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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft882_9 |
| Protein domains | Coil |
| Protein domains | IPR005162 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 292 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-06_002920.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft882_9a-0001 ID=EsuBft882_9a-0001|Name=EsuBft882_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2929bp|location=Sequence derived from alignment at Scaffold_618:940756..944295- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GAGGGCGGAAAGCCGCACCCCGGTGAGAAAAGTTGGCCTACGCAGCAGCA GCAACAGCCAATGACTCTCCGCGAGCAGCTCCAAAAACTCGTTTCGCAGA AACTCGCCGCAAAGGGTGAGCTTGACCATGCCGGGCTTTTGGCTTTGGAA ACGCTCAGCAAGATGGCACCGGAGGGCGAAGTGGATCCAGTTGGTGGATC ATCTGCTGGTGGTGGTGCTAGTGTTGGTGTTGTTGACTCTCGTCCTAGGA GAATCCTCCCGCCTGGCATCGAGAAATTGACGAAATTTAGCGGCAAGGAT CCTGGTGCTGTGTCCGACGTGCTCAACAGATTCCACTCCCTTGTCGTCGC GGCCCTGCCTGGCAGCTCGCCTGGCACAGTGAATAAGGCTCTGAACCGAG ATGTCGTGTTTGTCTTGGAGGGTGCAGCCCTGAAGTTCTTCAAATTGCTG AAAGCAGGACAGATAGAGTGGGAACCTACCCCGCCTCCCTCCCTCCAGCA GCGGGGGGCAGAGGCGGGAGCAGGGGGCGTTCAGCAACAACCAGGAAAGC CACCTTTCCGGCCCCCGTCGACCTGGGCTGAAGTCTACAATGCTTTCCAC GACCACTATCTGCCGGCGGATGGCATCGCACGGACATCAGACACACTATT TTCACTTCGCCAAGCTGCAGACGAATCCGTCCCGACGTTGGTCCAGCGAC AAATGGGCCTGACCAATCACTTGAGCCGGTTAATTGAAGCCAACGGGGGG CAGACAACTTTTTGGGAAGCAATCATGATACGGTTGTTCGAGAGAGCGCT CCGCGCCGACCTGCAGCGGCTTCAGCACGCGGAGCCTCCGTGCCCGACTT TTCAGGAAAGTGTTGACCGTGCAGATCGTAACGCTCTAAGATTGGAGAAG GAGAAGAGTAAGAGAAGGAATGATGCTGGCGAAGGAGGTGGCGGTGGAGA GCGTCCGCCAGAGGACAATCGACTTCGCCTCGGCACGAAACCGCAGGGCG GCAGCAGTGGTGTGGGAGAGGGGAAGGGAGGGGTGCAAAGTTCAGATGGT TCGAAAGGACCAGCGCTTGTCGGGTCTTCTTCATCGTTGGCCAGGGGTCC GCTGACCTTGTCGGGTACCTTTGAAGACGTGGCTCCTGTTGTAGGGGGCT TCCAGCCCCCACACGGGAAGACAGAGAAAAAACTTGGTGGAGGAGGCGCA GGAGAGGGACGTGAGGGTGATCGACTTCAGCACGGTAGTAAAACGCAGCG CAACAGTGACGTAGGAGATGGGAAGGAACTGGTGCACGGCTGGGGTGGCT TGAAGGGGGCAGCGCATGCCCGGTCTCCTTCTGTGGTCAGGGGTCCGCTT ACCGTGCCAGGTGACGTTGAAGGCGAAACTGTTGCTGTGGGGAGCTTCCA AACCGGACACGGGAGAAGTGCAGACCGAAACGGCGGTGGAGACCGGGAAA GGGCCGAGAGCATCTTGTCTGACGATGAGTCCCGATCCACCCCTGCTTGG CAAGAAGAGCCGGAAGAACAAGTAGTGCCTGGAGGATCTGGGGAGTGGGG CGATGGTGGTGAGGTCAAACACGATCGCAGCCGTGGGTCGCGAGGCAAGA AGTCTCAAAAGCGAACGCGGGATTGGCAAGAAGACCAGGGCCGCAAGCGG GACAGGCAAGAAGACCAGACCCCTTCGCGGAACAAGCAAGAAGGCCATCA TGCCCGTGCCCAGCGTCGTCCATCTCAGCCCCACCGGCGGCGGCAGCCAG TTCCCGACAACGTACTGCCGTGTACCAATCCAGCGTGCAAGGCGAAGCGA AAAACTCATTCTTCGAACATCTGTTTTTACCACCCAGACCCGGCACAAGC TCTACGAAACCGGATGAGAAGGAAAGACATATTCTTGAAGACCCATGCTA TGGAGGACGCGGGTAACGATGCGGGTAGTGGGCTCCACAACAATTTCGAC GAACCTGAGTTCTAGGGGGCGCTGAATCACCTCTACTGAACTTAAGTTTG GCAGGATGACGGATGGCCGTAGGCGCTAGCCGGGCAATTGAATATGGAAC GAGAGGGCGTGGGTGAAAGGTCGAGACGGCTTCGCAACTTCCAGCACGGG TTTGTCGACGACCCATCGGGAGTCACCTTGATATCCGCATAAGCGCGGTG CTTCGTGCATGCGTTTGTCGAAGGAGCAGTTGAAGGTCAACCTCTACTCA AATGGCCGACACGTAGAGACAAGAGGACGGCGTAAAGGATGATGGGCCAG CTTGCCGGCGTCAAAGCAGTGTTATTGGACCGATGTACGAAAGGAGACAA TTGACGAGATTTCCCACATTTACCTGGACCGTTGTGCACCAGAGTGTCGA AGGCGATCCTTCGTAGAAAAATCCTACGACTAGCGGCATCGCAGAGACTT GGGGTCAAGGTCTGATGACCTCGATATTAAGCTCTAGTGGGATGTGCGCT TGTCACACGTGCAACAGCACAATGTGGCCTTCGCTGGGAGCCGTGCTCCC TTCTACGCGCTGGAATTTCGACTTTTGAGAAGTCTAACGGCATGTCCGCC GTTGTCATTACAAGTAGGGTCAGGGACCTTCGCGTTACATAAGTTTCGCA TGCCATAGCCTTATGGTGGAACTCCACTTCCCGTGTTGTCGGATGTACGT CGTATAGAAGTGGGATAATTCTACCGAACGTTTGATGACGTGGTTGATCC GAAGAAACCTCCCTTGTATTTTTTAGTTTATACTTCGCACCACTTTTGCT GTAGCCCTCGAAAGCACCGGCTGCCTTACAGGCAGCTATGATTTGCATCG TGAGTTTCTGCCCAGACATATGTGTGCATGCATATTAAGAAGCTTGACCG GGTGACTGTGTGTGCGTGAATCGTTGCGTTGCAAATATGGGCAAAAATGC AACCATCTCGAGGACTGGGAAGATACGGC back to topprotein sequence of EsuBft882_9a-0001 >EsuBft882_9 ID=EsuBft882_9|Name=EsuBft882_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=634bp
MTLREQLQKLVSQKLAAKGELDHAGLLALETLSKMAPEGEVDPVGGSSAG GGASVGVVDSRPRRILPPGIEKLTKFSGKDPGAVSDVLNRFHSLVVAALP GSSPGTVNKALNRDVVFVLEGAALKFFKLLKAGQIEWEPTPPPSLQQRGA EAGAGGVQQQPGKPPFRPPSTWAEVYNAFHDHYLPADGIARTSDTLFSLR QAADESVPTLVQRQMGLTNHLSRLIEANGGQTTFWEAIMIRLFERALRAD LQRLQHAEPPCPTFQESVDRADRNALRLEKEKSKRRNDAGEGGGGGERPP EDNRLRLGTKPQGGSSGVGEGKGGVQSSDGSKGPALVGSSSSLARGPLTL SGTFEDVAPVVGGFQPPHGKTEKKLGGGGAGEGREGDRLQHGSKTQRNSD VGDGKELVHGWGGLKGAAHARSPSVVRGPLTVPGDVEGETVAVGSFQTGH GRSADRNGGGDRERAESILSDDESRSTPAWQEEPEEQVVPGGSGEWGDGG EVKHDRSRGSRGKKSQKRTRDWQEDQGRKRDRQEDQTPSRNKQEGHHARA QRRPSQPHRRRQPVPDNVLPCTNPACKAKRKTHSSNICFYHPDPAQALRN RMRRKDIFLKTHAMEDAGNDAGSGLHNNFDEPEF back to topmRNA from alignment at Scaffold_618:940756..944295- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft882_9a-0001 ID=EsuBft882_9a-0001|Name=EsuBft882_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3540bp|location=Sequence derived from alignment at Scaffold_618:940756..944295- (Ectocarpus subulatus male Bft15b) GAGGGCGGAAAGCCGCACCCCGGTGAGAAAAGTTGGCCTACGCAGCAGCA
GCAACAGCCAATGACTCTCCGCGAGCAGCTCCAAAAACTCGTTTCGCAGA
AACTCGCCGCAAAGGGTGAGCTTGACCATGCCGGGCTTTTGGCTTTGGAA
ACGCTCAGCAAGATGGCACCGGAGGGCGAAGTGGATCCAGTTGGTGGATC
ATCTGCTGGTGGTGGTGCTAGTGTTGGTGTTGTTGACTCTCGTCCTAGGA
GAATCCTCCCGCCTGGCATCGAGAAATTGACGAAATTTAGCGGCAAGGAT
CCTGGTGCTGTGTCCGACGTGCTCAACAGATTCCACTCCCTTGTCGTCGC
GGCCCTGCCTGGCAGCTCGCCTGGCACAGTGAATAAGGCTCTGAACCGAG
ATGTCGTGTTTGTCTTGGAGGGTGCAGCCCTGAAGTTCTTCAAATTGCTG
AAAGCAGGACAGATAGAGTGGGAACCTACCCCGCCTCCCTCCCTCCAGCA
GCGGGGGGCAGAGGCGGGAGCAGGGGGCGTTCAGCAACAACCAGGAAAGC
CACCTTTCCGGCCCCCGTCGACCTGGGCTGAAGTCTACAATGCTTTCCAC
GACCACTATCTGCCGGCGGATGGCATCGCACGGACATCAGACACACTATT
TTCACTTCGCCAAGCTGCAGACGAATCCGTCCCGACGTTGGTCCAGCGAC
AAATGGGCCTGACCAATCACTTGAGCCGGTTAATTGAAGCCAACGGGGGG
CAGACAACTTTTTGGGAAGCAATCATGATACGGTTGTTCGAGAGAGCGCT
CCGCGCCGACCTGCAGCGGCTTCAGCACGCGGAGCCTCCGTGCCCGACTT
TTCAGGAAAGTGTTGACCGTGCAGATCGTAACGCTCTAAGATTGGAGAAG
GAGAAGAGTAAGAGAAGGAATGATGCTGGCGAAGGAGGTGGCGGTGGAGA
GCGTCCGCCAGAGGACAATCGACTTCGCCTCGGCACGAAACCGCAGGGCG
GCAGCAGTGGTGTGGGAGAGGGGAAGGGAGGGGTGCAAAGTTCAGATGGT
TCGAAAGGACCAGCGCTTGTCGGGTCTTCTTCATCGTTGGCCAGGGGTCC
GCTGACCTTGTCGGGTACCTTTGAAGACGTGGCTCCTGTTGTAGGGGGCT
TCCAGCCCCCACACGGGAAGACAGAGAAAAAACTTGGTGGAGGAGGCGCA
GGAGAGGGACGTGAGGGTGATCGACTTCAGCACGGTAGTAAAACGCAGCG
CAACAGTGACGTAGGAGATGGGAAGGAACTGGTGCACGGCTGGGGTGGCT
TGAAGGGGGCAGCGCATGCCCGGTCTCCTTCTGTGGTCAGGGGTCCGCTT
ACCGTGCCAGGTGACGTTGAAGGCGAAACTGTTGCTGTGGGGAGCTTCCA
AACCGGACACGGGAGAAGTGCAGACCGAAACGGCGGTGGAGACCGGGAAA
GGGCCGAGAGCATCTTGTCTGACGATGAGTCCCGATCCACCCCTGCTTGG
CAAGAAGAGCCGGAAGAACAAGTAGTGCCTGGAGGATCTGGGGAGTGGGG
CGATGGTGGTGAGGTCAAACACGATCGCAGCCGTGGGTCGCGAGGCAAGA
AGTCTCAAAAGCGAACGCGGGATTGGCAAGAAGACCAGGGCCGCAAGCGG
GACAGGCAAGAAGACCAGACCCCTTCGCGGAACAAGCAAGAAGGCCATCA
TGCCCGTGCCCAGCGTCGTCCATCTCAGCCCCACCGGCGGCGGCAGCCAG
TTCCCGACAACGTACTGCCGTGTACCAATCCAGCGTGCAAGGCGAAGCGA
AAAACTCATTCTTCGAACATCTGTTTTTACCACCCAGACCCGGCACAAGC
TCTACGAAACCGGATGAGAAGGAAAGACATATTCTTGAAGACCCATGCTA
TGGAGGACGCGGGTAACGATGCGGGTAGTGGGCTCCACAACAATTTCGAC
GAACCTGAGTTCTAGGGGGCGCTGAATCACCTCTACTGAACTTAAGGTGA
GAGGGAAAAAATGGCTGCGACGATGTGTTGTGAAGCAGAGCAGGGTCAGG
CGGATAAGGGGACTTACGCCGTTGGAGCATGATGAATGTCCTCAATTGGG
CAGTTGGCTACGCGACAACATACATGACTTTCGTTCGTGTGAGTGCGACT
ACGACTGTCACGGCGTTGACGAACCTCCGGCCAAAATGAGGAGGCCACGT
CCTGTTGTCACGTTGCAGCAGAGAACTAGTGGCGCTCCCATTCGCGAGGT
GGATTTTGCAAAGGAAGGATTCCCAAAAACTGTGAGGTTTCGGCATGGTG
CAAAGGAAAAAACCTTTAAATTTCCCGGAAATTTCAGCGAAGTTGGCTGG
CCCTGTTCTGTTTGCGCACGTCGTCACCGTTTGGCCTTGCCGTACTTTGT
CAAGTCGCACACGTGCTTGGCTCTCTGTTTTGTTACAGATGTATTGAGTG
ATGATTGAGACTGGCTTCGAGGTCAAACACAGCAACCGGCCGTCAACCGA
ATACGATATGAATGCCTGACAACGCACCCTGCTGTCTTCTTTCGCATCTG
CCCCCCATCTGCATGCACGCTTGTTCATGATGGACCCTACGACGAACAAA
TTTTCAGTTTGGCAGGATGACGGATGGCCGTAGGCGCTAGCCGGGCAATT
GAATATGGAACGAGAGGGCGTGGGTGAAAGGTCGAGACGGCTTCGCAACT
TCCAGCACGGGTTTGTCGACGACCCATCGGGAGTCACCTTGATATCCGCA
TAAGCGCGGTGCTTCGTGCATGCGTTTGTCGAAGGAGCAGTTGAAGGTCA
ACCTCTACTCAAATGGCCGACACGTAGAGACAAGAGGACGGCGTAAAGGA
TGATGGGCCAGCTTGCCGGCGTCAAAGCAGTGTTATTGGACCGATGTACG
AAAGGAGACAATTGACGAGATTTCCCACATTTACCTGGACCGTTGTGCAC
CAGAGTGTCGAAGGCGATCCTTCGTAGAAAAATCCTACGACTAGCGGCAT
CGCAGAGACTTGGGGTCAAGGTCTGATGACCTCGATATTAAGCTCTAGTG
GGATGTGCGCTTGTCACACGTGCAACAGCACAATGTGGCCTTCGCTGGGA
GCCGTGCTCCCTTCTACGCGCTGGAATTTCGACTTTTGAGAAGTCTAACG
GCATGTCCGCCGTTGTCATTACAAGTAGGGTCAGGGACCTTCGCGTTACA
TAAGTTTCGCATGCCATAGCCTTATGGTGGAACTCCACTTCCCGTGTTGT
CGGATGTACGTCGTATAGAAGTGGGATAATTCTACCGAACGTTTGATGAC
GTGGTTGATCCGAAGAAACCTCCCTTGTATTTTTTAGTTTATACTTCGCA
CCACTTTTGCTGTAGCCCTCGAAAGCACCGGCTGCCTTACAGGCAGCTAT
GATTTGCATCGTGAGTTTCTGCCCAGACATATGTGTGCATGCATATTAAG
AAGCTTGACCGGGTGACTGTGTGTGCGTGAATCGTTGCGTTGCAAATATG
GGCAAAAATGCAACCATCTCGAGGACTGGGAAGATACGGC back to topCoding sequence (CDS) from alignment at Scaffold_618:940756..944295- >EsuBft882_9a-0001 ID=EsuBft882_9a-0001|Name=EsuBft882_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1905bp|location=Sequence derived from alignment at Scaffold_618:940756..944295- (Ectocarpus subulatus male Bft15b) ATGACTCTCCGCGAGCAGCTCCAAAAACTCGTTTCGCAGAAACTCGCCGC AAAGGGTGAGCTTGACCATGCCGGGCTTTTGGCTTTGGAAACGCTCAGCA AGATGGCACCGGAGGGCGAAGTGGATCCAGTTGGTGGATCATCTGCTGGT GGTGGTGCTAGTGTTGGTGTTGTTGACTCTCGTCCTAGGAGAATCCTCCC GCCTGGCATCGAGAAATTGACGAAATTTAGCGGCAAGGATCCTGGTGCTG TGTCCGACGTGCTCAACAGATTCCACTCCCTTGTCGTCGCGGCCCTGCCT GGCAGCTCGCCTGGCACAGTGAATAAGGCTCTGAACCGAGATGTCGTGTT TGTCTTGGAGGGTGCAGCCCTGAAGTTCTTCAAATTGCTGAAAGCAGGAC AGATAGAGTGGGAACCTACCCCGCCTCCCTCCCTCCAGCAGCGGGGGGCA GAGGCGGGAGCAGGGGGCGTTCAGCAACAACCAGGAAAGCCACCTTTCCG GCCCCCGTCGACCTGGGCTGAAGTCTACAATGCTTTCCACGACCACTATC TGCCGGCGGATGGCATCGCACGGACATCAGACACACTATTTTCACTTCGC CAAGCTGCAGACGAATCCGTCCCGACGTTGGTCCAGCGACAAATGGGCCT GACCAATCACTTGAGCCGGTTAATTGAAGCCAACGGGGGGCAGACAACTT TTTGGGAAGCAATCATGATACGGTTGTTCGAGAGAGCGCTCCGCGCCGAC CTGCAGCGGCTTCAGCACGCGGAGCCTCCGTGCCCGACTTTTCAGGAAAG TGTTGACCGTGCAGATCGTAACGCTCTAAGATTGGAGAAGGAGAAGAGTA AGAGAAGGAATGATGCTGGCGAAGGAGGTGGCGGTGGAGAGCGTCCGCCA GAGGACAATCGACTTCGCCTCGGCACGAAACCGCAGGGCGGCAGCAGTGG TGTGGGAGAGGGGAAGGGAGGGGTGCAAAGTTCAGATGGTTCGAAAGGAC CAGCGCTTGTCGGGTCTTCTTCATCGTTGGCCAGGGGTCCGCTGACCTTG TCGGGTACCTTTGAAGACGTGGCTCCTGTTGTAGGGGGCTTCCAGCCCCC ACACGGGAAGACAGAGAAAAAACTTGGTGGAGGAGGCGCAGGAGAGGGAC GTGAGGGTGATCGACTTCAGCACGGTAGTAAAACGCAGCGCAACAGTGAC GTAGGAGATGGGAAGGAACTGGTGCACGGCTGGGGTGGCTTGAAGGGGGC AGCGCATGCCCGGTCTCCTTCTGTGGTCAGGGGTCCGCTTACCGTGCCAG GTGACGTTGAAGGCGAAACTGTTGCTGTGGGGAGCTTCCAAACCGGACAC GGGAGAAGTGCAGACCGAAACGGCGGTGGAGACCGGGAAAGGGCCGAGAG CATCTTGTCTGACGATGAGTCCCGATCCACCCCTGCTTGGCAAGAAGAGC CGGAAGAACAAGTAGTGCCTGGAGGATCTGGGGAGTGGGGCGATGGTGGT GAGGTCAAACACGATCGCAGCCGTGGGTCGCGAGGCAAGAAGTCTCAAAA GCGAACGCGGGATTGGCAAGAAGACCAGGGCCGCAAGCGGGACAGGCAAG AAGACCAGACCCCTTCGCGGAACAAGCAAGAAGGCCATCATGCCCGTGCC CAGCGTCGTCCATCTCAGCCCCACCGGCGGCGGCAGCCAGTTCCCGACAA CGTACTGCCGTGTACCAATCCAGCGTGCAAGGCGAAGCGAAAAACTCATT CTTCGAACATCTGTTTTTACCACCCAGACCCGGCACAAGCTCTACGAAAC CGGATGAGAAGGAAAGACATATTCTTGAAGACCCATGCTATGGAGGACGC GGGTAACGATGCGGGTAGTGGGCTCCACAACAATTTCGACGAACCTGAGT TCTAG back to top
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