EsuBft895_2a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft895_2a-0001
Unique NameEsuBft895_2a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_242contigScaffold_242:563371..568168 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7G911
ProteomeIdEsuBft895_2
Protein domainsIPR011009
Protein domainsIPR001849
Protein domainsIPR000719
Protein domainsIPR002290
Protein domainsIPR011993
Protein domainsSSF50729
Protein domainsG3DSA
Protein domainsPTHR23257
Protein domainsIPR008271
Ownerapollo_admin@sb-roscoff.fr
Noteprobable serine threonine-protein kinase ddb [Automatic annotation]
Nb exon11
Max annot lvl2759|Eukaryota
Length1452
Hectar predicted targeting categoryother localisation
Evalue0.0
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota
Ec32 ortholog descriptionPhox homologous domain
Ec32 orthologEc-15_002340.1
Date last modified2016-06-14
Date creation2016-06-14
KEGG koko:K04427,ko:K20717,ko:K20718
KEGG Pathwayko04010,ko04013,ko04016,ko04064,ko04140,ko04152,ko04214,ko04310,ko04380,ko04520,ko04620,ko04621,ko04622,ko04624,ko04657,ko04660,ko04668,ko05140,ko05145,ko05162,ko05168,ko05169,ko05418,map04010,map04013,map04016,map04064,map04140,map04152,map04214,map04310,map04380,map04520,map04620,map04621,map04622,map04624,map04657,map04660,map04668,map05140,map05145,map05162,map05168,map05169,map05418
KEGG ModuleM00686,M00688,M00689
EC2.7.11.1,2.7.11.25
Descriptionprotein kinase activity
COG categoryKLT
BRITEko00000,ko00001,ko00002,ko01000,ko01001
Cross References
External references for this mRNA
DatabaseAccession
GO0005524
GO0006468
GO0044699
GO0004674
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft895_2aEsuBft895_2aEctocarpus subulatus male Bft15bgeneScaffold_242 563371..568168 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft895_2a-0001EsuBft895_2Ectocarpus subulatus male Bft15bpolypeptideScaffold_242 563371..568168 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft895_2a-0001-exonagat-exon-60863Ectocarpus subulatus male Bft15bexonScaffold_242 563371..563532 -
EsuBft895_2a-0001-exonagat-exon-60864Ectocarpus subulatus male Bft15bexonScaffold_242 563709..563840 -
EsuBft895_2a-0001-exonagat-exon-60862Ectocarpus subulatus male Bft15bexonScaffold_242 564026..564151 -
EsuBft895_2a-0001-exonagat-exon-60870Ectocarpus subulatus male Bft15bexonScaffold_242 564458..564626 -
EsuBft895_2a-0001-exonagat-exon-60869Ectocarpus subulatus male Bft15bexonScaffold_242 564939..565144 -
EsuBft895_2a-0001-exonagat-exon-60865Ectocarpus subulatus male Bft15bexonScaffold_242 565499..565559 -
EsuBft895_2a-0001-exonagat-exon-60866Ectocarpus subulatus male Bft15bexonScaffold_242 565700..565880 -
EsuBft895_2a-0001-exonagat-exon-60867Ectocarpus subulatus male Bft15bexonScaffold_242 566486..566591 -
EsuBft895_2a-0001-exonagat-exon-60868Ectocarpus subulatus male Bft15bexonScaffold_242 567168..567290 -
EsuBft895_2a-0001-exonagat-exon-60871Ectocarpus subulatus male Bft15bexonScaffold_242 567666..567813 -
EsuBft895_2a-0001-exonEsuBft895_2a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_242 568131..568168 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft895_2a-0001-cdsEsuBft895_2a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_242 563371..563532 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft895_2a-0001 ID=EsuBft895_2a-0001|Name=EsuBft895_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1452bp|location=Sequence derived from alignment at Scaffold_242:563371..568168- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGAATACTTTCCATTGGGAGGTGCGCCTGGAGACAAGCGCATACAACGT
GATTGCGAAGTCGCGTGGGCAACTGCATGCTGTGTACATCATTACGGAGT
ATGCCCAAGGTGGTGATCTACTCAAGCTCTTGCTGAGGACTGAAACGCCC
CTGGGATGGAGATTCCGGATACAAATTGCGAAAGAGGGGGCTGAGGCACT
AGAGTACTTGCATAGCCAACAACTAATCCATCGAGACATCAAAAGCAGCA
ACTTTTTGTTGGACGGAGACTGGCACTGCAAGCTGAGCGATTTCGGCATG
GCCCGTGAGGTGTCGAGCAATGGCAAGATGACCATCTGTGGCACAGACGA
GTACATGGCGCCAGAGATGCTTTTTGACGAGTCGTTCAGCTTCCCTGCTG
ACATGTTCAGCTTTGGGATGGTCCTGCTGGAGTTAATCACGCGGAAGAAG
ATCGGCGAAAACGGTTTCGCTCGCAGAACTCCCGCTAAACTCTTCGCCTT
GGAAGCAGAAGAAGTCCGACAGGAATCACCTCCGGATGCACCGGATTCTC
TGCTTAACTTAGCCGCAATGTGGGTTCCTGTGTCCGCACGAACTAGGTGC
ATGGAGTATGAGGCGGAAGAACGCCCCTCGGCAGACGAAACGAGAGCATG
GCTAGAGGAGCTACTATCAGAGCTGCCAAACGATACGTGCGCAATACCAG
AGCCGCTAGAAGTTCCGGCCATACCGGAGGGTGAAGACCGAATCGACAGC
GCTGAGACGCCGCCCGCATCCGCGATCATCGGAAAGTCGGATATTGATGG
TCTTGAACAGACTGCAAACTTTTCGGACGCCGACAAGACGCGTGTTCAGG
CCGGCCGAGACAGGGCACACTGGGCCGGAGATGCTGATGCCAACTCTGGC
CTTCCTTCGCCCCCAGCCATGGGTGGTGGAGACGACCAGTCCTTCTTCTC
GGCTTCCCAGCTGCCTTCTGTGACCGGAGACGGGGAAGCGTTTGTGCCAT
CCAAAATGGGCTACCTGCACATTAAAAATCAGGGCATCGGCTTCCGGAAC
TGGAAAAAACGCTGGTTTGTGCTGACGGGAGCAGAGCTGGTGTGCTACAT
GGATGGTGGACTTATCGAGACCGTCGGCTTGAGAGGGTGTACGATTAAAC
GGGGCAAGGCTTCGAGGTTCCAAATTATCAAAACGCATGTGGCCCGGACA
GCGGTGACTGAGGATAAGGAGGGGATCGAGGAGATGGAGCTCGCGGCTAC
TAACAGCAATTCTTTAGAAGCCTGGCTGTCAACCATCGAGAGCTGTATTG
CCTACGCGGACGAACAAGGAGCGACCAGTTCAGACAATCAAGCGTCGCCC
CTGGTCAGCATGGGAGGAAACGGCAACTCCGATAGCATCATGGACTGGTT
GCTCGATCTTCGACTGGAAGCGCTTTGGCCAAACTTCGAGGCGCACGGGT
GA
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protein sequence of EsuBft895_2a-0001

>EsuBft895_2 ID=EsuBft895_2|Name=EsuBft895_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=483bp
MNTFHWEVRLETSAYNVIAKSRGQLHAVYIITEYAQGGDLLKLLLRTETP
LGWRFRIQIAKEGAEALEYLHSQQLIHRDIKSSNFLLDGDWHCKLSDFGM
AREVSSNGKMTICGTDEYMAPEMLFDESFSFPADMFSFGMVLLELITRKK
IGENGFARRTPAKLFALEAEEVRQESPPDAPDSLLNLAAMWVPVSARTRC
MEYEAEERPSADETRAWLEELLSELPNDTCAIPEPLEVPAIPEGEDRIDS
AETPPASAIIGKSDIDGLEQTANFSDADKTRVQAGRDRAHWAGDADANSG
LPSPPAMGGGDDQSFFSASQLPSVTGDGEAFVPSKMGYLHIKNQGIGFRN
WKKRWFVLTGAELVCYMDGGLIETVGLRGCTIKRGKASRFQIIKTHVART
AVTEDKEGIEEMELAATNSNSLEAWLSTIESCIAYADEQGATSSDNQASP
LVSMGGNGNSDSIMDWLLDLRLEALWPNFEAHG
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mRNA from alignment at Scaffold_242:563371..568168-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft895_2a-0001 ID=EsuBft895_2a-0001|Name=EsuBft895_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4798bp|location=Sequence derived from alignment at Scaffold_242:563371..568168- (Ectocarpus subulatus male Bft15b)
ATGAATACTTTCCATTGGGAGGTGCGCCTGGAGACAAGGTGTTTAACGTT
GTATTAGACTTTGGAACAATCACTCACCCCGACCCCGAAAAAAGTTCACC
TACTCTTCAGTGCAGGAGAAGTTGTTGAACGTGTTGTCCTGAACGGACCA
TATGTGACAACGCTCGTGTTTGTCGTTGTCCTGGTGGTGTCTGTTGACGG
CATTCCGTGGTTTTGCTCAAACATCCAGCTCAACGTTTCACACCCAGCCC
AGAAAACTCATGTACTACCGCATGTGTACCTTGCAGGCAAGACTCACGAA
TTGGAATCGTACGCATGCCCTCCCCTCGCCAAACTGTTTGACACGTCTAC
CTTAGCGCATACAACGTGATTGCGAAGTCGCGTGGGCAACTGCATGCTGT
GTACATCATTACGGAGTATGCCCAAGGTGGTGATCTACTCAAGCTCTTGC
TGAGGACTGAAACGCCCCTGGGATGGAGATTCCGGATACAAATTGCGAAA
GAGGTATTAATGGGAGAATGGGGTATAATCTACTTTTCACTGCGGTTACG
CAGAAGCTTGGCTGTCGCAAATTTTCACTCGTTGTTTGATTGTGTAACAA
TGCAGTTCTGCACTCGGGCCTCAAAGGCAAGATGCAACGATACACGCTTC
GAATGGTTCTCGCACAGCAAAATCGCTTGAATCCCATTGTTCTGTTGGAC
CAAGTTCTGCTATTGTGTTGGTGTTGGTGGTATCGGTGAGATGCGTTGCG
GGAGCCTGCAGCAAACTTACGTGCAGGTGCTGCTTGCACCCCGCACATGG
CATGTGGGACTCCCGGGCTGCCTACTACTGCAGCAGCCATGTTCACCTTC
CGTTTACTCTTGCTTTTTTCTCGCACAGGGGGCTGAGGCACTAGAGTACT
TGCATAGCCAACAACTAATCCATCGAGACATCAAAAGCAGCAACTTTTTG
TTGGACGGAGACTGGCACTGCAAGCTGAGCGATTTCGGCATGGCCCGTGA
GGTGAGGCTCGTTTCGGCATCACATGGTGCTTGTAACCATTTACCAAGGC
AAGGACATTGGGTAGTCTCACAATTTGCGGCACTTGGTGGACACAAAACT
ACAGGTTCGGGTAGAGGCTCCACAATCAAAGCTGCTGTGGATTTAGACAT
TAACGCAACCTAGTACCTCGTATTTCGCAACGTAAGCTACCGATGTGCGG
CGCTTCAACACTTCAACTTATGATGGGTCAGTGCAGTGCGTTTATCCATG
GCCTGCTTTAGTATCCAAGGTGTCAAAAGGGTAGAGAGTCGGCTCGAGGT
TCAGCTGCAGCTATACCCACAAACCACCTTCAGGAACTCTTCGCAACAAT
CCGACGATGTTCCATAAGGGCTAGCTCGTGTTGGTTTTTGGCAGGGTGAC
AGAAACGTCTTTGCGTCCTGGAGATCTAGACTAGACGCGTATTTCCTCCG
AAAGCCTAGTTTGTCACGAAGCACCGCCCAAGGCTCAAGGCTTCTTCGGA
CAGAGCTACTGCTGTAGGTCACTGCCGCTCATGGATGGGAAAATGATGCA
TCGCCGTAACTAATACATGGTAAACAGGTGTCGAGCAATGGCAAGATGAC
CATCTGTGGCACAGACGAGTACATGGCGCCAGAGATGCTTTTTGACGAGT
CGTTCAGCTTCCCTGCTGACATGTTCAGCTTTGGTAAGGATCAGCTTCTT
CGCTGTCGTTGCCTACGTTAAGCTGCTTTTCTCGAGTTCAGGATTGGTGC
TACCACCCGGGTCCCGGTAGAATCACGCACCCATTTTATGGTTTGTGGTC
TATACCTTCGGAGGGGCGCAACACCAGTCGCTTTGACCCCGGAGAACGAT
TCACCTTTGCTCTCATTGACTCGTCCTCGCCGACTGGTTTGGCCGTCCGG
ATGATTTTTGTTTATGTTGTGGTGGTGACACTGCGGTTGTCTTGGCGACC
AAGGAACAACCCGCACTGATCGTTGGATGCCGATTGTGAGCTCTAGGGGT
GGCTTTGGGATGTGGGTCGAACTCTCATGTGTATGGCTGGTTCGTCGGAA
CCGTTTGGGCCAGCAGCGCTCCGGTTGCGACACAGTTTGGCCTGTTGCAC
TGCTGTGGCTCGAAGAACACCAACAAAGGTTGCGAACTACTCCGATTGGT
TGCAAACGAGGACGACGCCGAAGACCAGCAGTAGCTTCATGAATCAGCAA
GATGGAAAATACCGCATTAATTTCACCATGTTGACGTTCTTCCGTGCTCG
TGCATGCCGTAATCGCTGGTCGGGCATGCACTTTGAAGGGATGGTCCTGC
TGGAGTTAATCACGCGGAAGAAGATCGGCGAAAACGGTTTCGCTCGCAGA
ACTCCCGCTAAACTCTTCGCCTTGGAAGCAGAAGAAGTCCGACAGGAATC
ACCTCCGGATGCACCGGATTCTCTGCTTAACTTAGCCGCAATGTGGGTTC
CTGTGTCCGCACGAACTAGGTCTCAACGTTGACCTTGCGGGTCAAGTACA
ATGTGGGGAGCATGCCTCTTCATCTCATCTCAACAACAAAAAAAATCACC
TGGATACAGCCATCCACTTCTACTTGAGGGGCCCCGCCTATTCTCTTGTC
ATCTGGCAGGTGCATGGAGTATGAGGCGGAAGAACGCCCCTCGGCAGACG
AAACGAGAGCATGGCTAGAGGTACGGATAGCTTCCTTTGTGTTGGATTGT
CGTGGAAACGCAGGGTGTGCTCGAGGCTCTACCGGCGGTTTCGCCATCAA
CCAGCAAACTACAGCGAAGCAAACACTACATTCGAGGAATGTTTTGCATC
TTGTGTTGTACAGCAGCCTAGCCTCGCAGCGGACTGTCGGCTCTCCGAGA
GTTAGAGGACTGTCAGAAGTTGCCCAACGGTTTGAACCTCGTCCCGGCTT
ATCTGGGGTACATGTAGCAAGGGCGAAATCACTGTCTACCGTAAGCGATG
CCACATGCGAATCACACTGAGAACTGTGTTCTAGGACCACCATACCCAAG
CTTGTGCGATCGACAAAAACGCAGGAGCTACTATCAGAGCTGCCAAACGA
TACGTGCGCAATACCAGAGCCGCTAGAAGTTCCGGCCATACCGGAGGGTG
AAGACCGAATCGACAGCGCTGAGACGCCGCCCGCATCCGCGATCATCGGA
AAGTCGGATATTGATGGTCTTGAACAGACTGCAAACTTTTCGGACGCCGA
CAAGACGCGTGTTCAGGCCGGCCGAGACAGGTTAGCATGCAATGCTTTTG
CAGCTATTATTGTGCGTATGCACACCACTGGGGGGCGGACAATATCGGCA
ATTCTTTTATCAGCTGCCATCCTTGCCCACACCAGATTCAAAACCTTAAA
ACCAATGCGATGGCGTGGGTAGAGTTGCGCCTTCTTTACCCGATCAAAGG
AGATTATTTTCTGTGGCAGTGGCTTGCTGTCCAGCGATTGGTCCACGGTC
CTGTATCGAGGTTCTGTGGGAGTGAGCTTCTCGGATGCATGCTGAACTTG
TCGGTGGTGTGCATACGCTTGGCGTAATGATGACAACGACAGGGCACACT
GGGCCGGAGATGCTGATGCCAACTCTGGCCTTCCTTCGCCCCCAGCCATG
GGTGGTGGAGACGACCAGTCCTTCTTCTCGGCTTCCCAGCTGCCTTCTGT
GACCGGAGACGGGGAAGCGTTTGTGCCATCCAAAATGGGCTACCTGCACA
TTAAAAATCAGGTAGGCCTGAAACACAAAACGTGCGTACCCGCGAGTGGG
GCCCCAGATCTTGCAGAACTGGGACTACCGTCAGTGACTCTTCGGATGGT
CGTTGTATCACTTGCACACTCGCTATTACAGCGGTGCATGTGTTTACACA
AGTGAGGCGCACTATCTGTAGCCTTCGAACGTCTTCAAGTGGCCATATTT
ACGGATGCTTGTGCGTATATTATTTGCCAGCGAGAGTGTCGAGCGCGCTG
TAACTCTTGCGTGTGGCTGCCATTTCTCTTTTTTTTTATTCTGTTCTTTG
GCGCACCTCGTTTCTAGGGCATCGGCTTCCGGAACTGGAAAAAACGCTGG
TTTGTGCTGACGGGAGCAGAGCTGGTGTGCTACATGGATGGTGGACTTAT
CGAGACCGTCGGCTTGAGAGGGTGTACGATTAAACGGGGCAAGGTACGTA
CTCTTGCATGGAATCTCTTTCGCGTTTGCCACCACGGCAACAACCTGGCG
GACTCTCCAGCTCACCGAGAAGAGTCGACTCCGTTGTGGCCGGGAAATTG
CAGCGTATCTAGACTAGCCAATCAATGTATCTGCGTGCCACCCTTGTACC
CGAACGCTGTCCCATCTTTCCCGATTAGGCTTCGAGGTTCCAAATTATCA
AAACGCATGTGGCCCGGACAGCGGTGACTGAGGATAAGGAGGGGATCGAG
GAGATGGAGCTCGCGGCTACTAACAGCAATTCTTTAGAAGCCTGGCTGTC
AACCATCGAGGTCAGGTTGCTCTTGTTGAGATGCCGAAACAGAGGGGGAA
CCAACTGTGCTGCTTTAAGTGTTCACCTCATCTGTGTTTGCGCGGGTGTC
GATCGTGATTGACGGCAGAGCATGTGGTTCGGTTGTGGCTCAGTTCTTGT
CACATTTTTGTGTTACCCATGCCCCGGCCGGAATAGAGCTGTATTGCCTA
CGCGGACGAACAAGGAGCGACCAGTTCAGACAATCAAGCGTCGCCCCTGG
TCAGCATGGGAGGAAACGGCAACTCCGATAGCATCATGGACTGGTTGCTC
GATCTTCGACTGGAAGCGCTTTGGCCAAACTTCGAGGCGCACGGGTGA
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Coding sequence (CDS) from alignment at Scaffold_242:563371..568168-

>EsuBft895_2a-0001 ID=EsuBft895_2a-0001|Name=EsuBft895_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1452bp|location=Sequence derived from alignment at Scaffold_242:563371..568168- (Ectocarpus subulatus male Bft15b)
ATGAATACTTTCCATTGGGAGGTGCGCCTGGAGACAAGCGCATACAACGT
GATTGCGAAGTCGCGTGGGCAACTGCATGCTGTGTACATCATTACGGAGT
ATGCCCAAGGTGGTGATCTACTCAAGCTCTTGCTGAGGACTGAAACGCCC
CTGGGATGGAGATTCCGGATACAAATTGCGAAAGAGGGGGCTGAGGCACT
AGAGTACTTGCATAGCCAACAACTAATCCATCGAGACATCAAAAGCAGCA
ACTTTTTGTTGGACGGAGACTGGCACTGCAAGCTGAGCGATTTCGGCATG
GCCCGTGAGGTGTCGAGCAATGGCAAGATGACCATCTGTGGCACAGACGA
GTACATGGCGCCAGAGATGCTTTTTGACGAGTCGTTCAGCTTCCCTGCTG
ACATGTTCAGCTTTGGGATGGTCCTGCTGGAGTTAATCACGCGGAAGAAG
ATCGGCGAAAACGGTTTCGCTCGCAGAACTCCCGCTAAACTCTTCGCCTT
GGAAGCAGAAGAAGTCCGACAGGAATCACCTCCGGATGCACCGGATTCTC
TGCTTAACTTAGCCGCAATGTGGGTTCCTGTGTCCGCACGAACTAGGTGC
ATGGAGTATGAGGCGGAAGAACGCCCCTCGGCAGACGAAACGAGAGCATG
GCTAGAGGAGCTACTATCAGAGCTGCCAAACGATACGTGCGCAATACCAG
AGCCGCTAGAAGTTCCGGCCATACCGGAGGGTGAAGACCGAATCGACAGC
GCTGAGACGCCGCCCGCATCCGCGATCATCGGAAAGTCGGATATTGATGG
TCTTGAACAGACTGCAAACTTTTCGGACGCCGACAAGACGCGTGTTCAGG
CCGGCCGAGACAGGGCACACTGGGCCGGAGATGCTGATGCCAACTCTGGC
CTTCCTTCGCCCCCAGCCATGGGTGGTGGAGACGACCAGTCCTTCTTCTC
GGCTTCCCAGCTGCCTTCTGTGACCGGAGACGGGGAAGCGTTTGTGCCAT
CCAAAATGGGCTACCTGCACATTAAAAATCAGGGCATCGGCTTCCGGAAC
TGGAAAAAACGCTGGTTTGTGCTGACGGGAGCAGAGCTGGTGTGCTACAT
GGATGGTGGACTTATCGAGACCGTCGGCTTGAGAGGGTGTACGATTAAAC
GGGGCAAGGCTTCGAGGTTCCAAATTATCAAAACGCATGTGGCCCGGACA
GCGGTGACTGAGGATAAGGAGGGGATCGAGGAGATGGAGCTCGCGGCTAC
TAACAGCAATTCTTTAGAAGCCTGGCTGTCAACCATCGAGAGCTGTATTG
CCTACGCGGACGAACAAGGAGCGACCAGTTCAGACAATCAAGCGTCGCCC
CTGGTCAGCATGGGAGGAAACGGCAACTCCGATAGCATCATGGACTGGTT
GCTCGATCTTCGACTGGAAGCGCTTTGGCCAAACTTCGAGGCGCACGGGT
GA
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