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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft88_47 |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | SignalP-noTM |
| Protein domains | Coil |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Protein domains | SIGNAL_PEPTIDE |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 7 |
| Length | 203 |
| Hectar predicted targeting category | signal peptide |
| Ec32 ortholog description | Tim17/22-like protein |
| Ec32 ortholog | Ec-07_003650.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft88_47a-0001 ID=EsuBft88_47a-0001|Name=EsuBft88_47a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2030bp|location=Sequence derived from alignment at Scaffold_232:634222..639835- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCTGAGAGCGCTCATCCTACTGCTTGCCGCTGAGCGTCTTCTCCTAGA TATGGGTTGGTTCGGCCTCGGGCGACGTAAACCTGCTAAAGAAGGCGCTC CGTCTTCCCCCACCCTATCGACCGATGGAATCAACATTTCAACAGGCGGT GGTGCCCAAGCCGCATCGGAGTCGACAGCACGTTCTAGCACGCCCATGCC GGAGCCGGTTGGAGGACCGAAGACCACGTTGAATGCTCCAGCGGCGGCGA TGAGGGCTGATGCCTGTGATATCGCTTCACCAGTAGAAAAGCAGCAGGAG CAACAGCAAGGGGAGGGGGTCGCGGATTCGAGTCCAGGGTACGCCCACAG GCTCAAGGCCGCCTTCCTAGACACCGTGGTAACGGCCCAGAGAGCGCCCG AGACGCTGGAGGAGGCCATGGCCGTGATCAAGGGAGAAAGAGCCGTCAAG CCGGACTACGTGAGAGCGGTCGGCACCGTGTCGGCGGCTTTCGCCGGAGG CTGCGCCCACGGCTGGTGGCACGGCGCGGCGCTTGCCGCCAAGTACCCTC CGCACCAACGGAGTATCGTCAGAGTGCGCGCGGGGGCTCGGAGGGGGCTA AGGCTCGCGACCTTCGCGCTGATATATGAGGGCTCATCTGCTGTTACGGA GGCCCTGCGACGGAAGAAGGACTTCGTCGGGGGCACGGTGGGAGGCGCGC TGGCAGGCATGGCATACGGTTTTTCATACGGTATGGCCGCCGCGCGAAGC CATCTGTTCTACGGCTTCTGGCTCGGAGGCGTGTTCAGTCTGTTCAGGAA TCACGTGGCGTCCTTGAGGGAGCAGGCCCGGCTGGCGGAGGAAGACAAGC GATTGGCACAGGAGGAGAGGGATGCGATCGGGGCGACGGCGCTGAGAAGG TCCATAGCAGAGATAGATGCCCAGCTCAGGACATGGCCCACTGCAGCCGC TGACAGCGAAGACGAAACGGACACGACGGAACTCGCTTCGTCACGAAGAA CACCGTAATAGTGGCAGGCAGATCGGATCGGACACTGAGACAGGCCTGGA TGGGGTTGCAGCCGAGGGTCTGGTGGAAAGGCTGCCTCTGTCCCATGCTG CGGTGCTGTTCGCTGAAGTACAGACCGGAGTGTGGCAGGGATGCCTCGGG CGTAGAGGTCGTTCGCTGCTCGCGATGAGATGAATACATGAGCAGCCGGG GCTGTACCAGAAGAAGCTCTGGCATGACATACGTCGAAGAGATGGGTTCG ATCTTTGGATGTGGCTAGAGACACCGCGGATAGTTTATTTGGCCGTCGAT TCTTCGCCAGAGCACACAACTTGGCTTTCATTGATCGTTTTCGGCATACC CAGTCCAACGATTTCATTCAACTGCAGGTACTCCTTTAAACTTTTCGGGC ACGCTTTTAGCGCCGCGGTCGTTACACTGCTGTCATCTGTGTCAAAGCTA AATGACCGCAACCCTATGGAGGGAATAGGGAAGCGAAAGGGGGTTCTCGG TGCTTGTACACCTTACTGACATCATGTCGTGCCCACGGGCTGTTTGTGCA CATAGGAAGCGTAGAGTCGACTCTTGTTGACTCAACTAACGTAAGCAATG AGCGAGAGACGGTGGTGATGGGCGAGGCAAGCAACAAAAGAACTATACTC GTTGCAGGTGCTCGTCACTCGGCAACTCGTTTGTCTGTGCATATACCCAT TTCATTCACGTAGCCCCCGGAGGCTTGTAGACCAGCACTCTGCCGAGAGC AGCCGAGCACTAGCACCACCGCTGTGCGGGAGGAGTCCTCGGCCCCAGCT GTGCTTCTATACAGCAGTACAGACAAGCATCGAGGTAGAAGTTTGTAACG CGTGCACGGAGCGGAGAGAGGGTGCGAAGGGGGCCGTCGGTTGGGGAACA TTCGGGTTTCCACAAGGTTCGGGAAGCATTATATATGGAATCTTCAACAG ACATTCACCTATGCTGTAGAAACGAGTAGGGCGGCCGAGGCAGTTGTGGC GAACTACTAATGTTTTTTTTTGTCTCCCAT back to topprotein sequence of EsuBft88_47a-0001 >EsuBft88_47 ID=EsuBft88_47|Name=EsuBft88_47a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=335bp
MLRALILLLAAERLLLDMGWFGLGRRKPAKEGAPSSPTLSTDGINISTGG GAQAASESTARSSTPMPEPVGGPKTTLNAPAAAMRADACDIASPVEKQQE QQQGEGVADSSPGYAHRLKAAFLDTVVTAQRAPETLEEAMAVIKGERAVK PDYVRAVGTVSAAFAGGCAHGWWHGAALAAKYPPHQRSIVRVRAGARRGL RLATFALIYEGSSAVTEALRRKKDFVGGTVGGALAGMAYGFSYGMAAARS HLFYGFWLGGVFSLFRNHVASLREQARLAEEDKRLAQEERDAIGATALRR SIAEIDAQLRTWPTAAADSEDETDTTELASSRRTP back to topmRNA from alignment at Scaffold_232:634222..639835- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft88_47a-0001 ID=EsuBft88_47a-0001|Name=EsuBft88_47a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5614bp|location=Sequence derived from alignment at Scaffold_232:634222..639835- (Ectocarpus subulatus male Bft15b) ATGCTGAGAGCGCTCATCCTACTGCTTGCCGCTGAGCGTCTTCTCCTAGA
TATGGGTTGGTTCGGCCTCGGGCGACGTAAACCTGCTAAAGAAGGCGCTC
CGTCTTCCCCCACCCTATCGACCGATGGAATCAACATTTCAAGTGAGTCC
CGTCTGAATTTCTCCTTGATCGTCCTCTCCTTGTGGCCGCCGATACATAA
TGGCATGATGGCATGAGTCGTTCCGGCCCTAGTGTACTGACAGCATCTTT
TCGTAGGTATGTATGCAATGTCTTTTGCATATGTGCAGGACACATTGGTG
TGTGTGTCTCTCTCTAAAGCACCACGGATGCTTCACGAATGGTTGTTTTT
CTATTCCTGCCGAATATGTAAATCTTAAGGTTTGAGCTTGGGTTCAGCAG
TGTTTTTTTTTTCTCCCATCATGGACTCTGTCGTCTGCCCCACTGGCCCC
TATCCTCCACTTCCACCAGCTAGACGACCCAACCGGGGTCACATTGGAGG
GGGGGGTTGGACCCCCTCCTGCGGTTCCTGCTTGAGGTATTTTTATCGCG
AGAAGGGTACAGCAATCCCTTCCCCCCCTGACACGCGGGGCTCTTCTGAA
CGCTATTCTTGCGGTACGTTTTGTTTCCATCTGTGACGCGATGTCTCCCA
TGCCTGCACATCTGCACCTTTTGCGCCGTTTGAACCGCTACACAGCAGGC
GGTGGTGCCCAAGCCGCATCGGAGTCGACAGCACGTTCTAGCACGCCCAT
GCCGGAGCCGGTTGGAGGACCGAAGGTTAGTCCGAGGGAGGTGTACATAG
TCTTATACATGCATGAGTCGTTCATGGGAGTAATCGAGAAAGAAGTCGGG
GGCTCACGCGACTGCTGTCCGCGAATAAATCGAGCCCCATGAAGCACAAC
CTTGCCCCCGAGGTATCTAGTTCCCCTGCTTGGCGTATTACCGGCGCTGC
TCAGCCGACCTGAGGTCTGACTTCGAGCAACATGCTCACCTCCTCCGAAT
GCCCGACGTTCATCAGACCACGTTGAATGCTCCAGCGGCGGCGATGAGGG
CTGATGCCTGTGATATCGCTTCACCAGTAGAAAAGCAGCAGGAGCAACAG
CAAGGGGAGGGGGTCGCGGATTCGAGTCCAGGGTACGCCCACAGGCTCAA
GGCCGCCTTCCTAGACACCGTGGTAACGGCCCAGAGAGCGCCCGAGACGC
TGGAGGAGGCCATGGCCGTGATCAAGGGAGAAAGAGCCGTCAAGCCGGAC
TACGTGAGAGCGGTCGGCACCGTGTCGGCGGTGCGTTCGAGCTGAGGCGA
AGCCGCTGCTGTAGCTATCGAAGCCACACACGCTGTCCGGCCGTTGCTGC
ATGCATCGTCCATCATCCGACCGGATAATTTTTTTTTCCAGTAACTTGGC
AGCGGGGAGTTTTGGCGGAGCAAGGAGACAATCGAGACTGCCATGCACTC
CATGTCCCAGACGTTCCTTGACCTATAGCTCCGTTTGCCGAACTGGCCTA
TGCACCCAGCCAGGGTACTACTGTAGACGCGGCTGCCATGGCCGTTTCTT
TCGTTGTGGGCTCGGCCTCCGTTCAACCTCCCCGGACTCTCGCAAGCATA
CAGCAGCAGCGCATGTCGGGGGCGACTTGTGCTACGTTTCCGATGTCTCA
GATTTCCTGACGAAGTAGCCCCTTGAATCTTGAATGTGCTCCAGCTTCCG
CATGCTTGTCATCGGGGAGAGCGTGAACCCCCACCCACAGCATAGCGCGC
ACAGCCTCGTTTTCCGGACTGTTGATAGAATCCATGTGTGCACCAACTCT
TTGGGCAACCTTTGTACGGAAGCATCTGTCAACTCAGAAACCTAGAGCTC
CGCTTACAGCCGCTAATCCTATTCCGGCTGGTGTTTTCGCCAGAGCAGCG
TGCCTGCCTCAGCCCGCGCTGATTTTAGAACGCTTTGTCTGTGTCGTAGT
ATATCTATCAACACGTTCGGATTCGCACGACCCGTTTCGATTACATGTTT
TTGTTCCTTGCGTACTTGCAGGCTTTCGCCGGAGGCTGCGCCCACGGCTG
GTGGCACGGCGCGGCGCTTGCCGCCAAGTACCCTCCGCACCAACGGAGTA
TCGTCAGAGTGCGCGCGGGGGCTCGGAGGGGGCTAAGGCTCGCGACCTTC
GCGCTGATATATGAGGGGTGAGCGCCCGCCCCGCGACGACCATATGCGAC
CGAACACTGATGAAAGCCTCCATCTAATGTGTGTAGCTTCCCACATCGAG
AAACCTCCACGAAGGTGGGCGCACAGACACGTCCCGCTCACGATATTTCG
GACTCTGGATGCATGCACCACTTTGCCCCACCTTGGCAGCGGCCGGTTGA
AGGCACCGCTCCCTGAAGGTTTGCGCTCAGGGTTTTCTCGTTCACGACCA
TGGTGGTGCAACGGGTGCCGTCCTCGGCCATGGCAACCCTTGGCGAAAGC
GGCCTTTCGGTAGAGACACACCGCGAAAGGGCACGGGTTGCACGTCCACG
GAAAACTGGTGTTCCGTTAAAACGCGAGGAAACCCACGCCCCGTAGACTG
ACCTTTGAAAAGCTCGATTGCTCTACAGCTAAGGTGGAACGACAAGCGAC
CGATATGTACGTTGAAGGCAAGCTATCTCGACGAGATTAGTTCTAGCGCA
GCCGTTTCTTGGGATTGATAAGCCTCTTGGTTTTGGAGTAATCGAGCTGT
AGAAGTTTGGCTCCGGGGGGAGTGCGATCGCTCGCGCTTTCCCGGTACAT
ATCCAGGTCCATAGTCTCCACCCTTTCTTGTCTTCATCGTAAACAGCAGC
TATCGCTACATGACCAAATGAATCAACACACCAATCACCCTGGTTCTTTC
AGCAGCAGCAGCAAGTAGTAGAGGTTTAAACTCTTCAATGTCCGCGATTT
CCATTCGTTTGCGCTACTACACCATGCCCGCTCCCGTGGTTTTGGACGAG
TTTCAGCTCATCTGCTGTTACGGAGGCCCTGCGACGGAAGAAGGACTTCG
TCGGGGGCACGGTGGGAGGCGCGCTGGCAGGCATGGCATACGGTTTTTCA
TGTGAGTGATTGTGTGTGACTTGTTTGCTTTGTTCCTCTTTTTCTGTTGC
ACAGAATGTAGCTCCTCCCACGGGTGGACCTCGCTCTGTGATATATGCCC
GATACGCGGTATACCGTAGGTGACAATAGGTTATGAAAACCCTCTGGACC
GATTTTCAGTCTTTCCCGACGAACAGGATGAATATCTGCTAACGATGCGC
TTGCGGTGAAGCTCCGATGAGGAGGCTCGGACGCTGCAATTGTTCGGCAC
CGCCACTCTTTCTGCGGTGGAGACATCGAGCTTTGATAGCCGGTCTAAGG
AGGTGTACTTTGTCACGTCACTTTACCACGGTGCAACACGTACACCAGCA
CGGACTATCGATTCTCTATTGCATTGGTAGTCTCTTCACATTCGGCCATC
TTGTCCTCTCTGACGGATATCTGTCCAGCCCTGGCAACGGGTGCATTCCG
ATGTTGGTAGTCGTTATGTACCGCACTTTTCCCAGGCACCGTTTGGCCCC
GGCTGCCGCGTCAAACGCAAACCGAAAGGAGTAGACTAGCACCAAAATAT
GTTCTCCGTATTTGGAACGAACACAGTAGTAGTTTTGGGCCTAATCTTGA
GCGCGTTTCTCCCGTTTTTTTTTCATGTTCATGCACATGGTGCTGCTGTT
CTTGCTTGTTGTCCTGCAGACGGTATGGCCGCCGCGCGAAGCCATCTGTT
CTACGGCTTCTGGCTCGGAGGCGTGTTCAGTCTGTTCAGGAATCACGTGG
CGTCCTTGAGGGAGCAGGCCCGGCTGGCGGAGGAAGACAAGCGATTGGCA
CAGGTGGAGAGACGAAGAAGACCCGCCTCTGTTTTTTTTTGTTTTTTTGT
CGCGTTCAGCAACAGACCGCACAAGCATGTCGCTTCACCGGGGTGTATTT
GCGGTGGGGAAATTAATCATGCGACAGTTGTTGCTGTTGCTGTTGTTGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGACTTTGCTGAAAATTTCGGCGGGATTGTGT
GGCTAGGGTTGCGACCAAACGGCACGTGCACCGAGCCAAGTGGGCTGTGG
GTCGATTGGCCTGCGATTGCTTGCCTCATCGCATCATTTTGCAACATCCG
TAAGGCTGAAGCACTGCCTGCCGTAGGCTCGCTCCGGTATCCACCCCTTT
CATGATTTCGCTCCCCCACCCCTGAACTGTATGATGGTCTGTTGTTTGCC
CACCCCCCTCGTCAGGAGGAAACATCGTTAGGATAGACAGACTAGGGAAG
ACATTTTTGAGCCACCTTTGGCAAAGTAGAAAGGAACGATTGGCCATCGG
TGATCGGTCCTGTGGGAACAANNNNCCCCCCCCCCCCCTCGTCAGGAGGA
GAGGGATGCGATCGGGGCGACGGCGCTGAGAAGGTCCATAGCAGAGATAG
ATGCCCAGCTCAGGACATGGCCCACTGCAGCCGCTGACAGCGAAGACGAA
ACGGACACGACGGAACTCGCTTCGTCACGAAGAACACCGTAATAGTGGCA
GGCAGATCGGATCGGACACTGAGACAGGCCTGGATGGGGTTGCAGCCGAG
GGTCTGGTGGAAAGGCTGCCTCTGTCCCATGCTGCGGTGCTGTTCGCTGA
AGTACAGACCGGAGTGTGGCAGGGATGCCTCGGGCGTAGAGGTCGTTCGC
TGCTCGCGATGAGATGAATACATGAGCAGCCGGGGCTGTACCAGAAGAAG
CTCTGGCATGACATACGTCGAAGAGATGGGTTCGATCTTTGGATGTGGCT
AGAGACACCGCGGATAGTTTATTTGGCCGTCGATTCTTCGCCAGAGCACA
CAACTTGGCTTTCATTGATCGTTTTCGGCATACCCAGTCCAACGATTTCA
TTCAACTGCAGGTACTCCTTTAAACTTTTCGGGCACGCTTTTAGCGCCGC
GGTCGTTACACTGCTGTCATCTGTGTCAAAGCTAAATGACCGCAACCCTA
TGGAGGGAATAGGGAAGCGAAAGGGGGTTCTCGGTGCTTGTACACCTTAC
TGACATCATGTCGTGCCCACGGGCTGTTTGTGCACATAGGAAGCGTAGAG
TCGACTCTTGTTGACTCAACTAACGTAAGCAATGAGCGAGAGACGGTGGT
GATGGGCGAGGCAAGCAACAAAAGAACTATACTCGTTGCAGGTGCTCGTC
ACTCGGCAACTCGTTTGTCTGTGCATATACCCATTTCATTCACGTAGCCC
CCGGAGGCTTGTAGACCAGCACTCTGCCGAGAGCAGCCGAGCACTAGCAC
CACCGCTGTGCGGGAGGAGTCCTCGGCCCCAGCTGTGCTTCTATACAGCA
GTACAGACAAGCATCGAGGTAGAAGTTTGTAACGCGTGCACGGAGCGGAG
AGAGGGTGCGAAGGGGGCCGTCGGTTGGGGAACATTCGGGTTTCCACAAG
GTTCGGGAAGCATTATATATGGAATCTTCAACAGACATTCACCTATGCTG
TAGAAACGAGTAGGGCGGCCGAGGCAGTTGTGGCGAACTACTAATGTTTT
TTTTTGTCTCCCAT back to topCoding sequence (CDS) from alignment at Scaffold_232:634222..639835- >EsuBft88_47a-0001 ID=EsuBft88_47a-0001|Name=EsuBft88_47a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1008bp|location=Sequence derived from alignment at Scaffold_232:634222..639835- (Ectocarpus subulatus male Bft15b) ATGCTGAGAGCGCTCATCCTACTGCTTGCCGCTGAGCGTCTTCTCCTAGA TATGGGTTGGTTCGGCCTCGGGCGACGTAAACCTGCTAAAGAAGGCGCTC CGTCTTCCCCCACCCTATCGACCGATGGAATCAACATTTCAACAGGCGGT GGTGCCCAAGCCGCATCGGAGTCGACAGCACGTTCTAGCACGCCCATGCC GGAGCCGGTTGGAGGACCGAAGACCACGTTGAATGCTCCAGCGGCGGCGA TGAGGGCTGATGCCTGTGATATCGCTTCACCAGTAGAAAAGCAGCAGGAG CAACAGCAAGGGGAGGGGGTCGCGGATTCGAGTCCAGGGTACGCCCACAG GCTCAAGGCCGCCTTCCTAGACACCGTGGTAACGGCCCAGAGAGCGCCCG AGACGCTGGAGGAGGCCATGGCCGTGATCAAGGGAGAAAGAGCCGTCAAG CCGGACTACGTGAGAGCGGTCGGCACCGTGTCGGCGGCTTTCGCCGGAGG CTGCGCCCACGGCTGGTGGCACGGCGCGGCGCTTGCCGCCAAGTACCCTC CGCACCAACGGAGTATCGTCAGAGTGCGCGCGGGGGCTCGGAGGGGGCTA AGGCTCGCGACCTTCGCGCTGATATATGAGGGCTCATCTGCTGTTACGGA GGCCCTGCGACGGAAGAAGGACTTCGTCGGGGGCACGGTGGGAGGCGCGC TGGCAGGCATGGCATACGGTTTTTCATACGGTATGGCCGCCGCGCGAAGC CATCTGTTCTACGGCTTCTGGCTCGGAGGCGTGTTCAGTCTGTTCAGGAA TCACGTGGCGTCCTTGAGGGAGCAGGCCCGGCTGGCGGAGGAAGACAAGC GATTGGCACAGGAGGAGAGGGATGCGATCGGGGCGACGGCGCTGAGAAGG TCCATAGCAGAGATAGATGCCCAGCTCAGGACATGGCCCACTGCAGCCGC TGACAGCGAAGACGAAACGGACACGACGGAACTCGCTTCGTCACGAAGAA CACCGTAA back to top
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