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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7G1Y3 |
| ProteomeId | EsuBft88_51 |
| Protein domains | PTHR24198 |
| Protein domains | IPR002110 |
| Protein domains | IPR020683 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | ankyrin-1 os:mus musculus gn:ank1 pe:1 sv:2 [Automatic annotation] |
| Nb exon | 3 |
| Max annot lvl | 2759|Eukaryota |
| Length | 3056 |
| Hectar predicted targeting category | other localisation |
| Evalue | 4.22e-154 |
| EggNOG OGs | COG0666@1|root,KOG0504@2759|Eukaryota |
| Ec32 ortholog description | EsV-1-199-related ankyrin repeat protein |
| Ec32 ortholog | Ec-07_003690.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| KEGG ko | ko:K10334 |
| Description | protein ubiquitination |
| COG category | I |
| BRITE | ko00000,ko04121 |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0008092 |
| GO | 0072659 |
| GO | 0043231 |
| GO | 0030054 |
| GO | 0048522 |
| GO | 0045184 |
| GO | 0005856 |
| GO | 0016192 |
| GO | 0045202 |
| GO | 0051050 |
| GO | 0016020 |
| GO | 0048699 |
| GO | 0048468 |
| GO | 0007154 |
| GO | 0042221 |
| GO | 1902582 |
| GO | 0043269 |
| GO | 0065008 |
| GO | 0044700 |
| GO | 0044304 |
| GO | 0044459 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft88_51a-0001 ID=EsuBft88_51a-0001|Name=EsuBft88_51a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3056bp|location=Sequence derived from alignment at Scaffold_232:604776..608881+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GCTGCTACAGCAGTACCGCAGGCGGTATGCCATCGGTAGCTCCTCCGAAG CAGAGCCCTCGCGGTAATCGGAACGAGCTGCATGATGCGGCCGACAACGA TATCATCGCGGAAATTCTAGCTCTTGTTTGCGGCGGGTCCGTTGACATCG ACCAAGGCGACCCTCACGGCTGGACCCCTCTCATGATCGCCACGGCGCAG GGCCACTCCCGCACGGTCCGGGTCCTGCTGGACGTGGGGGCAGACGCGTC GATGGTGGGCGAGAACGGCGCCACGGCCCTGATCATCGCCGCCCAGCGGG GGCACCTAGAGGCCGCAGAGATGTTGGTGGAGGCAGGCGCATATCTCGAG GCGGTGACCCCGCAAGGCTTCACCCCGCTCCACCTTGCCGCGTACGAAGG GTACCCGGAGGTGATGAGAGCGCTGATCTCCGCGGGCGCGGAGGTCAACA GCCGCTTGCCGAACGGAACGACGCCGCTGTACACGGCGGCGCTGAGGGGG AAGATGGAGTCGATCAAAGAGCTGCTTCGCGCGAACGCGGACCCGCTACT GGCAAGAACGACCCCGACCGGGAATTTCCCCCCCTTGGCCGCAGCGGCGG AGCGTGGGCGCGTGGGTGCCGTTCGCGAGCTAATTCGGCAGCTAGGGATC GAAAAATTTGGCGCGGCCGGCGGTCTAGAGGCCCTTCGTCTCGCCGCGAA AGACGGGCACGTTGACCAGCAGCAGCAGCAGCAGCAGCAACGGCAGGAGG AGAAGAGCATCGCCACTAGCGCGTACGTGAACAACGCCCGCGACGCCCTC GGCAGAACGCCCTTACTCGGCAGCATCGACATCGGGATTATCAAGCCGTG CTTTCCCAGGATCGTGCGGTTGCTCGTAGACTCAGGCGCGGACACGAAAT CGGCCGTTCGTTACACGTACAGGGATGGGTTGGTGGGATTCAGCGACACT CCTCTGTATCGCACGATACGCATCCTCCGTGACGTTGAGACCGAGGGGAA AGACGACAACGAGAAGCAGCTGGGCAGGTTGGAGGCCGTCCGCCGCTTAC TTTTGCGGGTGGAGGCAGTTCATGCGACCTCCTGGGTGTGGCCCAGCAGT GCTGCTGCCTCTGTCGCCCAAGATGCCGCTGAGGTTATAGCTGGCGCTAA GACGGAGTCGACACGGCTGAGAAGCATGATGCAAATCCTTAGACGTAGGG CTACGAGACGAGGCGTGCTATTACGGGCCCTGTCAAGATATTCGTCGTCA GAGACCGACGTTCCATGTGAACCTTCTCGCGGGATATTTTCATGAAGAAG GCGGTGGTTTCATGAGAGTTTTGCCTTCTTTGTCGTTGAACGGAGCGAGA ACCGTGGGGGGTGTAGAGGGGACGTTGTTTCTTTCCTCCAAGCAGTTGTA GCGAAATCAGCGGTAGACTACATGCGGTTTGAGCCGCGGAGAGGAACGCG CAGATGGATGGCGACGGTGGTGCTTGGGCTGCGTGGAGGAGCGGCAGCTT TTGAGCAGACTAATGCACAACCAGAACCTGGATCAGTCACCCATGGTGTA GCTTTGAAAGTGGGGGGGGGGAAGCTCCTATTCAGAAGCGGGAGCTAGAA TTGGTACCACAGGTTGGCCTCCGCCGACTGAAAATATTGTCATGCCCATG CTTTTGATGCCAAACTGGCCAAGAAGGCGCCGTCATGTTAGCCGTAGCCG CCGCCGCCGCTGCCGCCCATCACGCTGCTACTCGCCATGACACTGATGGA AGAACGGCCGAAATATTAGACTAGAAGCGCCGCGACGTCTGGGCGCATGA CGCGCGGCTCCACGCAGCTGCTTCCAAAGAGTAGATACATCACCAAAGGG TGTTCTCGCTCAAGCACATCGTGGCTCGTGGTGGCAACATTCTTTTGGAG CAAGATCAATGACAAGCTTCGTTACATCAAGGTGACAAGACCAAGCGTGC ACAAACCACTACAAGTCCACCCTTGCAATCCAAACGGTTGCGCAACCTTT TGGCGCCCCCTCTTTTCCCTGCCAGGATCTCCTGGGAACACCCCCCTGCG GTACTTGAACAAGCAGTGACCCTCGGTACCCATCTCCACACCTCTGGATA GCACACGCGACTGCTACCGTGGTGCCCGACGTGTATACAATAGTGTTCGT AAGCTTGGCTTCTTGTTCGTGCTCTGCTTGAAACTGCTGCTACAAAACCG GCGGGCGCATGAGAAGTGTGACCATGAGGGCACACTCTGACGGGGCACCG AGATTAAAACTATGAAGCACGCACAATTCGAGTGGAAGTGGTGGCCTACA TAGCCGCCAAGTTTTTGCCCTGTTTCATGTTTCTTCCCCGATATCCCGCG AGACCCCCGTCTTGTAATGGAACATCTATCCCCTAATGGAACACACCCAT TTCTGTCCCATTTCCGTCTCAAAATCGGGCCCAGCCCAGCACCACCAAAA TTCCGTCCCATCACGCAAAACCGACGAAGTTATAACACGTGGAGGGTTTC TTGCAGCACACTCCCCATGTACTTCTTCACGCCCCCAACACGCCAAAAAG GAAGCCAACCAACGAGCGAACACGGCGGTATCACCGAAGGCCAAAATGCC ACACCGCCTACTCGAACATCGAGAAGGTTAGTGTTCCCCTCCAACCCCCC CCCCCCTTGATCCCTATCATAATTTAACGTCAAAATTTTTAGTGTCCTTG ACAAGTTCGGCCTTCGTTCGTTCACAGAATAGCCGCCGGGGGGCCTAACG AGCCCCCCCGCACACACGTACACCCATTTGCAAAATCCAATACCGTCACC CTTCCCAACGGAGTCGCCTGTTCGTATTGCAACGGCTATTTCAAAGCGTT GAGCGCCTAAGCCAAAAGCACCGATACCCCCTGTCGCTAAAACAGCTTAG GCTTGGCGTATTTCTTGTGGCCCGTGGGATCGGTCGTCCGAGCTGATCGA AGAACGACGCAACCGGATGGTATCACAAACTCCCGTTTGTCCCTCCCATG TGTCCGATCCATCCGTCCGCGGCTCTCTTCTTCAACAACGACAGCAAAAA AAAAAA back to topprotein sequence of EsuBft88_51a-0001 >EsuBft88_51 ID=EsuBft88_51|Name=EsuBft88_51a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=422bp
MPSVAPPKQSPRGNRNELHDAADNDIIAEILALVCGGSVDIDQGDPHGWT PLMIATAQGHSRTVRVLLDVGADASMVGENGATALIIAAQRGHLEAAEML VEAGAYLEAVTPQGFTPLHLAAYEGYPEVMRALISAGAEVNSRLPNGTTP LYTAALRGKMESIKELLRANADPLLARTTPTGNFPPLAAAAERGRVGAVR ELIRQLGIEKFGAAGGLEALRLAAKDGHVDQQQQQQQQRQEEKSIATSAY VNNARDALGRTPLLGSIDIGIIKPCFPRIVRLLVDSGADTKSAVRYTYRD GLVGFSDTPLYRTIRILRDVETEGKDDNEKQLGRLEAVRRLLLRVEAVHA TSWVWPSSAAASVAQDAAEVIAGAKTESTRLRSMMQILRRRATRRGVLLR ALSRYSSSETDVPCEPSRGIFS back to topmRNA from alignment at Scaffold_232:604776..608881+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft88_51a-0001 ID=EsuBft88_51a-0001|Name=EsuBft88_51a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4106bp|location=Sequence derived from alignment at Scaffold_232:604776..608881+ (Ectocarpus subulatus male Bft15b) GCTGCTACAGCAGTACCGCAGGCGGTATGCCATCGGTAGCTCCTCCGAAG
CAGAGCCCTCGCGGTAATCGGAACGAGCTGCATGATGCGGCCGACAACGA
TATCATCGCGGAAATTCTAGCTCTTGTTTGCGGCGGGTCCGTTGACATCG
ACCAAGGCGACCCTCACGGCTGGACCCCTCTCATGATCGCCACGGCGCAG
GGCCACTCCCGCACGGTCCGGGTCCTGCTGGACGTGGGGGCAGACGCGTC
GATGGTGGGCGAGAACGGCGCCACGGCCCTGATCATCGCCGCCCAGCGGG
GGCACCTAGAGGCCGCAGAGATGTTGGTGGAGGCAGGCGCATATCTCGAG
GCGGTGACCCCGCAAGGCTTCACCCCGCTCCACCTTGCCGCGTACGAAGG
GTACCCGGAGGTGATGAGAGCGCTGATCTCCGCGGGCGCGGAGGTCAACA
GCCGCTTGCCGAACGGAACGACGCCGCTGTACACGGCGGCGCTGAGGGGG
AAGATGGAGTCGATCAAAGAGCTGCTTCGCGCGAACGCGGACCCGCTACT
GGCAAGAACGACCCCGACCGGGAATTTCCCCCCCTTGGCCGCAGCGGCGG
AGCGTGGGCGCGTGGGTGCCGTTCGCGAGCTAATTCGGCAGCTAGGGATC
GAAAAATTTGGCGCGGCCGGCGGTCTAGAGGCCCTTCGTCTCGCCGCGAA
AGACGGGCACGTTGACGTCATGGTTGCGTTAACCGAAGCCGGGGTGGTGG
ACACGGGCGTGGCTCTGGCCACCGCCGCCGCAATCGGCATGGAAGCATCC
GTGAAGTTTCTGCTTCAGCAGCAGCAGCAGCAGCAGCAGCAACGGCAGGA
GGAGAAGAGCATCGCCACTAGCGCGTACGTGAACAACGCCCGCGACGCCC
TCGGCAGAACGCCCTTACTCGGCAGCATCGACATCGGGATTATCAAGCCG
TGCTTTCCCAGGATCGTGCGGTTGCTCGTAGACTCAGGCGCGGACACGAA
ATCGGCCGTTCGTTACACGTACAGGGATGGGTTGGTGGGATTCAGCGACA
CTCCTCTGTATCGCACGATACGCATCCTCCGTGACGTTGAGACCGAGGGG
AAAGACGACAACGAGAAGCAGCTGGGCAGGTTGGAGGCCGTCCGCCGCTT
ACTTTTGCGGGTGGAGGCAGTTCATGCGACCTCCTGGGTGTGGCCCAGCA
GTGCTGCTGCCTCTGTCGCCCAAGATGCCGCTGAGGTTATAGCTGGCGCT
AAGACGGAGTCGACACGGCTGAGAAGCATGATGCAAATCCTTAGACGTAG
GGCTACGAGACGAGGCGTGCTATTACGGGCCCTGTCAAGGTGGGCGGTGA
TTTTTTTTATCTGGTCAATGATACTCGACGCCTTCGTTGCTGCTGTGGTC
CCGTGTACTGTTGTAGCGCGTTTTCTAGCTGCACCGTTTGATTTTGGCGT
GATTTCCTCAAGCGGTGCGGGTGCGTTGCTTCCCATGTGTTCGTTAAGTT
GGTTTTTGTGTTCTTTTGCAGCAATCACGCCCCGCCAAATACCTCAAACG
CTTCGAGAGAACTGGTGCAGGTATCTGTGCGCATGGTGCGTGCGCTCTTT
CGTCTTCTTTCTTTTTTTCTCTTCCGCTTTCTGCCATATTTTTCGCATTG
GAACCGAACGTGTGTCTCCCTCTGTCGAACTCTTCGCTTTTCCTCTCCGC
ACAACACCACACACAAACGTAGGCACGAATATACTGCGCTACTTGCTTCC
TTCTAGTTGATGGTATTAGTTAGTGCGTTGTTGTAGCAGGCAGGCCTCGA
GCGGTGTGTATATTAGACGCGCTTGCACGTGGAGTCTCTCTCACCCCCAC
TTATCTCTGTGTGTCCGTGTTTGTTTCTCCTTCTCGCGTCAAGTACTTGG
ACCTCATTCTGTCAAAAATGACGATACCCGCGAGGCAGACGGTGCGCTCT
AGTCATATGCATGCATTTTGTCTGAAAGAGAACGCAAACGGGAATGGGCT
TCTCCCGAGAAGGCGGTGACAACCAGGCACAGCTGGGAGGCTTCGTCTAC
GTTTCTGCTCAACGGTTACAGTCTCGACAGCGGTGCCCCCGATGAGTCTA
AACAACCCGCAGCATCGCCCACAGGCCGCATGCCCTGAGAACTGAGGCCG
CAGCCCTTAAGATGTCAGGCTGAAGCGAACGTGGGCCTTTTTTTAGCCCA
CAACGGGCCTGCGCTGCCTGAGGCTCCGACTGATCGCTTTCTTTCGCTCG
TTGTGTCGGGTGTTGCTGCTGTGGTTCGCTTTCGCAGATATTCGTCGTCA
GAGACCGACGTTCCATGTGAACCTTCTCGCGGGATATTTTCATGAAGAAG
GCGGTGGTTTCATGAGAGTTTTGCCTTCTTTGTCGTTGAACGGAGCGAGA
ACCGTGGGGGGTGTAGAGGGGACGTTGTTTCTTTCCTCCAAGCAGTTGTA
GCGAAATCAGCGGTAGACTACATGCGGTTTGAGCCGCGGAGAGGAACGCG
CAGATGGATGGCGACGGTGGTGCTTGGGCTGCGTGGAGGAGCGGCAGCTT
TTGAGCAGACTAATGCACAACCAGAACCTGGATCAGTCACCCATGGTGTA
GCTTTGAAAGTGGGGGGGGGGAAGCTCCTATTCAGAAGCGGGAGCTAGAA
TTGGTACCACAGGTTGGCCTCCGCCGACTGAAAATATTGTCATGCCCATG
CTTTTGATGCCAAACTGGCCAAGAAGGCGCCGTCATGTTAGCCGTAGCCG
CCGCCGCCGCTGCCGCCCATCACGCTGCTACTCGCCATGACACTGATGGA
AGAACGGCCGAAATATTAGACTAGAAGCGCCGCGACGTCTGGGCGCATGA
CGCGCGGCTCCACGCAGCTGCTTCCAAAGAGTAGATACATCACCAAAGGG
TGTTCTCGCTCAAGCACATCGTGGCTCGTGGTGGCAACATTCTTTTGGAG
CAAGATCAATGACAAGCTTCGTTACATCAAGGTGACAAGACCAAGCGTGC
ACAAACCACTACAAGTCCACCCTTGCAATCCAAACGGTTGCGCAACCTTT
TGGCGCCCCCTCTTTTCCCTGCCAGGATCTCCTGGGAACACCCCCCTGCG
GTACTTGAACAAGCAGTGACCCTCGGTACCCATCTCCACACCTCTGGATA
GCACACGCGACTGCTACCGTGGTGCCCGACGTGTATACAATAGTGTTCGT
AAGCTTGGCTTCTTGTTCGTGCTCTGCTTGAAACTGCTGCTACAAAACCG
GCGGGCGCATGAGAAGTGTGACCATGAGGGCACACTCTGACGGGGCACCG
AGATTAAAACTATGAAGCACGCACAATTCGAGTGGAAGTGGTGGCCTACA
TAGCCGCCAAGTTTTTGCCCTGTTTCATGTTTCTTCCCCGATATCCCGCG
AGACCCCCGTCTTGTAATGGAACATCTATCCCCTAATGGAACACACCCAT
TTCTGTCCCATTTCCGTCTCAAAATCGGGCCCAGCCCAGCACCACCAAAA
TTCCGTCCCATCACGCAAAACCGACGAAGTTATAACACGTGGAGGGTTTC
TTGCAGCACACTCCCCATGTACTTCTTCACGCCCCCAACACGCCAAAAAG
GAAGCCAACCAACGAGCGAACACGGCGGTATCACCGAAGGCCAAAATGCC
ACACCGCCTACTCGAACATCGAGAAGGTTAGTGTTCCCCTCCAACCCCCC
CCCCCCTTGATCCCTATCATAATTTAACGTCAAAATTTTTAGTGTCCTTG
ACAAGTTCGGCCTTCGTTCGTTCACAGAATAGCCGCCGGGGGGCCTAACG
AGCCCCCCCGCACACACGTACACCCATTTGCAAAATCCAATACCGTCACC
CTTCCCAACGGAGTCGCCTGTTCGTATTGCAACGGCTATTTCAAAGCGTT
GAGCGCCTAAGCCAAAAGCACCGATACCCCCTGTCGCTAAAACAGCTTAG
GCTTGGCGTATTTCTTGTGGCCCGTGGGATCGGTCGTCCGAGCTGATCGA
AGAACGACGCAACCGGATGGTATCACAAACTCCCGTTTGTCCCTCCCATG
TGTCCGATCCATCCGTCCGCGGCTCTCTTCTTCAACAACGACAGCAAAAA
AAAAAA back to topCoding sequence (CDS) from alignment at Scaffold_232:604776..608881+ >EsuBft88_51a-0001 ID=EsuBft88_51a-0001|Name=EsuBft88_51a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1269bp|location=Sequence derived from alignment at Scaffold_232:604776..608881+ (Ectocarpus subulatus male Bft15b) ATGCCATCGGTAGCTCCTCCGAAGCAGAGCCCTCGCGGTAATCGGAACGA GCTGCATGATGCGGCCGACAACGATATCATCGCGGAAATTCTAGCTCTTG TTTGCGGCGGGTCCGTTGACATCGACCAAGGCGACCCTCACGGCTGGACC CCTCTCATGATCGCCACGGCGCAGGGCCACTCCCGCACGGTCCGGGTCCT GCTGGACGTGGGGGCAGACGCGTCGATGGTGGGCGAGAACGGCGCCACGG CCCTGATCATCGCCGCCCAGCGGGGGCACCTAGAGGCCGCAGAGATGTTG GTGGAGGCAGGCGCATATCTCGAGGCGGTGACCCCGCAAGGCTTCACCCC GCTCCACCTTGCCGCGTACGAAGGGTACCCGGAGGTGATGAGAGCGCTGA TCTCCGCGGGCGCGGAGGTCAACAGCCGCTTGCCGAACGGAACGACGCCG CTGTACACGGCGGCGCTGAGGGGGAAGATGGAGTCGATCAAAGAGCTGCT TCGCGCGAACGCGGACCCGCTACTGGCAAGAACGACCCCGACCGGGAATT TCCCCCCCTTGGCCGCAGCGGCGGAGCGTGGGCGCGTGGGTGCCGTTCGC GAGCTAATTCGGCAGCTAGGGATCGAAAAATTTGGCGCGGCCGGCGGTCT AGAGGCCCTTCGTCTCGCCGCGAAAGACGGGCACGTTGACCAGCAGCAGC AGCAGCAGCAGCAACGGCAGGAGGAGAAGAGCATCGCCACTAGCGCGTAC GTGAACAACGCCCGCGACGCCCTCGGCAGAACGCCCTTACTCGGCAGCAT CGACATCGGGATTATCAAGCCGTGCTTTCCCAGGATCGTGCGGTTGCTCG TAGACTCAGGCGCGGACACGAAATCGGCCGTTCGTTACACGTACAGGGAT GGGTTGGTGGGATTCAGCGACACTCCTCTGTATCGCACGATACGCATCCT CCGTGACGTTGAGACCGAGGGGAAAGACGACAACGAGAAGCAGCTGGGCA GGTTGGAGGCCGTCCGCCGCTTACTTTTGCGGGTGGAGGCAGTTCATGCG ACCTCCTGGGTGTGGCCCAGCAGTGCTGCTGCCTCTGTCGCCCAAGATGC CGCTGAGGTTATAGCTGGCGCTAAGACGGAGTCGACACGGCTGAGAAGCA TGATGCAAATCCTTAGACGTAGGGCTACGAGACGAGGCGTGCTATTACGG GCCCTGTCAAGATATTCGTCGTCAGAGACCGACGTTCCATGTGAACCTTC TCGCGGGATATTTTCATGA back to top
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