EsuBft885_4a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft885_4a-0001
Unique NameEsuBft885_4a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_84contigScaffold_84:98171..103260 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog7425.NV18849-PA
ProteomeIdEsuBft885_4
Protein domainsIPR013103
Protein domainsPTHR11439
Protein domainsIPR012337
Ownerapollo_admin@sb-roscoff.fr
Noteretrovirus-related pol polyprotein from transposon tnt 1-94 os:nicotiana tabacum pe:2 sv:1 [Automatic annotation]
Nb exon6
Max annot lvl33208|Metazoa
Length3675
Hectar predicted targeting categoryother localisation
Evalue2.22e-41
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,38DPC@33154|Opisthokonta,3BGB6@33208|Metazoa,3D5G4@33213|Bilateria,41ZUZ@6656|Arthropoda,3SKEY@50557|Insecta
Date last modified2016-06-14
Date creation2016-06-14
DescriptionReverse transcriptase (RNA-dependent DNA polymerase)
COG categoryL
Cross References
External references for this mRNA
DatabaseAccession
GO0003676
GO0003824
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft885_4aEsuBft885_4aEctocarpus subulatus male Bft15bgeneScaffold_84 98171..103260 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft885_4a-0001EsuBft885_4Ectocarpus subulatus male Bft15bpolypeptideScaffold_84 98171..102984 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft885_4a-0001-exonagat-exon-109723Ectocarpus subulatus male Bft15bexonScaffold_84 98171..98321 +
EsuBft885_4a-0001-exonEsuBft885_4a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_84 98507..99309 +
EsuBft885_4a-0001-exonagat-exon-109721Ectocarpus subulatus male Bft15bexonScaffold_84 99502..99687 +
EsuBft885_4a-0001-exonagat-exon-109719Ectocarpus subulatus male Bft15bexonScaffold_84 100088..101132 +
EsuBft885_4a-0001-exonagat-exon-109722Ectocarpus subulatus male Bft15bexonScaffold_84 101336..101415 +
EsuBft885_4a-0001-exonagat-exon-109720Ectocarpus subulatus male Bft15bexonScaffold_84 101851..103260 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft885_4a-0001-cdsEsuBft885_4a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_84 98171..98321 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft885_4a-0001-exonagat-three_prime_utr-22685Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_84 102985..103260 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft885_4a-0001 ID=EsuBft885_4a-0001|Name=EsuBft885_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3675bp|location=Sequence derived from alignment at Scaffold_84:98171..103260+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGCAGCAGCTGAATGAGCTCCAGCTCTCGGACGAGCAGCGAAACGT
AATCAACGCCCTTATCAAGGAGCAGGTCAAGATCAAAGTAGAAGAAGCAG
CAGCAGCAGAGCGCCCCGCAGCACAGAGCGAGGGCATGCCTTCCGAAGGA
GGCATCACAATCCCTGCATTCTCCGGGAAGTTTAGCCCCGAGGACGATGT
ACAGACGGCGGTAATGGTTTTCACCAGTCAATTTCGATCTTTGTTGAAGC
AGGAGCGTTGCCTTGGGGCAATAGAATCGAAGAACACGATTCGTGTAGGG
AAGACGGATGCGAATATCTCGGCATTGAAGGTGGAGCATGGGACGGAAGC
TGTAGATCGGGCGGTTAAGGCTTGGCAGCTAATTATATCCAACATGCAAG
TACCGACAATATTCCCTGCAATCCTAGCGAGTGGTTGCCCAACTGAATCG
TGGGATCAATTTCTCAACTTTTACCGAGTGCACGCAGAAACGGAAAAGTT
GGAGCTGCAGGGGCAGAGGTACTCGTTGAAGCAGCAAGTAGGGGAGGAGC
CCCTGCGCTATCTCACAAGAGCATCAGTACTTCGCCAGAACCTAGAAGCG
TACGGTTGGGTGCAATCCGATCATGATGCTAACTTCCACTATGTACGCAA
CCTTCTGCCCGATTTCAATGTGCAGAGGAGCGTGTTGTTGGCGCATTCGG
AGATCACGACGAAATTGGTAGAGAAGGTGATTATGACTTCCTGGGCGGAG
ACGGAGGCCGCTAGGAAGAGGGCGTCGGAGAGCGTGGGGGCGTATGCCCT
CGTCACTGGCGGTGATAACCGTGGTGGCGGGGGCGGGAACATGGGGGATA
GGGGGAAGACGAGAGGACAACGGAGGACGGCAGCGCGGCAACAGCAGCAA
CAACCGCAGCAGCCACAGCAGCAGCATCAGCCGTACTTCAAGCAGCAGCA
ACAGCCGGCAGGAGGAAGATTCGGGGGGCGTGTCGCCGCGTCTAGTGGGA
GGGGCAGGGTCCCTTTCCACCAGGGACCGCCGGGAAGCAACCTCCCCGCC
TACCCTGTACCTCAGCGGGGCTACGACTACAGCGCCTACNCAGAGCAGGG
AGATTACGAGTGGGCTGTGTACCTATTGGAACAAAGAGAGATTTTCGCGG
TGGAAAAGCTGTACGGGATGGGGCGCAAGTCGGACACCCTCGCCTTCATC
AAGAAGTTCCTCGCCGACATGAGTCGCACCGGTGTCCCTCGTTCTTTCCG
GATGGACAACGGGGGGGATTTCGTCAGCCGCGGCTTCATCGCCTTCTGCG
ACGCCGGCATCCGCCGTACGTACACGGCGCCGGGCACCCCGCAGCAACGG
CGACAACCATCACGAGTCGGTGGTCAAGGTCCTCAAGGATGCGACGGGGC
GCGTGTGCATGACGAACAACGTCGTATGGGTCTCCGACCGCGCGCCGTTG
CTGACCCCGCCGCTGGAGATGCCGGCGCCGGCCGGCGAGGGGGGGGGGAT
TCGGATGTCGCCGCCGCACGGTTTCGAATTGAGTACATTTCACCGCCTCT
GTTACCCCCCTCACCGTTCGCCCGATATCCCACTTTACCCACTGCCATAT
CCTCACAGGCACCGCCGGCAACTTCCACACCACCATCGCCGGCGGCGCCG
TCTACCGCAGCCACACCATCTCCAACGGTCACCGCGCCGCCTGCAACACC
ACATGTAACGCCACAGTTCAGCACCACCGCGCCGCCTGCAACGCCGTTTG
CCGTCGTGCCACCGACTCCCGCCGTCGCGCCGCCCGGTGCCGCGCCATCG
ACCAACATGCCGCCGCTCACTGCGAGGACCATCCGTGAACTGGACGTGGG
GCCCGGGGGCATGAGGGTTTCTGGGCGCACGAGGGCAGCCGCTAAGGACC
AAGGGGGGGGGCGGGCGTCGTCAATGCCGCCCCTCTCTGCCAGGGCCAAT
CGAGAGCTGGACTTGGGACGAGAGACGCGGGTGCCAGGGAGATTGAGGGG
TCGGGGGGTGCGTTTCCAGAATGGGGAGGCCGAACGGTCGACGTCACCTG
GCGGGAGCGGCGACGCTCCCGCCCACCACTTCGGGCTTGTATCGCTGCAG
GACAAGGCAACGCTCCTGTCGACTCTCACCACTCGCAGCGTCGTCGATAG
GGGGAGAAAGGAGATTCCGAGTTCAGGCGGAGGACGGAGGCAGCAACCAC
AGAGTGTCATCAAGGCCAAGTGGGTGTTTAACTGGAAGTCTGATGAGTAT
GGATGGCCGACTAGTGCGGATACGTGTGTGTTTCGGTTGATCGAGGAGGG
AAGAGTGGCAGTGACTCTGGTAGTACATGTGGATGACATATTTTCGATTG
GAGAGGAGGAGAGGTGTGACCAATTTGGTAGGGAACTCAACACCATGGTA
CGGNTCGAGGAGGGAAGAGTGGCAGTGACTCTGGTAGTACATGTGGATGA
CATATTTTCGATTGGAGAGGAGGAGAGGTGTGACCAATTTGGTAGGGACC
TCAACACCATGGTACCTGTGAATAATCTTGGTGACTTGAGGTGGTACTCT
GGATGTTTTTATGAGAGGGATTGGGATGCAGGGACTTTGAAGATCTCGCA
GCAGACGTACGCTGAAGAGTTGGGGATGGAGTTTGGGGTAGAATACGGGA
AGGAAATTCCTCTTCCTGTAGGGTTGGTGCTTTCAGAGTTTGACCAGGAT
GAGGAAGTGGTATCATGGCCGTTTCGCGAGCTGATAGGATCACTGGTGTG
GCTGGCAACACAAACGAGGCCAGATATCGCGAATGCATTAAGAGCGGTAG
CACGGTACTGTGCTTCTCCCAAAGAAATTCATTGGAGAGCAGGTCTTGGT
ATTTTGGGGTATGTAGTAAGGACTAGTGACTTGGGAATTACGTTCGGGAG
GGGTAGTGTAGCAATGTTGAGCATGGAGGTGTTCGGAGACGCAGACTATG
CAAGCAAGGCTGCCGATAGGAGGTCTGTGTCAGGGGGATTGGTGATGTGT
GGGGGGGGATGTATTTCTTGGTTTTCAAGGACGCAGAAGTGCGTTACGTT
GAGCACGACGGAGGCGGAGTATGTCTCCGTTGCGGATGTGATGAAGGAAC
TGTTGTTTCTGAGGAAGGTATGGCGTTTCATGTTGCCAGAAGCAGGTATG
CCGTGTATTCCGGTGTTCGAGGATAACCAGAGGGCTCTTCAGTTGGCGCA
GAACCCGATTAGCAACAGTAACTCGAAGCACATCGACGTAAGGCACCACT
CTATCAGGGAACTGGTAGGCAGGGAGGAGATTTCGATTTTTCACGTGGAA
TCAGCGTATCAACATGCTGACTTCCTCACGAAGGCACTTCACGTCGGAGA
TTTTGAATTTCATCGTAATTTCGTGATGAATGTGGGACAGGAACGGTAGA
GTTGGATTTATTTGTGTTTGATCAAAGAACTAGGGTGGCATTGATTTACA
TTTTTGCCAATGGTCTTCTCAATGAATGGTGCTCTAGGATGGGGGGCAAT
TGGATCGCTATGATTATCGAAGAACTACAACTGGAATGATCGGGGATGGA
AATATATTTCTAGCCCAGAAGGCTATGTTGCAGATATGAGTTGTGATTTG
TATTATTTTTTGTGTTTTGGAGTTACTGAACGATCATGAAGACATGGCAT
AGTCACAAGCAGGGGGGCTGATAGA
back to top

protein sequence of EsuBft885_4a-0001

>EsuBft885_4 ID=EsuBft885_4|Name=EsuBft885_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=1132bp
MEQQLNELQLSDEQRNVINALIKEQVKIKVEEAAAAERPAAQSEGMPSEG
GITIPAFSGKFSPEDDVQTAVMVFTSQFRSLLKQERCLGAIESKNTIRVG
KTDANISALKVEHGTEAVDRAVKAWQLIISNMQVPTIFPAILASGCPTES
WDQFLNFYRVHAETEKLELQGQRYSLKQQVGEEPLRYLTRASVLRQNLEA
YGWVQSDHDANFHYVRNLLPDFNVQRSVLLAHSEITTKLVEKVIMTSWAE
TEAARKRASESVGAYALVTGGDNRGGGGGNMGDRGKTRGQRRTAARQQQQ
QPQQPQQQHQPYFKQQQQPAGGRFGGRVAASSGRGRVPFHQGPPGSNLPA
YPVPQRGYDYSAYXEQGDYEWAVYLLEQREIFAVEKLYGMGRKSDTLAFI
KKFLADMSRTGVPRSFRMDNGGDFVSRGFIAFCDAGIRRTYTAPGTPQQR
RQPSRVGGQGPQGCDGARVHDEQRRMGLRPRAVADPAAGDAGAGRRGGGD
SDVAAARFRIEYISPPLLPPSPFARYPTLPTAISSQAPPATSTPPSPAAP
STAATPSPTVTAPPATPHVTPQFSTTAPPATPFAVVPPTPAVAPPGAAPS
TNMPPLTARTIRELDVGPGGMRVSGRTRAAAKDQGGGRASSMPPLSARAN
RELDLGRETRVPGRLRGRGVRFQNGEAERSTSPGGSGDAPAHHFGLVSLQ
DKATLLSTLTTRSVVDRGRKEIPSSGGGRRQQPQSVIKAKWVFNWKSDEY
GWPTSADTCVFRLIEEGRVAVTLVVHVDDIFSIGEEERCDQFGRELNTMV
RXEEGRVAVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVNNLGDLRWYS
GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLVLSEFDQD
EEVVSWPFRELIGSLVWLATQTRPDIANALRAVARYCASPKEIHWRAGLG
ILGYVVRTSDLGITFGRGSVAMLSMEVFGDADYASKAADRRSVSGGLVMC
GGGCISWFSRTQKCVTLSTTEAEYVSVADVMKELLFLRKVWRFMLPEAGM
PCIPVFEDNQRALQLAQNPISNSNSKHIDVRHHSIRELVGREEISIFHVE
SAYQHADFLTKALHVGDFEFHRNFVMNVGQER
back to top

mRNA from alignment at Scaffold_84:98171..103260+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft885_4a-0001 ID=EsuBft885_4a-0001|Name=EsuBft885_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5090bp|location=Sequence derived from alignment at Scaffold_84:98171..103260+ (Ectocarpus subulatus male Bft15b)
ATGGAGCAGCAGCTGAATGAGCTCCAGCTCTCGGACGAGCAGCGAAACGT AATCAACGCCCTTATCAAGGAGCAGGTCAAGATCAAAGTAGAAGAAGCAG CAGCAGCAGAGCGCCCCGCAGCACAGAGCGAGGGCATGCCTTCCGAAGGA GGTGACACCCGGCTGGAGAGGCGGGCTGGCTCGGAGTCAAGCCCGCGACC CGAAGACCAGCCCCGATCGCCGGCGGACGTCAGCCTCATCGACATCCTCG CGCGGGCCTTGCAGAGGGTCAAGATAAAACCGGAGGATGAATACAGGGAA GTCCCAACCCCTAGAGAATAATACGTATTAGCGCAGGCATCACAATCCCT GCATTCTCCGGGAAGTTTAGCCCCGAGGACGATGTACAGACGGCGGTAAT GGTTTTCACCAGTCAATTTCGATCTTTGTTGAAGCAGGAGCGTTGCCTTG GGGCAATAGAATCGAAGAACACGATTCGTGTAGGGAAGACGGATGCGAAT ATCTCGGCATTGAAGGTGGAGCATGGGACGGAAGCTGTAGATCGGGCGGT TAAGGCTTGGCAGCTAATTATATCCAACATGCAAGTACCGACAATATTCC CTGCAATCCTAGCGAGTGGTTGCCCAACTGAATCGTGGGATCAATTTCTC AACTTTTACCGAGTGCACGCAGAAACGGAAAAGTTGGAGCTGCAGGGGCA GAGGTACTCGTTGAAGCAGCAAGTAGGGGAGGAGCCCCTGCGCTATCTCA CAAGAGCATCAGTACTTCGCCAGAACCTAGAAGCGTACGGTTGGGTGCAA TCCGATCATGATGCTAACTTCCACTATGTACGCAACCTTCTGCCCGATTT CAATGTGCAGAGGAGCGTGTTGTTGGCGCATTCGGAGATCACGACGAAAT TGGTAGAGAAGGTGATTATGACTTCCTGGGCGGAGACGGAGGCCGCTAGG AAGAGGGCGTCGGAGAGCGTGGGGGCGTATGCCCTCGTCACTGGCGGTGA TAACCGTGGTGGCGGGGGCGGGAACATGGGGGATAGGGGGAAGACGAGAG GACAACGGAGGACGGCAGCGCGGCAACAGCAGCAACAACCGCAGCAGCCA CAGCAGCAGCATCAGCCGTACTTCAAGCAGCAGCAACAGGTATACCCGCC GCCGTACCCGCCTGAGATAAAATATTGTGACCTCCACAACTCCTCGTCCC ACAGCAACGAGGAATGTCGCTTAGAGCGGGGTTGGGGAGGTCCCTCGGGC GGCCGAGATGCGAGCTACGGCGGAAGGCACGGGCCCCAGCATGGAGGCCA GCATTTTTCTGGAGGACGTCATCAGCAGCAGCCGGCAGGAGGAAGATTCG GGGGGCGTGTCGCCGCGTCTAGTGGGAGGGGCAGGGTCCCTTTCCACCAG GGACCGCCGGGAAGCAACCTCCCCGCCTACCCTGTACCTCAGCGGGGCTA CGACTACAGCGCCTACNCAGAGCAGGGAGATTACGAGTGGGCTGTGTACC TATTGGAACAAAGAGAGGTATCAGAAGACCCCTACGAGTTTTTAGACTTA ATGGTTGAGGCTGGATTTGCAAATGTCTTCGATGATGTTGCTTTCGCTGT CCCAGTCATGGCCGCGGGCAAGCGCCCTTTTTCGGTAGGGAACCCCACCA AGATTATTGGCCTTAACCTTCTCCACGTTTCGTGCTCCCACGCCAATGAG ATTCTCTCGCGTGAGCTTGCAAAGCAGCACGGTCTCCGACTGACCGGCGT CCTGCAGCCTTGTGGTGGATGTCTGCAGGCGAAGGGGAAGAAGGCGGGCG TGCCTCACCAATAGGGCACGCCACAGAGCGGCCGCACGATCTTTGGCATA TCGATCTGTGTGGGCCGATGACGACCTCGCTGGGTAGGTCGTTTTTCATG ATTATGTTCGTGGACAGATTTTCGCGGTGGAAAAGCTGTACGGGATGGGG CGCAAGTCGGACACCCTCGCCTTCATCAAGAAGTTCCTCGCCGACATGAG TCGCACCGGTGTCCCTCGTTCTTTCCGGATGGACAACGGGGGGGATTTCG TCAGCCGCGGCTTCATCGCCTTCTGCGACGCCGGCATCCGCCGTACGTAC ACGGCGCCGGGCACCCCGCAGCAACGGCGACAACCATCACGAGTCGGTGG TCAAGGTCCTCAAGGATGCGACGGGGCGCGTGTGCATGACGAACAACGTC GTATGGGTCTCCGACCGCGCGCCGTTGCTGACCCCGCCGCTGGAGATGCC GGCGCCGGCCGGCGAGGGGGGGGGGATTCGGATGTCGCCGCCGCACGGTT TCGAATTGAGTACATTTCACCGCCTCTGTTACCCCCCTCACCGTTCGCCC GATATCCCACTTTACCCACTGCCATATCCTCACAGGCACCGCCGGCAACT TCCACACCACCATCGCCGGCGGCGCCGTCTACCGCAGCCACACCATCTCC AACGGTCACCGCGCCGCCTGCAACACCACATGTAACGCCACAGTTCAGCA CCACCGCGCCGCCTGCAACGCCGTTTGCCGTCGTGCCACCGACTCCCGCC GTCGCGCCGCCCGGTGCCGCGCCATCGACCAACATGCCGCCGCTCACTGC GAGGACCATCCGTGAACTGGACGTGGGGCCCGGGGGCATGAGGGTTTCTG GGCGCACGAGGGCAGCCGCTAAGGACCAAGGGGGGGGGCGGGCGTCGTCA ATGCCGCCCCTCTCTGCCAGGGCCAATCGAGAGCTGGACTTGGGACGAGA GACGCGGGTGCCAGGGAGATTGAGGGGTCGGGGGGTGCGTTTCCAGAATG GGGAGGCCGAACGGTCGACGTCACCTGGCGGGAGCGGCGACGCTCCCGCC CACCACTTCGGGCTTGTATCGCTGCAGGACAAGGCAACGCTCCTGTCGAC TCTCACCACTCGCAGCGTCGTCGATAGGGGGAGAAAGGAGATTCCGAGTT CAGGCGGAGGACGTGAAGGAGCGGAGCCGGGGGGGCGAGAGCTGGGGGGG CATAAAAACAGAAAGACTGCGTGAAGAAGTCCCATTTGCGTGCGCCACCT TGCTTGCCTCCCGCGAGGACATTGATCGAACGATGAGGGATTTAAATCCC CCGGAAGTGGCACCGGACTTCCCACATTGCCATGCCAACGACTTGCGCGT GCCCAACACTTACAGGGAGGCAGCAACCACAGAGTGTCATCAAGGCCAAG TGGGTGTTTAACTGGAAGTCTGATGAGTATGGATGGCCGACTAGTGTGAA ATCACGGCTNNNNNNNNNNNNNNNNNNAGCAACCAGAGAGTGTCATCAAG GCCAAGTGGGTGTTTAACTGGAAGTCTGATGAGTATGGATGGCCGACTAG TGTGAAATCACGGCTTGTAGCGAGAGGAGATATGCAGCGAGTACATGTAG ATTGTAGAGAGACGTATGCACCGCGGTTTCTAGCGTTCGCTTGTTGGCAG CGATGGCATGTGAGCAAAATCTTTCTCTTCGTCATTTTGACATCAAGCAA GCATTTGTCCAGTCGGATTTGGATGAGGATGTTTTCATGCGTCTGCCAGA GGGATGTGGTAGATTGTCAGGCATGATAGTGAAGTTGAACAAGAGTCTGT AAAGCCTCAAGCAGGCATCAAGGCAATGGCATTCACATTTGGCGAGGTGT TTGATTTGTTTGGGTTTTATTCAGTGTCAGGCGGATACGTGTGTGTTTCG GTTGATCGAGGAGGGAAGAGTGGCAGTGACTCTGGTAGTACATGTGGATG ACATATTTTCGATTGGAGAGGAGGAGAGGTGTGACCAATTTGGTAGGGAA CTCAACACCATGGTACGGNTCGAGGAGGGAAGAGTGGCAGTGACTCTGGT AGTACATGTGGATGACATATTTTCGATTGGAGAGGAGGAGAGGTGTGACC AATTTGGTAGGGACCTCAACACCATGGTACCTGTGAATAATCTTGGTGAC TTGAGGTGGTACTCTGGATGTTTTTATGAGAGGGATTGGGATGCAGGGAC TTTGAAGATCTCGCAGCAGACGTACGCTGAAGAGTTGGGGATGGAGTTTG GGGTAGAATACGGGAAGGAAATTCCTCTTCCTGTAGGGTTGGTGCTTTCA GAGTTTGACCAGGATGAGGAAGTGGTATCATGGCCGTTTCGCGAGCTGAT AGGATCACTGGTGTGGCTGGCAACACAAACGAGGCCAGATATCGCGAATG CATTAAGAGCGGTAGCACGGTACTGTGCTTCTCCCAAAGAAATTCATTGG AGAGCAGGTCTTGGTATTTTGGGGTATGTAGTAAGGACTAGTGACTTGGG AATTACGTTCGGGAGGGGTAGTGTAGCAATGTTGAGCATGGAGGTGTTCG GAGACGCAGACTATGCAAGCAAGGCTGCCGATAGGAGGTCTGTGTCAGGG GGATTGGTGATGTGTGGGGGGGGATGTATTTCTTGGTTTTCAAGGACGCA GAAGTGCGTTACGTTGAGCACGACGGAGGCGGAGTATGTCTCCGTTGCGG ATGTGATGAAGGAACTGTTGTTTCTGAGGAAGGTATGGCGTTTCATGTTG CCAGAAGCAGGTATGCCGTGTATTCCGGTGTTCGAGGATAACCAGAGGGC TCTTCAGTTGGCGCAGAACCCGATTAGCAACAGTAACTCGAAGCACATCG ACGTAAGGCACCACTCTATCAGGGAACTGGTAGGCAGGGAGGAGATTTCG ATTTTTCACGTGGAATCAGCGTATCAACATGCTGACTTCCTCACGAAGGC ACTTCACGTCGGAGATTTTGAATTTCATCGTAATTTCGTGATGAATGTGG GACAGGAACGGTAGAGTTGGATTTATTTGTGTTTGATCAAAGAACTAGGG TGGCATTGATTTACATTTTTGCCAATGGTCTTCTCAATGAATGGTGCTCT AGGATGGGGGGCAATTGGATCGCTATGATTATCGAAGAACTACAACTGGA ATGATCGGGGATGGAAATATATTTCTAGCCCAGAAGGCTATGTTGCAGAT ATGAGTTGTGATTTGTATTATTTTTTGTGTTTTGGAGTTACTGAACGATC ATGAAGACATGGCATAGTCACAAGCAGGGGGGCTGATAGA
back to top

Coding sequence (CDS) from alignment at Scaffold_84:98171..103260+

>EsuBft885_4a-0001 ID=EsuBft885_4a-0001|Name=EsuBft885_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=3399bp|location=Sequence derived from alignment at Scaffold_84:98171..103260+ (Ectocarpus subulatus male Bft15b)
ATGGAGCAGCAGCTGAATGAGCTCCAGCTCTCGGACGAGCAGCGAAACGT
AATCAACGCCCTTATCAAGGAGCAGGTCAAGATCAAAGTAGAAGAAGCAG
CAGCAGCAGAGCGCCCCGCAGCACAGAGCGAGGGCATGCCTTCCGAAGGA
GGCATCACAATCCCTGCATTCTCCGGGAAGTTTAGCCCCGAGGACGATGT
ACAGACGGCGGTAATGGTTTTCACCAGTCAATTTCGATCTTTGTTGAAGC
AGGAGCGTTGCCTTGGGGCAATAGAATCGAAGAACACGATTCGTGTAGGG
AAGACGGATGCGAATATCTCGGCATTGAAGGTGGAGCATGGGACGGAAGC
TGTAGATCGGGCGGTTAAGGCTTGGCAGCTAATTATATCCAACATGCAAG
TACCGACAATATTCCCTGCAATCCTAGCGAGTGGTTGCCCAACTGAATCG
TGGGATCAATTTCTCAACTTTTACCGAGTGCACGCAGAAACGGAAAAGTT
GGAGCTGCAGGGGCAGAGGTACTCGTTGAAGCAGCAAGTAGGGGAGGAGC
CCCTGCGCTATCTCACAAGAGCATCAGTACTTCGCCAGAACCTAGAAGCG
TACGGTTGGGTGCAATCCGATCATGATGCTAACTTCCACTATGTACGCAA
CCTTCTGCCCGATTTCAATGTGCAGAGGAGCGTGTTGTTGGCGCATTCGG
AGATCACGACGAAATTGGTAGAGAAGGTGATTATGACTTCCTGGGCGGAG
ACGGAGGCCGCTAGGAAGAGGGCGTCGGAGAGCGTGGGGGCGTATGCCCT
CGTCACTGGCGGTGATAACCGTGGTGGCGGGGGCGGGAACATGGGGGATA
GGGGGAAGACGAGAGGACAACGGAGGACGGCAGCGCGGCAACAGCAGCAA
CAACCGCAGCAGCCACAGCAGCAGCATCAGCCGTACTTCAAGCAGCAGCA
ACAGCCGGCAGGAGGAAGATTCGGGGGGCGTGTCGCCGCGTCTAGTGGGA
GGGGCAGGGTCCCTTTCCACCAGGGACCGCCGGGAAGCAACCTCCCCGCC
TACCCTGTACCTCAGCGGGGCTACGACTACAGCGCCTACNCAGAGCAGGG
AGATTACGAGTGGGCTGTGTACCTATTGGAACAAAGAGAGATTTTCGCGG
TGGAAAAGCTGTACGGGATGGGGCGCAAGTCGGACACCCTCGCCTTCATC
AAGAAGTTCCTCGCCGACATGAGTCGCACCGGTGTCCCTCGTTCTTTCCG
GATGGACAACGGGGGGGATTTCGTCAGCCGCGGCTTCATCGCCTTCTGCG
ACGCCGGCATCCGCCGTACGTACACGGCGCCGGGCACCCCGCAGCAACGG
CGACAACCATCACGAGTCGGTGGTCAAGGTCCTCAAGGATGCGACGGGGC
GCGTGTGCATGACGAACAACGTCGTATGGGTCTCCGACCGCGCGCCGTTG
CTGACCCCGCCGCTGGAGATGCCGGCGCCGGCCGGCGAGGGGGGGGGGAT
TCGGATGTCGCCGCCGCACGGTTTCGAATTGAGTACATTTCACCGCCTCT
GTTACCCCCCTCACCGTTCGCCCGATATCCCACTTTACCCACTGCCATAT
CCTCACAGGCACCGCCGGCAACTTCCACACCACCATCGCCGGCGGCGCCG
TCTACCGCAGCCACACCATCTCCAACGGTCACCGCGCCGCCTGCAACACC
ACATGTAACGCCACAGTTCAGCACCACCGCGCCGCCTGCAACGCCGTTTG
CCGTCGTGCCACCGACTCCCGCCGTCGCGCCGCCCGGTGCCGCGCCATCG
ACCAACATGCCGCCGCTCACTGCGAGGACCATCCGTGAACTGGACGTGGG
GCCCGGGGGCATGAGGGTTTCTGGGCGCACGAGGGCAGCCGCTAAGGACC
AAGGGGGGGGGCGGGCGTCGTCAATGCCGCCCCTCTCTGCCAGGGCCAAT
CGAGAGCTGGACTTGGGACGAGAGACGCGGGTGCCAGGGAGATTGAGGGG
TCGGGGGGTGCGTTTCCAGAATGGGGAGGCCGAACGGTCGACGTCACCTG
GCGGGAGCGGCGACGCTCCCGCCCACCACTTCGGGCTTGTATCGCTGCAG
GACAAGGCAACGCTCCTGTCGACTCTCACCACTCGCAGCGTCGTCGATAG
GGGGAGAAAGGAGATTCCGAGTTCAGGCGGAGGACGGAGGCAGCAACCAC
AGAGTGTCATCAAGGCCAAGTGGGTGTTTAACTGGAAGTCTGATGAGTAT
GGATGGCCGACTAGTGCGGATACGTGTGTGTTTCGGTTGATCGAGGAGGG
AAGAGTGGCAGTGACTCTGGTAGTACATGTGGATGACATATTTTCGATTG
GAGAGGAGGAGAGGTGTGACCAATTTGGTAGGGAACTCAACACCATGGTA
CGGNTCGAGGAGGGAAGAGTGGCAGTGACTCTGGTAGTACATGTGGATGA
CATATTTTCGATTGGAGAGGAGGAGAGGTGTGACCAATTTGGTAGGGACC
TCAACACCATGGTACCTGTGAATAATCTTGGTGACTTGAGGTGGTACTCT
GGATGTTTTTATGAGAGGGATTGGGATGCAGGGACTTTGAAGATCTCGCA
GCAGACGTACGCTGAAGAGTTGGGGATGGAGTTTGGGGTAGAATACGGGA
AGGAAATTCCTCTTCCTGTAGGGTTGGTGCTTTCAGAGTTTGACCAGGAT
GAGGAAGTGGTATCATGGCCGTTTCGCGAGCTGATAGGATCACTGGTGTG
GCTGGCAACACAAACGAGGCCAGATATCGCGAATGCATTAAGAGCGGTAG
CACGGTACTGTGCTTCTCCCAAAGAAATTCATTGGAGAGCAGGTCTTGGT
ATTTTGGGGTATGTAGTAAGGACTAGTGACTTGGGAATTACGTTCGGGAG
GGGTAGTGTAGCAATGTTGAGCATGGAGGTGTTCGGAGACGCAGACTATG
CAAGCAAGGCTGCCGATAGGAGGTCTGTGTCAGGGGGATTGGTGATGTGT
GGGGGGGGATGTATTTCTTGGTTTTCAAGGACGCAGAAGTGCGTTACGTT
GAGCACGACGGAGGCGGAGTATGTCTCCGTTGCGGATGTGATGAAGGAAC
TGTTGTTTCTGAGGAAGGTATGGCGTTTCATGTTGCCAGAAGCAGGTATG
CCGTGTATTCCGGTGTTCGAGGATAACCAGAGGGCTCTTCAGTTGGCGCA
GAACCCGATTAGCAACAGTAACTCGAAGCACATCGACGTAAGGCACCACT
CTATCAGGGAACTGGTAGGCAGGGAGGAGATTTCGATTTTTCACGTGGAA
TCAGCGTATCAACATGCTGACTTCCTCACGAAGGCACTTCACGTCGGAGA
TTTTGAATTTCATCGTAATTTCGTGATGAATGTGGGACAGGAACGGTAG
back to top