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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
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| Seed ortholog | 6087.XP_002157234.2 |
| ProteomeId | EsuBft851_6 |
| Protein domains | IPR006600 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Max annot lvl | 33208|Metazoa |
| Length | 333 |
| Evalue | 2.61e-07 |
| EggNOG OGs | COG5059@1|root,KOG0244@2759|Eukaryota,38CGP@33154|Opisthokonta,3BCNH@33208|Metazoa |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Preferred name | KIF21B |
| KEGG ko | ko:K10395 |
| GOs | GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005871,GO:0005875,GO:0005886,GO:0006928,GO:0007017,GO:0007018,GO:0008150,GO:0009987,GO:0015630,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0071944 |
| Description | microtubule motor activity |
| COG category | Z |
| BRITE | ko00000,ko04812 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft851_6a-0001 ID=EsuBft851_6a-0001|Name=EsuBft851_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3336bp|location=Sequence derived from alignment at Scaffold_441:51392..54727- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCGCGAAAAAGATGTGCTGCTGTACGCTGGTCGGAACTATATTCCTCT
CACGAGGAACGACCTGAAGGAGCGTGTGAGACAGCTCTGCAACGACGGCC
GGCCGATCCCATGGGACCCCGACAAGGGCCCGGGGAAGTCGTGGTTGCAG
GGCTTCCTCCGAAGGCACGATCGCATCAGCCTTCGACTCGCCCGCATCTA
CGAGGCCAACAGGATGACCTCGCCGGAAGATGATCGTCTGCACAACTTCT
ACAAGTTCTGGCAGGAGTTCGTCAACGAGCACAAGCCAGCACCCGACCAC
GTTTGGAACACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TCTATGTGCTTTTTTTTTTCTTCTTGTCCAACGCGTTTTCTGCAACGTTT
ACTTCGTTTCTCTCAACCGGCGTCTCGTGGGGGTTGAGTTGTGGGTGTAA
ATTGTTCATTTAACTGTAGCAGATTTTTTCGGAATTTTCTGCCGTACAAG
CCGAAAAAGGGGGGAAAGTACCCCATGTCTGGACAGGCATAATGTCGTCC
GTAGGCATTCGATTGCCGCAATTTTTTTTTTGTGAGTCCGAGTAGGACGC
ATACAAGTCATTAGTTCATCAAATTACTACGTTTGCATGGTTTCAAGGCA
AGAGAACACGCAGTACCACCCAAAAGGGGTATATTCCGTTCCTCAAAACT
GGGCCGAAAAACCGGGGATATGGGCATTTTGTCCCCGGGTGTGCACCAAT
TTATTTTATTTTTTTTATCGAACATACGTCATACTAAGAGCCTGTGTACC
AAATTTCAGGTCGTGGAACGCTTTAGAACGTGCGTATCCGGCCACTACCG
GAAAGTGGTCCTTAATACCCCCCCCCCTTCTTTTGACCCAAATTTTACCT
AGAACGTGAGGTATACTTCAAGGTCTTATGTATACTCGCCCTCACTTTTT
TCAATTTTTCTTTCTTTGTCATGTAGTCTATGTTATAGGCTATCGTATGA
TACCTTGATCTCTTCATGAATCATCTTGAAACCAGAGAACAAGCTGCCTA
AGTGGGGGGTGCCTTAAGGGGTCCTTAATACCCGTC back to topprotein sequence of EsuBft851_6a-0001 >EsuBft851_6 ID=EsuBft851_6|Name=EsuBft851_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=105bp
MREKDVLLYAGRNYIPLTRNDLKERVRQLCNDGRPIPWDPDKGPGKSWLQ
GFLRRHDRISLRLARIYEANRMTSPEDDRLHNFYKFWQEFVNEHKPAPDH
VWNTX back to topmRNA from alignment at Scaffold_441:51392..54727- Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft851_6a-0001 ID=EsuBft851_6a-0001|Name=EsuBft851_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3336bp|location=Sequence derived from alignment at Scaffold_441:51392..54727- (Ectocarpus subulatus male Bft15b)
ATGCGCGAAAAAGATGTGCTGCTGTACGCTGGTCGGAACTATATTCCTCT
CACGAGGAACGACCTGAAGGAGCGTGTGAGACAGCTCTGCAACGACGGCC
GGCCGATCCCATGGGACCCCGACAAGGGCCCGGGGAAGTCGTGGTTGCAG
GGCTTCCTCCGAAGGCACGATCGCATCAGCCTTCGACTCGCCCGCATCTA
CGAGGCCAACAGGATGACCTCGCCGGAAGATGATCGTCTGCACAACTTCT
ACAAGTTCTGGCAGGAGTTCGTCAACGAGCACAAGCCAGCACCCGACCAC
GTTTGGAACACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TCTATGTGCTTTTTTTTTTCTTCTTGTCCAACGCGTTTTCTGCAACGTTT
ACTTCGTTTCTCTCAACCGGCGTCTCGTGGGGGTTGAGTTGTGGGTGTAA
ATTGTTCATTTAACTGTAGCAGATTTTTTCGGAATTTTCTGCCGTACAAG
CCGAAAAAGGGGGGAAAGTACCCCATGTCTGGACAGGCATAATGTCGTCC
GTAGGCATTCGATTGCCGCAATTTTTTTTTTGTGAGTCCGAGTAGGACGC
ATACAAGTCATTAGTTCATCAAATTACTACGTTTGCATGGTTTCAAGGCA
AGAGAACACGCAGTACCACCCAAAAGGGGTATATTCCGTTCCTCAAAACT
GGGCCGAAAAACCGGGGATATGGGCATTTTGTCCCCGGGTGTGCACCAAT
TTATTTTATTTTTTTTATCGAACATACGTCATACTAAGAGCCTGTGTACC
AAATTTCAGGTCGTGGAACGCTTTAGAACGTGCGTATCCGGCCACTACCG
GAAAGTGGTCCTTAATACCCCCCCCCCTTCTTTTGACCCAAATTTTACCT
AGAACGTGAGGTATACTTCAAGGTCTTATGTATACTCGCCCTCACTTTTT
TCAATTTTTCTTTCTTTGTCATGTAGTCTATGTTATAGGCTATCGTATGA
TACCTTGATCTCTTCATGAATCATCTTGAAACCAGAGAACAAGCTGCCTA
AGTGGGGGGTGCCTTAAGGGGTCCTTAATACCCGTC back to topCoding sequence (CDS) from alignment at Scaffold_441:51392..54727- >EsuBft851_6a-0001 ID=EsuBft851_6a-0001|Name=EsuBft851_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=315bp|location=Sequence derived from alignment at Scaffold_441:51392..54727- (Ectocarpus subulatus male Bft15b)
ATGCGCGAAAAAGATGTGCTGCTGTACGCTGGTCGGAACTATATTCCTCT
CACGAGGAACGACCTGAAGGAGCGTGTGAGACAGCTCTGCAACGACGGCC
GGCCGATCCCATGGGACCCCGACAAGGGCCCGGGGAAGTCGTGGTTGCAG
GGCTTCCTCCGAAGGCACGATCGCATCAGCCTTCGACTCGCCCGCATCTA
CGAGGCCAACAGGATGACCTCGCCGGAAGATGATCGTCTGCACAACTTCT
ACAAGTTCTGGCAGGAGTTCGTCAACGAGCACAAGCCAGCACCCGACCAC
GTTTGGAACACNNNN back to top
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