHFGISFQRGTVEGFSLQGYADANFASKAADRRSV SGGIVTCGGGAAS back to topmRNA from alignment at Scaffold_601:395781..399037- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft89_21a-0001 ID=EsuBft89_21a-0001|Name=EsuBft89_21a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3257bp|location=Sequence derived from alignment at Scaffold_601:395781..399037- (Ectocarpus subulatus male Bft15b) ATGGACTGCTCTTTGCTAGAGAGGAAAAAGCGTCTGCAGCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCTTGGAGATACGAGTGTGC
TCACCGACGAGCAGCTCATGGATGGCTATGATGGCACCCCATATCAAGAT
TATTTCCCAGTGTTTATCCCAGAGAGTGATGCTGCGAATGTGGCTGGTGT
TTTGGATAGCATTGATGGGGGTGCTGATTTTGACTTGGGCGCGGCCGTGC
TTGGCCCTGGTGCGTCCCCGTTTGCTCTTGGTTCGACTGAAAAGTCCGTT
GACATCAACCGCTTCCACCGCTCCCTTGCCCACGCTTGCGAGCCTCTTTT
GAGAGAAACTGCCCAGCAGAGAGGCATCGTGCTCACGGGCAAGCTGGAAC
CGTGCACGGACTGCATGAAGGCGAAGGGCAGGCGAGGGTCGGTGCCGCGG
GGGCCGGGAGCGCGGGCGTCCAAGCCACTGGGGCGTGTTCGCCTGGACCT
GTGTGAACCACTGGTGCCTTCCCTGGGCGGCAACCTCTACCTGTTCGTCG
CCGTGGACAGCGCCTCGCGGTGGAACAAGATGTACGGTCTCCGGCGGAAG
TCCGACGCGCTGGCGGCAACGAAAAGGCTTCTGGCGGACGTGGGGCGGTA
CGACCTCGGTAACGGCACCGAGTGGACCCGCGGCGACTTCCGGCGCTTCT
GCGACGACAACGGCATCGACGTCGAGTTCACACCTCCTGGCGTTCCGTAG
TACAACGGCGTCGTCGAGAGCGCCATCTGGCGCATCATGAAGGCCGGCAT
GGCCGCTCGCCCCAGCGCTGGCCGTGTGTTCAACGTCGACTTCGCCTCCA
TCCCCGGCCTCGACGAGCGCGGTGACCGTCTTTGGATGGAATCGGCGAAG
TGGGCCGCCGACGCTCTCAACCAGTCGGCGACCAAGGCCAACCCCGGGCG
GCGCTCGCCGCACGAGATGTTCACCGGCGAGCAGGGGCCGTTCCGCGTGC
TGCCGTTCTTCCAGCCCGGCTTCATGCGCGAGGACCGCCGCACCAAGCTC
GACGACCAGGCCACGCTCTGTTACTACCTGAACGGCGGCGACAACCACCC
GAGCGGCACCGTCAAGGTCCTCAAGGCGTCCACCGGCCGCGTCGTCTACA
CCAACAACGTGTCGTGGGTGACGTCGGCGCCAGCCGGTGAGGGGGGTTCC
ACTGGTATCACCGCTGCGTCAACACCCCCCCCGTTTACGCCGCCGGTCGT
CTCGATCAACTTTGGCCCAGCACCGACGCCTGCGACCGCAGCACTGCCGG
CGCCAGCGCCCACGCCGTCACCCGCTCCCGCTCTCGCTGCCGCTTCGCCC
CCTGCCGCAACGCCGCCGCCAGCGACCACGCCGCCGCCCGCTCCCACGAC
TTCACAGCCGCCCTCTGCCACTTCGCCGTCACCGTCGGCGACCCCCGCTC
CTGGCAATCCGTCCTCTGCCTCTCCGCCGTCACCGTCGGCGACCCCCAAT
CCAGACCAGCCGCCGCCGCCGCCGGACCCCGCGATGCCCCCGCTTACGGC
TCACGCCATGCGGCAGCTTCGCCCGGGTACAAAGGCCGAGGGTATGACAG
ACCCGCGGCTGCCAAGCCGTACGAGATCGGGCACGAGGCACAGCACAGGA
CTCATCTCGATGCTAGACAGGAACACTCTGGTGTCGATGCTGGAGGCTCG
GAGCGCGGTGGATAAGGAGCGCAGGGAGCTGGGGGGGGCGGAGGCCGGAG
AGCCGGGGGGAACGGGGGCCGGAGAGCAGGCGGGAGCACTCGCAGCAGTG
GACCCGGGGGCTGCAGGAGCGGGCTTTCCACTCGCATTTGCCACGCTCCT
CGCCAACCGGGAAGACATCGACGCCACGCTGCGAGACCAGCGCCCGCCGG
AGCAACGCCCTGACCTTCCTCATTGCCAGGCCAGCGACCTTCGTGTCCCC
AAGAGCTACAAAGAGGCCATGGCGTCGGTGCACCGGCACCTTTGGAGCGA
CTCTATGCAAAGGGAGTTTAATGGCTTGTTGGAAGCGGGGACTTTTACTC
CGGCGAAGTAGCAATTAGTGGAGAACGCAATTAACGCTAAGTGGGTATTC
GATTGGAAGGCAGATGAGTTTGGATGGCCCACTATGGTAAAGTCGAGACT
TGTAGCGAGAGGTGAAATGCAGCGCGAGTACATTGACTTTGGAGAGTTGT
ACGCGCCTACCGTTTCTGTTTTGTGTGTTAGGATGTTGGCTGCTTTGGCG
TGCGAGTTGAACCTCGACTTGTGTCATTTCGATATTGAGTAAGCTTTTGT
TCGGAGTTGGAGGAAGACGTGTACATGCGTTTGCCGCAGGGATATGGAGC
TCTATCTGGAATGATTGTCAATCTAGGCAAGAGTCTGTATGGCTTGAGAC
AGACATCTAGGCAGTGGCATGCAATGCTGAAGAGGTGTTTGGTGGCGTTA
GGTTTTGAGCAGTGCATGGCCGATGCTTGTGTGTTTCGTTTGATTGAGGA
TGGATGTGTGTTGATCTTGGTAGTACATGTACATGACATTTTTGCTGTGG
GAGAGAGGGAGAGATGTGACAAGTTTGGTGCCGACCTTAACAAGTCCGTG
TCAGTGAAGAACCTGGGAGAGTTGAGATGGTATTCTGGGTGCTTTTCCGA
GAGGAACAAGGAGACCGGTAGGTTGACGATTTCTCAGCAGACGTTCACGG
ATGAGCTATCAGCAGAATATGGAGTAGTGGGAGGTAAGAGCGTTCCGATG
TCTTCGGGGGTGAAGCTTTCTGATTTTGATGCAGATGAGGTGGCGACAGA
CTTTCCGTTTTGTGAGCTGGTAGGATCGTTGATGTGGCTGGCGACTCAGA
CTAGGCCAGACCTTGCGAATGCAGTAAGGGCAGTAGCTAGGTATTGCGCA
TCTCCGAAGCTGGTACACTGGAATGCAGCGATGGATATTTTAGGCTATGC
GAGGAGGACGGGTCACTTTGGTATTTCGTTTCAGAGAGGTACGGTAGAGG
GATTCAGCTTGCAGGGGTACGCTGATGCGAACTTTGCAAGCAAGGCAGCA
GACCGTAGGTCGGTATCAGGGGGGATCGTCACGTGTGGAGGAGGCGCTGC
GTCTTAG back to topCoding sequence (CDS) from alignment at Scaffold_601:395781..399037- >EsuBft89_21a-0001 ID=EsuBft89_21a-0001|Name=EsuBft89_21a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2592bp|location=Sequence derived from alignment at Scaffold_601:395781..399037- (Ectocarpus subulatus male Bft15b) ATGGACTGCTCTTTGCTAGAGAGGAAAAAGCGTCTGCAGCNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCTTGGAGATACGAGTGTGC TCACCGACGAGCAGCTCATGGATGGCTATGATGGCACCCCATATCAAGAT TATTTCCCAGTGTTTATCCCAGAGAGTGATGCTGCGAATGTGGCTGGTGT TTTGGATAGCATTGATGGGGGTGCTGATTTTGACTTGGGCGCGGCCGTGC TTGGCCCTGGTGCGTCCCCGTTTGCTCTTGGTTCGACTGAAAAGTCCGTT GACATCAACCGCTTCCACCGCTCCCTTGCCCACGCTTGCGAGCCTCTTTT GAGAGAAACTGCCCAGCAGAGAGGCATCGTGCTCACGGGCAAGCTGGAAC CGTGCACGGACTGCATGAAGGCGAAGGGCAGGCGAGGGTCGGTGCCGCGG GGGCCGGGAGCGCGGGCGTCCAAGCCACTGGGGCGTGTTCGCCTGGACCT GTGTGAACCACTGGTGCCTTCCCTGGGCGGCAACCTCTACCTGTTCGTCG CCGTGGACAGCGCCTCGCGGTGGAACAAGATGTACGGTCTCCGGCGGAAG TCCGACGCGCTGGCGGCAACGAAAAGGCTTCTGGCGGACGTGGGGCGGTA CGACCTCGGTAACGGCACCGAGTGGACCCGCGGCGACTTCCGGCGCTTCT GCGACGACAACGGCATCGACGTCGAGTTCACACCTCCTGGCGCCGGCATG GCCGCTCGCCCCAGCGCTGGCCGTGTGTTCAACGTCGACTTCGCCTCCAT CCCCGGCCTCGACGAGCGCGGTGACCGTCTTTGGATGGAATCGGCGAAGT GGGCCGCCGACGCTCTCAACCAGTCGGCGACCAAGGCCAACCCCGGGCGG CGCTCGCCGCACGAGATGTTCACCGGCGAGCAGGGGCCGTTCCGCGTGCT GCCGTTCTTCCAGCCCGGCTTCATGCGCGAGGACCGCCGCACCAAGCTCG ACGACCAGGCCACGCTCTGTTACTACCTGAACGGCGGCGACAACCACCCG AGCGGCACCGTCAAGGTCCTCAAGGCGTCCACCGGCCGCGTCGTCTACAC CAACAACGTGTCGTGGGTGACGTCGGCGCCAGCCGGTGAGGGGGGTTCCA CTGGTATCACCGCTGCGTCAACACCCCCCCCGTTTACGCCGCCGGTCGTC TCGATCAACTTTGGCCCAGCACCGACGCCTGCGACCGCAGCACTGCCGGC GCCAGCGCCCACGCCGTCACCCGCTCCCGCTCTCGCTGCCGCTTCGCCCC CTGCCGCAACGCCGCCGCCAGCGACCACGCCGCCGCCCGCTCCCACGACT TCACAGCCGCCCTCTGCCACTTCGCCGTCACCGTCGGCGACCCCCGCTCC TGGCAATCCGTCCTCTGCCTCTCCGCCGTCACCGTCGGCGACCCCCAATC CAGACCAGCCGCCGCCGCCGCCGGACCCCGCGATGCCCCCGCTTACGGCT CACGCCATGCGGCAGCTTCGCCCGGGTACAAAGGCCGAGGGTATGACAGA CCCGCGGCTGCCAAGCCGTACGAGATCGGGCACGAGGCACAGCACAGGAC TCATCTCGATGCTAGACAGGAACACTCTGGTGTCGATGCTGGAGGCTCGG AGCGCGGTGGATAAGGAGCGCAGGGAGCTGGGGGGGGCGGAGGCCGGAGA GCCGGGGGGAACGGGGGCCGGAGAGCAGGCGGGAGCACTCGCAGCAGTGG ACCCGGGGGCTGCAGGAGCGGGCTTTCCACTCGCATTTGCCACGCTCCTC GCCAACCGGGAAGACATCGACGCCACGCTGCGAGACCAGCGCCCGCCGGA GCAACGCCCTGACCTTCCTCATTGCCAGGCCAGCGACCTTCGTGTCCCCA AGAGCTACAAAGAGGCCATGGCGTCGGTGCACCGGCACCTTTGGAGCGAC TCTATGCAAAGGGAGTTTAATGGCTTGTTGGAAGCGGGGACTTTTACTCC GGCGAAGTTGACGATTTCTCAGCAGACGTTCACGGATGAGCTATCAGCAG AATATGGAGTAGTGGGAGGTAAGAGCGTTCCGATGTCTTCGGGGGTGAAG CTTTCTGATTTTGATGCAGATGAGGTGGCGACAGACTTTCCGTTTTGTGA GCTGGTAGGATCGTTGATGTGGCTGGCGACTCAGACTAGGCCAGACCTTG CGAATGCAGTAAGGGCAGTAGCTAGGTATTGCGCATCTCCGAAGCTGGTA CACTGGAATGCAGCGATGGATATTTTAGGCTATGCGAGGAGGACGGGTCA CTTTGGTATTTCGTTTCAGAGAGGTACGGTAGAGGGATTCAGCTTGCAGG GGTACGCTGATGCGAACTTTGCAAGCAAGGCAGCAGACCGTAGGTCGGTA TCAGGGGGGATCGTCACGTGTGGAGGAGGCGCTGCGTCTTAG back to top
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