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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft894_9 |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Protein domains | SIGNAL_PEPTIDE |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 4 |
| Length | 223 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft894_9a-0001 ID=EsuBft894_9a-0001|Name=EsuBft894_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2235bp|location=Sequence derived from alignment at Scaffold_635:274005..278148+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTCGCACTGGGAGCGGCTCCTCCTGTCTTCCTTGAGCGGGGGTGAACC AGTCAATTCCTGGCCACCAGGGTTTGGAGATGTTGCGAGACCTCTGGCAT CGCCTAGACACACCCAAAACAAGAATCGATCCCTCGTTTCCTCAGCATCG TCGTCAGTCGCAAGTACCGCCTCCAGGGTGAGGAAGCGACGACCGTCGGT GCTGGGTGGCGGCTTCTCTACGGCCGGATCATGTGCAGCATCGTCCCCAA ATAGCATCCAAGGTTCCTGGATCGAGGATGACACAGACCCGAAAGCTGGA CCCTGCTGGCAGCAGCGAGATGCCGATCGTGTGGGCCACCCTGCAACAAG GAAAGGATCAAGATCAGACGGCCACGAAGACGACGATGACGACGACGACG ACGACGAAGAGGAGGGGGAAGACCACGACAAGAAGACCGAAAGCACCGAG ATCACTGTGGTCGGGTGGGGAGATCGCAGTAGCAGGCGTAACTCGTCACG GCGTGCCTCTCGAGAAGAGACGGCAGAATGGAACGATGGCCGACCTCGAA GGTTGTCTAGCAAGGGCGTGGTGCTTGCTACAGCTACCGCTACTGCTAAC TCGCGGCAGCGACAGCACCAGCAGTATGACGGCACAGCAAACGAGACCCA CCAAGTGGAAGCTGGTGTACGCAACAAAGTCAAAACTCTCGGAGGAGCGG CAACCAGCATCGGGACTGCAATTGCGTACGTCGGCAACGGCAGCGACGAC GGGTCGGGGGTGTCGATCAGTGTGGAGCGCGCCACTGAAATCGTCACAAT CCCGACAATCACGCCTCCCCCCTTTCGCGGATGGCAACAAGCCGCCCCCA ACGCCGCCGCCGCCGCCGCAACAAGCATACACAGCGTCGCACAACCGTCT CCCACTCGTGAAACACCCGGAATCGTAACCCTCAAAGTCTCCTCCCAATC ACCGGCGTCAAAGTCGGCGGGGGAGGGGGTATCAGCCAAGTCTGCCATGA CGCCGACCAGGATGGGTCTGGCCGCATCGGCGCCGAACCTGCCAACCCTG GGCTCGATGAACAACGAAAGCGATCAACGTAGCAGCGGAAGTGTCTCTCG ATTTCCGCAGGTGTTGCCACGGCAACGGTGGCGTCAGGAAGGGCGGGGTG CTTCTGTGAGACACCGGGCAGGGCTTGCGGTCGCGGCGGGAGGAGGGCTG GAGGGATGCGGCGTCCTCCAGGACGGAAGGGGGCAAAAAGTGTTCCACAA CTTCGTGTTCCGCCGCAACAAGCGCCGCAAAGACCGAAAACCGTTACGCG ACACCCTGGCGTCTCTCGACGACAACGCAACAGACTACCAAGCGGTGGCT TCGGCGGGAGGCATAAGTGGAAGAAGGGCTGCGGGAAGGAGGTGTGGGGG CCATAGCAGCAGCAGCTGCAGCGGCAGCAGCGTGGAGATGACGGAGTCAT CGCTGCGTCGTCGGCAGAACTGGGAATCGCACCCTTCGGGAGATTGGGAC AGACCCGAGCGCCCGGGGCAGATGAACCGAACGCGCCCGCCCCCGCGGAT GCCGCGCGACGCCTTCTCCGTCGTAAGCTTCAGTTCTTCCGGCTCCGCTC GCTCTCCTTGTTCTTCGCCGCCGGCGAATGGCCAGCGGGTCGGCGGTGGC CCGTGCTCCAGCGGCGTAGGAAGGAGGCCTGTGAAGTGCCAGAGGTGCGG GTCGGGCAGGGTGAAGCTCTTTGCGACGACGGTTGCATCAGCACGCCGCT CGCCGACCCACTTGCTTCGTCAACCGCACAGTGGTGCCAGCAGCGACAGC TTTTGTGCAAGGGCCCGACATACGCGGGAGAATGCTGGCGGCGGCGGCGG TAGTCGAAACGGCGGCATTCCGACTTATTGCGATGCCGGTAGCGGTAGCA GGAGCAGCACAGATCGGCTTCGGCTAGGACCGGTGAGCAATCGCCACAAG CAGCAGAGAAACACCCATTTGGTAACGTCGATGTTGTCTCCATGGCGCAA GAACCTCGCGGGGTTGAGCGACACCGGCCGAATCGGCACGGGAGGGGAAT TACTTGGGGAGCTCCGCGGAGGCGAGAGGAACGCGGCGAACCGTCCGCGC GGGTTGATAGATGGTGCGGCGGTAGTGGGCAGCAGGAAGGCATCGGTCAG ACCACCTCCCGGCGGCGGTATCATCATCCCAGCACCGAAACCACACCTCA TGACGCGGGTCTCAAGCGGAGGATCAGGGCTCTGA back to topprotein sequence of EsuBft894_9a-0001 >EsuBft894_9 ID=EsuBft894_9|Name=EsuBft894_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=744bp
MSHWERLLLSSLSGGEPVNSWPPGFGDVARPLASPRHTQNKNRSLVSSAS SSVASTASRVRKRRPSVLGGGFSTAGSCAASSPNSIQGSWIEDDTDPKAG PCWQQRDADRVGHPATRKGSRSDGHEDDDDDDDDDEEEGEDHDKKTESTE ITVVGWGDRSSRRNSSRRASREETAEWNDGRPRRLSSKGVVLATATATAN SRQRQHQQYDGTANETHQVEAGVRNKVKTLGGAATSIGTAIAYVGNGSDD GSGVSISVERATEIVTIPTITPPPFRGWQQAAPNAAAAAATSIHSVAQPS PTRETPGIVTLKVSSQSPASKSAGEGVSAKSAMTPTRMGLAASAPNLPTL GSMNNESDQRSSGSVSRFPQVLPRQRWRQEGRGASVRHRAGLAVAAGGGL EGCGVLQDGRGQKVFHNFVFRRNKRRKDRKPLRDTLASLDDNATDYQAVA SAGGISGRRAAGRRCGGHSSSSCSGSSVEMTESSLRRRQNWESHPSGDWD RPERPGQMNRTRPPPRMPRDAFSVVSFSSSGSARSPCSSPPANGQRVGGG PCSSGVGRRPVKCQRCGSGRVKLFATTVASARRSPTHLLRQPHSGASSDS FCARARHTRENAGGGGGSRNGGIPTYCDAGSGSRSSTDRLRLGPVSNRHK QQRNTHLVTSMLSPWRKNLAGLSDTGRIGTGGELLGELRGGERNAANRPR GLIDGAAVVGSRKASVRPPPGGGIIIPAPKPHLMTRVSSGGSGL back to topmRNA from alignment at Scaffold_635:274005..278148+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft894_9a-0001 ID=EsuBft894_9a-0001|Name=EsuBft894_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4144bp|location=Sequence derived from alignment at Scaffold_635:274005..278148+ (Ectocarpus subulatus male Bft15b) ATGTCGCACTGGGAGCGGCTCCTCCTGTCTTCCTTGAGCGGGGGTGAACC
AGTCAATTCCTGGCCACCAGGGTTTGGAGATGTTGCGAGACCTCTGGCAT
CGCCTAGACACACCCAAAACAAGAATCGATCCCTCGTTTCCTCAGCATCG
TCGTCAGTCGCAAGTACCGCCTCCAGGGTGAGGAAGCGACGACCGTCGGT
GCTGGGTGGCGGCTTCTCTACGGCCGGATCATGTGCAGCATCGTCCCCAA
ATAGCATCCAAGGTTCCTGGATCGAGGATGACACAGACCCGAAAGCTGGA
CCCTGCTGGCAGCAGCGAGATGCCGATCGTGTGGGCCACCCTGCAACAAG
GAAAGGATCAAGATCAGACGGCCACGAAGACGACGATGACGACGACGACG
ACGACGAAGAGGAGGGGGAAGACCACGACAAGAAGACCGAAAGCACCGAG
ATCACTGTGGTCGGGTGGGGAGATCGCAGTAGCAGGCGTAACTCGTCACG
GCGTGCCTCTCGAGAAGAGACGGCAGAATGGAACGATGGCCGACCTCGAA
GGTTGTCTAGCAAGGGCGTGGTGCTTGCTACAGCTACCGCTACTGCTAAC
TCGCGGCAGCGACAGCACCAGCAGTATGACGGCACAGCAAACGAGACCCA
CCAAGTGGAAGCTGGTGTACGCAACAAAGTCAAAACTCTCGGAGGAGCGG
CAACCAGCATCGGGACTGCAATTGCGTACGTCGGGTGAGAGCTATACGCG
CGCAATCAATCTCGTCCTTAGCGGCGTCCAAGAGTCGATTCCCCGCAACT
GATTCCACACCTCATTCGCCGTATTCAATGAGTGAGACAGACTAACATAA
TGATGTTCAACATGTTTTGTTTGAACTGATTATGAATGATAATGATTCCA
TCGCAAAGAAGGAGTCTCCGTCGTGTCACCGCCCAATGTTGCCAAAAATT
TCGAACAATAACTCTTTGAGGGCTGTCAAGTATTGATCCCTACAACCTTT
TCGTTGAGCGATATGTACAGCAAATATGTGTTCTCGTGATGTGCATTAAT
GTTGAACCATTACGTTTCGTACCCGCACCAGGTGTGGTCTCTGCCATTCT
TACATTTCCTCTCATTCAACGTTTGCCGACTTCCTTTAGCGCCGTGAGAT
CGCGGAAAACTCGCAATATAGTCTGCCAAACGAAGGCGCAGCGTCTTGCG
TAGAATATATACTTGCGAAGAATAAGCGAAACAATTGTCTGACGTTAACC
CTAGATATGAAGCAACAACAACCCTGTTGCATCGTGAGGCAAGCTCGTGG
TGTCTTTTTCGGTAATCCCTACCCGCCGCCGCTGCTTGTGTCGCTCATTC
CGCAGCAACGGCAGCGACGACGGGTCGGGGGTGTCGATCAGTGTGGAGCG
CGCCACTGAAATCGTCACAATCCCGACAATCACGCCTCCCCCCTTTCGCG
GATGGCAACAAGCCGCCCCCAACGCCGCCGCCGCCGCCGCAACAAGCATA
CACAGCGTCGCACAACCGTCTCCCACTCGTGAAACACCCGGAATCGTAAC
CCTCAAAGTCTCCTCCCAATCACCGGCGTCAAAGTCGGCGGGGGAGGGGG
TATCAGCCAAGTCTGCCATGACGCCGACCAGGATGGGTCTGGCCGCATCG
GCGCCGAACCTGCCAACCCTGGGCTCGATGAACAACGAAAGCGATCAACG
TAGCAGCGGAAGTGTCTCTCGATTTCCGCAGGTGTTGCCACGGCAACGGT
GGCGTCAGGAAGGGCGGGGTGCTTCTGTGAGACACCGGGCAGGGCTTGCG
GTCGCGGCGGGAGGAGGGCTGGAGGGATGCGGCGTCCTCCAGGACGGAAG
GGGGCAAAAAGTGAGTGGTGATCGTGGCAGCAGAGTTTCACGAAGACTGT
ATCATCGCCGAGCCTCCGATACGGCGGAGTCTCTCAACATTTTTCCCCTC
TCTCCCGGAGGCCCTGCTCCATTCGCTGTTGACGACATGTGTACGTTCAG
GAGCTCCCGTGCTCGTTTGCCACTCTGTCAAATAGCACAAGCAGCGTGGT
CTGTGACGCGTCAATGTCAACTACCTTCATGGTGCTGCAGAAAAAAGAAA
GCAAGGTTCATTACACCACCTGCTGGTGCTGCACGAAAAAAAACAAGGTT
CGCAAAGTGCACGAGTGGGCCGCACTCTGGTTAACATACCACCAGCATGT
ATGTAGCATACCAAAACCTCGATCCCTTCCCCCCTTCCTCAGGTGTTCCA
CAACTTCGTGTTCCGCCGCAACAAGCGCCGCAAAGACCGAAAACCGTTAC
GCGACACCCTGGCGTCTCTCGACGACAACGCAACAGACTACCAAGCGGTG
GCTTCGGCGGGAGGCATAAGTGGAAGAAGGGCTGCGGGAAGGAGGTGTGG
GGGCCATAGCAGCAGCAGCTGCAGCGGCAGCAGCGTGGAGATGACGGAGT
CATCGCTGCGTCGTCGGCAGAACTGGGAATCGCACCCTTCGGGAGATTGG
GACAGGTATGCAACGCTACGACAGCGATGACTGCGACACACCGAGCATAC
ATTCGCTGAAGGTTGTTAACAAATTAGAGGCACAAGGCTGGGTTTCCCAG
TAAAAAAACGACGTGCTGACACGTGGTGCCTTGAGGATACAGCAGTGTTT
AAGAAGAGGCGACTTTCCGGTCTACATGAGACGTCAGCTGGGTTCTTCGT
AGCTCTGATCTGAATCCAGTATCTCCTCTCCCATCAAATTTTGTTCAAGG
CAGTGAGACGAGCGCCGCGGTCAACACCATACCAAAAACCGTTCAGTGAA
AAAAACAGATCAGAGCAAAATTCCACCCCACCAATCGCACGAAGGCACAA
GATCCTAGGACAACTACAATAGTTCAGAGAGACGAAAACAGCGTAGGGTT
GGGATAGCCCTATATGTCTAAAATGTTGCACAGTCCGCCGCTCCGGCTCA
AAAGCCCAGCCAAGAAACAATCAATCGCTAAGGTATAGAAGTGCATTTTT
TCTCCTTCAAGTGCCTACGGTGTCGCGTCGTCCGTGTTGCCACGTTGTTG
GTGTCCTGCGTCCACTGTACCTTATTGCATCTCCTTGTTCCTAGTTCAAA
AGCGATGGTGACAAGTTGAGCCAAATTCGCGGCACACACGAAATAACCAA
AAGCTATCAAGAGAACGAACCGGGAAACGCCCCATAGCATGGGGTGTGGG
ATGCACCTGTGGGGGATAGCCGACAAGAACAGGGGTAGTTACGCACAGTA
CCACTTCGATTGCGCCCCGGTCATGAGGGCTGCGTTTTGCCCCTCCCAAA
TGAATTGATCATCAACAACAACAACGAAAAGAAACTGCTACAACAGTCTC
AAAACATGCAACACCCCTTCAAATATAGCGTGCGCGTGTGGCCCGCAACA
ACCATCAACAGACCCGAGCGCCCGGGGCAGATGAACCGAACGCGCCCGCC
CCCGCGGATGCCGCGCGACGCCTTCTCCGTCGTAAGCTTCAGTTCTTCCG
GCTCCGCTCGCTCTCCTTGTTCTTCGCCGCCGGCGAATGGCCAGCGGGTC
GGCGGTGGCCCGTGCTCCAGCGGCGTAGGAAGGAGGCCTGTGAAGTGCCA
GAGGTGCGGGTCGGGCAGGGTGAAGCTCTTTGCGACGACGGTTGCATCAG
CACGCCGCTCGCCGACCCACTTGCTTCGTCAACCGCACAGTGGTGCCAGC
AGCGACAGCTTTTGTGCAAGGGCCCGACATACGCGGGAGAATGCTGGCGG
CGGCGGCGGTAGTCGAAACGGCGGCATTCCGACTTATTGCGATGCCGGTA
GCGGTAGCAGGAGCAGCACAGATCGGCTTCGGCTAGGACCGGTGAGCAAT
CGCCACAAGCAGCAGAGAAACACCCATTTGGTAACGTCGATGTTGTCTCC
ATGGCGCAAGAACCTCGCGGGGTTGAGCGACACCGGCCGAATCGGCACGG
GAGGGGAATTACTTGGGGAGCTCCGCGGAGGCGAGAGGAACGCGGCGAAC
CGTCCGCGCGGGTTGATAGATGGTGCGGCGGTAGTGGGCAGCAGGAAGGC
ATCGGTCAGACCACCTCCCGGCGGCGGTATCATCATCCCAGCACCGAAAC
CACACCTCATGACGCGGGTCTCAAGCGGAGGATCAGGGCTCTGA back to topCoding sequence (CDS) from alignment at Scaffold_635:274005..278148+ >EsuBft894_9a-0001 ID=EsuBft894_9a-0001|Name=EsuBft894_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2235bp|location=Sequence derived from alignment at Scaffold_635:274005..278148+ (Ectocarpus subulatus male Bft15b) ATGTCGCACTGGGAGCGGCTCCTCCTGTCTTCCTTGAGCGGGGGTGAACC AGTCAATTCCTGGCCACCAGGGTTTGGAGATGTTGCGAGACCTCTGGCAT CGCCTAGACACACCCAAAACAAGAATCGATCCCTCGTTTCCTCAGCATCG TCGTCAGTCGCAAGTACCGCCTCCAGGGTGAGGAAGCGACGACCGTCGGT GCTGGGTGGCGGCTTCTCTACGGCCGGATCATGTGCAGCATCGTCCCCAA ATAGCATCCAAGGTTCCTGGATCGAGGATGACACAGACCCGAAAGCTGGA CCCTGCTGGCAGCAGCGAGATGCCGATCGTGTGGGCCACCCTGCAACAAG GAAAGGATCAAGATCAGACGGCCACGAAGACGACGATGACGACGACGACG ACGACGAAGAGGAGGGGGAAGACCACGACAAGAAGACCGAAAGCACCGAG ATCACTGTGGTCGGGTGGGGAGATCGCAGTAGCAGGCGTAACTCGTCACG GCGTGCCTCTCGAGAAGAGACGGCAGAATGGAACGATGGCCGACCTCGAA GGTTGTCTAGCAAGGGCGTGGTGCTTGCTACAGCTACCGCTACTGCTAAC TCGCGGCAGCGACAGCACCAGCAGTATGACGGCACAGCAAACGAGACCCA CCAAGTGGAAGCTGGTGTACGCAACAAAGTCAAAACTCTCGGAGGAGCGG CAACCAGCATCGGGACTGCAATTGCGTACGTCGGCAACGGCAGCGACGAC GGGTCGGGGGTGTCGATCAGTGTGGAGCGCGCCACTGAAATCGTCACAAT CCCGACAATCACGCCTCCCCCCTTTCGCGGATGGCAACAAGCCGCCCCCA ACGCCGCCGCCGCCGCCGCAACAAGCATACACAGCGTCGCACAACCGTCT CCCACTCGTGAAACACCCGGAATCGTAACCCTCAAAGTCTCCTCCCAATC ACCGGCGTCAAAGTCGGCGGGGGAGGGGGTATCAGCCAAGTCTGCCATGA CGCCGACCAGGATGGGTCTGGCCGCATCGGCGCCGAACCTGCCAACCCTG GGCTCGATGAACAACGAAAGCGATCAACGTAGCAGCGGAAGTGTCTCTCG ATTTCCGCAGGTGTTGCCACGGCAACGGTGGCGTCAGGAAGGGCGGGGTG CTTCTGTGAGACACCGGGCAGGGCTTGCGGTCGCGGCGGGAGGAGGGCTG GAGGGATGCGGCGTCCTCCAGGACGGAAGGGGGCAAAAAGTGTTCCACAA CTTCGTGTTCCGCCGCAACAAGCGCCGCAAAGACCGAAAACCGTTACGCG ACACCCTGGCGTCTCTCGACGACAACGCAACAGACTACCAAGCGGTGGCT TCGGCGGGAGGCATAAGTGGAAGAAGGGCTGCGGGAAGGAGGTGTGGGGG CCATAGCAGCAGCAGCTGCAGCGGCAGCAGCGTGGAGATGACGGAGTCAT CGCTGCGTCGTCGGCAGAACTGGGAATCGCACCCTTCGGGAGATTGGGAC AGACCCGAGCGCCCGGGGCAGATGAACCGAACGCGCCCGCCCCCGCGGAT GCCGCGCGACGCCTTCTCCGTCGTAAGCTTCAGTTCTTCCGGCTCCGCTC GCTCTCCTTGTTCTTCGCCGCCGGCGAATGGCCAGCGGGTCGGCGGTGGC CCGTGCTCCAGCGGCGTAGGAAGGAGGCCTGTGAAGTGCCAGAGGTGCGG GTCGGGCAGGGTGAAGCTCTTTGCGACGACGGTTGCATCAGCACGCCGCT CGCCGACCCACTTGCTTCGTCAACCGCACAGTGGTGCCAGCAGCGACAGC TTTTGTGCAAGGGCCCGACATACGCGGGAGAATGCTGGCGGCGGCGGCGG TAGTCGAAACGGCGGCATTCCGACTTATTGCGATGCCGGTAGCGGTAGCA GGAGCAGCACAGATCGGCTTCGGCTAGGACCGGTGAGCAATCGCCACAAG CAGCAGAGAAACACCCATTTGGTAACGTCGATGTTGTCTCCATGGCGCAA GAACCTCGCGGGGTTGAGCGACACCGGCCGAATCGGCACGGGAGGGGAAT TACTTGGGGAGCTCCGCGGAGGCGAGAGGAACGCGGCGAACCGTCCGCGC GGGTTGATAGATGGTGCGGCGGTAGTGGGCAGCAGGAAGGCATCGGTCAG ACCACCTCCCGGCGGCGGTATCATCATCCCAGCACCGAAACCACACCTCA TGACGCGGGTCTCAAGCGGAGGATCAGGGCTCTGA back to top
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