Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft877_9 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 199 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft877_9a-0001 ID=EsuBft877_9a-0001|Name=EsuBft877_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1998bp|location=Sequence derived from alignment at Scaffold_103:210760..216247+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGACTCTTTCGGCCATCCGCTGGTCCCTCCGGGCTGCTGCTGCTGGTG
CCGCCGCCAGCCATCCTGTGGCACACAACAACCTACTCCTCTCTCTGTCC
CTACTCGGCCCAGGATGAACTCTCCTAGAAGAAGAAGCACCCGTGCGGAG
GGCGTCCGCTTCAGGCCGCCGGCATGGGCTTGACCGCCTCTGCGGTGAGC
GACGCCTGCTGCACGCGCAAGCCTGCCCCTGCCTGCTGAGGCCTGCAAAT
ACTGTGGGACGATGAGGGGTCTTCATCGTAGAGAGGCCGGACCGACGAGT
TCGTGTTCCAAGCCTGGGCATCGAGCAATGTCAAGACACGTCTGAAGATG
GGCGGCAAGACGTTCGTCGCAGGCGTTTCCTCGCGGACGTCTTCGCGAAG
TGCTTCACCACGTTGCGTTGGCTACGACAGCGCATCATCGAAGGGTGTGT
GCCGCACGCAATACACTGCTGTCGTGAAGTTTGAGGAGAGATTTCACTCA
CCCTACAGCAGCAGTCGTCCCTAGGCTCGTCGCGCGTGCGCCCTCGCGTG
TGGTCCTAATGGATTACTGCTGTCCAAGCACACTGTGGCTCGCGACCACC
ACGACAGGGCGACTACCTTCTGTATGTTGTCGGTGAGGCTCCACCTGCAG
GGCAACACGTCGACGAAACGGGTTGCGATTTCCGCCCAAGGGATGAAAAA
TTTGAAACGTAGACCAGCCACGACGTTTTTGTTGGTATTGAGAACTGCTG
CAGAAAGTGCGCATTTGTTGCCATCAACCGTGTCTTTCGTAGTTTGCGAG
CGAGGGAGGAGCCGACTCCTACGGAGTTGGCTGCCGCCGTTGCCCGTAGA
CACCTAACTCAAACGAGAACGATGATTGGTTCTACGGTAGCCCTGCCTCG
GCCACCGCTATGCGTTGTACGGGTGTTTTTTTTCCCCCCAAGTGGCAAGT
CCCCGCGGACCGCAGGTTATACCCTGCATCAAGAAGCGGTCGCTGTGTCT
GTGTGTGCAATGTTGCTACCATGTTCGCAGGACTTGTGTAAGAATCTCAT
CAGGGTCGTTGCGGTCTCTCCACCATTATCAAGACACAAGCGGACTTAGT
TTTCAACGAGCTGTCCGGAGGCTTTTCTTGCGCATTCTTTGGAATACGTT
TTCCGTCGACTCTCTGAAGCCGGTCGTTTTCATTTTGTGAGGGCTTTGGA
ATTCGTATTTGGCGGGGGAAATGATCAAACTAGGGAATAAGAAAATTAAC
TTCCGGTGTCGATATGACAACGTTGTCCAAGTCTCTTGTCCACCGAATGG
AGGGATCTCACAATAGAAGAATTCTTGTGGACGTACTTTGGTATGCATTT
ATTTGAGTGTACTTTTAGGGTAAGTCAGCCTGCGACCACGGGAATCGACT
GCGTCCAGTGTTGGATCAGTGCGGACATACGAAGGTACTGGGTCGACAGA
GATCTGAACGGTTTATATGTGAAGACGACATCAACAACAATCCATCCGCG
CGGGTCATGATTGTTGTCCAGCCAGGGCTACTCCTCTACGGCTGGGAAAG
GTTGTGAAAGCGGTCCCGCACCTTTCCGTCCACCAGACCGTCGCAGCAAG
GGGTATGTCGCAGGATTGATCGAAAACCAACAGACATACGTGTCACCCTT
TCCCCGAGGTACAGATTCCGCTACCGATAGAGTTGTTGTTTGTCTTCACA
TTAAACCGTATGTCAGTTGCTAAATGCCAAAATCTAGCAAAAGACTCTCA
GCCCGTGGTCACGAAAGTGCTAGAGCCATCTGAGGATCTAAAGAACACGC
ACACATCTGACGAGAAAAAGGTATGCAAGAGCCCGAAGAGGTACACCTAA
AAATCCCTGCAGCACCGTATGCGTGCCCAAAAACTGAACTGCACGTCCGT
CCCACCGTTCGACTACAGTAGCATCACCCCCTCCCTGTCCCACTCTATAC
CAAAACGGAAGATTGCCGACTACAGCATAATGCTGTCTGAAGTGCNNN back to topprotein sequence of EsuBft877_9a-0001 >EsuBft877_9 ID=EsuBft877_9|Name=EsuBft877_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=60bp
MDSFGHPLVPPGCCCWCRRQPSCGTQQPTPLSVPTRPRMNSPRRRSTRAE
GVRFRPPAWA back to topmRNA from alignment at Scaffold_103:210760..216247+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft877_9a-0001 ID=EsuBft877_9a-0001|Name=EsuBft877_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5488bp|location=Sequence derived from alignment at Scaffold_103:210760..216247+ (Ectocarpus subulatus male Bft15b)
ATGGACTCTTTCGGCCATCCGCTGGTCCCTCCGGGCTGCTGCTGCTGGTG
CCGCCGCCAGCCATCCTGTGGCACACAACAACCTACTCCTCTCTCTGTCC
CTACTCGGCCCAGGATGAACTCTCCTAGAAGAAGAAGCACCCGTGCGGAG
GGCGTCCGCTTCAGGCCGCCGGCATGGGCTTGACCGCCTCTGCGGTGAGC
GACGCCTGCTGCACGCGCAAGCCTGCCCCTGCCTGCTGAGGCCTGCAAAT
ACTGTGGGACGATGAGGGGTCTTCATCGTAGAGAGGTGTGTTGTAATCAA
GACCTGCGAAGGGGTTAGTCGTTTGTTCACTGGGCAGACATCCACTCGGG
CTCTGTTTTTCCTGTAGTGACAGAAACGGCGTATGCGGGAGAGAATGAGT
GCGTCGGGGTGGCGCGCGTTCGCCCTCCTCGAAAATGGCGCGTGCCCTCA
GCAAAAAGGTGTGCGTGCCTCACTTGGCTCACGCGCGAAACAGCACTCCT
TTTTCGTGGCACGGGCGTTCAGGGTACAAGGCTCCTGTATCATTTTGTCC
TGTTGCATTCCTGTGCCCGAGGTGGATGACTGGCTGGTCATTTCAACTCT
ATTGCCGTGCTGAACACAGCAGTGAGTGTTGAGCAAGTGGTGGGCGGCCC
AAGGCCAACGCGGCAATGCGTGGTGATTGTTCCCTCCCTAGTTGGTGGTG
CACATGCGTTCGTAGCTTTTGTATGCACTGCACACCTGTAGCAGAGCCCT
CAATGCAATTTTTGACATGGAGTACACTTGCCCAGCTGCCGTGCAACGTT
GTGTGCTTCGATTGGCCATGTTGATGACCTCGGCACTCGAGTGCATGTTG
CTTGCTACTACTCCCCACCATCGCCTGCCAAAGGACATTCCGCCATTCTC
CCGCGTTTTATATTCTGTGCAAGGCATTGAACTGCACCCACGACTACTTG
GTTGTCGTGCAGCCGCCGGGAAAGGACATGCAGAGCCGCAACTCGCTTTG
CCATGGTGCCTGTTTCCATGGCTACACATGTCCTGCTCATAATGACGCTC
GGTTGTGATCCAACAAATTCATGCCCTAATGTCCCACCTGCTGAAATGAT
GGCGTGTGTGTGGCTGGGAATCGTTGTCCCTCTTGGACACCGACCACAGC
AGGGGTATTGTTGTATTGCGTACCACAGCTGTTGGTGACATGACACACAG
TATCATTGTAGTAGATACCACAAGATGCTATTTAAAACCTTCATAAAGTT
GCACCTTCGTGAAGTTGCGCAATACGCCACCTCGGGGCTTTGATTTGTCA
TGAGCAGTGGCCATAATCGGGGACACCCGGTCTAAACACGGCCATAATCG
GGTACTCCCACAAGATGCTGCTGGAAACAACCGCATGACACGATCTGATT
GGCCGACGCCCACGCCTACCCGACCTTGACCACCTTTCCACCGGGTGCAC
CCGATCTTCGCTACTCGCCCCCTAGGGGGATACCCGGTTTTTCTTTCCCC
TGCCCGAAAATGGCTGGGCTGTTCGGCCAAACCCCATGCACACAGGTACA
CCAATGCCTTGCGCTCGAATTCAGACGTTCTGACGGTGGGCGGTGGCGGA
CCCACTGCCGGCGGTGGGACTCTCGCTTGAGGGAAACGGCATCAGGGCGG
TCGGTGTAAATGATCGACAAGAGCTGTGGATGAATGCCTCACTCACGATA
TGCGACACACACACGAGACACATCTAAAAAGATTTGCTACTGCTGCTTTC
TCATCGGTGACAAACGAGCGGCCAGCGGTGTGCGTCCTACCCGTGATTGT
GTGCATGTGGGTTTTCGCCGAATAACTCGCCATTTTCGGGTAGGCGAAAG
AAAAACCGGGTACTCCCCCGGAGGGTGAGTAGCCAGGATCGGGGGCACCC
GGTGGAAAGACGGTCAAGACCGGGTAGGGGCAGGCGTCGGCCAATCAGAC
GTTGTCATGCGGTCGCTTCCAGCAGCATCTTGCCGGGACACTCGATTATG
GCCTTGTTTGGACCGGGTGTACCCGATTTCCGGCACTGCTCATTTGTTGT
CCTGATCAAACCCTCAATACCACCAGCTGTGAGTACATTCACGGGTGTTT
TTCACGGATGACGCTAGAAATCATACGGCTACAAGTATGGTATCTACCAC
AAGACCATCCGGGTGCAACGTACTTCCAAGAAATCCCAATCGTTTGTCAC
ACAGGTTTGATATTTTCTGTAAAACTAACGTAAACGTTGTGAACACTCGT
TGCTCGTGTTGAAGGTTGTTTGTTTCTCTCGAGCTAGCTACAAATAGCCA
GCAGTCTCATTTGCGACAGGGGAGGGCCGACGCGACTTCGAAGCCCCCTC
GGCGTGTCAGAGGCCCACTTTTCCCTCTTCCTCGGAAGGAGAAAACGCGG
TTTTGCCTCCGCTTCGAGGGTCCCATCGTGACAGCGTCAATCTCTTGACC
CTTTCCCTTACTAAAGGCTGCGACATCGTTCCTCTGACACGTGCTCTGCA
AAGAGCCATGTCGGGGGGTGCGCCGTGTTGAGTTTGCCCGTTTCCGACAA
CCCCACGGAATTACGAGCATAATTATTCGGCGAGACATTTTCATACATCT
CTGAAGCCGTAAACTAGACAACCGGTGTGGTAGGATTGTACTACTGCTGA
CGACTAAAATTGCCTGGTTCTCGCGAATCCTATTCACGAGGGCATGGAGT
CATTATTGCCAACCACGTTCGTTACACGCAATGGTGTCCTTGTCCACCCG
TTTATTCCCTATGGTGTCGAGAAACTCGTCTCTGCCCAAACTCACGCGCC
CCTGGTTTCTTGTCTTTTTCTAAAACCTACCATTTGCGTATGCAATCAGG
CCGGACCGACGAGTTCGTGTTCCAAGCCTGGGCATCGAGCAATGTCAAGA
CACGTCTGAAGATGGGCGGCAAGACGTTCGTCGCAGGCGTTTCCTCGCGG
ACGTCTTCGCGAAGTGCTTCACCACGTTGCGTTGGCTACGACAGCGCATC
ATCGAAGGGTGTGTGCCGCACGCAATACACTGCTGTCGTGAAGTTTGAGG
AGAGATTTCACTCACCCTACAGCAGCAGTCGTCCCTAGGCTCGTCGCGCG
TGCGCCCTCGCGTGTGGTCCTAATGGATTACTGCTGTCCAAGCACACTGT
GGCTCGCGACCACCACGACAGGTGTGCGGTTCGATTGAGGTAATGAGGGT
AAGCAATAGTCACGAATGCTGTAATGATTTAGTTGACGTAGGTTGCAGCC
CTCCCCAATTGCTGGAAGTTGATGAAGCACTTGGAAGTGCATTAAAGGAA
CGCGGGTGTTGCGGTCGCAAGCGAGTTGAACCGTCATCGTGGTGGCATTG
GAAAGGAGAGAGCGATGAGGAGATGTACTACCCAGCTCACTATTAGGCCC
CTGCAAAAGGCAGACAAGGCTGATGCCGATAGCTAGTTTCAAAGACTGAG
CTCTCTTGTTTTGTTTTGCCGCGCACGAGTGTTTGACGAGTTTATATTCC
AATCAATACTCGGCCGACCCCCAGAACTCTCCATTTTTTGTGCCCTGTAG
AAAATACGATATATCAACGCGTCATGAAGCATGAGCGACGAGGTTCGGTG
GTGGACGGGGATGACGATCACAAATGGATTCCCCTTCAAGAGTCCCCGGT
TATCCCCGTGGGATGAATGATGTAAACCTTGGATTATAAACAGGCCCGAC
TCGTCCTATCCCCGGCCCGTCCGCCGTGCTTCCATCTATGTTTACTAGCT
TCGTGTGTGTGCAATTCTCTGTCAGACTCTACCTCGCGCTTGATGGGAAA
TCGATGTAAGAAAACCCGTTCAACTCATTTTCCAGCGTGGGTTCCCCCTG
GGTTGCCGAAATGAAATCGGCCGCGATGTATACGCCTGTCCGTACCAAGC
CCGGAACAAACTTCCCTCTGTTGCAGTCGCCCCGTCACTTGTATCATGAG
TACACGGTAGTTTTATGCGTTGCTTCATGAACCTGTTGCACTCCGCTTGT
GCTGACGAGTACGTCGAGTTTTGTCCCTGAGAATCGAGCGAGCTGCCGTC
CTTCGTGTCGTTGCCTGACACTTTTTCCGTTTGTCTCTTGTCGGCAGGGC
GACTACCTTCTGTATGTTGTCGGTGAGGCTCCACCTGCAGGGCAACACGT
CGACGAAACGGGTTGCGATTTCCGCCCAAGGGATGAAAAATTTGAAACGT
AGACCAGCCACGACGTTTTTGTTGGTATTGAGAACTGCTGCAGAAAGTGC
GCATTTGTTGCCATCAACCGTGTCTTTCGTAGTTTGCGAGCGAGGGAGGA
GCCGACTCCTACGGAGTTGGCTGCCGCCGTTGCCCGTAGACACCTAACTC
AAACGAGAACGATGATTGGTTCTACGGTAGCCCTGCCTCGGCCACCGCTA
TGCGTTGTACGGGTGTTTTTTTTCCCCCCAAGTGGCAAGTCCCCGCGGAC
CGCAGGTTATACCCTGCATCAAGAAGCGGTCGCTGTGTCTGTGTGTGCAA
TGTTGCTACCATGTTCGCAGGACTTGTGTAAGAATCTCATCAGGGTCGTT
GCGGTCTCTCCACCATTATCAAGACACAAGCGGACTTAGTTTTCAACGAG
CTGTCCGGAGGCTTTTCTTGCGCATTCTTTGGAATACGTTTTCCGTCGAC
TCTCTGAAGCCGGTCGTTTTCATTTTGTGAGGGCTTTGGAATTCGTATTT
GGCGGGGGAAATGATCAAACTAGGGAATAAGAAAATTAACTTCCGGTGTC
GATATGACAACGTTGTCCAAGTCTCTTGTCCACCGAATGGAGGGATCTCA
CAATAGAAGAATTCTTGTGGACGTACTTTGGTATGCATTTATTTGAGTGT
ACTTTTAGGGTAAGTCAGCCTGCGACCACGGGAATCGACTGCGTCCAGTG
TTGGATCAGTGCGGACATACGAAGGTACTGGGTCGACAGAGATCTGAACG
GTTTATATGTGAAGACGACATCAACAACAATCCATCCGCGCGGGTCATGA
TTGTTGTCCAGCCAGGGCTACTCCTCTACGGCTGGGAAAGGTTGTGAAAG
CGGTCCCGCACCTTTCCGTCCACCAGACCGTCGCAGCAAGGGGTATGTCG
CAGGATTGATCGAAAACCAACAGACATACGTGTCACCCTTTCCCCGAGGT
ACAGATTCCGCTACCGATAGAGTTGTTGTTTGTCTTCACATTAAACCGTA
TGTCAGTTGCTAAATGCCAAAATCTAGCAAAAGACTCTCAGCCCGTGGTC
ACGAAAGTGCTAGAGCCATCTGAGGATCTAAAGAACACGCACACATCTGA
CGAGAAAAAGGTATGCAAGAGCCCGAAGAGGTACACCTAAAAATCCCTGC
AGCACCGTATGCGTGCCCAAAAACTGAACTGCACGTCCGTCCCACCGTTC
GACTACAGTAGCATCACCCCCTCCCTGTCCCACTCTATACCAAAACGGAA
GATTGCCGACTACAGCATAATGCTGTCTGAAGTGCNNN back to topCoding sequence (CDS) from alignment at Scaffold_103:210760..216247+ >EsuBft877_9a-0001 ID=EsuBft877_9a-0001|Name=EsuBft877_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=183bp|location=Sequence derived from alignment at Scaffold_103:210760..216247+ (Ectocarpus subulatus male Bft15b)
ATGGACTCTTTCGGCCATCCGCTGGTCCCTCCGGGCTGCTGCTGCTGGTG
CCGCCGCCAGCCATCCTGTGGCACACAACAACCTACTCCTCTCTCTGTCC
CTACTCGGCCCAGGATGAACTCTCCTAGAAGAAGAAGCACCCGTGCGGAG
GGCGTCCGCTTCAGGCCGCCGGCATGGGCTTGA back to top
|