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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LRU9 |
| ProteomeId | EsuBft851_4 |
| Protein domains | IPR002048 |
| Protein domains | IPR018247 |
| Protein domains | IPR011992 |
| Protein domains | SSF47473 |
| Protein domains | IPR018490 |
| Protein domains | IPR018488 |
| Protein domains | PTHR11635 |
| Protein domains | IPR014710 |
| Protein domains | IPR000595 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 8 |
| Max annot lvl | 2759|Eukaryota |
| Length | 1357 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.23e-218 |
| EggNOG OGs | COG0664@1|root,KOG1113@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG ko | ko:K04345,ko:K10273 |
| KEGG Pathway | ko01522,ko04010,ko04014,ko04020,ko04024,ko04062,ko04113,ko04114,ko04138,ko04140,ko04211,ko04213,ko04261,ko04270,ko04310,ko04340,ko04341,ko04371,ko04530,ko04540,ko04611,ko04713,ko04714,ko04720,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04740,ko04742,ko04750,ko04910,ko04911,ko04912,ko04913,ko04914,ko04915,ko04916,ko04918,ko04919,ko04921,ko04922,ko04923,ko04924,ko04925,ko04926,ko04927,ko04934,ko04961,ko04962,ko04970,ko04971,ko04976,ko05012,ko05020,ko05030,ko05031,ko05032,ko05110,ko05146,ko05165,ko05166,ko05169,ko05200,ko05203,ko05205,ko05414,map01522,map04010,map04014,map04020,map04024,map04062,map04113,map04114,map04138,map04140,map04211,map04213,map04261,map04270,map04310,map04340,map04341,map04371,map04530,map04540,map04611,map04713,map04714,map04720,map04723,map04724,map04725,map04726,map04727,map04728,map04740,map04742,map04750,map04910,map04911,map04912,map04913,map04914,map04915,map04916,map04918,map04919,map04921,map04922,map04923,map04924,map04925,map04926,map04927,map04934,map04961,map04962,map04970,map04971,map04976,map05012,map05020,map05030,map05031,map05032,map05110,map05146,map05165,map05166,map05169,map05200,map05203,map05205,map05414 |
| KEGG Module | M00695 |
| EC | 2.7.11.11 |
| Description | cAMP-dependent protein kinase regulator activity |
| COG category | T |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01001,ko03019,ko03036,ko04121 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0051239 |
| GO | 0044707 |
| GO | 0005509 |
| GO | 0016310 |
| GO | 0004672 |
| GO | 0044424 |
| GO | 0045926 |
| GO | 0050794 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft851_4a-0001 ID=EsuBft851_4a-0001|Name=EsuBft851_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1357bp|location=Sequence derived from alignment at Scaffold_441:19424..24637- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CCAGCATTTCGATCAAATGTTAGGCAGCGACCACCGACAAACAATCGCGG
CGGTATCGCGGCTTGCTGCGTACATGGGCCGTACGGGCAAAGGCATCAAC
CACATCTTTAAAGGTGCAGCCTCGTCTGAGCTACAGAATCTGGACTCCAG
CGGTGATGGAAGGCTCTCGCACCAAGAGCTGGAACGGGCGCTCGTGGAGC
TGGACATCAATATCACGACGGTACAAGCCCACGCTCTTGTGACCTTCATG
GGTGAGAACAACGATGGGGGAGCTGGACGGGAAGCTGGACAGGAAGCTGG
CAGCCATATCATAAGGGGAATTCCTCGAAGCACTTTGCTTTATTTGCACC
TCGTAACGTGGCACGTGAAAAACACGGCCCTACACAGCGGCATCTACGTC
AAGCTTTCGTCTCCTTTGCGTGTGTCCCCAGACAACGACGGAGATGGTGA
GATCGACGTTAAGGAGTTAGATAGCACAATCAGGCTGTACAAGCGCCGAA
AGCGAGCGGGCGAGCTGAGCACCTGGCGCGGCAACCTCGACGCCCAACAA
GACCCGGTGTTCCCCAATTGGCTGATCGGCAGGGACGATTTTCAGCAAGT
GTTTTCCAGGCAAGCAAAAAACAACGAATCCACCCGCGGTGACAGGTCGA
ATGAACACACCACATGGGGTGCCGTCGAATCGTCTTTCGCCTTTTCACGA
GGACCGTGGCGGCCGATCAACATTGAGTTTTCGGAGGAGGATGGGGCCTA
CGGGGTACCAGAAATAAAAAAAGCTCTCCAGAAACAACCCGAAGAACGAC
TCCACCGCGATGTGCAGGCTATTACCGGCTGGCTGGGGCAGCAGGATTCG
TTGCGTTCTTTGGGGGCGAAACGGCTAATGGAAGTGACCAACGTGGTGGA
GTGTCAAGAGCTTCGGCCCGAGGAGAAGCTTTTCTCGGAAGGGGACGAAT
CCGAGGCATTCTACATGATACTGGACGGGCACGTCGTGGTTCTTGTGAAA
CAATGCCCTGTGGCCGTTCTAGGGCCGGGGGAGACGTTTGGAGAGCTAGG
TCTGCAGAATCTTGAGAAACGGACCGCGACCGTAAAGGCCGATCCATCGG
GAGCTTTGCTAGTCAGGATGCGTACCAGCGACTATCGACATATTCTTTCA
AAATACCTGATGGACAAGATGCAAATGAAGATCAACCTTCTCCAAGACAC
GTTCGAGCTGGCTAAGAACTGGTCTCACTCCAAGATCAGGGCGTTTGCGT
ACTGCATGGCGCACCACAGCCACGCGAAGGGGGAATACATCTACCGGCAG
GGCGATCCTGCACACAACCTCTACATCGTGTTCAGTGGAAAAGTGAGAAA
ATGCTGA back to topprotein sequence of EsuBft851_4a-0001 >EsuBft851_4 ID=EsuBft851_4|Name=EsuBft851_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=446bp
MLGSDHRQTIAAVSRLAAYMGRTGKGINHIFKGAASSELQNLDSSGDGRL
SHQELERALVELDINITTVQAHALVTFMGENNDGGAGREAGQEAGSHIIR
GIPRSTLLYLHLVTWHVKNTALHSGIYVKLSSPLRVSPDNDGDGEIDVKE
LDSTIRLYKRRKRAGELSTWRGNLDAQQDPVFPNWLIGRDDFQQVFSRQA
KNNESTRGDRSNEHTTWGAVESSFAFSRGPWRPINIEFSEEDGAYGVPEI
KKALQKQPEERLHRDVQAITGWLGQQDSLRSLGAKRLMEVTNVVECQELR
PEEKLFSEGDESEAFYMILDGHVVVLVKQCPVAVLGPGETFGELGLQNLE
KRTATVKADPSGALLVRMRTSDYRHILSKYLMDKMQMKINLLQDTFELAK
NWSHSKIRAFAYCMAHHSHAKGEYIYRQGDPAHNLYIVFSGKVRKC back to topmRNA from alignment at Scaffold_441:19424..24637- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft851_4a-0001 ID=EsuBft851_4a-0001|Name=EsuBft851_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5214bp|location=Sequence derived from alignment at Scaffold_441:19424..24637- (Ectocarpus subulatus male Bft15b)
CCAGCATTTCGATCAAATGTTAGGCAGCGACCACCGACAAACAATCGCGG
CGGTATCGCGGCTTGCTGCGTACATGGGCCGTACGGGCAAAGGCATCAAC
CACATCTTTAAAGGTGCAGCCTCGTCTGAGCTACAGAGTATGCAACTTCT
GCCCTTGACATTGTCACGCTTTTCGTGGAGTGCAATAAACTAAAAGTTGT
GTATTGTGGATGGCATCAGTGTAGCTTTGCTGCTTGCAAGATTGGCACTG
ACAGAGAGCCACGCCCAAGTGTTCATGGCACTATTGGTGGTCTACGCCCT
TACCGTCCTGCGCATACGCTTGAACAGACCTTGGTTCGCAGCTGAGAAGG
TCTTCGCCCACATTGAATGCATCAGACAAGAGGGCGAATTTTCATGTTCC
AGTTCTACTGTATAACTTGCTTGCTGCCACGGAATTTTATAGTTGGCCTG
TGACCACGGAAGGAAGCGGTCCGGGTCAGTTGGATCGGCACGGATGTTAG
AAGGTACCGAGTAGAGACCGAGAACAATTTGATATGAAGCAGTAGATGAA
AACAACCTAACCCAATCCACTTGTTCGTATGCTTAACATTTAGCCTATGG
TAGTGAGAAGCAGTGTGCGTGATAGAATGGCACAGCTATTGCTTGTGAAT
GCTGCCACCGATCAACGCACACTCACATTCATTCACAGATCTGGACTCCA
GCGGTGATGGAAGGCTCTCGCACCAAGAGCTGGAACGGGCGCTCGTGGAG
CTGGACATCAATATCACGACGGTACAAGCCCACGCTCTTGTGACCTTCAT
GGGTGAGAACAACGATGGGGTCCTGCTTACCATACCCATCAAAGTGCACA
CCTGTTTGTGGGGACGAGCATGAGGGGTGGAATATAGTCGATCAGTTCAC
CCACATTTGCAATATGAGCTGCCTTTGATAGTTCTATTATCCATGCAGTG
CAGTATTCTCCCCGTATTTATCAAAGTTGTTCCGTGACACACTCTTGGAA
GCATCGACGAAACAGCAGTTGCAAAATGTGTTTTGATGAATCTCAACGTT
GGTAGGGTGTGTTCCCTCTGGCACGGATTGTCCAGTCTCCCTCCTCGGGA
CAGGGAGCTGGACGGGAAGCTGGACAGGAAGCTGGCAGCCATATCATAAG
GGGAATTCCTCGAAGCACTTTGCTTTATTTGCACCTCGTAACGTGGCACG
TGAAAAACACGGCCCTACACAGCGGCATCTACGTCAAGCTTTCGTCTCCT
TTGCGTGTGTCCCCAGACAACGACGGAGATGGTGAGATCGACGTTAAGGA
GTTAGATAGCACAATCAGGCTGTACAAGCGCCGAAAGCGAGCGGGCGAGC
TGAGCACCTGGCGCGGCAACCTCGACGCCCAACAAGACCCGGTGTTCCCC
AATTGGCTGATCGGCAGGGACGATTTTCAGCAAGTGTTTTCCAGGCAAGC
AAAAAACAACGAATCCACCCGCGGTGACAGGTCGAATGAACACACCACAT
GGGGTGCCGTCGAATCGTCTTTCGCCTTTTCACGAGGACCGTGGCGGCCG
ATCAACATTGAGTATGTTTAGAGGCCGCTTGGAGCACGCGTTCCGTCAAG
GCAGCGCAGTTGCGGATCGGTCAAGCCACCGCCAAAAACCATGCGGTCCC
TACAACAAAACAACTTTTCGAATACGAACGAGTGCAGGTGCTTCGCTTAT
TCCGAAGGGTTTCGGTTTGAGACAAGGGGCATCCGTCATAGGAGCACATC
ACGTTCAACAAACGCAACCTAGGCATGCGAACACAAGGCACCAAAACACT
TGTGTCGAACATGCCTACAGCAACAAGGCCGCTTTTCCCCTACCAATAGC
CCCCTAGCTACCATCGCCTGTGGATGCAGGTAGTGTCTTCAGTTCCTGGT
TCACTCATGAGGTAATGCTCGTTCACGTGTGCTGAATCAGGTTTTCGGAG
GAGGATGGGGCCTACGGGGTACCAGAAATAAAAAAAGCTCTCCAGAAACA
ACCCGAAGAACGACTCCACCGCGATGTGCAGGCTATTACCGGCTGGCTGG
GGCAGCAGGTATCTTCCCTTGTGCACACAGCACACCTACCAGTGCTTGCA
CGCTTTGAAAGCACACATTTTTGAAAGTACGACCAGGATCTATGTGTGTG
CGTGATTCGCAGAGGAAACTCTTAAAGAATTTTTCATTTGATTATAGTAC
AACGTGCAGTCCCGATGAGAGCTACCTTGTATTCCTACCCCAAAGACTGC
AAGGCTCAGGATGCTACCGTGCCCAAGACATGGCTGCTGGAGGTCAGGTC
ATAAAAACCTGTACGCCTTCGCGCCGTCTAGCCAATACTCCACAATGACG
ACGGCTACCGCGCACCTACACAATCGTAGAACATCATCTCACGAATTTCC
ACCTGATGACCTGCTAGGTTGGATCGCGCACGATCTAAGAGCCGTCCATG
ACACTGACACTGGTCGTATTCGTTCGAAATTTCCCTTCAGGATTCGTTGC
GTTCTTTGGGGGCGAAACGGCTAATGGAAGTGACCAACGTGGTGGAGTGT
CAAGAGCTTCGGCCCGAGGAGAAGCTTTTCTCGGAAGGGGACGAATCCGA
GGTGCATGAAAAGACGAACAAGCACTCACAAGTGCGCTCTTTGGCTACTT
TTGTGTAGTGGTTTACCAGATGTTGTTGAAGAGCCAAAGTCTGGCTGATA
AGGGAAATGGTGGCTGGGAACGGATACGATACGTTCCGAACAGCGCTTTC
AGGTGAAACACGGTTTCGTCGGTCAACCTTGCGGGTTTGTGTGGCGCCCA
CAGGATCAGCAGACGGAATTACTTCGGTGTCTCGGGATTCTCCTGAGCAA
CCTGTACCTTCTCTAAGCGTATTTCTTGTTGCATGCAGTACTCCGAACGC
CATGGTGTACATTGTGCATTGTGTTTTGCAGAGGACGCGAGTATTTCAAA
CAGATAACCGTGGCTCGGTTTTGGCTCGTCTTCCTCGCGAGCCACACTGT
TTCAGTTGTCTTGTCTTGCCTTTCCCTTGCTACAAGAACGTCGCCTCGAC
TTTTTTCCGAACAGGGTCCCCGGCTCCTACACCGCGGTGACAGCGAACGG
GCCCTTGAAGAGACAGGAACTTGTTTCTTCCTTCTGGCAAACGGCCCGTA
CCATCAGCCCGTGCCTCGAGTACATGCCCAAATCACACCAACATTTCCCC
ACGGGTATCGTCTTCAGTAGACCACTGTTTCGGTCAACAAAACACCTGAA
AACTGGACGTCTTACTTTGTCGCGTTGAAGAGGGCCGCGTCCTACAGCAG
TTGCGTACTGTCTCGAGCCGATCTTCCGTCCATGCCGCCCCCACCCCACT
GCACGACGTGGTTACAGGCATTCTACATGATACTGGACGGGCACGTCGTG
GTTCTTGTGAAACAATGCCCTGTGGCCGTTCTAGGGCCGGGGGAGACGTT
TGGAGAGCTAGGTCTGCAGAATCTTGAGAAACGGACCGCGACCGTAAAGG
TGGGCTGATGACTTGGATTTCCAACATTCTTCGTATACCGTGTACCAAAT
AGCATGACGTTAAAAGGGTTCGCTTATTCCAGACCCGCCGTATACTGCGT
AGGGCACAGATGGCTGGAAGAGCGGCCGTGAAGTGTTGTGCACCGTGCTG
ATTTGTCCGTGCAAATGGTGATCGGTAGTGTGGGTTACTACGCGATGATA
CCCAGTTACGGGACGTGCTCGACATGTGTTGCGCACAGTACCCGGAATCT
GTGTCTTCGTAGGGTTACTTCTAACAGAAGGAACCCGCCTGACTCGTAAG
CGCGGACTCAACGACCTTTCAGGCTACAAAGTACCGGAGAACGAATACGC
GCACGAGAAGATACAGAGATCATGTCGCTGTATGTACAACAGTTGGAAGA
ACATTATTAGTGTGCAAGGTGTGGCTGACACTACAGAGCGATTCAAAGCA
GTCTTATTTTCTCGTGTGTCATAGTTAGAACACAGGTCGTTCCTTGCCGT
CCAAAGGCTCCTAGTCGGGTAGATGCCAGTAGTTGCCCTGGTGACAAATT
ACCGACGCTGCGGCAGCCTACTCTTTTTCGAACCGCAAGAAATTAGCAAT
ACGTGTTAAGCCTACTGGCCGCTGGTCAACTGAACGGCCGTTTGTGCGTC
AACTTCCATAGGCCGATCCATCGGGAGCTTTGCTAGTCAGGATGCGTACC
AGCGACTATCGACATATTCTTTCAAAATACCTGATGGACAAGATGCAAAT
GAAGGTACGACGGCAATTCTGCAACGAGGGAAAGGGGGAGGGGGCTCCTG
TACCGCCTGTTTGGGTATTTCTCAGGGCAGCTACGTAGATCAAGATACCT
ATGTTGCAGGGTGCAGGATGAATATCCTAATGGACAAGATGCGTGTCAAG
TTTAGCGTGCATGCTGCGCTACTTCGGTGATGGCGAATGGGCGATTAAAC
AAACACCTGAGATCTCGGAATCCCAGCACCAGCTTCAACATCTACTGAGA
ACCCTTCATGACTGCTAACTCAAGCCAACCCCAACCCTCCAACCCCACCG
CGCTTGCCCTGGAAATGTTCATCTCGCTGCCGTAGCCACGAGACATCTGC
ACGTTGCACCTAATTTGTGGCGTATTTTACTCTCGGGATGTGTTTTTGAC
CACGTGCTTTCACAACACTACGCCAGACATAGTTCGAAACGGGGTCGGAC
ACTGACAAGAGCATCCAAATGCAAGAGGGATCGATTTAGTATCCTCCACA
TTTCCGCTGCAGGGTGATTGGGGTGGTGCTATCAACGCCAAATTGTGTGG
TGACCCTTCGGCTGGGAGAATTCGTGTTTCTGGAACCTCCTCCGCAGTGT
GGGGTGTTTACGTGTTTGCCGAAAAGGCCGTGTGGTGAAGTGAAAGCCCG
CCCAATGTTGAAGTCACCGATTCCGCAGCTGCGTCGATCTGGTGAGGAAA
CGCATGCCATCGTTGTTTTCCGTCCCTGTGTTATGTTCGAACGCACACAT
GGCCCGTGGTGTTATGTGCGTGACATGAACGAGACAGATCAACCTTCTCC
AAGACACGTTCGAGCTGGCTAAGAACTGGTCTCACTCCAAGATCAGGGCG
TTTGCGTACTGCATGGCGCACCACAGCCACGCGAAGGGGGAATACATCTA
CCGGCAGGGCGATCCTGCACACAACCTCTACATCGTGTTCAGTGGAAAAG
TGAGAAAATGCTGA back to topCoding sequence (CDS) from alignment at Scaffold_441:19424..24637- >EsuBft851_4a-0001 ID=EsuBft851_4a-0001|Name=EsuBft851_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1341bp|location=Sequence derived from alignment at Scaffold_441:19424..24637- (Ectocarpus subulatus male Bft15b)
ATGTTAGGCAGCGACCACCGACAAACAATCGCGGCGGTATCGCGGCTTGC
TGCGTACATGGGCCGTACGGGCAAAGGCATCAACCACATCTTTAAAGGTG
CAGCCTCGTCTGAGCTACAGAATCTGGACTCCAGCGGTGATGGAAGGCTC
TCGCACCAAGAGCTGGAACGGGCGCTCGTGGAGCTGGACATCAATATCAC
GACGGTACAAGCCCACGCTCTTGTGACCTTCATGGGTGAGAACAACGATG
GGGGAGCTGGACGGGAAGCTGGACAGGAAGCTGGCAGCCATATCATAAGG
GGAATTCCTCGAAGCACTTTGCTTTATTTGCACCTCGTAACGTGGCACGT
GAAAAACACGGCCCTACACAGCGGCATCTACGTCAAGCTTTCGTCTCCTT
TGCGTGTGTCCCCAGACAACGACGGAGATGGTGAGATCGACGTTAAGGAG
TTAGATAGCACAATCAGGCTGTACAAGCGCCGAAAGCGAGCGGGCGAGCT
GAGCACCTGGCGCGGCAACCTCGACGCCCAACAAGACCCGGTGTTCCCCA
ATTGGCTGATCGGCAGGGACGATTTTCAGCAAGTGTTTTCCAGGCAAGCA
AAAAACAACGAATCCACCCGCGGTGACAGGTCGAATGAACACACCACATG
GGGTGCCGTCGAATCGTCTTTCGCCTTTTCACGAGGACCGTGGCGGCCGA
TCAACATTGAGTTTTCGGAGGAGGATGGGGCCTACGGGGTACCAGAAATA
AAAAAAGCTCTCCAGAAACAACCCGAAGAACGACTCCACCGCGATGTGCA
GGCTATTACCGGCTGGCTGGGGCAGCAGGATTCGTTGCGTTCTTTGGGGG
CGAAACGGCTAATGGAAGTGACCAACGTGGTGGAGTGTCAAGAGCTTCGG
CCCGAGGAGAAGCTTTTCTCGGAAGGGGACGAATCCGAGGCATTCTACAT
GATACTGGACGGGCACGTCGTGGTTCTTGTGAAACAATGCCCTGTGGCCG
TTCTAGGGCCGGGGGAGACGTTTGGAGAGCTAGGTCTGCAGAATCTTGAG
AAACGGACCGCGACCGTAAAGGCCGATCCATCGGGAGCTTTGCTAGTCAG
GATGCGTACCAGCGACTATCGACATATTCTTTCAAAATACCTGATGGACA
AGATGCAAATGAAGATCAACCTTCTCCAAGACACGTTCGAGCTGGCTAAG
AACTGGTCTCACTCCAAGATCAGGGCGTTTGCGTACTGCATGGCGCACCA
CAGCCACGCGAAGGGGGAATACATCTACCGGCAGGGCGATCCTGCACACA
ACCTCTACATCGTGTTCAGTGGAAAAGTGAGAAAATGCTGA back to top
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