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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D8LLL9 |
| ProteomeId | EsuBft850_7 |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | IPR007511 |
| Protein domains | SignalP-noTM |
| Protein domains | SignalP-TM |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Protein domains | SIGNAL_PEPTIDE |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 7 |
| Max annot lvl | 2759|Eukaryota |
| Length | 205 |
| Hectar predicted targeting category | signal peptide |
| Evalue | 2.06e-174 |
| EggNOG OGs | 2C2QW@1|root,2SDB4@2759|Eukaryota |
| Ec32 ortholog description | Protein of unknown function DUF501 |
| Ec32 ortholog | Ec-04_005280.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Protein of unknown function (DUF501) |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft850_7a-0001 ID=EsuBft850_7a-0001|Name=EsuBft850_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2057bp|location=Sequence derived from alignment at Scaffold_129:468011..473652+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CAGTCGCTGTGCACTCTTGCTCGGTCGACTGCTTGTCGTAGAAGCTTTCA CCACGACACATGGTCCGGATATGCAGGGTGGCCCTGCTGGTGGCCATGGT GGCGTCGCCGGTCCGAATACGTTCCTTTCGGGGGGTGACCGCCTGGACCC ACACCGTGATCCCGACGAGGGTATCGACGCTCATCGGCAGCAGCAGCAGC AGCAGCATGGGCCGAACGGGCGAGGAGGCGGTGCATGCGGCGGGATACTT GTCTGTTGGTGGTGCGTTCAGCCGAGGCGGGTGGCGGGGAAGGAGGAGCA AGCGGGGTAGAAATAGCGACGACGGGGATATCACCCGCTGCTTCTCGACC CTTGGCAGCAAGAGGCAAAACTCCAGGCCCGTCGGGACGGATGAGCTGAC CCAGACCGCCAGAGACAGGGCTACCGCTCTCGTTGAGGCCTACGTCCCCA CGCCCGCAACCGAGGGAGACCTGCGCTGCATCGAGGAGAGACAGCTGCGG CACAAGGCGGGGGCGTCGTCTAGGTCTATGGGCGTTTCCCCTAACCCCTG CCGACACGGCTTTCCGCAGGCGTTTGCTTTCGACCCCTGCGGACACAAGG TGTCCTCGGGGCTCTTCCGGCTGTCGTGCCCTCTACTGGTGCAGGCCATC GATCTGCTGGAGGACGAGGGGGGGATAGAGGACGTCAATGCAAGGCTGGC CAGCGAAGAGGGGCTCCGCGAGGACTTCATGGCCGTGAACTTGGCGCACG GCATGCTGCGGAGACGTTTGGTGACTCCGGAAAAGCTGGGCATGGTAGAG GAGACTATCGGGAAGGAGGGGGCTGAACGCTTTCTCGACAGCGGCATTAC AGGCGTCACCACCGGGAAGGTGCGCGACGCAAAGTGCCTCCACGCGCACG TGGCGGACGCCCTCATGCGCGGCAGAAGCGCCAACGCGATCGGACGCGCG ACGCTGGAGCTTCTCGAGGCCCGAGGGGTGCGGACGGACGGGGGCGACCG GTGCAGCGAGCAGTGCAACTATCGGGTGGAGGAGACGGCCGACAGCTGGA GGTATACGCCGCAGAAGAATAAACAGAAGCTTCAAATGAGAAAGGTGCGG CGAAAAGACATGAAAGCCTGCATCACCAATAAGGAGAGGGAGCAGGAGAC CAAGGATGATGCCGTCGTCGACGCCGATAGCGGCAGCGGCCTACCTCTCA ACGGCGAGGCCACTGCCGCCAACAGCTACAAAAACAGCTGGACCGGTAGG AATAGCATCAGAACACGCGGCGACACCGTCGTGAAACACGATACCACTGG TGGTACTGGCAAACCCGGCGATGGTGAAATGGAAAGAGGCCATGGGACGA TGCGGGTGGAGAGGACCCTGTGGCTATGCGATGACGATAGCGTCCTTCCG GTCTTAAGAAAGGCTCAGGGTGACGGTTTTCTCCTGTGACATTCGTTAGG CCTGGGTATTGATATTTCTCCGGCCGCGGCTATTGCAACTTTACGGCATT GCCATGCAGCAGCCGGGAGATTGCCGGGTTGCCGCAACCACGGAATCGGC CGTTTGCTATTGAAAAAGCTCGGTCCATCGTTGTTACAAAAGAAGGAGAA TCCGTTCAAAAAACGTTTCGCGCAAGCGTGATGGCGTGTACGTAGCCCGC GCTTAAGCATACGTGTTCATGTGTCACAAACGCAGGCCAGTGAAGGCAAA GAAGGTCCGCAAGTCTCCCGAGAAAAGGTAGTGCAGGAAAATTAGTAGCA TGATCCGGGTGATCCGGATATGGTGCCTACAAATCAATGGAATTTTTTTG GCCTACGAGAGGAGGGATATCCAGGTAGTCCACGCAACGGTTGTTTGACA CGTTCTTCTTGTGAAATACGCTAAGCGAAACTTGCACCTACTCCGGAAAA GCCGTCCGACAAATTGTAATATGGTGGCAAGAGTTTTAGAAAATCTGTCG GTGTGTCGGTTGTTTGTGGTATAGTCTAGGAAGTGGGAAAGTGTGTAAAC AACTGGTTCCCTGGAAAGGGAAGATAATGTCAAAGAGAAACAATGCCAAC GTAGACG back to topprotein sequence of EsuBft850_7a-0001 >EsuBft850_7 ID=EsuBft850_7|Name=EsuBft850_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=459bp
MVRICRVALLVAMVASPVRIRSFRGVTAWTHTVIPTRVSTLIGSSSSSSM GRTGEEAVHAAGYLSVGGAFSRGGWRGRRSKRGRNSDDGDITRCFSTLGS KRQNSRPVGTDELTQTARDRATALVEAYVPTPATEGDLRCIEERQLRHKA GASSRSMGVSPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDLL EDEGGIEDVNARLASEEGLREDFMAVNLAHGMLRRRLVTPEKLGMVEETI GKEGAERFLDSGITGVTTGKVRDAKCLHAHVADALMRGRSANAIGRATLE LLEARGVRTDGGDRCSEQCNYRVEETADSWRYTPQKNKQKLQMRKVRRKD MKACITNKEREQETKDDAVVDADSGSGLPLNGEATAANSYKNSWTGRNSI RTRGDTVVKHDTTGGTGKPGDGEMERGHGTMRVERTLWLCDDDSVLPVLR KAQGDGFLL back to topmRNA from alignment at Scaffold_129:468011..473652+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft850_7a-0001 ID=EsuBft850_7a-0001|Name=EsuBft850_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5642bp|location=Sequence derived from alignment at Scaffold_129:468011..473652+ (Ectocarpus subulatus male Bft15b) CAGTCGCTGTGCACTCTTGCTCGGTCGACTGCTTGTCGTAGAAGCTTTCA
CCACGACACATGGTCCGGATATGCAGGGTGGCCCTGCTGGTGGCCATGGT
GGCGTCGCCGGTGAGTGCATCGCTTTCTGTGTGCCAGGCCCCGCTCTTGG
TTGCAGGGTGCCTTGCTCAAGTTTGTAGGAGCTACTGCTGTTACTTGTCG
CGTATGCTGCCTGGAGCATAGACTGTAGGCTGCTCCTCGTTTACGTGTAT
ACACCTGTGGGGCGATACATGGTTATAAAGACAACGGCGAAACTCCTGTT
GCGTTTTTCAATTGTCCTGTGCTCTCCGTGCCTGTTTGTTGGCGCTGAGT
TGGTCCAAACGTCTGGTGACCATTTTTGTCTATTATAGTTTTGCAGTTCA
AACGCTGATCTTATGACCTTGTGGTGTATTCTAAGCAAGATATCAGTCAG
CGTGCACGATACGCGAGCAACTGCTGTCGTGCCTCATCTTCAGATCGGCT
GGCCCCCTTTGTACATACTCTACCTCAGGATGCATATTACAACACACACG
AGGTCGACTATTCGCTTTCATCCCATTGCCAAGCAAAGTACAGTGTGACC
CGAGTCTCCCTAATTAATCTGCATGTACACAAAATTACGTGTAGCGTCAT
GATGGCCGACGCGATCACTGTTGATAGCTGGTACCTTACCGAACGCAGGT
CCGAATACGTTCCTTTCGGGGGGTGACCGCCTGGACCCACACCGTGATCC
CGACGAGGGTATCGACGCTCATCGGCAGCAGCAGCAGCAGCAGCATGGGC
CGAACGGGCGAGGAGGCGGTGCATGCGGCGGGATACTTGTCTGTTGGTGG
TGCGTTCAGCCGAGGCGGGTGGCGGGGAAGGAGGAGCAAGCGGGGTAGAA
ATAGCGACGACGGGGATATCACCCGCTGCTTCTCGACCCTTGGCAGCAAG
AGGCAAAACTCCAGGCCCGTCGGGTGGGTTCAGGGGTATGCCCACGCATC
TACCAAGATGTCGCACTCCATCTACAGGAGATATGTACCGTACAGCAGTG
TTCGAGGTCCGCTGGCGATCACAACCTACCAGTATGTACAAGACCTGAAT
GCAAGCAACGTTCTGACGGAGTAGTTGTGGTTCGTAAGTATCCCGTGGAT
AACTATTGAGACGGCTGCGCGTGTGATTGCTCGTGTGTGTCCCTTGTGCA
TTTTCCGATGTGGAACTTAGGCACATGTATTTTTTTTCTTGTCGAGTGCA
TGCATACCCAATTTCCCCTGTCGTTGTGGACAAAAAGCTGCCGTCCAGCT
CTGCCCGAAGGGAGCCTCAACGTGGCATCCACGGCAACGCGCCTCGCACA
AATGCCATGCCTGGTGATCGTTTTCTGGGATCCTCACTGCTACTTCTTCC
TTTTTATCGCAGAAGCGCATTGTTTGTTGGAATCCTCGCTACTACGGTTT
TTGCAGGAGCACATCGTTTGTTTGTTGGGACCCTCACCACCATCGTTGTT
TCGCAGCAGCACCACCCCTTCTTTCCCCCGTGAAGTTCTGCACCCCCCTT
GCACACGCGCCCGCAGGACGGATGAGCTGACCCAGACCGCCAGAGACAGG
GCTACCGCTCTCGTTGAGGCCTACGTCCCCACGCCCGCAACCGAGGGAGA
CCTGCGCTGCATCGAGGAGAGACAGCTGCGGCACAAGGCGGGGGCGTCGT
CTAGGTCTATGGGCGTTTCCCCTAACCCCTGCCGACACGGCTTTCCGCAG
GCGTTTGCTTTCGACCCCTGCGGACACAAGGTGCGCTTTGGAAGCGGAAC
TCGCGTCGTCGTCTACGAAGCTGGTTCATGGGTTTGTGACTTGATGCCTT
TTTGTGGTGTATGTCAACTTAGTTCGCCAAGCACAACAGGATCACATCGT
GGATTGAGTTGATACATGGTGATATACAGTATGGAAGCTGGCGTCTGTCA
AGGACAGAAAACGAGCGGGCGGGCGCGCGCGCGCGCGCCCGCCCGCGGCG
CCCTGACAAGCGCTCACGGCAAATAAGAGGAGCCAAAGCGAGTAGACGCT
GTGATGCCGGGTATCCCACAGGCAAAGGGTGCGGTTCTCGTCCCTACCCC
CCTCTCCCCCATTTCTCGATGGTGGTCGGGTAGATGAAAATGTTGTGTGG
GGTCGAGAACCCTCACTCCGCGCAAAGGGCATGATCGCACCACGTTGTGT
TAAAATTGGTCAAGCACCTCACACAGTGCTTCTAGCTGTCTCTTGAAATG
AAAGCACAAGAAAATAAATTAAGTCATTTGCAGCTGTCATCCGTTTGCAA
GGAAGTAGGCAGAAGATGACGAACACCCTCGGCACGGTGCAGCGCACCGT
CCATGCGACTCGCCGAATGCCTCACGGCGCTTCGCTCTTGGTGATGTGAG
AGCCTGGTAAATTTGTAGGGATGCGAGGTCAATGGCCCAACAACTCCGGC
ATGCGCGACTTTGAGTACCTCTCCCTCACCACCCGTCTCCCTTAGTTCGA
AATCGACCCGACCATGCTTGCACCGTGCTGATGCGTCCTCGACCGTTGTT
TCTAGGTGTCCTCGGGGCTCTTCCGGCTGTCGTGCCCTCTACTGGTGCAG
GCCATCGATCTGCTGGAGGACGAGGGGGGGATAGAGGACGTCAATGCAAG
GCTGGCCAGCGAAGAGGGGCTCCGCGAGGTGCGTGATGGCCCCGCCTAGT
TCTGCCCTGTCCCACGTGGCCCGAAGCACTTTTGGACGGTGTCGATACGC
TCGGGAATGTCGGCTGTCAAGAGCAAGGTGGCACGGTGACTCTGCGGGCA
CGGCAATTCAGCGAGAAACTATTATACAGCAGTTCATGAAGTGTTAGCCC
TTTGCTGATTTTTGTGTGCTTCCATACATGATCGTACTTGTTGAGTGCGG
GTGCGAGAGTGGTTGCAGTGCCCGACGGGGGGTACTAGCCTCACCGAAAA
GAGAGCCTGCAGGGAGCATCTAGACAACGGGCGTGTGTGAAGCCCTGTTT
GTGGATGTCATCTACCTCTGGTTATATTTTCTGGACGAGTCGTCCTAGAT
TGCGCTGGAGGCAGCCCGCACTGGAGAATCTTGTGTACAGCCCCCCGCTC
CCTCTAGTTCTGGGGTCTACGGACAATCTAGCTTCGATTTCTACATAAGT
CGGCTCTCGTGCTCAACGTTCTATGGCATTGCTGATGAAGACAGCTCGGA
AATCCAACGTTGACAGATGTCCTGGGTCGTTCTAACTGTACGTGGTTGCG
TACCTCTACTACACAAGAATTTCGTACCACTTTCCACGGACTTGATTTTT
TTCGTTTCATGCGGTTCGCGTGCGTGCGTACGTGTCGTGCGTGATTGTTT
TGATGACCCGGCTCTGCTGGGTACTGCTTTGCAGGACTTCATGGCCGTGA
ACTTGGCGCACGGCATGCTGCGGAGACGTTTGGTGACTCCGGAAAAGCTG
GGCATGGTAGAGGAGACTATCGGGAAGGAGGGGGCTGAACGCTTTCTCGA
CAGCGGCATTACAGGCGTCACCACCGGGAAGGTGAACACGAGCTTGCCAG
GATTCAGCAGGCGACCTCCCTGCGAAAGTCCAAGCTGAATTCTGGCCTGT
CATCTGGTAGAGACCAAACCACTCTTGTTCCAGCTAGTAAAGCCAGCGAT
TGTAGGAAACGGCCCGCACGGACCGGAGGGCAGCAGTGGCAAGGCTTACC
CGGGCAGCGAAAGGTCCGCGCCGAACAGGGTGTAAATAGAGTTGGGCTTT
GAAAATTCGCGTGCACGATGTCAAGCGCCCCAATGCGCGTGTTGCAGGAG
TTTTCTTTTTCGTCCCACAATCACAAGGTGTGCTTTTGGTCATGCGGCGG
CGTTACAGGCTGCTGGTTTAGGCCTGAGGAACTGACGGGTTTTTTGGTCA
TTGCCGTGGCGTTGTTCATCGGCCGCGCTCGGCCACAACCAGGTGCGCGA
CGCAAAGTGCCTCCACGCGCACGTGGCGGACGCCCTCATGCGCGGCAGAA
GCGCCAACGCGATCGGACGCGCGACGCTGGAGCTTCTCGAGGCCCGAGGG
GTGCGGACGGACGGGGGCGACCGGTGCAGCGAGCAGTGCAACTATCGGGT
GGAGGAGACGGCCGACAGCTGGAGGTGAGGGCATTCAAGGGAAAGAGAGA
GATAACGATGTCCGGTGCCCGGGGGTTTTCAATCGGTCAACTAGCGTATG
CGACACAAGATGATCCATACACACCAGTGATCAAGATCTTGGCGACGTCG
GTCCGAACGAGCTCGAGAGCTCGAGCAGGTGGCTGGCAGTGGGAGCGCGG
GATCAATTGCTTGGCTGCTATAGTTTTTCGCCATGGTGCGATCTTGTTTC
GTTGCTGTCCGCGTTTGCAGTTTGTAGGCAAGGTTCTCGACGTTTTTTTG
GCCTAGTAGTCAATGGTGGTCTTGGCGGTGGTGGCGGTGGTGGTAACGAA
CTCACCATCCATATATATCCCGTGCGGACCTACGCGTTCCTTACGCCTTC
CGTCCCCGACCCCAATTCGTTGTTCGTCCCAAGACTTTACAGCCCACTGC
AACACCTACATTTGCAGTCTAGAGTAGAAAAGAAATACAAGCAACCTCAT
ACTTCCGTCGGCGCCCGCTCACGCCACCCTTGTCAGGTATACGCCGCAGA
AGAATAAACAGAAGCTTCAAATGAGAAAGGTGCGGCGAAAAGACATGAAA
GCCTGCATCACCAATAAGGAGAGGGAGCAGGAGACCAAGGATGATGCCGT
CGTCGACGCCGATAGCGGCAGCGGCCTACCTCTCAACGGCGAGGCCACTG
CCGCCAACAGCTACAAAAACAGCTGGACCGGTAGGAATAGCATCAGAACA
CGCGGCGACACCGTCGTGAAACACGATACCACTGGTGGTACTGGCAAACC
CGGCGATGGTGAAATGGAAAGAGGCCATGGGACGATGCGGGTGGAGAGGA
CCCTGTGGCTATGCGATGACGATAGCGTCCTTCCGGTCTTAAGAAAGGCT
CAGGGTGACGGTTTTCTCCTGTGACATTCGTTAGGCCTGGGTATTGATAT
TTCTCCGGCCGCGGCTATTGCAACTTTACGGCATTGCCATGCAGCAGCCG
GGAGATTGCCGGGTTGCCGCAACCACGGAATCGGCCGTTTGCTATTGAAA
AAGCTCGGTCCATCGTTGTTACAAAAGAAGGAGAATCCGTTCAAAAAACG
TTTCGCGCAAGCGTGATGGCGTGTACGTAGCCCGCGCTTAAGCATACGTG
TTCATGTGTCACAAACGCAGGCCAGTGAAGGCAAAGAAGGTCCGCAAGTC
TCCCGAGAAAAGGTAGTGCAGGAAAATTAGTAGCATGATCCGGGTGATCC
GGATATGGTGCCTACAAATCAATGGAATTTTTTTGGCCTACGAGAGGAGG
GATATCCAGGTAGTCCACGCAACGGTTGTTTGACACGTTCTTCTTGTGAA
ATACGCTAAGCGAAACTTGCACCTACTCCGGAAAAGCCGTCCGACAAATT
GTAATATGGTGGCAAGAGTTTTAGAAAATCTGTCGGTGTGTCGGTTGTTT
GTGGTATAGTCTAGGAAGTGGGAAAGTGTGTAAACAACTGGTTCCCTGGA
AAGGGAAGATAATGTCAAAGAGAAACAATGCCAACGTAGACG back to topCoding sequence (CDS) from alignment at Scaffold_129:468011..473652+ >EsuBft850_7a-0001 ID=EsuBft850_7a-0001|Name=EsuBft850_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1380bp|location=Sequence derived from alignment at Scaffold_129:468011..473652+ (Ectocarpus subulatus male Bft15b) ATGGTCCGGATATGCAGGGTGGCCCTGCTGGTGGCCATGGTGGCGTCGCC GGTCCGAATACGTTCCTTTCGGGGGGTGACCGCCTGGACCCACACCGTGA TCCCGACGAGGGTATCGACGCTCATCGGCAGCAGCAGCAGCAGCAGCATG GGCCGAACGGGCGAGGAGGCGGTGCATGCGGCGGGATACTTGTCTGTTGG TGGTGCGTTCAGCCGAGGCGGGTGGCGGGGAAGGAGGAGCAAGCGGGGTA GAAATAGCGACGACGGGGATATCACCCGCTGCTTCTCGACCCTTGGCAGC AAGAGGCAAAACTCCAGGCCCGTCGGGACGGATGAGCTGACCCAGACCGC CAGAGACAGGGCTACCGCTCTCGTTGAGGCCTACGTCCCCACGCCCGCAA CCGAGGGAGACCTGCGCTGCATCGAGGAGAGACAGCTGCGGCACAAGGCG GGGGCGTCGTCTAGGTCTATGGGCGTTTCCCCTAACCCCTGCCGACACGG CTTTCCGCAGGCGTTTGCTTTCGACCCCTGCGGACACAAGGTGTCCTCGG GGCTCTTCCGGCTGTCGTGCCCTCTACTGGTGCAGGCCATCGATCTGCTG GAGGACGAGGGGGGGATAGAGGACGTCAATGCAAGGCTGGCCAGCGAAGA GGGGCTCCGCGAGGACTTCATGGCCGTGAACTTGGCGCACGGCATGCTGC GGAGACGTTTGGTGACTCCGGAAAAGCTGGGCATGGTAGAGGAGACTATC GGGAAGGAGGGGGCTGAACGCTTTCTCGACAGCGGCATTACAGGCGTCAC CACCGGGAAGGTGCGCGACGCAAAGTGCCTCCACGCGCACGTGGCGGACG CCCTCATGCGCGGCAGAAGCGCCAACGCGATCGGACGCGCGACGCTGGAG CTTCTCGAGGCCCGAGGGGTGCGGACGGACGGGGGCGACCGGTGCAGCGA GCAGTGCAACTATCGGGTGGAGGAGACGGCCGACAGCTGGAGGTATACGC CGCAGAAGAATAAACAGAAGCTTCAAATGAGAAAGGTGCGGCGAAAAGAC ATGAAAGCCTGCATCACCAATAAGGAGAGGGAGCAGGAGACCAAGGATGA TGCCGTCGTCGACGCCGATAGCGGCAGCGGCCTACCTCTCAACGGCGAGG CCACTGCCGCCAACAGCTACAAAAACAGCTGGACCGGTAGGAATAGCATC AGAACACGCGGCGACACCGTCGTGAAACACGATACCACTGGTGGTACTGG CAAACCCGGCGATGGTGAAATGGAAAGAGGCCATGGGACGATGCGGGTGG AGAGGACCCTGTGGCTATGCGATGACGATAGCGTCCTTCCGGTCTTAAGA AAGGCTCAGGGTGACGGTTTTCTCCTGTGA back to top
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