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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 112098.XP_008607020.1 |
| ProteomeId | EsuBft87_12 |
| Protein domains | CYTOPLASMIC_DOMAIN |
| Protein domains | TMhelix |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | IPR000086 |
| Protein domains | PTHR12992 |
| Protein domains | TRANSMEMBRANE |
| Protein domains | IPR015797 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | Uncharacterized protein C14C4.10c OS:Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN:SPAC14C4.10c PE:3 SV:1 [Automatic annotation] |
| Nb exon | 7 |
| Max annot lvl | 2759|Eukaryota |
| Length | 3094 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.56e-31 |
| EggNOG OGs | COG0494@1|root,KOG3069@2759|Eukaryota |
| Ec32 ortholog description | NUDIX hydrolase domain-like |
| Ec32 ortholog | Ec-11_006020.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| GOs | GO:0003674,GO:0003824,GO:0016787 |
| Description | CoA pyrophosphatase activity |
| COG category | L |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0003824 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft87_12a-0001 ID=EsuBft87_12a-0001|Name=EsuBft87_12a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3094bp|location=Sequence derived from alignment at Scaffold_508:291541..296739- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CCCAAGTCCCCCAGCGCCCCCGCCGCTCCCACAGCAGTGAAGGCGTGAAG GCAGGCCGTGTTTCAGATACTCTCGGCTGGTAATCTCGGCAAAAAGAGAG CACGTGTGTACGTCAGTAGAGCGGGCTTCCTTTCTTTCCTTCTCTTCGGC GACGATGGCGCCTAGGAACGACCTCGTGGATCGCTTGAGATCCTCCAGCA ACTTGAGGCAACCAACCCCAACAGAGGCAGCGTGGTTTAGTCTCCAAGCC CGCGACGGGAAGGGTAGTGTCCCAGCGGTCGATTCAGCTGCTCGTGCACC AGTGAGACCCAGATGCGCGTCTTTGTCTCTCATCCTCCGTGAGGTGGACG GCAAGGTGGAAATGTTGGTGATCAAGAGGGCCGCCAGTCTTAGAGACAAA TGGAGTGGGCACATCGCTTTACCGGGAGGGAGACAGGAGGCTGGAGAAAC TGAACTCCAGACGGCCGTGCGAGAATGCCAAGAGGAGGTTGGGATCTCCT TGATGTCTAGTCGTTTCGCTCTTCTGGGGAGACTCAAGGACTCCAAGACA AGCACCGGCAAAGACGCGCTCACAGTGTCTTGTTTCGTCTTCGTGCAGAC CGCCAAGTCGGATATACCCGTCACCATCCAGGAGTCAGAAGTGGCCTTCG CTTGGTGGGTGGACACAGCAATCTTCTTCCCCGACCCTACCCCGCGAGAG GTTGGCTTCGCTGTCACCAGCATGGTCAAGGCTGCGCGGAAGCCGCACTG GAAGGCGCTGACGTGGTTGTTCGGGGCAAATACCATCTTCTTTCCCTGCT TCTTCCTTCCTCCACCGTCGCTGTCGGGACAGCAGCAGTCTCTAGTTGAC GACTCCACGATTGACGTTCCAACCCCGGTGGAGTACCCCCTGGATGCGAA AACGTTTGTAATGTGGGGGCTGACGTTTGGTGTTGTTTCTGACCTCGTCG TGGCCGGTGGCGGGCGCGGGTTTGCCCACCACCAACCTCCGTACTTCCGG TTCCACAGCGTCCGGGCGGACTCAGTCGTAGATATGTGTTGCAGGATTTG GAGATGGCTCTGGAATCTCAGGCGGGCTCTTTCTTCTTCTTTCGCGACGT TGCGCCTTCGCCAGTGATGGTCTAGAAGCTTCTACGGAGACCACGCCAAA TTCATTGATTGTCCCGAAAGTCGTCGTGTGAAGCCAAGACGCTTTGGACA AATGGCCTCGTCCGCTCGACAAGATGGTGGGGTTGCAGCGATGATGCAGG CTGTACGATTGTTCAATCCTCAGGCCTTGGTACGCGTGAGCGTCTACGCC CCAGGAGGCACTAATCAACACAAACTTGCCGAGGGCGTGCAAGTTCGTGT CCAAGACGGCCGACGGAGGGATTTCTCACGCCGGGGTTAGGCAACAACAA GTGCATGGTTCGGAGTTCCGGACTGAACAGCATCGGAAAAGACGCTTTTG TTGTGGGGCGGTAAAACGCCGAGAATAGAAACTTTGTATCGGCTTCTTGG AGGAACTCCCAGTGAAACAATCAGCAGCGCACTAGCGATTTGAAAGTTTG GTGGCGTGCCGAGAATTCACGCAACACACAATGCGTGTCGTAGTCGTTGC ATGATTCAATCGAGGCAGGTAGAGCAGTTCAACACCAGTAAAACAAATGT AATTAGATATGATAGCGGTGGTTTGTGGCTTGACCTACATTGCTTTGCCA AGAAACACAAAGGACACGCACAAGCTGACACACGACCTTAAAAAAAAAGC ACTTCTCACGACAACCCCGTTGCACCCGCATCGAGTAAAGAACTAACGCA ATACACAGGACTACAGCAATTGAACAAAAATGGGGTGGTGATTTTTTCCA GATTCACGACGCTCGAAGACACCCCCTCGCTTTGTACTCTCTTTGTACTC TCGCTGCTCTTCACAACATCACCGAACTCTAGCCATATATGGCGTCAAAA GGCCGATGACTCGAGAATCGGCGACAGTATGACGGAAACTACGGACACAC GTGGTGTTGTCAAGAGTGCAAATATACGGTTAAGCTCCAGCTAACATAGC ATAACACAACACACACACACGATCTTTCGGCCGCGAGCCCAAACTCGACA TATTCTTACGACTAGGATCCGTTAGAAAGTCCCGCAAACCTCATCCCGTG GATCTCATCTTGTCCGAAAGCTCCATGCGCCCTACGATAACACGCGGTGA ACGGTCCAAAGTGTGCTGTTGCATCCCTCCCCTCTTGCACTGCTGTCACA AAACAAACAACGTTTGCGGCATTCGGCCGTTTTGATGCCTATGAAAGCTA AGCGTTGTCTCCCAACCCGCACGTGTAACCATCAACTGCAGAACCTGAGG GTTAAGACATGTACCGGTTCCATGGCGCCGCCAAAAGCCCAATCCCGCAA AACGCCTCTCAGCTGCCTTCTGCACCCAGTCGCCTTCATCCTAGCCAGCG TCGCACACAATCAGTCGAAGCAGCAAGTGGTGGAGAATCCTTACCCTTCC AACAAGCGCCATGACCCCTCTCACACGCGAAGGCCCCAGCATCACGTTTC CTTGGTTCCATACGAACGCCTGCGAGCATGCTCTCCTGTGTCTCTCCTTT CATCCAGATAATGAGGTGTTGAAAGGGGGGGTTCAACTTCCCTGTCTATC AGCGTACACTGGCTCCTTCACGCGTGCAGTACCAGCGCAAGTTGCGTCTT ACAAAAATCTCCCGTGCTACAGGGGGCCCGAAGAGCACACCGCGCCTCCA TATATAGTATACCTTGAGCCGCGTCTGCCTCGTCCCAGCGCAGCAGCTCG CTCTCAGTCGAGCTTCAACACTCCTTCAGGCCCAATGCCTCCATCTATGC AGAGAGTGAAGCCTCCAGTTCTGATGCGCGACTATGTAGCATGCCCGCCC CCCGTGCTCGCTGATGCCAAAAGCACTTCTCAGGTCGCGTGAGAGTGCCT TCCAGCATTTGACGGGTCCACCATCGGCGGTGCACTTTCACGGAACCCCC CCCCGCCACCCGGGGGTGGGGTCGTTGCCATCCCCGCTCCCGGCATAGGC CTTGTCCGAAGTCGCATGTTCGCGTTCACCGGCCCCGGTCGCCC back to topprotein sequence of EsuBft87_12a-0001 >EsuBft87_12 ID=EsuBft87_12|Name=EsuBft87_12a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=320bp
MAPRNDLVDRLRSSSNLRQPTPTEAAWFSLQARDGKGSVPAVDSAARAPV RPRCASLSLILREVDGKVEMLVIKRAASLRDKWSGHIALPGGRQEAGETE LQTAVRECQEEVGISLMSSRFALLGRLKDSKTSTGKDALTVSCFVFVQTA KSDIPVTIQESEVAFAWWVDTAIFFPDPTPREVGFAVTSMVKAARKPHWK ALTWLFGANTIFFPCFFLPPPSLSGQQQSLVDDSTIDVPTPVEYPLDAKT FVMWGLTFGVVSDLVVAGGGRGFAHHQPPYFRFHSVRADSVVDMCCRIWR WLWNLRRALSSSFATLRLRQ back to topmRNA from alignment at Scaffold_508:291541..296739- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft87_12a-0001 ID=EsuBft87_12a-0001|Name=EsuBft87_12a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5199bp|location=Sequence derived from alignment at Scaffold_508:291541..296739- (Ectocarpus subulatus male Bft15b) CCCAAGTCCCCCAGCGCCCCCGCCGCTCCCACAGCAGTGAAGGCGTGAAG
GCAGGCCGTGTTTCAGATACTCTCGGCTGGTAATCTCGGCAAAAAGAGAG
CACGTGTGTACGTCAGTAGAGCGGGCTTCCTTTCTTTCCTTCTCTTCGGC
GACGATGGCGCCTAGGAACGACCTCGTGGATCGCTTGAGATCCTCCAGCA
ACTTGAGGCAACCAACCCCAACAGAGGCAGCGTGGTTTAGTCTCCAAGCC
CGCGACGGGAAGGGTAGTGTCCCAGCGGTCGATTCAGCTGCTCGTGCACC
AGTGAGACCCAGATGCGCGTCTTTGTCTCTCATCCTCCGTGAGGTGGACG
GCAAGGTGGAAATGTTGGTGATCAAGAGGGCCGCCAGTCTTAGGTGAGAA
ACATAGCATACAACACGCGGGGTTGGTTGTCGCGTATTTCTGCGTACCGG
TACATGGTTGGAAGCGGAACCCTGCACAGCAGTCGACCGCCAGAGTGTTC
TTGCCGTAATCAAAGAGCGACATCTGTCTATCTCGTACTTGCTCCACTCG
CTTTTTCGTTCTTTTCGCTCTCACTCGCCCTGTGTATATCTCCGCCCTTT
GGCACCCTACATGATTACTTTGTTCGGGGACTCCCTGTTCGAGCGCCGGC
CAATCCCCTCTCCAACACCATGCTTGCTGATGTGCTCTCTGATGGACTAC
TTCTTGGCCCCTGGCAGAGACAAATGGAGTGGGCACATCGCTTTACCGGG
AGGGAGACAGGAGGCTGGAGAAACTGAACTCCAGACGGCCGTGCGAGAAT
GCCAAGAGGAGGTTGGGATCTCCTTGATGTCTAGGTATCACAATACCAAC
TTGTTTTCGAAGTGATTTCCGTGTTGATGTTGTGACAACCCAGAAGAGAG
TTGACCTCGTCGCATGAGGTTTGCGCTATATTTGCTCCCCACAAAAACAC
TAGCCGCCCTGAAGATATTGTCCACTGCCTTCACCTCGAATGAGGCTTGC
GCTGCATATGCGCTCCACTAAATACAGCAGTAATAGTCGCCCTGAAGATA
CCGTCTTCTGACTTCCTATTGCTCGCATGTACATCTTGTTTGTGTCTTGT
CCCATTTCCGTCTGACACCGTGCATGCAGTCGTTTCGCTCTTCTGGGGAG
ACTCAAGGACTCCAAGACAAGCACCGGCAAAGACGCGCTCACAGTGTCTT
GTTTCGGTGAGATATGCAAGTGGTTCCTCACGAAATACTTGTTAGTGTCC
AAGTCGTCTATGGTGCCGCTTGCGCGTACCAACCAGGCGGCTGAGAAGTA
AAGTTCCTTGGGACGTATCTTTTGGACCGTCAGTATCATTGCATCGCTCG
CAGGGCAGGGGCAGCAGCGGGGAGTGTACGTGAGGGAAGCGAGATGGGTG
AAGCAAGGCGCCTGCTGCCCCTCCCTTGGAGGAAATTGTAAGCAATGCTG
AACGGGTGTTTTTGTACCGCCAAGATGAAGAAGGATTGGGTCAACCGAGG
CACATTCGGTGCCCTGCATATCATGGTCAAGTTTTGTGAGCCGTATTCGT
CGACACTGCAGTCTAGGCATTTCCTCTGTTCACGGATGGTGTACGGTGAA
AGTGATGCGCTGCATCAACCCAGTGCACTTGCTTCGGTTTTAACTCCATG
ATCAATGGATGGTATTCGTATGTGTCCGCCTCCCCCTACCCTGCGCCCTC
CGCAGTCTTCGTGCAGACCGCCAAGTCGGATATACCCGTCACCATCCAGG
AGTCAGAAGTGGCCTTCGCTTGGTGAGAAATACACAGGAAGAGGAAAGCC
AGAAACGTAGAAAAGAAAGAGGTTCGACTTTTCAGTCACTTGATGGGTTG
GCCGGTTTCTTGTCCCGAGACCGTGTTCGTGCTGTGTCGTGGTGTCGGTG
CCTGGCGGGTTTGTGCATACACGTTTGCTCCTGGGCTCAACCGATTCCCA
CTCTGACTGTGTATGTCCCACCTGCAGGTGGGTGGACACAGCAATCTTCT
TCCCCGACCCTACCCCGCGAGAGGTTGGCTTCGCTGTCACCAGCATGGTC
AAGGCTGCGCGGAAGCCGCACTGGAAGGTGAGAAGACGATACGGATTGCA
TCTGCGGTTTGCAATATTATTTAGCCAAGGCGTTGATGTGTTCTTCTTTT
GTTCACCAATGTTCGAAGCGTTTTGCGGGGCGTTTTTTTTTTGCCATTAC
GCTGCTTTTGGATCTGTATGCACAAAGCGATCTGCCCTGTGCGGAAAGGC
GCTGATGGCGTGACTGTTGGGCGTACATAGTCCGTTCGTCCCCTGCTTGT
TCCTTCCTTCAATTCCACTGTCATGATTGTTGTTGTTGTTGTTGTCTTCA
CATTAAAAACCATCCCGGTCTCTCTATCCAGTACCTCCTTCTGTCTCAAT
CTCTCCGTACTAATCCATCACTTGACTCGGCCAATTTCCATGATAGTCTT
TACTTAACGTGTCTGAGACTGATTGTGCGAATGTGACTACGGCACTACTG
TTGTGACTCGTTCACGCATGCGTGCTTGGTGGAACACGCGATCAAACGTC
GGTTGCTCGCCCCCCCCCAACAGCAGCCTTCCAAACGTTCGTTCACCTTG
TTCTGTCCCTAAAGGCGCTGACGTGGTTGTTCGGGGCAAATACCATCTTC
TTTCCCTGCTTCTTCCTTCCTCCACCGTCGCTGTCGGGACAGCAGCAGTC
TCTAGTTGACGACTCCACGATTGACGTTCCAACCCCGGTGGAGTACCCCC
TGGATGCGAAAACGTTTGTAATGTGGGGGCTGACGTTTGGTGTTGTTTCT
GACCTCGTCGTGGCCGGTGGCGGGCGCGGGTTTGCCCACCACCAACCTCC
GTACTTCCGGTCAGTGTCCAAACAAGTTTGATCATGTTGTTTCATCCTGA
CTGCCGCTTCTGCCGTACCGAACCGTAGCCGAGTTTCTGTCGATGCAGAC
TTTTCGATTCTCCATGCCAGTTTTGGGCTTCATCGACTAGAGAATGAACC
TGTGGGTTCTTCGTGAAGCGCCAACGCGTTACAGCAGTAGAAACACAAAA
ACTTGTGCACATGATGACGGACACGTTGTTTCTTTGTCCATTGTGTGGCT
GCAGGTTCCACAGCGTCCGGGCGGACTCAGTCGTAGATATGTGTTGCAGG
ATTTGGAGATGGCTCTGGAATCTCAGGCGGGCTCTTTCTTCTTCTTTCGC
GACGTTGCGCCTTCGCCAGTGATGGTCTAGAAGCTTCTACGGAGACCACG
CCAAATTCATTGATTGTCCCGAAAGTCGTCGTGTGAAGCCAAGACGCTTT
GGACAAATGGCCTCGTCCGCTCGACAAGATGGTGGGGTTGCAGCGATGAT
GCAGGCTGTACGATTGTTCAATCCTCAGGCCTTGGTACGCGTGAGCGTCT
ACGCCCCAGGAGGCACTAATCAACACAAACTTGCCGAGGGCGTGCAAGTT
CGTGTCCAAGACGGCCGACGGAGGGATTTCTCACGCCGGGGTTAGGCAAC
AACAAGTGCATGGTTCGGAGTTCCGGACTGAACAGCATCGGAAAAGACGC
TTTTGTTGTGGGGCGGTAAAACGCCGAGAATAGAAACTTTGTATCGGCTT
CTTGGAGGAACTCCCAGTGAAACAATCAGCAGCGCACTAGCGATTTGAAA
GTTTGGTGGCGTGCCGAGAATTCACGCAACACACAATGCGTGTCGTAGTC
GTTGCATGATTCAATCGAGGCAGGTAGAGCAGTTCAACACCAGTAAAACA
AATGTAATTAGATATGATAGCGGTGGTTTGTGGCTTGACCTACATTGCTT
TGCCAAGAAACACAAAGGACACGCACAAGCTGACACACGACCTTAAAAAA
AAAGCACTTCTCACGACAACCCCGTTGCACCCGCATCGAGTAAAGAACTA
ACGCAATACACAGGACTACAGCAATTGAACAAAAATGGGGTGGTGATTTT
TTCCAGATTCACGACGCTCGAAGACACCCCCTCGCTTTGTACTCTCTTTG
TACTCTCGCTGCTCTTCACAACATCACCGAACTCTAGCCATATATGGCGT
CAAAAGGCCGATGACTCGAGAATCGGCGACAGTATGACGGAAACTACGGA
CACACGTGGTGTTGTCAAGAGTGCAAATATACGGTTAAGCTCCAGCTAAC
ATAGCATAACACAACACACACACACGATCTTTCGGCCGCGAGCCCAAACT
CGACATATTCTTACGACTAGGATCCGTTAGAAAGTCCCGCAAACCTCATC
CCGTGGATCTCATCTTGTCCGAAAGCTCCATGCGCCCTACGATAACACGC
GGTGAACGGTCCAAAGTGTGCTGTTGCATCCCTCCCCTCTTGCACTGCTG
TCACAAAACAAACAACGTTTGCGGCATTCGGCCGTTTTGATGCCTATGAA
AGCTAAGCGTTGTCTCCCAACCCGCACGTGTAACCATCAACTGCAGAACC
TGAGGGTTAAGACATGTACCGGTTCCATGGCGCCGCCAAAAGCCCAATCC
CGCAAAACGCCTCTCAGCTGCCTTCTGCACCCAGTCGCCTTCATCCTAGC
CAGCGTCGCACACAATCAGTCGAAGCAGCAAGTGGTGGAGAATCCTTACC
CTTCCAACAAGCGCCATGACCCCTCTCACACGCGAAGGCCCCAGCATCAC
GTTTCCTTGGTTCCATACGAACGCCTGCGAGCATGCTCTCCTGTGTCTCT
CCTTTCATCCAGATAATGAGGTGTTGAAAGGGGGGGTTCAACTTCCCTGT
CTATCAGCGTACACTGGCTCCTTCACGCGTGCAGTACCAGCGCAAGTTGC
GTCTTACAAAAATCTCCCGTGCTACAGGGGGCCCGAAGAGCACACCGCGC
CTCCATATATAGTATACCTTGAGCCGCGTCTGCCTCGTCCCAGCGCAGCA
GCTCGCTCTCAGTCGAGCTTCAACACTCCTTCAGGCCCAATGCCTCCATC
TATGCAGAGAGTGAAGCCTCCAGTTCTGATGCGCGACTATGTAGCATGCC
CGCCCCCCGTGCTCGCTGATGCCAAAAGCACTTCTCAGGTCGCGTGAGAG
TGCCTTCCAGCATTTGACGGGTCCACCATCGGCGGTGCACTTTCACGGAA
CCCCCCCCCGCCACCCGGGGGTGGGGTCGTTGCCATCCCCGCTCCCGGCA
TAGGCCTTGTCCGAAGTCGCATGTTCGCGTTCACCGGCCCCGGTCGCCC back to topCoding sequence (CDS) from alignment at Scaffold_508:291541..296739- >EsuBft87_12a-0001 ID=EsuBft87_12a-0001|Name=EsuBft87_12a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=963bp|location=Sequence derived from alignment at Scaffold_508:291541..296739- (Ectocarpus subulatus male Bft15b) ATGGCGCCTAGGAACGACCTCGTGGATCGCTTGAGATCCTCCAGCAACTT GAGGCAACCAACCCCAACAGAGGCAGCGTGGTTTAGTCTCCAAGCCCGCG ACGGGAAGGGTAGTGTCCCAGCGGTCGATTCAGCTGCTCGTGCACCAGTG AGACCCAGATGCGCGTCTTTGTCTCTCATCCTCCGTGAGGTGGACGGCAA GGTGGAAATGTTGGTGATCAAGAGGGCCGCCAGTCTTAGAGACAAATGGA GTGGGCACATCGCTTTACCGGGAGGGAGACAGGAGGCTGGAGAAACTGAA CTCCAGACGGCCGTGCGAGAATGCCAAGAGGAGGTTGGGATCTCCTTGAT GTCTAGTCGTTTCGCTCTTCTGGGGAGACTCAAGGACTCCAAGACAAGCA CCGGCAAAGACGCGCTCACAGTGTCTTGTTTCGTCTTCGTGCAGACCGCC AAGTCGGATATACCCGTCACCATCCAGGAGTCAGAAGTGGCCTTCGCTTG GTGGGTGGACACAGCAATCTTCTTCCCCGACCCTACCCCGCGAGAGGTTG GCTTCGCTGTCACCAGCATGGTCAAGGCTGCGCGGAAGCCGCACTGGAAG GCGCTGACGTGGTTGTTCGGGGCAAATACCATCTTCTTTCCCTGCTTCTT CCTTCCTCCACCGTCGCTGTCGGGACAGCAGCAGTCTCTAGTTGACGACT CCACGATTGACGTTCCAACCCCGGTGGAGTACCCCCTGGATGCGAAAACG TTTGTAATGTGGGGGCTGACGTTTGGTGTTGTTTCTGACCTCGTCGTGGC CGGTGGCGGGCGCGGGTTTGCCCACCACCAACCTCCGTACTTCCGGTTCC ACAGCGTCCGGGCGGACTCAGTCGTAGATATGTGTTGCAGGATTTGGAGA TGGCTCTGGAATCTCAGGCGGGCTCTTTCTTCTTCTTTCGCGACGTTGCG CCTTCGCCAGTGA back to top
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