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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FXN7 |
| ProteomeId | EsuBft894_14 |
| Protein domains | IPR026899 |
| Protein domains | PTHR12741 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | callose synthase 11 os:arabidopsis thaliana gn:cals11 pe:2 sv:1 [Automatic annotation] |
| Nb exon | 3 |
| Max annot lvl | 2880.D7FXN7|- |
| Length | 576 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.25e-73 |
| EggNOG OGs | KOG0916@1|root,KOG0916@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | 1,3-beta-D-glucan synthase activity |
| COG category | S |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0006952 |
| GO | 0051716 |
| GO | 0048856 |
| GO | 0007275 |
| GO | 0044464 |
| GO | 0016043 |
| GO | 0008152 |
| GO | 0051707 |
| GO | 0044765 |
| GO | 0052545 |
| GO | 0070727 |
| GO | 0050794 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft894_14a-0001 ID=EsuBft894_14a-0001|Name=EsuBft894_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=576bp|location=Sequence derived from alignment at Scaffold_635:231643..233258- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTTGCCAACGACCGGCTTCAGATCGCGCTGAACCTGCTGCTGTGGGG
AGAAGCGGCCAACCTCAGGCTTTGCCCGGAATTCTTGTGCTGGGCGTACC
ACAAGAGCGCCAAACGCTTGAGGGATGCCATCGGGGACAGGGCTCCGGAG
CAGTTCATCAGGCACGCAGCCTACGACAGACTCTTACAGCGGCAGTTAGG
CAGCACTAGGGAATCGGCTCCGCAGGGTATCCGGTCCTACCTCAAGGAAG
TGATCCAGCCTTGCTACCTGACGCTGGCGGAGCAGTACGAGGACCGCAAG
GCCGGGTCTCGGCCGTACCTGGTGAAGAACTACGACGACTTTAACGAGAC
GTTCTGGCAGAGGAGCTGCCTGGGCCTGGACGTGGTGGGGCTGACGCAAG
ACGCCGTGAGGAGGAAGTTTACCAAGACGTTCGTCGAGAGGCAGTCGTGG
TTGGTGCCGATGGTGAGCCAAACGGGGCACAGGGGGGGGGGGGGTGCTCG
TGTCTTGCATGCCTTCGCGGGTGGACCTCGCGTCCTCGACAGGACGGACG
GGAACTCATCTTTGCGCATGCCGTAG back to topprotein sequence of EsuBft894_14a-0001 >EsuBft894_14 ID=EsuBft894_14|Name=EsuBft894_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=191bp
MFANDRLQIALNLLLWGEAANLRLCPEFLCWAYHKSAKRLRDAIGDRAPE
QFIRHAAYDRLLQRQLGSTRESAPQGIRSYLKEVIQPCYLTLAEQYEDRK
AGSRPYLVKNYDDFNETFWQRSCLGLDVVGLTQDAVRRKFTKTFVERQSW
LVPMVSQTGHRGGGGARVLHAFAGGPRVLDRTDGNSSLRMP back to topmRNA from alignment at Scaffold_635:231643..233258- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft894_14a-0001 ID=EsuBft894_14a-0001|Name=EsuBft894_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1616bp|location=Sequence derived from alignment at Scaffold_635:231643..233258- (Ectocarpus subulatus male Bft15b)
ATGTTTGCCAACGACCGGCTTCAGATCGCGCTGAACCTGCTGCTGTGGGG
AGAAGCGGCCAACCTCAGGCTTTGCCCGGAATTCTTGTGCTGGGCGTACC
ACAAGAGCGCCAAACGCTTGAGGGATGCCATCGGGGACAGGGCTCCGGAG
CAGTTCATCAGGTACGATCTTATTGGCTAGCTGAATTCCGTCATAATGCC
TGTTCTGCCCACATGCCTCGCGCTCCACTGTATGTAGCACAGAGTTCTCC
CGTATGGTTGAGGGTTAGATTCTTTGGCGGATTTGGTGGGGTATTTGGCA
TACAGTGTGATCGCTGCGGTAGAACAGCACGTGCAAACAGAAAAATATAC
ACACAGACACACACACACGTGCGCCTTTCCATTGCTCAGCCGGTTAGCGC
GGTCGATGCTGATAACAAAAATATACATTTGCGCGCGCGTACACACACGC
CCCTGTTGCCTTTGCTGGCACTTACCTGCGATAGGTGACAACGTTGACAA
GAAATCTAGAATCGCTGTCAAGGTTAAAACGTTTGCCCCAACCTGAAAAT
GCATGGTAAACGCCCCGGCCGTCGTGTGCTGGGGTCGATGGTGCCGGCAG
GAGCGCGGCAGTGTAAAATAACGGAGATTCCTGATTGCGAACATGCCACA
CAAACCTGAGAGAACTCTTCTATGGAGCGGTAGCCCAATGGTAGAGGGGC
ATGTGCAGGCGGGCTGCTGCAGTTTGTCTGCCTCTGCAGGCACGCAGCCT
ACGACAGACTCTTACAGCGGCAGTTAGGCAGCACTAGGGAATCGGCTCCG
CAGGGTATCCGGTAACTTTCGGTCGGCGTGATCACTGGTATGGGGTGACT
TTGGAATTCAAACGTCGAGTCTGGTTCACGCGTCCGTATGCACCCTATGG
TGCTCTTTGTGACTTGACTCTTCTTACCCCTCTCTCTTAACTGCCCTGTG
CACGCCGCGCCTGCAAGGCCCTCCCTCAAGGCAGGAGGGATCCACACATA
GCAGACATCCCCCCTCCCCACTTAAGTTTTTCAATCCAACACGGGTTTTC
CCGCACAAGCGGCGGCAGGCCCTACCTCAAGGGAAGAGGCACCCGCACAT
AGCGTGCATTACCCACCCCATTTTACAATCCAACCCGGGTTTTCCCGCAC
GCGCGGCGGCAGGTCCTACGTCAGGAGAGCGGAGATCCGCTCAAGGTAGA
CGACATACTCCCCGCCCCATGAAACGTTTAAAACGCCAACTCGGTTTTCT
TTCCCGCACACGCGCGGCGGCAGGTCCTACCTCAAGGAAGTGATCCAGCC
TTGCTACCTGACGCTGGCGGAGCAGTACGAGGACCGCAAGGCCGGGTCTC
GGCCGTACCTGGTGAAGAACTACGACGACTTTAACGAGACGTTCTGGCAG
AGGAGCTGCCTGGGCCTGGACGTGGTGGGGCTGACGCAAGACGCCGTGAG
GAGGAAGTTTACCAAGACGTTCGTCGAGAGGCAGTCGTGGTTGGTGCCGA
TGGTGAGCCAAACGGGGCACAGGGGGGGGGGGGGTGCTCGTGTCTTGCAT
GCCTTCGCGGGTGGACCTCGCGTCCTCGACAGGACGGACGGGAACTCATC
TTTGCGCATGCCGTAG back to topCoding sequence (CDS) from alignment at Scaffold_635:231643..233258- >EsuBft894_14a-0001 ID=EsuBft894_14a-0001|Name=EsuBft894_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=576bp|location=Sequence derived from alignment at Scaffold_635:231643..233258- (Ectocarpus subulatus male Bft15b)
ATGTTTGCCAACGACCGGCTTCAGATCGCGCTGAACCTGCTGCTGTGGGG
AGAAGCGGCCAACCTCAGGCTTTGCCCGGAATTCTTGTGCTGGGCGTACC
ACAAGAGCGCCAAACGCTTGAGGGATGCCATCGGGGACAGGGCTCCGGAG
CAGTTCATCAGGCACGCAGCCTACGACAGACTCTTACAGCGGCAGTTAGG
CAGCACTAGGGAATCGGCTCCGCAGGGTATCCGGTCCTACCTCAAGGAAG
TGATCCAGCCTTGCTACCTGACGCTGGCGGAGCAGTACGAGGACCGCAAG
GCCGGGTCTCGGCCGTACCTGGTGAAGAACTACGACGACTTTAACGAGAC
GTTCTGGCAGAGGAGCTGCCTGGGCCTGGACGTGGTGGGGCTGACGCAAG
ACGCCGTGAGGAGGAAGTTTACCAAGACGTTCGTCGAGAGGCAGTCGTGG
TTGGTGCCGATGGTGAGCCAAACGGGGCACAGGGGGGGGGGGGGTGCTCG
TGTCTTGCATGCCTTCGCGGGTGGACCTCGCGTCCTCGACAGGACGGACG
GGAACTCATCTTTGCGCATGCCGTAG back to top
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