Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LRU6 |
| ProteomeId | EsuBft851_7 |
| Protein domains | PTHR12940 |
| Protein domains | IPR019148 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | es2 similar protein 2 os:caenorhabditis elegans gn:ess-2 pe:3 sv:2 [Automatic annotation] |
| Nb exon | 3 |
| Max annot lvl | 2759|Eukaryota |
| Length | 2843 |
| Hectar predicted targeting category | other localisation |
| Evalue | 0.0 |
| EggNOG OGs | 2E6IQ@1|root,2SD85@2759|Eukaryota |
| Ec32 ortholog description | Nuclear protein DGCR14 |
| Ec32 ortholog | Ec-08_002490.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Nuclear protein Es2 |
| COG category | S |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0005975 |
| GO | 0044699 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft851_7a-0001 ID=EsuBft851_7a-0001|Name=EsuBft851_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2843bp|location=Sequence derived from alignment at Scaffold_441:59104..62727- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TGCCACCTCTTGCCTCGCTCTTCACAGGTCATCACCACGTCATCACCTTC
AGCTCCTATCCTTTACTCGAGGTGTGTTGTGTTTGACCCAAAAAACATCA
CGGAACTGGTTCTCACTCCTGCTTTTTGGCCTGCCCGTCGTGAGCCAGCC
CGACTGCTGTTGCAGTTCGGATTAAAGCTGTTACAGCGTACCGCGCACAG
AGCTCCAGCTAACTGCTGCTGCTGCTGCCGTAGATGCGATGACCACCAAC
ATGCCCGTAAACGGGGCGCGGCCAAAGATGATCACTGCGGATGGGAATAA
ATTCGAAGCGGCAACACCAACCACTCTTGCGCGGTTGGAGGATCCACGGG
CATGGCACGCACGCGGGGAGGGGGGAATACAGCGACCGAGACCTCGTCCC
GGGAGTGGAGGAATCGCCCTCCCCATGGCCCCACCACTACCAAAAGGGCG
ATCAGTTCCGCTGAAAAAGACGGTTCTCGAGGAGGAAGAGTACGTGGGGC
GCCTGGGGGAGATAATTGAAGGGGACTACTTCCCTAATAACGCCAAGATG
TATCGAGCCCTCGCTGGGCTTGCCGACCATGGCCAAGACCCCACACCTTC
CCGCACACCGGCAGGTGGCTCCATGGTAGGCACCCCTGTGACTGGGCTAC
GGAGTAGTCGCGAGTCTACTGATGGGAATGGCCTGGAGCTTCGAGTGAAT
GGGGGCGATTCGGAGGGACCATCGTCCTCGAAAGACGCGGGAAACGGCGG
CGCCCTCACCAAGTTCGTGGCGACACATACGTCGGAGGACAACGAAGCCT
TCGCCGAGCTACAGGAGAAAGACCAAGAGGCTTTTCGAAGGCGATATTTC
TGGGCTTACGATACCACACCAGACGGGGAGGGCAACAACGCCACGTCTAC
CAAATTGTTGATACTCCCCAACGGCAAGATGATGTCCGTCGAGCGGCGAG
AGCAAATGGACGCAGCTTGCGCAGATCGTCCAAAAATAGGAGATTCACGA
CCAAATCAGGTGAAGACCTGGAAGCACAGGACACGAAACCAGCTTATGTT
TTCTCCGAACTTGGCAGCGTCGAATGATGTATGCAGAATCGAGCAAGCGC
CTACGGAGGCTGCTCAGCTTCTTGTGAAGGACGGGTCAACATCGACGACG
GCAATAATGCGAAGAGTAATCAAGCAATCGGAAGAGGTCGTGAAGAGGGC
GGCGCGGGCTACAGCAACATCTACCAAAGAATCTGCAGATGGCGACTGCA
ATTCTTCAGAGTCGTCCGGGGCAGCCGCAGTAACAGCAGTCGCGGTAACT
GGAGGAGGTTATTCTTCCTCGCCCTTTAGCGACGAAGCTCTCACCGCGAC
TCCCTACCAACCGCACCAGGGCGATCCTGAAAATCATTCTTCGGGGCCAC
CGAACGCAGGAGTATCGACACAGCGGACCGAAATGGACGAACCTTCACAT
TGCCCGCCTTGCGTAGACTCGAACAAAGGCGTTGATGATTTTGGATCATC
GGAATCACGGACCGATGAGCCGCCCGCACCACAACGACCAGCACCACCAG
TGTCGCGCGGTGCGGTAGTCGTCAAAGCGAACCCCAAGGTTATTCAGGCC
CATGCAACGAGGTTCCCGGTCCCCGCCCCACGCAAACCAAGCCGAGGGTA
TTGGGCATCCCCAATTGAGAAGCCGTCGTCGTCGCGGGAATCCGTTGCGG
AGCTATTGGCGGGAACGGCGGACTCATCGGGGTACGAGGAAGTACCTATG
ACACCTTCGAGAGTACCAGGCGTGGATGGAGACTCTCCGCAGATCACTTG
GGGTTCCATCGACGGCACTCCCATCATCCTCGACCCGCGTGCAACTCCTC
TCCCAGAGGCCGGCAGGGGGGCCATGGACGTGGCGAGCTTCATGGAGACA
CTTGGAGGCGTCGTTGGCGGGGCTGGCCACCAGCAGTTCGAGATTAAAGA
TCTCCCTGCGCGAGACAAGCTTGCGCACCGCCTCGAGGCCGTAGACACTC
GCCGGAAGCGAGCGAAGGTTGGGGCCGGCGCGGCCGCAGACGGACGGGGG
ACGCACACGCCCGCGCCGGCAACACCGATGACCCCTCAGACGCCCGGCAC
AGGACGACGAACCCCCGGGACGGGGAAACGAACGCCCAGGGGTGGGAGGA
CACCTGCGAAGGGAAAGGGAAAGGGAAAGGCTGCGGCAGTGACGCCCGCC
GCTCGAAGCCTGGCGGCGAGGCTAGCTCAGCGGCAGAGCGCCGACACACC
TTTCGGCGGTGAGCTCACTCCTGGACGGCAAAGAAGGCGAACCAACCGCT
CGGGGGGGGGGGCTGGTGCCAACAGGGGGGGGCTAACACCTCTGCCGGCT
TCGCCTGCCCCGGCAAAGGGGAAGTCGGGCGCGGCTGAAGGCAAAATATC
GTCGCTTACGGATGGGCTGTTGACCTTGAAGTGAATCAACGCGTTTCCGT
TCGTTGTTACAATACGGTGATGTTGCCGTTGGTGGGGTGTTGTTGATGAC
ATGTACCCTCGCTGGTGGGGGTTTACGCTGTCACTACCCAGAGGACGGCT
GGCGCAGAATAGGGTCCAGTAAAAAGAAGGTAGATAGCGTCTGTAAATTT
AGGGGTGATTTTTGAGCGTTTGTCGTAGAAAGTGACGTACTCTTGCTCGA
CAATCGTAGCGGTGTCGCTAAAGGATGACAGTTCTTTTGCCATATGAGGG
GAGGATTTGCCGCTCTTTTGGTGGCACGAACAGCGAATCGGAGCTGGATT
GCAAAGCTGGTTTGTCCTTGTGTTTGCAACGTATGCAGCAACTTGATCAC
ACACCCACAAAGCTTTGTTGTGTGTGGTATTCACTTCACACCT back to topprotein sequence of EsuBft851_7a-0001 >EsuBft851_7 ID=EsuBft851_7|Name=EsuBft851_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=731bp
MTTNMPVNGARPKMITADGNKFEAATPTTLARLEDPRAWHARGEGGIQRP
RPRPGSGGIALPMAPPLPKGRSVPLKKTVLEEEEYVGRLGEIIEGDYFPN
NAKMYRALAGLADHGQDPTPSRTPAGGSMVGTPVTGLRSSRESTDGNGLE
LRVNGGDSEGPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFR
RRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADRPKI
GDSRPNQVKTWKHRTRNQLMFSPNLAASNDVCRIEQAPTEAAQLLVKDGS
TSTTAIMRRVIKQSEEVVKRAARATATSTKESADGDCNSSESSGAAAVTA
VAVTGGGYSSSPFSDEALTATPYQPHQGDPENHSSGPPNAGVSTQRTEMD
EPSHCPPCVDSNKGVDDFGSSESRTDEPPAPQRPAPPVSRGAVVVKANPK
VIQAHATRFPVPAPRKPSRGYWASPIEKPSSSRESVAELLAGTADSSGYE
EVPMTPSRVPGVDGDSPQITWGSIDGTPIILDPRATPLPEAGRGAMDVAS
FMETLGGVVGGAGHQQFEIKDLPARDKLAHRLEAVDTRRKRAKVGAGAAA
DGRGTHTPAPATPMTPQTPGTGRRTPGTGKRTPRGGRTPAKGKGKGKAAA
VTPAARSLAARLAQRQSADTPFGGELTPGRQRRRTNRSGGGAGANRGGLT
PLPASPAPAKGKSGAAEGKISSLTDGLLTLK back to topmRNA from alignment at Scaffold_441:59104..62727- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft851_7a-0001 ID=EsuBft851_7a-0001|Name=EsuBft851_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3624bp|location=Sequence derived from alignment at Scaffold_441:59104..62727- (Ectocarpus subulatus male Bft15b)
TGCCACCTCTTGCCTCGCTCTTCACAGGTCATCACCACGTCATCACCTTC
AGCTCCTATCCTTTACTCGAGGTGTGTTGTGTTTGACCCAAAAAACATCA
CGGAACTGGTTCTCACTCCTGCTTTTTGGCCTGCCCGTCGTGAGCCAGCC
CGACTGCTGTTGCAGTTCGGATTAAAGCTGTTACAGCGTACCGCGCACAG
AGCTCCAGCTAACTGCTGCTGCTGCTGCCGTAGATGCGATGACCACCAAC
ATGCCCGTAAACGGGGCGCGGCCAAAGATGATCACTGCGGATGGGAATAA
ATTCGAAGCGGCAACACCAACCACTCTTGCGCGGTTGGAGGATCCACGGG
CATGGCACGCACGCGGGGAGGGGGGAATACAGCGACCGAGACCTCGTCCC
GGGAGTGGAGGAATCGCCCTCCCCATGGCCCCACCACTACCAAAAGGGCG
ATCAGTTCCGCTGAAAAAGACGGTTCTCGAGGAGGAAGAGTACGTGGGGC
GCCTGGGGGAGATAATTGAAGGGGACTACTTCCCTAATAACGCCAAGATG
TATCGAGCCCTCGCTGGGCTTGCCGACCATGGCCAAGACCCCACACCTTC
CCGCACACCGGCAGGTGGCTCCATGGTAGGCACCCCTGTGACTGGGCTAC
GGAGTAGTCGCGAGTCTACTGATGGGAATGGCCTGGAGCTTCGAGTGAAT
GGGGGCGATTCGGAGGGACCATCGTCCTCGAAAGACGCGGGAAACGGCGG
CGCCCTCACCAAGTTCGTGGCGACACATACGTCGGAGGACAACGAAGCCT
TCGCCGAGCTACAGGTGAGAGGGGCGGCAAGATAATGATCTACTGTAACT
TCCCTCACAAAAATGACCTACTGTAAGTAACCGATGCACGGCAGTCATGG
GTTGGTTTCAGTCTTGTGATGGCACTGGGGTGCTCATCCTCACTGGCGTG
GAGTTTCCATCCCTCTGCTTCTTCAGCTGCACCGATCTATGTTTTGTGCT
CCTTTGCCGTGAGACGGCTCACATCAATGCCGTCTGTTTGCTTTACCCAG
TCGGACCGAGTCTTTGCTAGATCTTGTGATTAGCAACTGGCACGAGTTTA
ATGTGAAAACAACAATCGCCTTGATCCGCATTCGATTTCAGGAGAAAGAC
CAAGAGGCTTTTCGAAGGCGATATTTCTGGGCTTACGATACCACACCAGA
CGGGGAGGGCAACAACGCCACGTCTACCAAATTGTTGATACTCCCCAACG
GCAAGATGATGTCCGTCGAGCGGCGAGAGCAAATGGACGCAGCTTGCGCA
GATCGTCCAAAAATAGGAGATTCACGACCAAATCAGGTGAGACGTCGCAG
ACTTGAGTGCAGTGCAGAGCACATTAGCGTGGCGCGTAGTAGACGGAGGT
ACTACTACCTCGTGCTTTTCCGAACCCCAAACATGCCAGGCTTTGTTTGG
GAATCACCACGTCGGTTCACGACCTTTAGCCAGTCCTGTCACTCAAGATA
CCTTCGCACTTAGTTGCGCACATCGACAAACATTTCCCCCGTCATCCAGT
ATTGCTACTCCCTTTTGTAAACTTGAATATTGTCTGTACGGGGTGCTTTC
CCGTCAATGTTTTTGAATGGCACACCTCGTTGTTGGAGGATCATAGCAAT
CGCCGCATTCAGCCGACGATATCACAGCTGTTTCTGCAACATCGTCTCCT
TACTCCGTACACGTAGGACGGATGTAATTCCCCACGCGGTTATGAATAAG
TTGTGTTTCACCTGTTGCCGTATCTTGCTGCTTGCTGCAGGTGAAGACCT
GGAAGCACAGGACACGAAACCAGCTTATGTTTTCTCCGAACTTGGCAGCG
TCGAATGATGTATGCAGAATCGAGCAAGCGCCTACGGAGGCTGCTCAGCT
TCTTGTGAAGGACGGGTCAACATCGACGACGGCAATAATGCGAAGAGTAA
TCAAGCAATCGGAAGAGGTCGTGAAGAGGGCGGCGCGGGCTACAGCAACA
TCTACCAAAGAATCTGCAGATGGCGACTGCAATTCTTCAGAGTCGTCCGG
GGCAGCCGCAGTAACAGCAGTCGCGGTAACTGGAGGAGGTTATTCTTCCT
CGCCCTTTAGCGACGAAGCTCTCACCGCGACTCCCTACCAACCGCACCAG
GGCGATCCTGAAAATCATTCTTCGGGGCCACCGAACGCAGGAGTATCGAC
ACAGCGGACCGAAATGGACGAACCTTCACATTGCCCGCCTTGCGTAGACT
CGAACAAAGGCGTTGATGATTTTGGATCATCGGAATCACGGACCGATGAG
CCGCCCGCACCACAACGACCAGCACCACCAGTGTCGCGCGGTGCGGTAGT
CGTCAAAGCGAACCCCAAGGTTATTCAGGCCCATGCAACGAGGTTCCCGG
TCCCCGCCCCACGCAAACCAAGCCGAGGGTATTGGGCATCCCCAATTGAG
AAGCCGTCGTCGTCGCGGGAATCCGTTGCGGAGCTATTGGCGGGAACGGC
GGACTCATCGGGGTACGAGGAAGTACCTATGACACCTTCGAGAGTACCAG
GCGTGGATGGAGACTCTCCGCAGATCACTTGGGGTTCCATCGACGGCACT
CCCATCATCCTCGACCCGCGTGCAACTCCTCTCCCAGAGGCCGGCAGGGG
GGCCATGGACGTGGCGAGCTTCATGGAGACACTTGGAGGCGTCGTTGGCG
GGGCTGGCCACCAGCAGTTCGAGATTAAAGATCTCCCTGCGCGAGACAAG
CTTGCGCACCGCCTCGAGGCCGTAGACACTCGCCGGAAGCGAGCGAAGGT
TGGGGCCGGCGCGGCCGCAGACGGACGGGGGACGCACACGCCCGCGCCGG
CAACACCGATGACCCCTCAGACGCCCGGCACAGGACGACGAACCCCCGGG
ACGGGGAAACGAACGCCCAGGGGTGGGAGGACACCTGCGAAGGGAAAGGG
AAAGGGAAAGGCTGCGGCAGTGACGCCCGCCGCTCGAAGCCTGGCGGCGA
GGCTAGCTCAGCGGCAGAGCGCCGACACACCTTTCGGCGGTGAGCTCACT
CCTGGACGGCAAAGAAGGCGAACCAACCGCTCGGGGGGGGGGGCTGGTGC
CAACAGGGGGGGGCTAACACCTCTGCCGGCTTCGCCTGCCCCGGCAAAGG
GGAAGTCGGGCGCGGCTGAAGGCAAAATATCGTCGCTTACGGATGGGCTG
TTGACCTTGAAGTGAATCAACGCGTTTCCGTTCGTTGTTACAATACGGTG
ATGTTGCCGTTGGTGGGGTGTTGTTGATGACATGTACCCTCGCTGGTGGG
GGTTTACGCTGTCACTACCCAGAGGACGGCTGGCGCAGAATAGGGTCCAG
TAAAAAGAAGGTAGATAGCGTCTGTAAATTTAGGGGTGATTTTTGAGCGT
TTGTCGTAGAAAGTGACGTACTCTTGCTCGACAATCGTAGCGGTGTCGCT
AAAGGATGACAGTTCTTTTGCCATATGAGGGGAGGATTTGCCGCTCTTTT
GGTGGCACGAACAGCGAATCGGAGCTGGATTGCAAAGCTGGTTTGTCCTT
GTGTTTGCAACGTATGCAGCAACTTGATCACACACCCACAAAGCTTTGTT
GTGTGTGGTATTCACTTCACACCT back to topCoding sequence (CDS) from alignment at Scaffold_441:59104..62727- >EsuBft851_7a-0001 ID=EsuBft851_7a-0001|Name=EsuBft851_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2196bp|location=Sequence derived from alignment at Scaffold_441:59104..62727- (Ectocarpus subulatus male Bft15b)
ATGACCACCAACATGCCCGTAAACGGGGCGCGGCCAAAGATGATCACTGC
GGATGGGAATAAATTCGAAGCGGCAACACCAACCACTCTTGCGCGGTTGG
AGGATCCACGGGCATGGCACGCACGCGGGGAGGGGGGAATACAGCGACCG
AGACCTCGTCCCGGGAGTGGAGGAATCGCCCTCCCCATGGCCCCACCACT
ACCAAAAGGGCGATCAGTTCCGCTGAAAAAGACGGTTCTCGAGGAGGAAG
AGTACGTGGGGCGCCTGGGGGAGATAATTGAAGGGGACTACTTCCCTAAT
AACGCCAAGATGTATCGAGCCCTCGCTGGGCTTGCCGACCATGGCCAAGA
CCCCACACCTTCCCGCACACCGGCAGGTGGCTCCATGGTAGGCACCCCTG
TGACTGGGCTACGGAGTAGTCGCGAGTCTACTGATGGGAATGGCCTGGAG
CTTCGAGTGAATGGGGGCGATTCGGAGGGACCATCGTCCTCGAAAGACGC
GGGAAACGGCGGCGCCCTCACCAAGTTCGTGGCGACACATACGTCGGAGG
ACAACGAAGCCTTCGCCGAGCTACAGGAGAAAGACCAAGAGGCTTTTCGA
AGGCGATATTTCTGGGCTTACGATACCACACCAGACGGGGAGGGCAACAA
CGCCACGTCTACCAAATTGTTGATACTCCCCAACGGCAAGATGATGTCCG
TCGAGCGGCGAGAGCAAATGGACGCAGCTTGCGCAGATCGTCCAAAAATA
GGAGATTCACGACCAAATCAGGTGAAGACCTGGAAGCACAGGACACGAAA
CCAGCTTATGTTTTCTCCGAACTTGGCAGCGTCGAATGATGTATGCAGAA
TCGAGCAAGCGCCTACGGAGGCTGCTCAGCTTCTTGTGAAGGACGGGTCA
ACATCGACGACGGCAATAATGCGAAGAGTAATCAAGCAATCGGAAGAGGT
CGTGAAGAGGGCGGCGCGGGCTACAGCAACATCTACCAAAGAATCTGCAG
ATGGCGACTGCAATTCTTCAGAGTCGTCCGGGGCAGCCGCAGTAACAGCA
GTCGCGGTAACTGGAGGAGGTTATTCTTCCTCGCCCTTTAGCGACGAAGC
TCTCACCGCGACTCCCTACCAACCGCACCAGGGCGATCCTGAAAATCATT
CTTCGGGGCCACCGAACGCAGGAGTATCGACACAGCGGACCGAAATGGAC
GAACCTTCACATTGCCCGCCTTGCGTAGACTCGAACAAAGGCGTTGATGA
TTTTGGATCATCGGAATCACGGACCGATGAGCCGCCCGCACCACAACGAC
CAGCACCACCAGTGTCGCGCGGTGCGGTAGTCGTCAAAGCGAACCCCAAG
GTTATTCAGGCCCATGCAACGAGGTTCCCGGTCCCCGCCCCACGCAAACC
AAGCCGAGGGTATTGGGCATCCCCAATTGAGAAGCCGTCGTCGTCGCGGG
AATCCGTTGCGGAGCTATTGGCGGGAACGGCGGACTCATCGGGGTACGAG
GAAGTACCTATGACACCTTCGAGAGTACCAGGCGTGGATGGAGACTCTCC
GCAGATCACTTGGGGTTCCATCGACGGCACTCCCATCATCCTCGACCCGC
GTGCAACTCCTCTCCCAGAGGCCGGCAGGGGGGCCATGGACGTGGCGAGC
TTCATGGAGACACTTGGAGGCGTCGTTGGCGGGGCTGGCCACCAGCAGTT
CGAGATTAAAGATCTCCCTGCGCGAGACAAGCTTGCGCACCGCCTCGAGG
CCGTAGACACTCGCCGGAAGCGAGCGAAGGTTGGGGCCGGCGCGGCCGCA
GACGGACGGGGGACGCACACGCCCGCGCCGGCAACACCGATGACCCCTCA
GACGCCCGGCACAGGACGACGAACCCCCGGGACGGGGAAACGAACGCCCA
GGGGTGGGAGGACACCTGCGAAGGGAAAGGGAAAGGGAAAGGCTGCGGCA
GTGACGCCCGCCGCTCGAAGCCTGGCGGCGAGGCTAGCTCAGCGGCAGAG
CGCCGACACACCTTTCGGCGGTGAGCTCACTCCTGGACGGCAAAGAAGGC
GAACCAACCGCTCGGGGGGGGGGGCTGGTGCCAACAGGGGGGGGCTAACA
CCTCTGCCGGCTTCGCCTGCCCCGGCAAAGGGGAAGTCGGGCGCGGCTGA
AGGCAAAATATCGTCGCTTACGGATGGGCTGTTGACCTTGAAGTGA back to top
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