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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft879_11 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 438 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft879_11a-0001 ID=EsuBft879_11a-0001|Name=EsuBft879_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4384bp|location=Sequence derived from alignment at Scaffold_1199:106845..111626- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCTGTTGCGTCAGCACCAATCTATAGACACGCTGACGCAAGTGGTGAC GACACAGGCCAAGACCATCGCGACCCTGGTGTCCCTGGTGGGAGCAGGAG CAGGAGCAGGAGCAGGGAGGGACGCAGCAGCGACGGCGGCAGCGGCGGCG GCAGCGGTCGCCAACGGCGGTGGCGGCGACAGCGGCAGCGGCAGCGGTTC CACCGCCCGTCGAGAGAGCAGTAGCGCGCCGCCGAACGTGGCAGACGCGG AGGCGATTGCTGAGATGGTCGCTTACCTCGATGACGACGTACAGTCCTCG ACTAACCTATGCAGGGCGGGGGGGGAAGGCGGCGGCGGGGTACTCACGTA AACGCATGCCGTAGTCGTTAGACCATTGACCTCGCAGCCTTACAACGCCG GGACGGAGGAGCGACATGCGGCCGGGGTTTCGTGTGTGTGGGGGGGGTTG TTAAACATACACGAGTTTTCGAAGACACGGAAAGGGTGTGTGTTTATTTT GTTTCTTTTAATTGGCGTCGGGCGCGCGAACCGACTGACCCACATGAAAA TGCGTCAGTGTCGTTTCAGCGGGCGAGGCCAATACCGTAAAATTTTGTTT TTTTTTTGTGTGCCTTGGATCCCTGGGGGGTAGAGCCTAGTATATCTGAT CTTCTTCTTGCAAGCTTGAGTGGTCGTTGTTTGTTGCGAGTATACTCATG TCGGAGAAAAGAAGTGGGTTCGGAAAAACACGTGCGTTGTTTTGTGGTCG GGGCGGCGAATGTGCGTGGTGTGGTGTCTGTCGACTTGGGTGGGTTGTTA GCGCTGCTTGGATGGTTTGCTGCGAAGCTGCTGCTGCCGCCACCGCCGCC GTCGCCAGTGCACTCGTTGCGTTTCGTGAGTGAGCGCGGCTCTTCTTCTC GGCCGCGGTGGATGAGCTTGACAACACTACCACCAGTAAAAAATGATCGT TGCGTTCTTCTTTTTTTATTTATTTTCATCCGAAACCAAATATTTTTCCG TCACTTTTTTGCTGTCCATACGGTTTTATTTGTTTCTGATTCTTTTGTTT TCTTGTATTTTATCGCTCTGCTAACCCTTGGGGTCCATTTTATTTTGGTA ATACCTTGTCTAGGTTTTTGCTGTTTTTATGCTGTGTGCTGTCGTCGTCG CTGAGCCGCGCGTGTGCATTCCCCCCCCCCCCCCCACAGTCTTGAGGACG CGCGGCTGACTGCGAGTGTGTGAAGGGTTAGGGCCCCTCTGGCTCTTGGT CTTTTGTTTCCGCTGCGGTAGTCTAGAGGAGGAGATAGATCCGTTGGCGT TTATTCTCACTCTCCAGGAACATGTTGTTGATCGATTTTTTAGTAATGCC TTTCTGTCGTTTCCCCAATCGTGTGTGTCTTCGATGGTATCATATTGGTA TTCGTCAGAGGCGATCCGAGTGGGGGGCGATTGAAGTCTTTTGCTGTTGG TTTTCCACCTTTTTTTGTTAAGATGTTCTTTGCCCTCTATTGTTTGGTTG TTTGGTTTGTGGCATGGCATGGCTTTGTTTTTGTTTTTTTTGTGGAATGG CACGGTGTGCCCTGCCATGTCATGAGATGGGGTGGATCGCTGTTTGGGGG GGTGGGTTCCTTTTGCAGAAAATGTATGCATTCGCAAACCCACCATGATA ATATGGTTCTCAGGGGGAGGGTGTGTGTTGAAGTCTTCGCGGCGAAGGTA CAGAACTGGCTCAGATCTTTACCCGAGATGGGACGGAGGACTTGATTATT TGTGAGCTTGTTTTTTGCATCAACGCTCAGGCTTTTGCTGGTGATTTTGA GTGTCGGTGGCTACATGCCTGTGCGAGGGGGGGGAGGGGTTCGCCTAAAG ATTAGAGCGTCAGCATTTGAACAGCCTGCTTGCGATTGCCACAGGTCCGC TGCTGGCCTTGCTCTCCTCGATTATTCGCGTGATACATGTAGTAACAGTC CGGAAAGGGCTGGAGGCAACAACGGTCCCACACATGGTTAGTTGGTTTTG TATGTCGTCGAAATTATGCTGGCTGTTGGCGCCATGGGTGCTTGTTTTAC TAGTATTTATGTTTTGTTGTCTTCCTCTTGCCGTGTGAGTTACTTCAGAG AGAAACAAGCAAAGTTGCCAAGGAGGCGCCTTTCTACCGGCCCCCGTTGA CACGTGTTGTAAATCGACCACGTTCGGGTGCGGGCGTTGAAGTCTTGCAA ACAGCAGGAGTGCAGACAAAAGGACGCTTTTGTAGAAGTCATTAGCGTGG GCATGGCCGGGAGGAAGAAACTCTCCGTGCCACTTGCCAAGGGTTTATAG GGAGGGGGGGCGCGGGTTACGCCATGGGGGTTCTGGAGGGGGCGAGCATT CGCTTTGACCTGAATTGAGAGTGGTTCGGATGGGGGGTTATATGTTGGGG CGGGGGGGAGGGAACACGGCCGCACCGCGTAAATCCCGTTTAAGGTTGGA GCATCTCTACCACATTATTTTTTTCTTATAGTGGAGGTATTGTTCTTTTA ATTGGCAGGGGGTTGCAAGACTCACCCGGGGCTCGTTTGAAGCCCGCAAC GTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NCCCGCCGCCCCCGCCGCGGCCGCGGCCGCGAGGAAGGGGGTCTGGCTGA TAGTTGTATACAGCAGAAGCAGCATTCGATCGCCTTCCCGAAACGAAACG AACTCGATGGTTGAGAGAGACGCTTTGGTTTTTCGAGGAGGGGGGGGAAG GTGCAATATGCCGAAAAAACGGCGGGGTACCAAAAAGTGCTGTCCCTCCT GACGGAACTTGTAAGGTGCCAGGGTGGTGTCATCAGGCTACATAAGGTTA TTCCGCAGAGGGGGAGGTGGGTACGTCTAGGTGGCAGCGCTGCCGCCGCG GCCACATCGCTCCTACCTTCTGCGTGTAGGTTTGCATGGCGTGAGAGGGA TTACCGCAAAAGGAAGTCCTGAGTATTGTTCCAAAATTCGTGTAGTACGT GCGTACGAGGATTGTCTAAAAGCTTGCTTGGTTGTTGGAAACAGAACGAA CCCCACGGGCATTCAGAAAAGCAGCAATGCCGCCGGGGATCGGGCCAACC AATCATCCGTCAAAGGCTTGTCACTGCTGTGTGAGTCTCGTGCATGTTTT CGTCCCATGCGGGCGCCATTCCCTCCACGCCATTCATTCGGTGTACATGA GTATAACGTTTGACGCACCACCAGCTGGTGGGGGGGGGGGCACACGGAAG GTATCTAGAACTTTCCCTATTTTTTTGTCACCTCATTCATTCATTTGTTG TCCTGGACGCACCAGGGCCACCAGCCTGGGTTGCACAGGAGGAAGGCTTG GAGTTTTTGTCGTTCGCTTTTTTGTTTTTTGTTCTCCCTTTTCAAGAAGG GTGACGGATACCGTTACATTCTTTCCCCGCCGCCCCCGTGTTGGACGGAC TTTGTGACCCACGGGGAGGGACTCAAGATTTCTTACCCTTGTAACCCATG GGAGGGACTCAAGATGCCTCTATGCTACGATGTAGATAGAATACGCGCGT GCTGGTGTTGCTTCCGACGTGCAACATCGGAAGAAAAGCCGTAGGTACCC CCCCATGGACGCTAATTAATGTCCATTGGGGCTATCCCTCCTCTTAGCAG CGGCCAAGAATACAAGGAAGGTCAAGAAAGGCAGAGTGTTTCTCGCCATT GTATACACGCGCCTCCGCACTACTAGATGGCCATCCTCTCACACGGCGGA ACAGGAAAAAACAAAGCAACACACGTGAAATAATCTCGACACTATTTCTT TCGTTGGTCTCCGAGGGGAGAACGACCAACAGATTCAGTCCAACCACCCA ACAACAAGAATCAAGAGCCAGGAAGACACATACCAGCACGTGTTATATTC GAGGGCGACGACCACCCACCGCCAAAGCCGAAACAGTGCTTCCTTAGATA TACAAGCTGCCGAGACCCCTCTCCCCGCCCTCTACTATTAGGAAACAAAA TATCTCCACTCGGCGTTTTCGCCGAACCTGAGTTACACCACACCTTCGAC TTTTTGTCCTGTATACTCGACGCTTTTTCTGTTCACAGTTTTTTTCGTGG AGATGCGCGTGCGCGAGAGATAAGACCGTCGCAACACCTCTCTCCGTCAT CCTCACCAGGGACAACGGGAGTTTGAGCAAAAGTCGCTGATGACATTTTC TAAAACGAAAGACTTCAAACAAGACAGCCGTGTCGAAGTAGGGCGTTTGG CTCAGGAAGCAAAGATCATCACCCCCCCCCCCCC back to topprotein sequence of EsuBft879_11a-0001 >EsuBft879_11 ID=EsuBft879_11|Name=EsuBft879_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=116bp
MLLRQHQSIDTLTQVVTTQAKTIATLVSLVGAGAGAGAGRDAAATAAAAA AAVANGGGGDSGSGSGSTARRESSSAPPNVADAEAIAEMVAYLDDDVQSS TNLCRAGGEGGGGVLT back to topmRNA from alignment at Scaffold_1199:106845..111626- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft879_11a-0001 ID=EsuBft879_11a-0001|Name=EsuBft879_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4782bp|location=Sequence derived from alignment at Scaffold_1199:106845..111626- (Ectocarpus subulatus male Bft15b) ATGCTGTTGCGTCAGCACCAATCTATAGACACGCTGACGCAAGTGGTGAC
GACACAGGCCAAGACCATCGCGACCCTGGTGTCCCTGGTGGGAGCAGGAG
CAGGAGCAGGAGCAGGGAGGGACGCAGCAGCGACGGCGGCAGCGGCGGCG
GCAGCGGTCGCCAACGGCGGTGGCGGCGACAGCGGCAGCGGCAGCGGTTC
CACCGCCCGTCGAGAGAGCAGTAGCGCGCCGCCGAACGTGGCAGACGCGG
AGGCGATTGCTGAGATGGTCGCTTACCTCGATGACGACGTACAGTCCTCG
ACTAACCTATGCAGGGCGGGGGGGGAAGGCGGCGGCGGGGTACTCACGTA
AACGCATGCCGTAGTCGTTAGACCATTGACCTCGCAGCCTTACAACGCCG
GGACGGAGGAGCGACATGCGGCCGGGGTTTCGTGTGTGTGGGGGGGGTTG
TTAAACATACACGAGTTTTCGAAGACACGGAAAGGGTGTGTGTTTATTTT
GTTTCTTTTAATTGGCGTCGGGCGCGCGAACCGACTGACCCACATGAAAA
TGCGTCAGTGTCGTTTCAGCGGGCGAGGCCAATACCGTAAAATTTTGTTT
TTTTTTTGTGTGCCTTGGATCCCTGGGGGGTAGAGCCTAGTATATCTGAT
CTTCTTCTTGCAAGCTTGAGTGGTCGTTGTTTGTTGCGAGTATACTCATG
TCGGAGAAAAGAAGTGGGTTCGGAAAAACACGTGCGTTGTTTTGTGGTCG
GGGCGGCGAATGTGCGTGGTGTGGTGTCTGTCGACTTGGGTGGGTTGTTA
GCGCTGCTTGGATGGTTTGCTGCGAAGCTGCTGCTGCCGCCACCGCCGCC
GTCGCCAGTGCACTCGTTGCGTTTCGTGAGTGAGCGCGGCTCTTCTTCTC
GGCCGCGGTGGATGAGCTTGACAACACTACCACCAGTAAAAAATGATCGT
TGCGTTCTTCTTTTTTTATTTATTTTCATCCGAAACCAAATATTTTTCCG
TCACTTTTTTGCTGTCCATACGGTTTTATTTGTTTCTGATTCTTTTGTTT
TCTTGTATTTTATCGCTCTGCTAACCCTTGGGGTCCATTTTATTTTGGTA
ATACCTTGTCTAGGTACGTTAGCCTGTGACCACGGAAATTGACCGAGTCA
AGTGCTGGATTAGTACGGAGAGATTGAGACAAAAGGAGGTACTGGATAGA
GAGACCGGGATGGTTTTTAATGTGAAGACAACAACGGTTCCACCGGCGGT
CAGCCGCGCTGCCGAAAGTGTTACATATCCTTTCGCGTCTGATGTGGGGC
TCGCTCTTTTTTGTGTGGTAGGTTTTTGCTGTTTTTATGCTGTGTGCTGT
CGTCGTCGCTGAGCCGCGCGTGTGCATTCCCCCCCCCCCCCCCACAGTCT
TGAGGACGCGCGGCTGACTGCGAGTGTGTGAAGGGTTAGGGCCCCTCTGG
CTCTTGGTCTTTTGTTTCCGCTGCGGTAGTCTAGAGGAGGAGATAGATCC
GTTGGCGTTTATTCTCACTCTCCAGGAACATGTTGTTGATCGATTTTTTA
GTAATGCCTTTCTGTCGTTTCCCCAATCGTGTGTGTCTTCGATGGTATCA
TATTGGTATTCGTCAGAGGCGATCCGAGTGGGGGGCGATTGAAGTCTTTT
GCTGTTGGTTTTCCACCTTTTTTTGTTAAGATGTTCTTTGCCCTCTATTG
TTTGGTTGTTTGGTTTGTGGCATGGCATGGCTTTGTTTTTGTTTTTTTTG
TGGAATGGCACGGTGTGCCCTGCCATGTCATGAGATGGGGTGGATCGCTG
TTTGGGGGGGTGGGTTCCTTTTGCAGAAAATGTATGCATTCGCAAACCCA
CCATGATAATATGGTTCTCAGGGGGAGGGTGTGTGTTGAAGTCTTCGCGG
CGAAGGTACAGAACTGGCTCAGATCTTTACCCGAGATGGGACGGAGGACT
TGATTATTTGTGAGCTTGTTTTTTGCATCAACGCTCAGGCTTTTGCTGGT
GATTTTGAGTGTCGGTGGCTACATGCCTGTGCGAGGGGGGGGAGGGGTTC
GCCTAAAGATTAGAGCGTCAGCATTTGAACAGCCTGCTTGCGATTGCCAC
AGGTCCGCTGCTGGCCTTGCTCTCCTCGATTATTCGCGTGATACATGTAG
TAACAGTCCGGAAAGGGCTGGAGGCAACAACGGTCCCACACATGGTTAGT
TGGTTTTGTATGTCGTCGAAATTATGCTGGCTGTTGGCGCCATGGGTGCT
TGTTTTACTAGTATTTATGTTTTGTTGTCTTCCTCTTGCCGTGTGAGTTA
CTTCAGAGAGAAACAAGCAAAGTTGCCAAGGAGGCGCCTTTCTACCGGCC
CCCGTTGACACGTGTTGTAAATCGACCACGTTCGGGTGCGGGCGTTGAAG
TCTTGCAAACAGCAGGAGTGCAGACAAAAGGACGCTTTTGTAGAAGTCAT
TAGCGTGGGCATGGCCGGGAGGAAGAAACTCTCCGTGCCACTTGCCAAGG
GTTTATAGGGAGGGGGGGCGCGGGTTACGCCATGGGGGTTCTGGAGGGGG
CGAGCATTCGCTTTGACCTGAATTGAGAGTGGTTCGGATGGGGGGTTATA
TGTTGGGGCGGGGGGGAGGGAACACGGCCGCACCGCGTAAATCCCGTTTA
AGGTTGGAGCATCTCTACCACATTATTTTTTTCTTATAGTGGAGGTATTG
TTCTTTTAATTGGCAGGGGGTTGCAAGACTCACCCGGGGCTCGTTTGAAG
CCCGCAACGTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCCCGCCGCCCCCGCCGCGGCCGCGGCCGCGAGGAAGGGGGT
CTGGCTGATAGTTGTATACAGCAGAAGCAGCATTCGATCGCCTTCCCGAA
ACGAAACGAACTCGATGGTTGAGAGAGACGCTTTGGTTTTTCGAGGAGGG
GGGGGAAGGTGCAATATGCCGAAAAAACGGCGGGGTACCAAAAAGTGCTG
TCCCTCCTGACGGAACTTGTAAGGTGCCAGGGTGGTGTCATCAGGCTACA
TAAGGTTATTCCGCAGAGGGGGAGGTGGGTACGTCTAGGTGGCAGCGCTG
CCGCCGCGGCCACATCGCTCCTACCTTCTGCGTGTAGGTTTGCATGGCGT
GAGAGGGATTACCGCAAAAGGAAGTCCTGAGTATTGTTCCAAAATTCGTG
TAGTACGTGCGTACGAGGATTGTCTAAAAGCTTGCTTGGTTGTTGGAAAC
AGAACGAACCCCACGGGCATTCAGAAAAGCAGCAATGCCGCCGGGGATCG
GGCCAACCAATCATCCGTCAAAGGCTTGTCACTGCTGTGTGAGTCTCGTG
CATGTTTTCGTCCCATGCGGGCGCCATTCCCTCCACGCCATTCATTCGGT
GTACATGAGTATAACGTTTGACGCACCACCAGCTGGTGGGGGGGGGGGCA
CACGGAAGGTATCTAGAACTTTCCCTATTTTTTTGTCACCTCATTCATTC
ATTTGTTGTCCTGGACGCACCAGGGCCACCAGCCTGGGTTGCACAGGAGG
AAGGCTTGGAGTTTTTGTCGTTCGCTTTTTTGTTTTTTGTTCTCCCTTTT
CAAGAAGGGTGACGGATACCGTTACATTCTTTCCCCGCCGCCCCCGTGTT
GGTACGTCACGTTTCGAGACGCGTCAAGAAGCGCATACATCCAGTGGGGG
GAGGGGGGCAGGGCAAAAAGTCGTCATACGCCCCATGTCCAACGGCCACT
CTCTTCCCACATCGTTTCCGTCCATCTGCAGCGTGTCGATGCCACACATC
ATCCGCCATCATCAAGCAAGGGAGGAATCGGGCGCTTGCAGGACGGACTT
TGTGACCCACGGGGAGGGACTCAAGATTTCTTACCCTTGTAACCCATGGG
AGGGACTCAAGATGCCTCTATGCTACGATGTAGATAGAATACGCGCGTGC
TGGTGTTGCTTCCGACGTGCAACATCGGAAGAAAAGCCGTAGGTACCCCC
CCATGGACGCTAATTAATGTCCATTGGGGCTATCCCTCCTCTTAGCAGCG
GCCAAGAATACAAGGAAGGTCAAGAAAGGCAGAGTGTTTCTCGCCATTGT
ATACACGCGCCTCCGCACTACTAGATGGCCATCCTCTCACACGGCGGAAC
AGGAAAAAACAAAGCAACACACGTGAAATAATCTCGACACTATTTCTTTC
GTTGGTCTCCGAGGGGAGAACGACCAACAGATTCAGTCCAACCACCCAAC
AACAAGAATCAAGAGCCAGGAAGACACATACCAGCACGTGTTATATTCGA
GGGCGACGACCACCCACCGCCAAAGCCGAAACAGTGCTTCCTTAGATATA
CAAGCTGCCGAGACCCCTCTCCCCGCCCTCTACTATTAGGAAACAAAATA
TCTCCACTCGGCGTTTTCGCCGAACCTGAGTTACACCACACCTTCGACTT
TTTGTCCTGTATACTCGACGCTTTTTCTGTTCACAGTTTTTTTCGTGGAG
ATGCGCGTGCGCGAGAGATAAGACCGTCGCAACACCTCTCTCCGTCATCC
TCACCAGGGACAACGGGAGTTTGAGCAAAAGTCGCTGATGACATTTTCTA
AAACGAAAGACTTCAAACAAGACAGCCGTGTCGAAGTAGGGCGTTTGGCT
CAGGAAGCAAAGATCATCACCCCCCCCCCCCC back to topCoding sequence (CDS) from alignment at Scaffold_1199:106845..111626- >EsuBft879_11a-0001 ID=EsuBft879_11a-0001|Name=EsuBft879_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=351bp|location=Sequence derived from alignment at Scaffold_1199:106845..111626- (Ectocarpus subulatus male Bft15b) ATGCTGTTGCGTCAGCACCAATCTATAGACACGCTGACGCAAGTGGTGAC GACACAGGCCAAGACCATCGCGACCCTGGTGTCCCTGGTGGGAGCAGGAG CAGGAGCAGGAGCAGGGAGGGACGCAGCAGCGACGGCGGCAGCGGCGGCG GCAGCGGTCGCCAACGGCGGTGGCGGCGACAGCGGCAGCGGCAGCGGTTC CACCGCCCGTCGAGAGAGCAGTAGCGCGCCGCCGAACGTGGCAGACGCGG AGGCGATTGCTGAGATGGTCGCTTACCTCGATGACGACGTACAGTCCTCG ACTAACCTATGCAGGGCGGGGGGGGAAGGCGGCGGCGGGGTACTCACGTA A back to top
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