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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 40483.S8DHS9 |
| ProteomeId | EsuBft882_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 6 |
| Max annot lvl | 4751|Fungi |
| Length | 242 |
| Evalue | 4.58e-17 |
| EggNOG OGs | 2D1RE@1|root,2SIZV@2759|Eukaryota,3AFJR@33154|Opisthokonta,3PCBT@4751|Fungi,3V3W0@5204|Basidiomycota,226TY@155619|Agaricomycetes,3H14A@355688|Agaricomycetes incertae sedis |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft882_3a-0001 ID=EsuBft882_3a-0001|Name=EsuBft882_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2422bp|location=Sequence derived from alignment at Scaffold_618:877535..881083+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TGTTGTTGTGAAGACCGGCAACCGAATGGAGCTCGAGCAAGAGATGATCT CCGCCCTACGGCAGTCAGTTCCTGACGGACTCAAGCTGCGCAACACACTC AGCACCGATAGACAGAAGCCACGAAAGTACCGTGTAGTGCTGTGCGGGAA GATCGCGAGATGGGGCGGACGACGTGACGACGCCAGACGACCCTCTGGAT CGTTGGGGAGGGCTGCCCAGCGGGCGCGGGCGTTGACACTGCGCCAAGAG CTACAGGACGCCGTTCCTGGGGCGTTCAACCTGTCTGCCAGCAGCCTGGA AGAAGTCGTGCGGGCTTGGATAGAGTTCAAACCTGAGTGGGCCGAGGACG CGAAGGAGAAATATCTGAACAAGGGCACGTACAATACATCTCAAGCCGCG AAGAAGATTAGGCGTGCGAAAGGGGCGGAGATGAGAACCCAGTTGCTCGC GGCAGCGGCGGACGAGTTTCGCGCTGAGAGTGTCGAGACGCTCGACCTCG TCGTGAAGGATGCGGTGAAGTCGATCAGCGCAGCAGCAGAGATGGAAGAT GACACCAACGCGGCAGAGAGCGTTTTGTCCAACTACATGCTGGCGCACAT GGTCCAGGTGGCCATGACATTGATCCAGCTGTACACCCAGCAGCTCAACG GGGTCGACCGGGAGGATACACTGGCCATCGCAGCAGAGGTTGGACGGAGG AGTGTTCCAACAGTACAGCTGGGAGAGCGGGATTTCATCGCGCGCGGACG CATCAAGCCACCTGACACAGGTCGCTTCAAGCGCCGGTTTTTACTAGNCA TGACATTGATCCAGCTGTACACCCAGCAGCTCAACGGGGTCGACCGGGAG GATACACTGGCCATCGCAGCAGAGGTTGGACGGAGGAGTGTTCCAACAGT ACAGCTGGGAGAGCGGGATTTCATCGCGCGCGGACGCATCAAGCCACCTG ACACAGGTCGCTTCAAGCGCCGGTTTTTACTAGAACTCGACGAAGGCGTC TCGAGGCTCGCGAAAGGCTGGGCGCTCGAGAACTGCGGTATACTCAGCGG GCAAGCCAACAAGACGGCGGGGGATTCCCGCAAGTGGGTGAACAGCACCA TCATGCCGATGCTGGAGGCGCAACCCACGGAGGACTTCGACCCTTTCCAT GGATTGAGAATAAACCTGGGTCTATTCTTCGATGGCCACGACGACGAGAA GACCCTAGCGTACCGGCACGACGAGTTCCTGCCGGCGCTGTTAGAGACCC GCGACTACATGGAGGTGTGGATTCCAATGGGCAAAGAGGAAGCGGTCGCC TGGGGCATTGATGTTGATGCGGTGGGGGAGTCTGAGCGCTTGCCAGATTG TGGTGTCTGGGTTGGTGTCGATGATCTCGAGGCAGCGCTGGCAGACTTGC CCGCAGACCTGCAAGCCAGAGTGCAGAGCAAGAAAACCTACCCCGAAGGG AGGCGGGCCATGCTTCTCTACCAGGACGAAAGCATATTTCGAGCCAACGA CGACCAGAGTGTCGGGGACGATCATCCACAACCTCGGCTTCTTCTCGGCA TGGTGGGAACAGATCAAGGAGGCGGAGCGCAACCGCAGGAAACGATGCGC TGCCTCAGTTGCCGCGAAGCGGCGGGGGGAAACGTGAAAGTCGAGAAGTT CCGCCCTATCGACATGCTGCACAAAGACGAGCACGGACGGTACTGGTCCT ACCACCTCTTCGAGTACGGCAAGAACAAGGAGGGATACTTGACCGGGCTC AAGATGCTGGACCACATGGCAGATGTGCTCGACGTGTTCACAGTTCTCTA CCCTGAGCACAAGCCTGTAGGCCTGTTCGACTGGTCGTCCTGTCATGATT GCATGGAGGCCGGCGCACCGTCGGTGAAGAGAATGGACTTGGGCGTCGGT GGTGTGAGGAACGGAGAAGAGCTTGCGCCGATGGACCCCGTGACCATCCT CGAAGACACCCCGAACCTCCCAGCGGGCACGATACAGCACTTGACGTTCC GGAGGGGAGACGCCCCCCCCTTCCATTCCCCGCATCTCCGGCCGGCCGAG TATGTCGGAAAGCTGAAAGGAATGCGGCAGATCTTGTGTGAGAGGGGGCT CCTGGTCAAAGGCATGAGTAAGACCGGGGGCTCAGGCGACAAGAAGGACC TCAGCAAGAGCATGGAGCACGTTCTAGGAGAGCAGAAAGACTTTAAGGAA GTTGATTCTTGTCTGGTGCTATTATTGCAGCGCCACGGGGGGGCCTGTCT CATGCTTCCTAAGTACCACTGCGAGTGTAACCCCATCGAACTTGTTTGGG GACGGGCGAAGGACTGGACTTGCAAGAATTGCACGTATTCGTTGGAATGC TTGCGCAATAACGTGCCGCTAAGGTTCAGAGCAGAGAAGGGTAGGCAGGC TGTTCCGGTAGTCCAGGGCTAA back to topprotein sequence of EsuBft882_3a-0001 >EsuBft882_3 ID=EsuBft882_3|Name=EsuBft882_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=798bp
MELEQEMISALRQSVPDGLKLRNTLSTDRQKPRKYRVVLCGKIARWGGRR DDARRPSGSLGRAAQRARALTLRQELQDAVPGAFNLSASSLEEVVRAWIE FKPEWAEDAKEKYLNKGTYNTSQAAKKIRRAKGAEMRTQLLAAAADEFRA ESVETLDLVVKDAVKSISAAAEMEDDTNAAESVLSNYMLAHMVQVAMTLI QLYTQQLNGVDREDTLAIAAEVGRRSVPTVQLGERDFIARGRIKPPDTGR FKRRFLLXMTLIQLYTQQLNGVDREDTLAIAAEVGRRSVPTVQLGERDFI ARGRIKPPDTGRFKRRFLLELDEGVSRLAKGWALENCGILSGQANKTAGD SRKWVNSTIMPMLEAQPTEDFDPFHGLRINLGLFFDGHDDEKTLAYRHDE FLPALLETRDYMEVWIPMGKEEAVAWGIDVDAVGESERLPDCGVWVGVDD LEAALADLPADLQARVQSKKTYPEGRRAMLLYQDESIFRANDDQSVGDDH PQPRLLLGMVGTDQGGGAQPQETMRCLSCREAAGGNVKVEKFRPIDMLHK DEHGRYWSYHLFEYGKNKEGYLTGLKMLDHMADVLDVFTVLYPEHKPVGL FDWSSCHDCMEAGAPSVKRMDLGVGGVRNGEELAPMDPVTILEDTPNLPA GTIQHLTFRRGDAPPFHSPHLRPAEYVGKLKGMRQILCERGLLVKGMSKT GGSGDKKDLSKSMEHVLGEQKDFKEVDSCLVLLLQRHGGACLMLPKYHCE CNPIELVWGRAKDWTCKNCTYSLECLRNNVPLRFRAEKGRQAVPVVQG back to topmRNA from alignment at Scaffold_618:877535..881083+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft882_3a-0001 ID=EsuBft882_3a-0001|Name=EsuBft882_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3549bp|location=Sequence derived from alignment at Scaffold_618:877535..881083+ (Ectocarpus subulatus male Bft15b) TGTTGTTGTGAAGACCGGCAACCGAATGGAGCTCGAGCAAGAGATGATCT
CCGCCCTACGGCAGTCAGTTCCTGACGGACTCAAGCTGCGCAACACACTC
AGCACCGATAGACAGAAGCCACGAAAGTACCGTGTAGTGCTGTACGCGAG
GTCGGGCGACAGCAATGAGTTGAAATGGCGGAGCGGCTGGATCACGTCTG
GAAAGCCACGCGGCCGCGACGCCATCGCGGAGAGAAGCATCCTCGACAAT
GTTACTGCTATTGACTGGAAGACCCTTCAAAAAAAGAGCTCCGCGGGAGT
GCGTAGTTAGAACCGCAGCCCCGGCCATCTGTTCACTGCAAGAACCTGGT
CTTGCAGGTGCGGGAAGATCGCGAGATGGGGCGGACGACGTGACGACGCC
AGACGACCCTCTGGATCGTTGGGGAGGGCTGCCCAGCGGGCGCGGGCGTT
GACACTGCGCCAAGAGCTACAGGACGCCGTTCCTGGGGCGTTCAACCTGT
CTGCCAGCAGCCTGGAAGAAGTCGTGCGGGCTTGGATAGAGTTCAAACCT
GAGTGGGCCGAGGACGCGAAGGAGAAATATCTGAACAAGGGCACGTACAA
TACATCTCAAGCCGCGAAGAAGATTAGGCGTGCGAAAGGGGCGGAGATGA
GAACCCAGTTGCTCGCGGCAGCGGCGGACGAGTTTCGCGCTGAGAGTGTC
GAGACGCTCGACCTCGTCGTGAAGGATGCGGTGAAGTCGATCAGCGCAGC
AGCAGAGATGGAAGATGTGAGCAATTTACAGCGGCATTTATGATCAACGT
GTGAGTCTTTTCTTCTTCAGCTTGCCGTGCTCGAACCTGGGTCTACACTC
TGTGATATGCACTGCTGTTTTATTTGTCAACAGGGCTTGATTGGGGCGGA
GTTTGTAGGGCGCCACCACCCCCTCCGAGCTCCGGCTGCGACCGTCAGAG
TAATTTATTGACCAACCTGCATTCTCAGCTAAAAAAAATACACTCGAAAC
ACTGCTGTCAGAAACACTGCTGTCAGAACACTGCTGTCAAACAATTCGGC
TACTGAAAATAGAAAGATTTATTGCCGCCCTCGACACCCCCCCTTCGCGC
AGGACACCAACGCGGCAGAGAGCGTTTTGTCCAACTACATGCTGGCGCAC
ATGGTCCAGGTGGCCATGACATTGATCCAGCTGTACACCCAGCAGCTCAA
CGGGGTCGACCGGGAGGATACACTGGCCATCGCAGCAGAGGTTGGACGGA
GGAGTGTTCCAACAGTACAGCTGGGAGAGCGGGATTTCATCGCGCGCGGA
CGCATCAAGCCACCTGACACAGGTCGCTTCAAGCGCCGGTTTTTACTAGN
CATGACATTGATCCAGCTGTACACCCAGCAGCTCAACGGGGTCGACCGGG
AGGATACACTGGCCATCGCAGCAGAGGTTGGACGGAGGAGTGTTCCAACA
GTACAGCTGGGAGAGCGGGATTTCATCGCGCGCGGACGCATCAAGCCACC
TGACACAGGTCGCTTCAAGCGCCGGTTTTTACTAGAACTCGACGAAGGCG
TCTCGAGGCTCGCGAAAGGCTGGGCGCTCGAGAACTGCGGTATACTCAGC
GGGCAAGCCAACAAGACGGCGGGGGATTCCCGCAAGTGGGTGAACAGCAC
CATCATGCCGATGCTGGAGGCGCAACCCACGGAGGACTTCGACCCTTTCC
ATGGATTGAGAATAAACCTGGTGGAAGGGAAGGAGAACGAGCCGCCAAGG
CACCAAATCTCCCTTTCCACGGCAACAGAGTGGCTGAAGAAGATGGGATG
CGAATACCACGACGGCAAATAAGGGTCTATTCTTCGATGGCCACGACGAC
GAGAAGACCCTAGCGTACCGGCACGACGAGTTCCTGCCGGCGCTGTTAGA
GACCCGCGACTACATGGAGGTGTGGATTCCAATGGGCAAAGAGGAAGCGG
TCGCCTGGGGCATTGATGTTGATGCGGTGGGGGAGTCTGAGCGCTTGCCA
GNGGCAACAGAGTGGCTGAAGAAGATGGGATGCGAATACCACGACGGCAA
ATAAGGGTCTATTCTTCGATGGCCACGACGACGAGAAGACCCTAGCGTAC
CGGCACGACGAGTTCCTGCCGGCGCTGTTAGAGACCCGCGACTACATGGA
GGTGTGGATTCCAATGGGCAAAGAGGAAGCGGTCGCCTGGGGCATTGATG
TTGATGCGGTGGGGGAGTCTGAGCGCTTGCCAGATTGTGGTGTCTGGGTT
GGTGTCGATGATCTCGAGGCAGCGCTGGCAGACTTGCCCGCAGACCTGCA
AGCCAGAGTGCAGAGCAAGAAAACCTACCCCGAAGGGAGGCGGGCCATGC
TTCTCTACCAGGACGAAAGCATATTTCGAGGTTATTATATTTAATTTAAA
CAGAGAAAGTTGGCGCGACTTATTTGTAAATTTATTCCGGACGTGAATAG
TAATGTTGCACGCAATTCAATATATTTTCGGGGCTGTGACCACAGAGATG
TTCACAATGCCACACCCGCCGCCCATAATTATCGGTGTCCTTTTCGAATT
TGCAGCCAACGACGACCAGAGGTACGCGTGGTAGCGGGACGGCCAGCACG
TGCCCGTCAAGAAGTCACAAGGCCAGGGGATCATAGTGTCGGGGACGATC
ATCCACAACCTCGGCTTCTTCTCGGCATGGTGGGAACAGATCAAGGAGGC
GGAGCGCAACCGCAGGAAACGATGCGCTGCCTCAGTTGCCGCGAAGCGGC
GGGGGGAAACGTGAAAGTCGAGAAGTTCCGCCCTATCGACATGCTGCACA
AAGACGAGCACGGACGGTACTGGTCCTACCACCTCTTCGAGTACGGCAAG
AACAAGGAGGGATACTTGACCGGGCTCAAGATGCTGGACCACATGGCAGA
TGTGCTCGACGTGTTCACAGTTCTCTACCCTGAGCACAAGCCTGTAGGCC
TGTTCGACTGGTCGTCCTGTCATGATTGCATGGAGGCCGGCGCACCGTCG
GTGAAGAGAATGGACTTGGGCGTCGGTGGTGTGAGGAACGGAGAAGAGCT
TGCGCCGATGGACCCCGTGACCATCCTCGAAGACACCCCGAACCTCCCAG
CGGGCACGATACAGCACTTGACGTTCCGGAGGGGAGACGCCCCCCCCTTC
CATTCCCCGCATCTCCGGCCGGCCGAGTATGTCGGAAAGCTGAAAGGAAT
GCGGCAGATCTTGTGTGAGAGGGGGCTCCTGGTCAAAGGCATGAGTAAGA
CCGGGGGCTCAGGCGACAAGAAGGACCTCAGCAAGAGCATGGAGCACGTT
CTAGGAGAGCAGAAAGACTTTAAGGAAGTTGATTCTTGTCTGGTGCTATT
ATTGCAGCGCCACGGGGGGGCCTGTCTCATGCTTCCTAAGTACCACTGCG
AGTGTAACCCCATCGAACTTGTTTGGGGACGGGCGAAGGACTGGACTTGC
AAGAATTGCACGTATTCGTTGGAATGCTTGCGCAATAACGTGCCGCTAAG
GTTCAGAGCAGAGAAGGGTAGGCAGGCTGTTCCGGTAGTCCAGGGCTAA back to topCoding sequence (CDS) from alignment at Scaffold_618:877535..881083+ >EsuBft882_3a-0001 ID=EsuBft882_3a-0001|Name=EsuBft882_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2397bp|location=Sequence derived from alignment at Scaffold_618:877535..881083+ (Ectocarpus subulatus male Bft15b) ATGGAGCTCGAGCAAGAGATGATCTCCGCCCTACGGCAGTCAGTTCCTGA CGGACTCAAGCTGCGCAACACACTCAGCACCGATAGACAGAAGCCACGAA AGTACCGTGTAGTGCTGTGCGGGAAGATCGCGAGATGGGGCGGACGACGT GACGACGCCAGACGACCCTCTGGATCGTTGGGGAGGGCTGCCCAGCGGGC GCGGGCGTTGACACTGCGCCAAGAGCTACAGGACGCCGTTCCTGGGGCGT TCAACCTGTCTGCCAGCAGCCTGGAAGAAGTCGTGCGGGCTTGGATAGAG TTCAAACCTGAGTGGGCCGAGGACGCGAAGGAGAAATATCTGAACAAGGG CACGTACAATACATCTCAAGCCGCGAAGAAGATTAGGCGTGCGAAAGGGG CGGAGATGAGAACCCAGTTGCTCGCGGCAGCGGCGGACGAGTTTCGCGCT GAGAGTGTCGAGACGCTCGACCTCGTCGTGAAGGATGCGGTGAAGTCGAT CAGCGCAGCAGCAGAGATGGAAGATGACACCAACGCGGCAGAGAGCGTTT TGTCCAACTACATGCTGGCGCACATGGTCCAGGTGGCCATGACATTGATC CAGCTGTACACCCAGCAGCTCAACGGGGTCGACCGGGAGGATACACTGGC CATCGCAGCAGAGGTTGGACGGAGGAGTGTTCCAACAGTACAGCTGGGAG AGCGGGATTTCATCGCGCGCGGACGCATCAAGCCACCTGACACAGGTCGC TTCAAGCGCCGGTTTTTACTAGNCATGACATTGATCCAGCTGTACACCCA GCAGCTCAACGGGGTCGACCGGGAGGATACACTGGCCATCGCAGCAGAGG TTGGACGGAGGAGTGTTCCAACAGTACAGCTGGGAGAGCGGGATTTCATC GCGCGCGGACGCATCAAGCCACCTGACACAGGTCGCTTCAAGCGCCGGTT TTTACTAGAACTCGACGAAGGCGTCTCGAGGCTCGCGAAAGGCTGGGCGC TCGAGAACTGCGGTATACTCAGCGGGCAAGCCAACAAGACGGCGGGGGAT TCCCGCAAGTGGGTGAACAGCACCATCATGCCGATGCTGGAGGCGCAACC CACGGAGGACTTCGACCCTTTCCATGGATTGAGAATAAACCTGGGTCTAT TCTTCGATGGCCACGACGACGAGAAGACCCTAGCGTACCGGCACGACGAG TTCCTGCCGGCGCTGTTAGAGACCCGCGACTACATGGAGGTGTGGATTCC AATGGGCAAAGAGGAAGCGGTCGCCTGGGGCATTGATGTTGATGCGGTGG GGGAGTCTGAGCGCTTGCCAGATTGTGGTGTCTGGGTTGGTGTCGATGAT CTCGAGGCAGCGCTGGCAGACTTGCCCGCAGACCTGCAAGCCAGAGTGCA GAGCAAGAAAACCTACCCCGAAGGGAGGCGGGCCATGCTTCTCTACCAGG ACGAAAGCATATTTCGAGCCAACGACGACCAGAGTGTCGGGGACGATCAT CCACAACCTCGGCTTCTTCTCGGCATGGTGGGAACAGATCAAGGAGGCGG AGCGCAACCGCAGGAAACGATGCGCTGCCTCAGTTGCCGCGAAGCGGCGG GGGGAAACGTGAAAGTCGAGAAGTTCCGCCCTATCGACATGCTGCACAAA GACGAGCACGGACGGTACTGGTCCTACCACCTCTTCGAGTACGGCAAGAA CAAGGAGGGATACTTGACCGGGCTCAAGATGCTGGACCACATGGCAGATG TGCTCGACGTGTTCACAGTTCTCTACCCTGAGCACAAGCCTGTAGGCCTG TTCGACTGGTCGTCCTGTCATGATTGCATGGAGGCCGGCGCACCGTCGGT GAAGAGAATGGACTTGGGCGTCGGTGGTGTGAGGAACGGAGAAGAGCTTG CGCCGATGGACCCCGTGACCATCCTCGAAGACACCCCGAACCTCCCAGCG GGCACGATACAGCACTTGACGTTCCGGAGGGGAGACGCCCCCCCCTTCCA TTCCCCGCATCTCCGGCCGGCCGAGTATGTCGGAAAGCTGAAAGGAATGC GGCAGATCTTGTGTGAGAGGGGGCTCCTGGTCAAAGGCATGAGTAAGACC GGGGGCTCAGGCGACAAGAAGGACCTCAGCAAGAGCATGGAGCACGTTCT AGGAGAGCAGAAAGACTTTAAGGAAGTTGATTCTTGTCTGGTGCTATTAT TGCAGCGCCACGGGGGGGCCTGTCTCATGCTTCCTAAGTACCACTGCGAG TGTAACCCCATCGAACTTGTTTGGGGACGGGCGAAGGACTGGACTTGCAA GAATTGCACGTATTCGTTGGAATGCTTGCGCAATAACGTGCCGCTAAGGT TCAGAGCAGAGAAGGGTAGGCAGGCTGTTCCGGTAGTCCAGGGCTAA back to top
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