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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft879_4 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 4 |
| Length | 193 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-10_002740.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft879_4a-0001 ID=EsuBft879_4a-0001|Name=EsuBft879_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1930bp|location=Sequence derived from alignment at Scaffold_1199:42152..47143- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TCCTGTGCGGAGCACACACACGGAGCGGCCCCGCCCCCGGATGGAACCCA GAGGAACGACGGAGAGAAAGGGAGGAGGGTATAGCTGGGCAGAAGATGAC GACCACGCTCGTGTGCTGCTAGCACTCCACCTAGAGCTGTTAGCCTACGG ATTGAATGTTCATCACCGGGGTGATTCGCCCGCCGTACGCATGGAGCAGA GTAACGCCGGGGCTTTCCCGCCCATGCGCTACGTCGACGGCGGTGGCGGG GGTCGGGTGATAACCATCCATGCTTTGGCGATGTTCGACGACCTCATCGT GAGCGGGACTGCGGTGGCCACAGGAGGAAGGGATGGAGGAAGAGATAGTC GTGGTGGCGACGCCGTTCATCGGAGAACAACCTTCAGCGTTTCCGAGTGG TCTCCACAGCTGCTGCTGTCATCAACCTCAAGGGATCAGCAGCAGCAGTC TGGGGGGGTTCCTAAGGGCCAGCCTCAGCAGCAGGTGCAGCTCAAGGAGG GACAGCAGAACGCGGAGGGATCTTCATCGGGGGGCACACAATCAGGCGAC CAATGCCCGACTGCAACCAAGCATCCGCACCTGCCCGAGCGACAAGCTTC GCCGCCGGGTGACGGCGACAACGACGGCCGCGAGACTGGGAAGGGCACCC TGGAATCTTCGTCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAA CGGCGGCGACAACGTCGACCCTCCCTCGTGGGGGGGGGGCAAGAGGCCTT CCGGTCGAGAGTCGTGTCCGGCCTGCTGCTGCACCTCTGCCCTCCGCCCG GGCACTTCGCGGATCTACTCGGCTGTGGGGACGAGCTGCTTCGGCACGTC CTTGGGATGCTCGGGGCGCGGGATCTGGCCATGGTTGGCCTGACCGGGCG GGCAGCTGCCGTTAGCGTGGCGGCCGACTGTCTCTGGGCGAAGCTTGTGG CGGCCGATTTTTCCGAGCGCGAACAGCACGCCGTCCTTTTCCTTCAGCCA CCGCCGCCGCGGTCGCCGTCGCCGCCGCTTGACGCTGCTGAAAACGCCAC AGCGGCGGCGGCGGCGTCCGAGGGAGGCTGCCGCGGCGGTGGCGGCGGCA GCGGCGGCAGAAAGTGCGGTGGTGGCAATGAGGGTGCCTCCCGCCGGCTG TACGCCAAGCTCTCCGCCGCCCGCGCACGCCAAGCCGCCCAGGCGGCGGA ACGGCTGCGGCGCTCGAGCGTCCTCGAGATGGCAGCGCTGGGCCGCCTTG GCAGGGCATGGGGCCTGTATCCCTGGGCCCCGTACCTCCCCCGCGGGCCG TTCCACACCCACGGAGCCCCCCCCTCCCCGGAGTACGGCCTTTTGGATTC GCTGGGTGGGGACGGAACGGGGCCGGGCTTGGCACTCCCGCTGCCGCCGT CGCCGCCGTCGTCTTCTAGGTGGCGGTCTGGCTGGCACAGCACTTTTGGC GCGCGGGGTGGGGGCGGTGGGGGCTGGGGAGGCGGTGGCGGTTGGCTGTT CTCCGGGGGTAGGAGAGGGGGGGGGTTCGGGGCGGGTTGGGCGGCGAATC AGGCGGGCGTGCCATCCTACCGGCGCGGAGGCCGTGGCGCGTGGGGGTGA ATCACTGCGGCGGCGGCCGATTTTTTTTTTTCCTTGGTGTGGCGGTCTGT AACGGCCCGCGCGTTTGTGTGCCAGGCGGTGCTGCCTAGTCGCCGCGGGT GTGAATTGTCTAGTCTCGGTACTTTATTTTGTTTTCTTTTGCTGCCCAGG TCTTTCGGGGCGTGTTTGTTTTTTGCCGGAGGTGTTTTTGCTGTGGTTGA GATATGCGCGAAGGGCTTTGCGGGTGTTTGGGTGGCGGGGCGAACTGAAA TGTTGCCATGCTTACGACCGCCGATTGCTGTGCGCTACAGAGGTTGGTTT CGCGCGAGAGACGTCTTTGTACTGGGGCGG back to topprotein sequence of EsuBft879_4a-0001 >EsuBft879_4 ID=EsuBft879_4|Name=EsuBft879_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=519bp
MEPRGTTERKGGGYSWAEDDDHARVLLALHLELLAYGLNVHHRGDSPAVR MEQSNAGAFPPMRYVDGGGGGRVITIHALAMFDDLIVSGTAVATGGRDGG RDSRGGDAVHRRTTFSVSEWSPQLLLSSTSRDQQQQSGGVPKGQPQQQVQ LKEGQQNAEGSSSGGTQSGDQCPTATKHPHLPERQASPPGDGDNDGRETG KGTLESSSQQQQQQQQQQQQRRRQRRPSLVGGGQEAFRSRVVSGLLLHLC PPPGHFADLLGCGDELLRHVLGMLGARDLAMVGLTGRAAAVSVAADCLWA KLVAADFSEREQHAVLFLQPPPPRSPSPPLDAAENATAAAAASEGGCRGG GGGSGGRKCGGGNEGASRRLYAKLSAARARQAAQAAERLRRSSVLEMAAL GRLGRAWGLYPWAPYLPRGPFHTHGAPPSPEYGLLDSLGGDGTGPGLALP LPPSPPSSSRWRSGWHSTFGARGGGGGGWGGGGGWLFSGGRRGGGFGAGW AANQAGVPSYRRGGRGAWG back to topmRNA from alignment at Scaffold_1199:42152..47143- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft879_4a-0001 ID=EsuBft879_4a-0001|Name=EsuBft879_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4992bp|location=Sequence derived from alignment at Scaffold_1199:42152..47143- (Ectocarpus subulatus male Bft15b) TCCTGTGCGGAGCACACACACGGAGCGGCCCCGCCCCCGGATGGAACCCA
GAGGAACGACGGAGAGAAAGGGAGGAGGGTATAGCTGGGCAGAAGATGAC
GACCACGCTCGTGTGCTGCTAGCACTCCACCTAGAGCTGTTAGCCTACGG
ATTGAATGTTCATCACCGGGGTGATTCGCCCGCCGTACGCATGGAGCAGA
GTAACGCCGGGGCTTTCCCGCCCATGCGCTACGTCGACGGCGGTGGCGGG
GGTCGGGTGATAACCATCCATGCTTTGGCGATGTTCGACGACCTCATCGT
GAGCGGGACTGCGGTGGCCACAGGAGGAAGGGATGGAGGAAGAGATAGTC
GTGGTGGCGACGCCGTTCATCGGAGAACAACCTTCAGCGTTTCCGAGTGG
TCTCCACAGCTGCTGCTGTCATCAACCTCAAGGGATCAGCAGCAGCAGTC
TGGGGGGGTTCCTAAGGGCCAGCCTCAGCAGCAGGTGCAGCTCAAGGAGG
GACAGCAGGTGAAGACACTATGCTGCTACATAGCCTCGTATTCCACCAGA
GAGCCAGCTTTCCCACCTCAGTTTGCTGAACCCCCAACAAACAGCCGAAC
GAGCTCTGCAGATCATCGGGGATCGTGTGTGATGGTTGTAACGTCCATTC
AGCGGACCTCCAGCATGACACACCTTTGGTACGTTCATGCTCAAACTAGA
GCGTTAGGTGAGCTCTGCATACACGAGGATAGCTTCACCCACGTGCGTGC
GGAAGCAAGTGCCCATCACACGGCAAGGCTGGAGCGCTTCAGCAGTTGCC
CCGCAGTCTAGACCGCTGTTCCTGTGTGGGTGTGCCTTTGCAAGCGATGA
GTCGAGACTACAGCCGTACAGCACTACAGCAGTAGATTGATGTATTCTAC
ANGCTCTTGGATACCTTTTTCTTGCTACGTGTGCGTGTTCTTTAGATCCT
CAGATGGCTCTAGCTCTTTCGTGACCACGGGCTGAGAGTCTTTGCTAGAT
TTTGGCATTTAGCAACTGGCATACGGTTTAATGTGAAGTCAACAACAACA
ACAACAACAACAACATGCACACATAAGGTGCGTGCTTGCTTCATCTGCTC
TACAGCAGTGGCAGTGGCTGTTATTGGTTTGACGCCTTCCGCGATTCGAT
CGCGTTGTCACAATGTAGGAGGAACTCTCTGTTTGGTGTCGCCTTCCTTG
CATTGGGGCTGCTGGTGGTGGCACAGGGTATGCACGAGCAGGCTTACGGC
CGTTTTCTCTCCTGGAGTACGTGTTTTCGGACGCTGCTGACCCGGCCGTC
GACCCGCTCATCGCGCCATCCATACACGGCCGCATGTATCTGGAAGGCAT
GACGCGCCTTCCATAATCAGGCGTGTTTTTTTTTTTGGCATGACGCTCAC
TCTTAGAACAGCTCCTGCTTGCTGCACACAGCGATAAATACCGTATATGA
CACAATATAACACACCCCCTGGACCGATTTTCAAAGCTCGATTACTCCAC
GACGAAGAAGATGCATAAACGAAATGATACATTTTCGAAAAGCTCTCGAC
GAGACGGTTTTAACGCCGCCGTTCTCGGCGCTGTGACTGTTCCTGCAGTT
GAGAAATCGAGCTTCGAAAATCGGTCAAGGGTGTGTGTTATCTTGTGTCA
TATACGGTAGCAGTAGCTCGGGTCCCAATTACACGACGTCAACAGGATGT
ACGTGCAAGTTGGCGCACTAAACCTGTGTTTTGGGGACGATTCATTGGCG
CTCCTTTCACCACTTCGCAACCGTATGTTGAAGTTCAGAACCCACAGCTT
CAAGAACGTTGGAGTTTTTGTCCAAGCAGAAGTCAAGCCCCACGGCTTAC
TTCAAGTACCTGGGCAGCTTCGAGAGAAGCCGATTTCAAACCATTCGACG
AGGCAGCTGGCTCCTTTTCAAGTTTGATTTCCCCTTCTAGAATATACTCC
GTAGGTCCCAAGAGCTAGGAAGGTGATCGCCTGCCGACATGCTGCCAATT
GCTATGGCGCAAAGTTGCGGGGCATGGTGAGTTGCTTGCGAATGCCGTAG
GCTTTAGCTGCCTGCTGTGAGGGTCTTCTGCTGATTTTCGATCGCAGCTT
AGAAGTTCAGAGGGGTTTCGGAGCAGCATCATGGTGTGCATGCCTCACGC
TAGCTTTCTGTCCTGCTTCTTTGTTTTGCATGGCGAACCAACGCGTCTGA
TAACGTGGGGACCAGGAAACGAGGGTTCCCTTTACATCACACAACCCGAA
GCCATACCCGCGGTACACACGAAACCCCCCATGATCACCGCAGATGAGTG
TGAAGCGCTGGTTGTCTCCAAATAATAGCGTTCATTCCCCTCAATCTGAA
AGCGTCCAATATTTTTTGATTGGGATATTTGTTTTTGGCAAGACTGGACC
TTGCGTGCTGCATCGGGGTTTCGGGTCGCGCCGCCGCCGCCGCCCCCGTC
TCGTTTGTGCCTTCGCATGCCTGGGAGAGGGGGAGCGGACGACCCCGCTC
ATAAGATACCAGCTCACAACATGAGTGAGCTCCTCCCTTTCAGGCGCACC
AGCAGTACAGGACGATGCAAGCCTCCTTTAGAGCATTTAAGTTTTCCCTC
GCCATTCTTGGGGCGATCCATTCGTTCGAGAAGCATGGCTACACGTTCGT
GATATGCATAGGTAAGATAGATGGTTGGATGCTTGACAAGCCGGTTCACC
GCCCCATTTCCATGCGTACCTGACCCCAAGCAGAACGCGGAGGGATCTTC
ATCGGGGGGCACACAATCAGGCGACCAATGCCCGACTGCAACCAAGCATC
CGCACCTGCCCGAGCGACAAGCTTCGCCGCCGGGTGACGGCGACAACGAC
GGCCGCGAGACTGGGAAGGGCACCCTGGAATCTTCGTCGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAACGGCGGCGACAACGTCGACCCTCCC
TCGTGGGGGGGGGGCAAGAGGCCTTCCGGTCGAGAGTCGTGTCCGGCCTG
CTGCTGCACCTCTGCCCTCCGCCCGGGCACTTCGCGGATCTACTCGGCTG
TGGGGACGAGCTGCTTCGGCACGTCCTTGGGATGCTCGGGGCGCGGGATC
TGGCCATGGTTGGCCTGGTGAGAAAAGGGGGGTCGTTCAAGTCGTGCATG
CCGTAGTTGGGGGGGGGGTGTACTCATAGTCGTGCATGCCGTAGTCGTTA
GACCATTGACCTCGCATCCCTACAAAGCCGGGACGGGGCAAGCCGGGTTC
TCACCGAACCATTGCCTTAGACCATCGACCACGAGGACGGAGCATTGTTC
CCACAGGACCAATCGCAGATGATGGCCAATCGTCCCTTCCGATGGGGCGG
GGCAGGATTAGAGGGAGACAGAAACGAAGGAGAAAGCGGTGGACTGCGGA
CGGACGGGTGGACACAAGGCTGTATAGGTCACCGCTGTCATTGTGGTGCC
GTAGTTGGCCGCTACATGGTGGTTGACCCTTCGTTGGACTCTGCTATGTA
GGACCGAACAATACTTGGTCCCGGGGACGATGGTGCCGAGAGCTCTTGCC
CGCCTTCACGCGATGAAGACCCAAAACACAGCTCTCAGTATCTGCTGTGC
TTCGACGGCTGTTACTCGCCTCCGCTCTAACCACTGAGGCATGCAAGACA
TGAGTCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNN
NNNACGACCCCCCCCCCCCCCCCCCCCCCTCGCTCGCTCTGGTTCCCTTC
TCTTCGCTTTCGCAGACCGGGCGGGCAGCTGCCGTTAGCGTGGCGGCCGA
CTGTCTCTGGGCGAAGCTTGTGGCGGCCGATTTTTCCGAGCGCGAACAGC
ACGCCGTCCTTTTCCTTCAGCCACCGCCGCCGCGGTCGCCGTCGCCGCCG
CTTGACGCTGCTGAAAACGCCACAGCGGCGGCGGCGGCGTCCGAGGGAGG
CTGCCGGTGTGACGGTGATGTAGGTTGTGGCGGCGAATCGCCGGCGGCGG
CTGGGGGTCTGGCGGCGGAAGCGGGGGGGGGGGCTCCTTGCGCAAGCTCG
CGAGCCAACGGCTGCANGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGCTCCTTGCGCAAGCTCGCGAGCCAACGGCTGCAGCGGCG
GTGGCGGCGGCAGCGGCGGCAGAAAGTGCGGTGGTGGCAATGAGGGTGCC
TCCCGCCGGCTGTACGCCAAGCTCTCCGCCGCCCGCGCACGCCAAGCCGC
CCAGGCGGCGGAACGGCTGCGGCGCTCGAGCGTCCTCGAGATGGCAGCGC
TGGGCCGCCTTGGCAGGGCATGGGGCCTGTATCCCTGGGCCCCGTACCTC
CCCCGCGGGCCGTTCCACACCCACGGAGCCCCCCCCTCCCCGGAGTACGG
CCTTTTGGATTCGCTGGGTGGGGACGGAACGGGGCCGGGCTTGGCACTCC
CGCTGCCGCCGTCGCCGCCGTCGTCTTCTAGGTGGCGGTCTGGCTGGCAC
AGCACTTTTGGCGCGCGGGGTGGGGGCGGTGGGGGCTGGGGAGGCGGTGG
CGGTTGGCTGTTCTCCGGGGGTAGGAGAGGGGGGGGGTTCGGGGCGGGTT
GGGCGGCGAATCAGGCGGGCGTGCCATCCTACCGGCGCGGAGGCCGTGGC
GCGTGGGGGTGAATCACTGCGGCGGCGGCCGATTTTTTTTTTTCCTTGGT
GTGGCGGTCTGTAACGGCCCGCGCGTTTGTGTGCCAGGCGGTGCTGCCTA
GTCGCCGCGGGTGTGAATTGTCTAGTCTCGGTACTTTATTTTGTTTTCTT
TTGCTGCCCAGGTCTTTCGGGGCGTGTTTGTTTTTTGCCGGAGGTGTTTT
TGCTGTGGTTGAGATATGCGCGAAGGGCTTTGCGGGTGTTTGGGTGGCGG
GGCGAACTGAAATGTTGCCATGCTTACGACCGCCGATTGCTGTGCGCTAC
AGAGGTTGGTTTCGCGCGAGAGACGTCTTTGTACTGGGGCGG back to topCoding sequence (CDS) from alignment at Scaffold_1199:42152..47143- >EsuBft879_4a-0001 ID=EsuBft879_4a-0001|Name=EsuBft879_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1560bp|location=Sequence derived from alignment at Scaffold_1199:42152..47143- (Ectocarpus subulatus male Bft15b) ATGGAACCCAGAGGAACGACGGAGAGAAAGGGAGGAGGGTATAGCTGGGC AGAAGATGACGACCACGCTCGTGTGCTGCTAGCACTCCACCTAGAGCTGT TAGCCTACGGATTGAATGTTCATCACCGGGGTGATTCGCCCGCCGTACGC ATGGAGCAGAGTAACGCCGGGGCTTTCCCGCCCATGCGCTACGTCGACGG CGGTGGCGGGGGTCGGGTGATAACCATCCATGCTTTGGCGATGTTCGACG ACCTCATCGTGAGCGGGACTGCGGTGGCCACAGGAGGAAGGGATGGAGGA AGAGATAGTCGTGGTGGCGACGCCGTTCATCGGAGAACAACCTTCAGCGT TTCCGAGTGGTCTCCACAGCTGCTGCTGTCATCAACCTCAAGGGATCAGC AGCAGCAGTCTGGGGGGGTTCCTAAGGGCCAGCCTCAGCAGCAGGTGCAG CTCAAGGAGGGACAGCAGAACGCGGAGGGATCTTCATCGGGGGGCACACA ATCAGGCGACCAATGCCCGACTGCAACCAAGCATCCGCACCTGCCCGAGC GACAAGCTTCGCCGCCGGGTGACGGCGACAACGACGGCCGCGAGACTGGG AAGGGCACCCTGGAATCTTCGTCGCAGCAGCAGCAGCAGCAGCAGCAGCA GCAGCAGCAACGGCGGCGACAACGTCGACCCTCCCTCGTGGGGGGGGGGC AAGAGGCCTTCCGGTCGAGAGTCGTGTCCGGCCTGCTGCTGCACCTCTGC CCTCCGCCCGGGCACTTCGCGGATCTACTCGGCTGTGGGGACGAGCTGCT TCGGCACGTCCTTGGGATGCTCGGGGCGCGGGATCTGGCCATGGTTGGCC TGACCGGGCGGGCAGCTGCCGTTAGCGTGGCGGCCGACTGTCTCTGGGCG AAGCTTGTGGCGGCCGATTTTTCCGAGCGCGAACAGCACGCCGTCCTTTT CCTTCAGCCACCGCCGCCGCGGTCGCCGTCGCCGCCGCTTGACGCTGCTG AAAACGCCACAGCGGCGGCGGCGGCGTCCGAGGGAGGCTGCCGCGGCGGT GGCGGCGGCAGCGGCGGCAGAAAGTGCGGTGGTGGCAATGAGGGTGCCTC CCGCCGGCTGTACGCCAAGCTCTCCGCCGCCCGCGCACGCCAAGCCGCCC AGGCGGCGGAACGGCTGCGGCGCTCGAGCGTCCTCGAGATGGCAGCGCTG GGCCGCCTTGGCAGGGCATGGGGCCTGTATCCCTGGGCCCCGTACCTCCC CCGCGGGCCGTTCCACACCCACGGAGCCCCCCCCTCCCCGGAGTACGGCC TTTTGGATTCGCTGGGTGGGGACGGAACGGGGCCGGGCTTGGCACTCCCG CTGCCGCCGTCGCCGCCGTCGTCTTCTAGGTGGCGGTCTGGCTGGCACAG CACTTTTGGCGCGCGGGGTGGGGGCGGTGGGGGCTGGGGAGGCGGTGGCG GTTGGCTGTTCTCCGGGGGTAGGAGAGGGGGGGGGTTCGGGGCGGGTTGG GCGGCGAATCAGGCGGGCGTGCCATCCTACCGGCGCGGAGGCCGTGGCGC GTGGGGGTGA back to top
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