EsuBft889_8a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft889_8a-0001
Unique NameEsuBft889_8a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_323contigScaffold_323:34726..39384 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7G503
ProteomeIdEsuBft889_8
Protein domainsPTHR12149
Protein domainsIPR016477
Protein domainsIPR011009
Ownerapollo_admin@sb-roscoff.fr
Notefructosamine-3-kinase os:mus musculus gn:fn3k pe:2 sv:1 [Automatic annotation]
Nb exon5
Max annot lvl2759|Eukaryota
Length1915
Hectar predicted targeting categoryother localisation
Evalue5.56e-78
EggNOG OGsCOG3001@1|root,KOG3021@2759|Eukaryota
Ec32 ortholog descriptionProtein kinase-like domain
Ec32 orthologEc-04_002400.1
Date last modified2016-06-13
Date creation2016-06-13
KEGG rclassRC00002,RC00078
KEGG koko:K00921,ko:K15523
KEGG ReactionR05802,R10951
KEGG Pathwayko00562,ko04070,ko04145,ko04810,map00562,map04070,map04145,map04810
EC2.7.1.150,2.7.1.172
Descriptionprotein-ribulosamine 3-kinase activity
COG categoryG
BRITEko00000,ko00001,ko01000,ko04131
Cross References
External references for this mRNA
DatabaseAccession
GO0005975
EC2.7.1
GO0052673
GO0005794
GO0016301
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft889_8aEsuBft889_8aEctocarpus subulatus male Bft15bgeneScaffold_323 34726..39384 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft889_8a-0001EsuBft889_8Ectocarpus subulatus male Bft15bpolypeptideScaffold_323 35639..39180 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft889_8a-0001-exonagat-exon-23564Ectocarpus subulatus male Bft15bexonScaffold_323 34726..35829 -
EsuBft889_8a-0001-exonEsuBft889_8a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_323 36418..36577 -
EsuBft889_8a-0001-exonagat-exon-23562Ectocarpus subulatus male Bft15bexonScaffold_323 37924..38091 -
EsuBft889_8a-0001-exonagat-exon-23565Ectocarpus subulatus male Bft15bexonScaffold_323 38567..38646 -
EsuBft889_8a-0001-exonagat-exon-23563Ectocarpus subulatus male Bft15bexonScaffold_323 38982..39384 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft889_8a-0001-exonagat-three_prime_utr-22727Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_323 34726..35638 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft889_8a-0001-cdsEsuBft889_8a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_323 35639..35829 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft889_8a-0001-exonagat-five_prime_utr-14708Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_323 39181..39384 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft889_8a-0001 ID=EsuBft889_8a-0001|Name=EsuBft889_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1915bp|location=Sequence derived from alignment at Scaffold_323:34726..39384- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
TGTATATAGAGTCTTTAAGAAGCGCGTCTTGCGTTTCTTGCGACCGATAG
GCCTATCGTTGAAGCCTCCCAAGCAAGGCCTACCGTTCCTCACCGTATTC
GCAGCAAGAACACGTGATTTCTGTACAGAACCCTCCGCAGGTTGAGAGCC
GCGGTTTTCATCGCAGGTGCAAGGGTGTGCTTGTAATTTCCCTGGTTGTA
CTCGATGGTTTGTGACAAGAAGATGGGTGCTCGTACTGTCTCGGGGCAGA
GACTTACCCGAACCGTGAGAGTCCCAAGAGTGATCGCGCTGGCTACCCTC
CCGGAGAGGCGAGGAGCGGCGTTGATCCTGGAGTACGTCAAGATGGAAAC
CATGTCCACTGAGGAGCAACGCAAGGTGGGCTGTGGTGAAGAACTAGCCA
TGAGTGCGCCGCAGGAACTCGGAGCCCTGTCGCCGTACGGAGCGCGTTCT
TGCCAGCTCGTCGATGAACCTTGTCATCCCGTGAAACACCTGGTGCGGCG
AGTCGCTGCAGATCAACGACTGGGAAGACGACTGGTGCAACTTCTTATCC
AAGCACAGGCTGGGCCGACAGGCAGAGATGATCCTGGAGAAGCACGGGGA
TCACGAGGTAGCCACCAAGGTGTAGAAACTCAGGGTGAACCTTCGCGAGA
GGATTTGGAAATCACGCCTAGCCTCCTGCACGGAAATCTGTGGAGTCGAA
ACTGGGGTGTGGACTACAGCGGCAAGCCCGTCATCTACGACCCCGCAGTC
TACTTTGGCCACTACGAGATGGAGATGAGCATGTTGACAATGTTCGGATC
ACCTTGCAAAGGCTTCTTCGTCAGGTACCACGACCTCTTGCCGAGGGAGG
AACCGGGTTACCAGGACAGGATAATGCTGTATCAGCTGTACCACTACCTC
AACCTGTACCTGCAGCATGGGAGAGGCTTCCGGAGCCCGTGCATGGCGTT
GGTCAAGACTCTTCTGGCCCCCAGCATTCCTAGCGGCAGCAGCAGCGGGT
GAACTGAGCGAGTATTTACGTAGCACATTTGTATCAGGAGACAGATCGCT
CCTCCGCTATCGGCTTGTGAAGGGAAGTATGATTATCCTTGAACGATTCG
GCTCAGTCGGAAGGCGTTTATTTTGCCGGTGTCGTAACGTTGGTTGTGGA
TATTATAGTATTGACGTCGGTGGTGATGGTGGAGGCGATGCTGGGGCGGG
AGGGCAAGCGAAAATGTAAAATTTCGGTGTTGAGATGCGTCGCACCCGTA
TGTGCGCGTCGCGGCCATCGTGTTTTATGGTCGTGAGCAGTGTTTTGTGT
TGCTTTCTTGTTGTGTGATGTGCTAGAAGCTTATAATTATCTTCTCCTTG
TGTAGGCTTGAGGTGGTTGGCGTACCTTGAAGTGTGATTGTGTTTGTGCG
CCACACTACTACTTGGATACGTTTGCATAGCGCACCCCGTTATTTGCAAG
GAGCCAGCGTGTACTTGTAATGTTTGATGCTGGGCGAGTGCTGCCAGGTG
CATATTGGTGAGACTGGCTCTGGGGATATTGCCGGAAACGTTTCATGACC
GAATGGGTCATGTGGAAGAGGGTCAGCTCGTTTTTTATAAAGGTTTTCGT
TAGCTACTCCCAACCAAGTTTTTTCTGGTCCTGAACAACTGCTGTTATGA
CTCACTCGACGCTAACGACGACAACGCCTGTTTCGTGAAGTATCCTGGGG
TGAGACGGGAAGGAAAGTGGGCGTGATCTGTGGCTACGAAAGAAAAGAGA
AGCGCATGGTAGGTACTGTAATTGCTGTCGCTGTCTACTCACATGTTCCC
GGTGTTGATCGCTCCCCCTTCCGCGGGTAAAACTCCAGAAATACGCCGCG
ACAGGCAGACTGCCCGGAATGCGACTTGTTTGGAGTCACGGCCGTGCGGT
GCGGTGTTGTACATG
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protein sequence of EsuBft889_8a-0001

>EsuBft889_8 ID=EsuBft889_8|Name=EsuBft889_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=265bp
MVCDKKMGARTVSGQRLTRTVRVPRVIALATLPERRGAALILEYVKMETM
STEEQRKVGCGEELAMSAPQELGALSPYGARSCQLVDEPCHPVKHLVRRV
AADQRLGRRLVQLLIQAQAGPTGRDDPGEARGSRGSHQGVETQGEPSRED
LEITPSLLHGNLWSRNWGVDYSGKPVIYDPAVYFGHYEMEMSMLTMFGSP
CKGFFVRYHDLLPREEPGYQDRIMLYQLYHYLNLYLQHGRGFRSPCMALV
KTLLAPSIPSGSSSG
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mRNA from alignment at Scaffold_323:34726..39384-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft889_8a-0001 ID=EsuBft889_8a-0001|Name=EsuBft889_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4659bp|location=Sequence derived from alignment at Scaffold_323:34726..39384- (Ectocarpus subulatus male Bft15b)
TGTATATAGAGTCTTTAAGAAGCGCGTCTTGCGTTTCTTGCGACCGATAG
GCCTATCGTTGAAGCCTCCCAAGCAAGGCCTACCGTTCCTCACCGTATTC
GCAGCAAGAACACGTGATTTCTGTACAGAACCCTCCGCAGGTTGAGAGCC
GCGGTTTTCATCGCAGGTGCAAGGGTGTGCTTGTAATTTCCCTGGTTGTA
CTCGATGGTTTGTGACAAGAAGATGGGTGCTCGTACTGTCTCGGGGCAGA
GACTTACCCGAACCGTGAGAGTCCCAAGAGTGATCGCGCTGGCTACCCTC
CCGGAGAGGCGAGGAGCGGCGTTGATCCTGGAGTACGTCAAGATGGAAAC
CATGTCCACTGAGGAGCAACGCAAGGTGGGCTGTGGTGAAGAACTAGCCA
TGAGTATTGTGTTGTATTGTTGTTGTTGTTGTTGTTGTTGTTTCTTTTGT
TCTGATTGTCGTGTAGGCAGCCGGTGAGGTCAGTCCCCGCCAGGTGTACT
AGTGTTGGTGTTGCCACTTTCCCCTTCGGCCTCGCACCGTTCATCCAGGA
TGTAGTAGTCGGTTGGAATGAGGCTTGGGCACTTCCTCCCATGTGTTGTA
CAGCAAATCGTACGCGTCCATTTTCGCTCCCTCACCACCCCATGAACTTG
TCCCTGGCGCGTTGCTGACGCTCCAGTTTGGTGAGAAGTTTGCTCGGATG
CACAGGGCGTTTATCTGCCCCAAGTTCGGTTACTTCAGGTGCGCCGCAGG
AACTCGGAGCCCTGTCGCCGTACGGAGCGCGTTCTTGCCAGCTCGTCGAT
GAACCTTGTCATCCCGTGGTCAGCTCCAAATACGTCTCTTGTTGGGTAAA
GATATCCCGGGGATACATTAAAACGTAAACGTGCAGATACCCCTATACTT
TGTAACGAGCGTGCGACGCGAATGTGCCCCAGATATCGGTGCTCACCTCA
GGGGCACGTGATACGCAACATTGCTGTCATGAGAGCCACCGCCCACCCGA
AGGAATTCCCACTAATGCAAGCCCCAAAATGGCATTTTAGCTCCAGTTCC
AACGTATTGTTTGCAATGTTCCTCGTTCCGTCAATCAAGACTTCGAATTA
TAGCCACGTAGCACAAATATGTATGTCCCCAAGTTCATCTCCTCCCGCGG
GTGACCATCTTGCGGCGTTTCGCGGCTTTGTGAAAACCCCGCCAGAATCT
TGCGTTCTCTGCTCCGCCTTGTGATGTTATTGAGGCATGCTGCCCGATAT
TAAGCGTACCCCCCTTCGCTGCTGTATGGCAACGCCCGCGCAGAAACACC
TGGTGCGGCGAGTCGCTGCAGATCAACGACTGGGAAGACGACTGGTGCAA
CTTCTTATCCAAGCACAGGCTGGGCCGACAGGCAGAGATGATCCTGGAGA
AGCACGGGGATCACGAGGTAGCCACCAAGGTGTAGAAACTCAGGGTGAAC
CTTCGCGAGAGGTAAGTGGGTACACGGGGGAAAGGTTTTTGCTAAAGCAC
GCGAGCTGTCGTCGGGTTTCTCATGGGGGCTTGGTAGGCCGTTTTTGTGG
GCGTTGTTGATCGTGGGTTAACTCAGTAGCGTTTCAAGCACTGGTGCTAT
GGGGTGGTTTTCGCTGTGAGATATTTCGTGTCGTCGTACACATCAACCTC
CTCCTCCTCGGAAAACGAGATATTCGCCCTGATCCTCGACTGTTTGCACG
TACCGTAGTAATGCGTATGATGGCGTGCCGCCGTGGTGCAATCAAATTCT
TTCTTGACGTTTTACCGCACGTACAACTCCGATGCATGCGAAACCCCCGA
TAACGGCGCGGAAGTGCAATCATATCGCTTCGTTCTAGCTTTTTCTAACG
CACTACTGGTGCGATAACTCCGACGTCGCTAGTTGGGATTACCGTCCGCG
CATCAGTAGATACACATCCTTCTTTCGTGCTGTAGGACGTTCTGATGCGT
TATCTCTACACATGTAGGCGGTGGCTGATACCTAGCGGCTTGGTCATGAC
AGCGAATGGTGCAGAAGTGGGGTTGAAAGCGCATTTGGTTGTGGCGTGCG
CCGAGGGCGAAAAACGATGTGGCCTCCTATTGGGAGTGGTTTTAGCTTAT
CTTCGAGCTTGCACTTCGTTTATGTGTTTTCCGCTGTCGATTTTGTCTTC
TTTGTCTGCGAGTACGGCGGCAAACGTACTGTACGAGTGCCTTCTGGAAT
GGGTAGGTTGTAGATTTGCCGGAAGCGTGTTTGTGTGCCTGGTTGAGGGT
ATACCAGTGCACCAAGTACTGTACAAATTCACCGGAAACAAGTCGACTCT
CATGACGAAGCACGAACCATGACGGCCCAATAGAGCGGCACCATGATGAT
ACTGTATATTGCAAGTAAAGTCCTCCAATTGGTCCCCATTATCAGCGAAA
AACGACGCGGAATCAATCGTGGCAACTCGCAATCAATTCTTCCGCCCGAA
GCAGGATTTCGCCGGTGTTATCGGACCGAAAACACCGACAACTGCGCGAA
ATTTGAAAAATATCATATTGTTCTTGCTTTTCCATCACTTCCCGGTGCGA
TGACTCCGATAGGTGTATCCCCCTCGATGGGTACCATCCAACGCATTTTT
ACGGCGTTTTCGTACGGGTGGTCAAACCTCAGACACCAGGGCATGCACGT
CCAAGGTATTCAGGTTTTGCGTGCCCTTTTCCTTTCACCATCCCCGTTTC
ATGTGCGGTATTTCTTGTGCCCTCCACACGACTATTTATCCCACAAGCTT
CCCCGTTCCGCCCTATTCCCACTCTTTGTCGCGAACAACGCGCGAATGTT
CTTCAAGGATTTGGAAATCACGCCTAGCCTCCTGCACGGAAATCTGTGGA
GTCGAAACTGGGGTGTGGACTACAGCGGCAAGCCCGTCATCTACGACCCC
GCAGTCTACTTTGGCCACTACGAGATGGAGATGAGCATGTTGACAATGTT
CGGATCACCTTGCAAAGGTGAAGGACAGGTTGCGGTCGCACTTACACCTA
CGCGCAACGTGTGACATCACGCTTTCCATTCCATTTCCCGACAAAGTTTG
CCTACACAAAACGATTTTGAGAACTCACGGCGTGCGGTTAGGTGCACACT
GCGAGGAAAATACTTGGAAAAATCAAACAGCAAGAGATTTCGATCCCAAA
AAAAGTTGTTTCACCTGAGAGAGGCAACATATGTACCCACATCCCTACAT
CGCCGTACGTTCGGTCGCATACCGATAAAAATACGCCTTCTGTACTCTCC
GACATCCATATGTCGGCCCTGGGTTTCGACGTCGCACCATTTGTTTGCCG
TTTCTACCGTCGAACACCGCTCATCGTAGAGTTGAGTGGGCGTGTTGATC
CATTTTTTCTAGCCCTGGAATCCGAGACGTACGCAAGTTTAGGTCTATGA
ATAGCGGGCGACCGTATTCCTGGTACCCTGGCGTGGGGTTCGGGGCAGGG
AACGGTGTTGGCCTCTCTTCGAAGGACTGGAGGTTCATCGGTCAAACAGG
TGAAGGACAGAAAACGTGACGTAGCCCTCCCGCTCCTTACGCGTCGTTCG
ACCAGGCTTCTTCGTCAGGTACCACGACCTCTTGCCGAGGGAGGAACCGG
GTTACCAGGACAGGATAATGCTGTATCAGCTGTACCACTACCTCAACCTG
TACCTGCAGCATGGGAGAGGCTTCCGGAGCCCGTGCATGGCGTTGGTCAA
GACTCTTCTGGCCCCCAGCATTCCTAGCGGCAGCAGCAGCGGGTGAACTG
AGCGAGTATTTACGTAGCACATTTGTATCAGGAGACAGATCGCTCCTCCG
CTATCGGCTTGTGAAGGGAAGTATGATTATCCTTGAACGATTCGGCTCAG
TCGGAAGGCGTTTATTTTGCCGGTGTCGTAACGTTGGTTGTGGATATTAT
AGTATTGACGTCGGTGGTGATGGTGGAGGCGATGCTGGGGCGGGAGGGCA
AGCGAAAATGTAAAATTTCGGTGTTGAGATGCGTCGCACCCGTATGTGCG
CGTCGCGGCCATCGTGTTTTATGGTCGTGAGCAGTGTTTTGTGTTGCTTT
CTTGTTGTGTGATGTGCTAGAAGCTTATAATTATCTTCTCCTTGTGTAGG
CTTGAGGTGGTTGGCGTACCTTGAAGTGTGATTGTGTTTGTGCGCCACAC
TACTACTTGGATACGTTTGCATAGCGCACCCCGTTATTTGCAAGGAGCCA
GCGTGTACTTGTAATGTTTGATGCTGGGCGAGTGCTGCCAGGTGCATATT
GGTGAGACTGGCTCTGGGGATATTGCCGGAAACGTTTCATGACCGAATGG
GTCATGTGGAAGAGGGTCAGCTCGTTTTTTATAAAGGTTTTCGTTAGCTA
CTCCCAACCAAGTTTTTTCTGGTCCTGAACAACTGCTGTTATGACTCACT
CGACGCTAACGACGACAACGCCTGTTTCGTGAAGTATCCTGGGGTGAGAC
GGGAAGGAAAGTGGGCGTGATCTGTGGCTACGAAAGAAAAGAGAAGCGCA
TGGTAGGTACTGTAATTGCTGTCGCTGTCTACTCACATGTTCCCGGTGTT
GATCGCTCCCCCTTCCGCGGGTAAAACTCCAGAAATACGCCGCGACAGGC
AGACTGCCCGGAATGCGACTTGTTTGGAGTCACGGCCGTGCGGTGCGGTG
TTGTACATG
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Coding sequence (CDS) from alignment at Scaffold_323:34726..39384-

>EsuBft889_8a-0001 ID=EsuBft889_8a-0001|Name=EsuBft889_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=798bp|location=Sequence derived from alignment at Scaffold_323:34726..39384- (Ectocarpus subulatus male Bft15b)
ATGGTTTGTGACAAGAAGATGGGTGCTCGTACTGTCTCGGGGCAGAGACT
TACCCGAACCGTGAGAGTCCCAAGAGTGATCGCGCTGGCTACCCTCCCGG
AGAGGCGAGGAGCGGCGTTGATCCTGGAGTACGTCAAGATGGAAACCATG
TCCACTGAGGAGCAACGCAAGGTGGGCTGTGGTGAAGAACTAGCCATGAG
TGCGCCGCAGGAACTCGGAGCCCTGTCGCCGTACGGAGCGCGTTCTTGCC
AGCTCGTCGATGAACCTTGTCATCCCGTGAAACACCTGGTGCGGCGAGTC
GCTGCAGATCAACGACTGGGAAGACGACTGGTGCAACTTCTTATCCAAGC
ACAGGCTGGGCCGACAGGCAGAGATGATCCTGGAGAAGCACGGGGATCAC
GAGGTAGCCACCAAGGTGTAGAAACTCAGGGTGAACCTTCGCGAGAGGAT
TTGGAAATCACGCCTAGCCTCCTGCACGGAAATCTGTGGAGTCGAAACTG
GGGTGTGGACTACAGCGGCAAGCCCGTCATCTACGACCCCGCAGTCTACT
TTGGCCACTACGAGATGGAGATGAGCATGTTGACAATGTTCGGATCACCT
TGCAAAGGCTTCTTCGTCAGGTACCACGACCTCTTGCCGAGGGAGGAACC
GGGTTACCAGGACAGGATAATGCTGTATCAGCTGTACCACTACCTCAACC
TGTACCTGCAGCATGGGAGAGGCTTCCGGAGCCCGTGCATGGCGTTGGTC
AAGACTCTTCTGGCCCCCAGCATTCCTAGCGGCAGCAGCAGCGGGTGA
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