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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7G276 |
| ProteomeId | EsuBft89_19 |
| Protein domains | CYTOPLASMIC_DOMAIN |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | PTHR15371 |
| Protein domains | IPR003397 |
| Protein domains | TRANSMEMBRANE |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | mitochondrial import inner membrane translocase subunit tim23 os:saccharomyces cerevisiae (strain atcc 204508 s288c) gn:tim23 pe:1 sv:1 [Automatic annotation] |
| Nb exon | 6 |
| Max annot lvl | 2759|Eukaryota |
| Length | 1477 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.51e-139 |
| EggNOG OGs | COG5596@1|root,KOG3324@2759|Eukaryota |
| Ec32 ortholog description | Mitochondrial import inner membrane translocase subunit TIM23 homolog |
| Ec32 ortholog | Ec-16_002190.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| Preferred name | TIMM23 |
| KEGG rclass | RC00034 |
| KEGG ko | ko:K00430,ko:K17794 |
| KEGG TC | 3.A.8.1 |
| KEGG Reaction | R00602,R02596,R03919,R04007,R07443 |
| KEGG Pathway | ko00940,ko01100,ko01110,ko04212,map00940,map01100,map01110,map04212 |
| GOs | GO:0001101,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005744,GO:0005758,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009719,GO:0009725,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010604,GO:0010628,GO:0010954,GO:0014070,GO:0015031,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0017038,GO:0019222,GO:0019866,GO:0019899,GO:0022804,GO:0022857,GO:0022884,GO:0030150,GO:0030162,GO:0030943,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031323,GO:0031325,GO:0031966,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032268,GO:0032270,GO:0032592,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042221,GO:0042277,GO:0042719,GO:0042886,GO:0042887,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045039,GO:0045184,GO:0045862,GO:0046907,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051641,GO:0051649,GO:0055085,GO:0060255,GO:0061024,GO:0065002,GO:0065007,GO:0070013,GO:0070585,GO:0070613,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072655,GO:0072657,GO:0080090,GO:0090150,GO:0090151,GO:0097066,GO:0098573,GO:0098796,GO:0098798,GO:0098800,GO:1901698,GO:1901700,GO:1903317,GO:1903319,GO:1904680,GO:1905242,GO:1990351,GO:1990542 |
| EC | 1.11.1.7 |
| Description | protein import into mitochondrial matrix |
| COG category | U |
| BRITE | ko00000,ko00001,ko01000,ko02000,ko03029 |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0005739 |
| GO | 0015031 |
| GO | 0003333 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft89_19a-0001 ID=EsuBft89_19a-0001|Name=EsuBft89_19a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1477bp|location=Sequence derived from alignment at Scaffold_601:380980..386691+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GCAGCAGTCAGCAGTGCTGTCTCACAGCATCACGCGAGCCCTGCAAGGAA CCACCATGGCATCAGAACCGGCGAAGGAGAGCGGGGGGGTACAAGACCCC TACAGCGATGCCAGCGCCAAGTACGGACCGCTCAAGCTGCCGGAGCTGCA GACCGTGGACCTCAGCAAGATGTACGGCGGGGCAGCTCAAGGTAAGGAGC CAGAGTACTTGGACTACAACATCAAGGGGAGAGGCTTCTGGGAACGGATG CCTTACAACGCCGGGGCGCTTTATCTAACCGGGATCTTGGGAGGCGGAGC GGCGGGCGTTCGGGACGGGTTAGCGAAGGCGCCCAACCGGAGATCCCGAG TCCTTCTGAACAGCATCATGAACCACGCTGGCAAGAAGGGTTCCTTCTAC GGCAACACCTTTGCGGTCCTCGCAACGTACTACACCTGCGCGGAGACCTT GTTGGACCACTTTGAGGTGGACCAGATGGGACCAGTCCAGCAAGCGGGGC TGGGAGAGATCATCAACCCGTTGCTGGCGGGCGCGTCGACCGGCCTCCTG TACAAGAGCTCCGCGGGACCAAGATTGGCGTTGATGGCTTCCGTGGCGGG GCTGGGGGCTGTTGGGGTTGCCTACGCGGTGGACAAGGCGTCGGCGTCGG TGCTAGGACAGGGCATCATTTTCTAGAGATGATGGCAAAGTATTCTTGTT TGTTTAGGGAAGGACCGTGCGTCTCTTGTTCTTTTGATTTCATTCTCTGT TTCTTCCGTTTTTTCGTGGGAAGGGCATGTCATGGCGCGTTGCCTGCTTG AGGGGTACGAACTGCCCTTGTTCTGGTGTAGGCTGACCACTGCTGTGCTT AGTTTGCGAAAAGGTGTATTCCCTTCGTCATATCTTGCCCCCCTCCGTTT TGTGCCGTTCCTATTGAGTAGCCGCATTTTTTCCCTCTGCCAACAGTTGG GCATTGAGGGGTATTCGTAACCACGGTGGTGTGGACCTCAGTTGTCCAAC CAATATGCCCTTGACAGGAAAATTTCGTTCTTAAGCTTGAAGTAACACAA CAATCTGGTTTCGTTTCGCTTCGCCTTTCCTTGCCAGTCGTCTTTGTATG TGGATTCACTCTCTTTTGCGCAGCACCAAACGATCCATTTTCCGACAACC AAGCCTCAGCCCGTTCACTTTCGCTCTTACAGTGCCCCCGCCTGTAGTAG TGTGAAACTTGAATCTGGGTTGTATGATAGTGCGAGTGATACCGGTATGA TCACCGTGGCTTGAGCTGGGCTGCAATGCTGAGCAGAACCGCTACCCCTG TGCCTGACGACAGCTCGCCTAGCAACCTGACATTTTGTGACGACCCTCAC GCACCCCGTATTGTGGTAACTCCCAAGACTTTGAGCACAAGGAAAAAGTT GCACGCGAGCGCTTCTATCATTATCGACAGCGCGCGACGAATATGGGCAT TGTGTGTCTTTCGGATTAGCATCGACC back to topprotein sequence of EsuBft89_19a-0001 >EsuBft89_19 ID=EsuBft89_19|Name=EsuBft89_19a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=206bp
MASEPAKESGGVQDPYSDASAKYGPLKLPELQTVDLSKMYGGAAQGKEPE YLDYNIKGRGFWERMPYNAGALYLTGILGGGAAGVRDGLAKAPNRRSRVL LNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLG EIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAVDKASASVL GQGIIF back to topmRNA from alignment at Scaffold_601:380980..386691+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft89_19a-0001 ID=EsuBft89_19a-0001|Name=EsuBft89_19a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5712bp|location=Sequence derived from alignment at Scaffold_601:380980..386691+ (Ectocarpus subulatus male Bft15b) GCAGCAGTCAGCAGTGCTGTCTCACAGCATCACGCGAGCCCTGCAAGGAA
CCACCATGGCATCAGGTCTGCTATTCATGCGTCTTGTTTGTTCCACCTGG
CCGGCTTCCGTTTCGGCTTATCGGCTGTCTTATGTCGTGCCTCCTCGCCT
TGATTGGGAGCCTTGGGCTAGGGCCCTACAACAGTAGACTACGCGGCTGT
TCGCTGCCACAATGCAAGTGCTGCGTTGGTCGTGTGTTGAAGGCGTGCAC
TCCGTACACCACAATCTGAGCAGGGCACTGGGCAATGCTCAGCCGATTTG
GTTGCTAATGCGTATGTACATGGAGCTGCCGAACTCACTCCGAAAGGGCA
CGGACATCACAGCCAACTCGGTCGTGCGTCGTGCGTGCCCCTAGCGGTAG
TTATTACGCAGTGTTCTGTATCACCCCGCTGTTGTTGCGTCGTGGAGCAC
AACTCTTCGTATAACACCGGTATCTCTTCTGCAGTGCTCTCGGGCAGCTG
ATGTTGATCTCGATTGGGCATACCGTGTGTATCGTTAAACAGCTAGAAAA
TAGGTGATGAAGATACTGCAATTCAGTATGCTGCCGCGTTACCGTACAAG
TAGCCGTCAAGGTGGATATTGTACGACAGACACCCAAGGCCCGGTTATCT
AGCTCGGCCAGTATAAACTAAACAAGGGCATGTCTAGTGCTCATCACGGA
CACCACAAAACACTTGGTAAGGGTCTGAGTTGAGGGGCTTTTTTTTGGAG
CACACCATATGCATTACATCGCAATCCGCAATCTGACTTCCGCACCAACA
CTTTCGTGGTGCTGTACGCCCGCTCAGAATAGCTGTCTCGAGGGTGCTTG
TTTATGTGCGTTGCACGGCGAGTACCGCCTTCACTCACTGATTTGATAAG
TACGTGTCATGTCAAGTTTAAGTTTGTGTGCCCTCGCCAACAGCATTCGT
CGATTGCCCTCCATAGACGGCTCGTTGCACATGTACTCGCAGTCATCTGG
TAGATGCACTCTGCAAAACGTCCCCCTGTAACAAAATGGCGTTTCTCGTC
GGGAATAGCTTGCACAAAGCATGCAACGCCGAGCAACGAATTTTCGAGTG
AGCTGTCTCTCCCTGTTCCGTGTATCGTCGCAAGGGTCAAGACACGCCCT
CCGGAACAGTTTACCATGGTATGCCAATACCTCCCCGCTCAACCGCAGAC
CAGACCGGGCTAGGTCCCCGCTTCCTCACAGCCGGGGATTCAACTCAACC
GTTCTTATAGAACTATGTAGACATCTCCAAAGTCTTCCGGCACAGCACAA
GTCTCTCTGCCCCCCTCCGCAGCAAAGCAAAACAAACTTCCTTTCTTTCC
CTTCGTCTTTGAAATCATCCACACAAAGACACCAAGAGACTTACCCGTTA
GCGAGCAGTCGAAGTGTGTGTGTGTGGGAGGGCGTACTCTCACGTTTTGC
ATGTCTTGGCGGTTACGTCGACCATTGACCACGCGTCCTCGAGAGGACGG
AGCATCGAAGGGGACGTGTTGAAGTGAACGTCTCTTCACCAAGCTACCAA
CCACTTTCGTTTGCGCGCGAACAACGAAACCCCTGCAGAACCGGCGAAGG
AGAGCGGGGGGGTACAAGACCCCTACAGCGATGCCAGCGCCAAGTACGGA
CCGCTCAAGCTGCCGGAGCTGCAGACCGTGGACCTCAGCAAGATGTACGG
CGGGGCAGCTCAAGTGAGTTTATTCTTTTTTTTTCCACAACACAAGAAAA
TGACCTCCTCCACAGATGAAGATGAAGAGCCTGGGAAGAGATGAGAACTG
AAAGAATTCATAGCGTTTTTCTTTATAGTTTCTTTGATAGACAGTCAACA
ATATCAGTTTCCCCCAGACAAAAGAGTAAAGGATAGATGAGCGATGAATT
CATAGCTTATTGTTTGTAAATCGTGCACATACGTCGAACAGAGTGAAAGT
CAACAAAATATCGAACGGAGAGAACTTCTGGGGCTATGTTGTAAGGAAGG
ATCGGGCTACGTAGCAGGACATCTCTGCTTTGTCTACCCATGCGCCCCCC
TCCACTTGGGTAGGCACGGACCAGCTGCAGCGTGCTGGTGTCGGTGGTGT
GATGTCCTCGCACGGCATCTGCCAACACGTACAGCTTGATGCACTGCGTT
GCAGACATCCCCCAAGAGCACAAGCAACACCACTCGCACAGAGTACCAAT
GCTATCGTTGGGCAAACAAAAGAGTCAAGAGACAAAGCCGCTTCCTCCCC
TGCTCCAAAGCCCCCTCTTGCCAGGCGATGCGCACGCCCGCACGGGACGA
TGTAGCGTCTGCAGCCGGTCACGCCGGCTCGACGATGTAGCGCCCACGTA
AGCCTCAAGATTAATTTCGTTCGCCTTGGCCTCCTCGCTGCTCCCGCGTG
CCACCCCACCGCAAAACTGGACCACCTCCGAAATCACCAACCACAAAACG
TGGTCGGAAATAACGCCCGAAGGGTAAGGAGCCAGAGTACTTGGACTACA
ACATCAAGGGGAGAGGCTTCTGGGAACGGATGCCTTACAACGCCGGGGCG
CTTTATCTAACCGGTGAGTGAGGTAGAGGAGGAGGGGAGGAAGACCTGTG
CACGATGCAGACAAAAGGCGCGTAGAGTTTGTAGCATTAACCGGCGCTTT
AAATGACCGGTGAGTGAGGTAGAGGACGAGGGGAGGAACACTTGTGCACG
GATGCAGACGAAGGGCGCGCGCGCAGCTTTGCGAAGCGATGAACTAGATA
GATGAAGGGGAGGGGAGGATGACTGTGCACGACGTGGACGAAGGCGTGGA
GACCGAAGTTGCCAACTTGACCAGTCGGCAGAGTGAGAGTAGTCGCAGGG
TGGCACAAGTTGAAGGAAATCAAAGCTTTGCGGCCCTGTAAACGGACCAG
CGGGCTTAGTGGACAGGTGGACGTAATAGTGCAGAAGAGCAAGACATCCA
TGTAGTATGCACGTAGTAGAGGCCACGGGATCAAACCAGACAACACCACA
GAAGGAGCAAGCAACTACTTACCTGCTTGTTTTCTGAGTGTTCTTGCCTA
GCAAGTACCCCCCGACAGACCCCTAGTTTGTGTGCTCTGTTGGATCTACC
CCCGTTGTGTGTCTGGCTTTCAGGGATCTTGGGAGGCGGAGCGGCGGGCG
TTCGGGACGGGTTAGCGAAGGCGCCCAACCGGAGATCCCGAGTCCTTCTG
AACAGCATCATGAACCACGCTGGCAAGAAGGGTTCCTTCTACGGCAACAC
CTTTGCGGTCCTCGGTGAGTGAGTCGACAGGCAGGTTACCGTTAAGGGCA
TATGCACATGTCTGCATGTTTGGTGTCCTCGGTCGTGCGGGGACACACGT
TTTTGGCGCATCGCAGTGTTTGGTGATCGGCTACGGTGACGCACACCTCC
GGTTGTGCTTGCCCGATGGTGAAAGGGCGAGTGCGAAACACCTCGTCCGA
TTGGGTCAATTTCTTGTCTCCCCTACGCGGCCAACGATACAGTGTAGAGC
AGAGCACCGAATCGCATATGACGTTAAGCTTCGTTCCGTATGCAGGCGAC
CCGCATTGAGAAGGGCAATGGATAGAGAAAAAGGTGGAAGGAGGCGTGTG
TGTGGGGTGGGGGATAGCAACAAAACAAAAAGAGCGGCAGTGAGAAGAAA
GCACTGCCAAGGTTAGTGTGTTTTTTTTTGCACGCTGTACCGAAAGGCAG
CAGGCAGGTAGGTCTTCTCCGGTGACGTTTTGGGCGAGCAGAGAGGGTCC
AAAAAATAGGGAGTGTGAGCAGGGCGGGCGGTGCCTCGTGTGGTCATCCC
CCTCATGCCAGCAAGTGCTAAACCCGTACCATATAAGTGTGTCCACCAGT
GATCTCCCGGAACGCCTTTTTTCTCTGCCGGGTTTTCCTACAACAACGCA
TGTGGTATACCCATGGAACTTATGAATGCTTCCCAAGATTCCTGTCACCT
ACATCACATGCATGCATATTTTCCCCGCTTGGAGAAGAAGTATGAATGGT
TGAACGGATGTCACCCAGCACGAAGAGGACGTATTACGGTAGTTTTTGTT
TTGTTGTTGTTTCATGAGTTTTTTTCGGCGCGAAGGGACGGAAACACATC
CGGCTGGTTAATCCTGTTGCTTTTAAGACTTCGTAAGGAATTGGAACGTA
GTATCTAGCCCTCTTCCGTCATTCCGTGGTGTTTTTTTTTTTCGTCCAAG
TGGTTTCACTCTCGGGTCTCTCTCTCTCACAACTGCCCCCCGTTCGCCGC
TCGAAACAACGCCACGCTACCACCGCAGCAACGTACTACACCTGCGCGGA
GACCTTGTTGGACCACTTTGAGGTGGACCAGATGGGACCAGTCCAGCAAG
CGGGGCTGGGAGAGATCATCAACCCGTTGCTGGCGGGCGCGTCGACCGGC
CTCCTGTACAAGAGCTCCGGTGAGATAGAACTTGTCTCCCCGATGCTGGC
GTTACAGCAGCGGTAGTGGTGCTGACAGGAGTCTCTGCTGCGGTGGCAGG
CGTATGGACTTGGAGTTCTTGATGTCCTTGTGCTGTTATTTGCGAAAAAA
AAAAAAAACATGTTGGAAAGGTGCGTTAGCGATACTTGCGCCCTTCCTAA
GTGAGGATGGTTGCAGGGGGGGTTCCGCACAGAGACAATCCGCCGGCTTT
AGGTCCATCCTCGCAACTGGCACACTGCGGGCTACTGTTCCCATTGCGCG
TTGGTATCTGCAGCGCCGTCATGTTCTTGAGTCGCTTGTCGCCCCAATAC
CCAACATTTCGCCTGCCTCTCTCGTGTCTTTCTTCATGGCTTGTGCAGCG
GGACCAAGATTGGCGTTGATGGCTTCCGTGGCGGGGCTGGGGGCTGTTGG
GGTTGCCTACGCGGTGGACAAGGCGTCGGCGTCGGTGCTAGGACAGGGCA
TCATTTTCTAGAGATGATGGCAAAGTATTCTTGTTTGTTTAGGGAAGGAC
CGTGCGTCTCTTGTTCTTTTGATTTCATTCTCTGTTTCTTCCGTTTTTTC
GTGGGAAGGGCATGTCATGGCGCGTTGCCTGCTTGAGGGGTACGAACTGC
CCTTGTTCTGGTGTAGGCTGACCACTGCTGTGCTTAGTTTGCGAAAAGGT
GTATTCCCTTCGTCATATCTTGCCCCCCTCCGTTTTGTGCCGTTCCTATT
GAGTAGCCGCATTTTTTCCCTCTGCCAACAGTTGGGCATTGAGGGGTATT
CGTAACCACGGTGGTGTGGACCTCAGTTGTCCAACCAATATGCCCTTGAC
AGGAAAATTTCGTTCTTAAGCTTGAAGTAACACAACAATCTGGTTTCGTT
TCGCTTCGCCTTTCCTTGCCAGTCGTCTTTGTATGTGGATTCACTCTCTT
TTGCGCAGCACCAAACGATCCATTTTCCGACAACCAAGCCTCAGCCCGTT
CACTTTCGCTCTTACAGTGCCCCCGCCTGTAGTAGTGTGAAACTTGAATC
TGGGTTGTATGATAGTGCGAGTGATACCGGTATGATCACCGTGGCTTGAG
CTGGGCTGCAATGCTGAGCAGAACCGCTACCCCTGTGCCTGACGACAGCT
CGCCTAGCAACCTGACATTTTGTGACGACCCTCACGCACCCCGTATTGTG
GTAACTCCCAAGACTTTGAGCACAAGGAAAAAGTTGCACGCGAGCGCTTC
TATCATTATCGACAGCGCGCGACGAATATGGGCATTGTGTGTCTTTCGGA
TTAGCATCGACC back to topCoding sequence (CDS) from alignment at Scaffold_601:380980..386691+ >EsuBft89_19a-0001 ID=EsuBft89_19a-0001|Name=EsuBft89_19a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=621bp|location=Sequence derived from alignment at Scaffold_601:380980..386691+ (Ectocarpus subulatus male Bft15b) ATGGCATCAGAACCGGCGAAGGAGAGCGGGGGGGTACAAGACCCCTACAG CGATGCCAGCGCCAAGTACGGACCGCTCAAGCTGCCGGAGCTGCAGACCG TGGACCTCAGCAAGATGTACGGCGGGGCAGCTCAAGGTAAGGAGCCAGAG TACTTGGACTACAACATCAAGGGGAGAGGCTTCTGGGAACGGATGCCTTA CAACGCCGGGGCGCTTTATCTAACCGGGATCTTGGGAGGCGGAGCGGCGG GCGTTCGGGACGGGTTAGCGAAGGCGCCCAACCGGAGATCCCGAGTCCTT CTGAACAGCATCATGAACCACGCTGGCAAGAAGGGTTCCTTCTACGGCAA CACCTTTGCGGTCCTCGCAACGTACTACACCTGCGCGGAGACCTTGTTGG ACCACTTTGAGGTGGACCAGATGGGACCAGTCCAGCAAGCGGGGCTGGGA GAGATCATCAACCCGTTGCTGGCGGGCGCGTCGACCGGCCTCCTGTACAA GAGCTCCGCGGGACCAAGATTGGCGTTGATGGCTTCCGTGGCGGGGCTGG GGGCTGTTGGGGTTGCCTACGCGGTGGACAAGGCGTCGGCGTCGGTGCTA GGACAGGGCATCATTTTCTAG back to top
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