EsuBft841_4a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft841_4a-0001
Unique NameEsuBft841_4a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_389contigScaffold_389:281771..289234 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D8LLU7
ProteomeIdEsuBft841_4
Protein domainsIPR011989
Protein domainsIPR016024
Protein domainsPTHR10527
Ownerapollo_admin@sb-roscoff.fr
Notetransportin-1 os:mus musculus gn:tnpo1 pe:1 sv:2 [Automatic annotation]
Nb exon5
Max annot lvl2759|Eukaryota
Length5056
Hectar predicted targeting categoryother localisation
Evalue5.78e-93
EggNOG OGsKOG2023@1|root,KOG2023@2759|Eukaryota
Date last modified2016-06-15
Date creation2016-06-15
Preferred nameTNPO1
KEGG koko:K10265,ko:K18727,ko:K18752
KEGG TC1.I.1
GOsGO:0000060,GO:0000166,GO:0000278,GO:0000280,GO:0001882,GO:0001883,GO:0002164,GO:0002376,GO:0002520,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0005929,GO:0005933,GO:0005934,GO:0005935,GO:0006606,GO:0006607,GO:0006610,GO:0006810,GO:0006886,GO:0006913,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007049,GO:0007275,GO:0008104,GO:0008139,GO:0008150,GO:0008565,GO:0009791,GO:0009892,GO:0009894,GO:0009987,GO:0010458,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0010970,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016441,GO:0016458,GO:0017038,GO:0017076,GO:0019001,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0022613,GO:0022618,GO:0030030,GO:0030031,GO:0030097,GO:0030427,GO:0030705,GO:0031047,GO:0031090,GO:0031224,GO:0031323,GO:0031329,GO:0031503,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032386,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033157,GO:0033218,GO:0033365,GO:0034399,GO:0034504,GO:0034613,GO:0034622,GO:0035166,GO:0035167,GO:0035194,GO:0035195,GO:0035280,GO:0035639,GO:0035735,GO:0036094,GO:0040029,GO:0042073,GO:0042277,GO:0042306,GO:0042886,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043487,GO:0043488,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044782,GO:0045184,GO:0045595,GO:0045596,GO:0046822,GO:0046907,GO:0048285,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048542,GO:0048569,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0051049,GO:0051093,GO:0051147,GO:0051148,GO:0051169,GO:0051170,GO:0051171,GO:0051179,GO:0051223,GO:0051233,GO:0051234,GO:0051252,GO:0051641,GO:0051649,GO:0060255,GO:0060271,GO:0060341,GO:0061013,GO:0061608,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070201,GO:0070727,GO:0070922,GO:0070925,GO:0071702,GO:0071705,GO:0071826,GO:0071840,GO:0072594,GO:0072686,GO:0080090,GO:0090087,GO:0097159,GO:0097367,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0140014,GO:0140104,GO:0140142,GO:1900180,GO:1901265,GO:1901363,GO:1903047,GO:1903311,GO:1903827,GO:1904589,GO:1990023
Descriptionribosomal protein import into nucleus
COG categoryK
BRITEko00000,ko03009,ko03019,ko04121
Cross References
External references for this mRNA
DatabaseAccession
GO0031227
GO0010305
GO0010540
GO0006606
GO0009825
GO0005622
GO0005975
GO0009933
GO0009956
GO0005515
GO0009965
GO0016070
GO0008565
GO0005829
GO0016043
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft841_4aEsuBft841_4aEctocarpus subulatus male Bft15bgeneScaffold_389 281771..289234 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft841_4a-0001EsuBft841_4Ectocarpus subulatus male Bft15bpolypeptideScaffold_389 281864..284808 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft841_4a-0001-exonagat-exon-9343Ectocarpus subulatus male Bft15bexonScaffold_389 281771..281929 +
EsuBft841_4a-0001-exonagat-exon-9345Ectocarpus subulatus male Bft15bexonScaffold_389 282449..282600 +
EsuBft841_4a-0001-exonEsuBft841_4a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_389 283247..283361 +
EsuBft841_4a-0001-exonagat-exon-9346Ectocarpus subulatus male Bft15bexonScaffold_389 283763..283864 +
EsuBft841_4a-0001-exonagat-exon-9344Ectocarpus subulatus male Bft15bexonScaffold_389 284707..289234 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft841_4a-0001-exonagat-five_prime_utr-14332Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_389 281771..281863 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft841_4a-0001-cdsEsuBft841_4a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_389 281864..281929 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft841_4a-0001-exonagat-three_prime_utr-22173Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_389 284809..289234 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft841_4a-0001 ID=EsuBft841_4a-0001|Name=EsuBft841_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5056bp|location=Sequence derived from alignment at Scaffold_389:281771..289234+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCCGCCTCTCCCCCCTTCCCCTCACTACTCTCGTGTGTCTAACTCCA
GTTTTTGGAACAGTTGGTAAGGAACCTGTCGAGCGCCATCGAGATGCTGT
ACGTCTGCAACAACGCGAGCTGGGCCATCGGCGAGATTGCCAACGCGGTA
AACAGAGAGGTGGTAGCGCCCTGGGTGCCGGGGATCATGTCGAGGCTGGT
CGACATCATCGGTCAGAAGACCGCGGACCCGAAGCTGGTGGAGAACGTGT
GCATCACCGTGGGCCGGCTCGGCTCGGCATGTCCCGAGACCCTGGCCCCG
GATTTGCCAAGGTACTGCAGCGACTGGTGTGAGGGCCTTACGATGGTTCG
GGATCGGACCGAAAAGGAAGCGGCGTTTAAGGGGCTTTGCCTCGTCATCA
GGCACAACCCGTCCGGCATCCTTGATTCCTTGGGAAGCTTCTGCCGCGCC
GTGGGGTCCTGGCACGATCCCGATCCGGAGATGACGGTGCCCCCAGAGCT
GGCCGAGGCGTTTCAACAAATCCTGCAGACGTGCAAGACCCAAGCGGGGG
ACCGCTGGGTAGAGGCGATGAGGCGGGACGTGGCGTATGACCTCCACGAC
TACCTCGTCCGCACTTACCGTATCCAATGATGGCGATGCCTCTGCCCCAA
GGACTAGACTACCCCCCACCCCCCGCCCCCCTCTCTCACGCAAACCGAAC
GTACACCCCTACTTGCTTGATGGCCCGGCTGGTCACACCCGAACCGAGGA
GAACCTCGACGGCGCCGGAGGTGGCCGGGTTTGGTCTGGTTGTCTCAAAT
GTTGCCGTGTCGTCTGAAGACGTTTTTTCTCCGCAGTGTTTCGCCTCACA
CGGAAGCAAGCAAACAACAGGTAGGTAGGCGTTCGTTCACAAGGTCTGTC
TGTCTGCCTGGCTGTTTAGGTAAGGCCCCGAAAAGAGGGTGATTTTTCCC
TCCTTGCATGTCCCTAGTGGGGGGGGGGTTGTTCGCCAAGACCCGGCAGG
GGCTGCCAACGGGACTGATTTGATCGATGTTGTGAGTGTGTGAGTGTTGA
AGGAGACGATATTGCCCGGCTTTCTCTTGTCTCTCGCGTGTTAGTCTCTT
GCATGCATGCAGGGTCATTCCATTTCCTTCCATTGTTGCTGTATCGTCGG
GTGCATCATGTTCAGAGTCGTTTACAGTTAAGATTGTTGCGAGCTATTTT
CCCTCTACAACAGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GGGGGGGGGGGGGGGATTCCAGCATTTTTTTTATTCTTCTCTGTTTCTTA
TTCCTTTTTTTTCTTTTGCGCGATTCGGTCGGCAATTGAGGATCGTTTGG
CTTTTTGGGCGACAGACACCACGTCATCCAGTTTGCGAGGGAGGGCTTTA
TGGTTGTGGAGGGGGGACGGCGAATGCTAGCCATTTGGGCAGCCGCCGCC
GCTGCCTCCATCCCTCGCTAGGGTCATGTGTAGGGCGAGAGCTCGCGGGA
AGGGGGAGGGGAGGGGAGGGGGTTACCGTACCGGTCGGAGAGTGGTCAGG
CCGCGCTTAGATAGTAGCNAGGGCGAGAGCTCGCGGGAAGGGGGGGGGGG
GGGGAGGGGGTTACCGTACCGGTCGGAGAGTGGTCAGGCCGCGCTTAGAT
AGTAGCATGCGGCGGGGGGTTGTTGTTGTTGTTGTTCTTTTTGTTGTTGA
GTGCTTATTCTCTCTTAGCGCGGTACACGTCTCTATCGTGTGTGTGTAGT
GAATTTTACGAAAGGAGAATCAAAAGGGTAGAGGGAGTAGAGAAATCGGG
CTCACAAAATATCGCAAGACACATTTACGTACGTACTTTGTTCTATAGGC
AGCATCAGGCATCTTTTGTCTTGTGAAATGTCGTGATTTCTCGAGCGTGA
TTGTGGTTGTTGGGTGGGGGTGGGGGTGGGACGGGTCTGGGCATTCTTTT
TTTCGAGTTGAGGACCTCGGCGCTAGTGCGATTCTAGGCCCGTGATGGAT
TACGCATTAAGAGGGGCGAGGGGGGTCAGCTGTTGATCGCGTGGGCCCCA
AGTCAGGAGAGACAGAAACGTGTGCCAAACACACGACATCGAGAAGAGGG
CAGTATTCTGCAAAATTCAGAAAAACGTATGTAGCACTGCGCAGCATTCA
CCAATGTTAGTGGCGAGCGAGAGGAAAAGAAAGGATCGAGTCGATCGTCG
ATTTTTTTTTCTTCTCTTTGATTTACGCAGGAGTTGAGATAAAAAGGGAA
GAAACGTGGTACCCGAAAAGTAGAGTGATGTGGCCACGCACGAAAGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAG
GAGGGGGGGGGGCGGGGCGTGAGCGTGAATGTTGTGAAGTTTGTTGAAGT
GCAGACTTGGAAACAAGAGTGATCGACGCAAGTGACCTCTTGATCTGTCT
CTGTTTTGGGGGGGGAAACGTGGACGGGCATCAGCGTCGGTGTGCGGTGG
TAGGGCTAAGAATGGGCGCGTGGTTTGGCTGTTAGTTGTTGTCGGATGTC
GAAGAAGAACGGGCGGGAGCTTGTGTAGTGGTGCTCGCCCGTCTGGTGTA
GTCTGTCTGTACCAACCGCTCCCCCCGCCGTCGTTTCGTCGAGAGCCGAA
CTGGTTCGGCTTGTGGCGGTTTTGACGGCTTCTTCTCCACACGACGTAGC
CGTTTTTTTCGTTTTTTTCGTGTCGTATGTCGTGAGACATGTAAGCGTTG
TTCTAGCTTCTTTTTTTTTTTTGGTCCTTTTCGCTGGATTTTGGTTGGGC
AGTCAAGGTCGACATGTTTTTTTTTTGTACTATTCTTTTTTTTGCTTCTC
GTGCTTGATGTCATGTCTTATTTGGTCGTAGCGGCAGCAGCAGCAGCAGC
GCGTGATGATACACGGCGCGCGGTGTAGTTTGTGTTGCGGTGAGACTCGT
TGCTCAGTCGTCTCAGTCGTGCTTTGCCACGCCACAACGAACAAACGATA
CTTTTTGATCTTTCACCCGCGCGCGAGAGGCACGCGTTCGTACGTACGTC
GTGGACTCGCATCTCNCCCCCCCCACTCGCGATCAGGCCGCTCGGCTGTA
GGGAGGGTGCTGTGTGTGACGAAAAGCGGGGGGGGGGGGGGTCAAACGTC
GCGGCGAGCGAACGAATGAATGAATGCGCTTGTTGCTCAAGAATATTTAT
GTATGGCCGGCCGGTGCTTGGGTGCGCTGCTGATGTTTGTAGCATCATAC
GCATGGGCAGCCAGCCAGCCGGCTGCGTTTCGGAGTCGAGGAGGGGGGAG
AGAAGATGAACAGAAAGGGTAACACATGTACCGCGGTCGGGCAGATTTTG
GTTTTATCTGCTTCAGTTGTTTTTGTGCACCGCTGCATGCGTTCGTCCGT
TTTTCTCTATCGTGTGGATCGCTTTTGCTCGGAGCACNGGGGGGGGGTGT
ACTCATAGTCGTGCATGCCGTAGTCGTTAGACCATTGACCTCGCATCCCT
ACAAAGCCGGGACGGAGCACGCCGGGTTCTCACCGGACCAGGGGGGGGGT
ATTTGCAGTAGTAGGACATGGGTTGGACACCTGCTCTACTAAAAAAAAGG
GTAGGGGATAGCGAGCTAAACAAAGGTCTCGGAACAAACGAATCATATTA
ATCGGCAAACAGGAGCAGAGGCGGGTTTATTGTTGTCTGAATTGCTACTG
CTGCTGCTGTGAGCTCATGTGTTGTCTTGAGCGCTACTTTTTTTTCCATG
GGGAGGGTGTGTTTGATGAACAAGTTAGGGTGCGCGAGCGGTAGGGATAG
TAGTAGTGGATGTGCTCGGGAGCCATACCCCCAAGTGTCTTCGGGGCGGG
CGGAAGGAAGGAAAGAAGGCAACGGGGACGCAGTTGCGGATGAGGGGGGA
GGGTATTCGGGGAGTGAGCGGCTCTCCCTGTGGCGTCGTTAGTCCGACGA
AGCACCGGGGAGAATTGACTCAATCTCACGGCGAAGCGGCTACGCTTTCC
CCCGGTGTTATTGGGTTTTTGCGTGTGTTTGTGCGTGTGCTCGCTCGTCG
GTTGAAAACAGGTGCTAGGTGGTTGGTCTCTTCTGACTAGCGCGTAACTG
TAGGTACGTTTATCCTGTACTTTTAGCAGGGGGAGTGTCGGCAGCGGCGG
CATCTCTCTCCCCCCGTGTTTGTTGGGCAATGTAGCGGGCAAGAGTGGCT
GGGCAGGTACGTAAGGTAGGTGTAGTTTTGGGTGCTGGGTTGGGAGAGAA
AGAGAGTCAGGCAGCAGCACCGCTGCTGCGTGTAACAACAGCTGGTAGCC
GATCGGTCGCTTTCTTTTCAATTATCCTCTTGACGTTGTAGTTGTTGCTG
TTGTTCAGGGAGGCTGACTGACTTGTTCGTTGTGTTTGGACACACGGCAC
AAGGAGGAAAAACAAACAAGAAGTAGTAGTAGCGCGTAGATTCCGGGCGG
TGTCTGGCTGGTGGCAGGTCTTCCTCAGTGCGTGCCTGCTGGCGCGTGGG
TCTTCTTGTCTGCCCTTGTTTAGTGTTTCATTAGTTGAAGCAATGGTTGG
GTTGTGTGTTTTGTTTTTTTATGAGATACCGGAGCTAGTAGCTGTTGCTG
CCGCTGCTCGTTTGGTTGATTCTTATTGTTGTCTCACGCTGCTCTTGCTT
GCTGCGCGGAAGGCAAATCAATCAATAAGTACTTGCGGAGTGAGTCGTGG
CAGAGAGACATTGTAGTGCGGTGAAATAACGCAAGATGTGGAAGTGGCGC
TCGCTGCTGTTGCTGGGTGATGACGCAGTCTGGGCACAACACGACATCGG
TCCAGATTAGATGATGATGCGAGACCCGAACTCTCGTCACGCGCGAACGA
CCTTCGTCCCATCGTTGTTGACAGACGTTTTCCACGGGATGGCTGACGAT
GGTTTCAAGCGTCTGGTGGCATCCAATGCTGCTGTGCTGTATTGTTTGTG
CCGGGT
back to top

protein sequence of EsuBft841_4a-0001

>EsuBft841_4 ID=EsuBft841_4|Name=EsuBft841_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=178bp
MLYVCNNASWAIGEIANAVNREVVAPWVPGIMSRLVDIIGQKTADPKLVE
NVCITVGRLGSACPETLAPDLPRYCSDWCEGLTMVRDRTEKEAAFKGLCL
VIRHNPSGILDSLGSFCRAVGSWHDPDPEMTVPPELAEAFQQILQTCKTQ
AGDRWVEAMRRDVAYDLHDYLVRTYRIQ
back to top

mRNA from alignment at Scaffold_389:281771..289234+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft841_4a-0001 ID=EsuBft841_4a-0001|Name=EsuBft841_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=7464bp|location=Sequence derived from alignment at Scaffold_389:281771..289234+ (Ectocarpus subulatus male Bft15b)
ATGTCCGCCTCTCCCCCCTTCCCCTCACTACTCTCGTGTGTCTAACTCCA GTTTTTGGAACAGTTGGTAAGGAACCTGTCGAGCGCCATCGAGATGCTGT ACGTCTGCAACAACGCGAGCTGGGCCATCGGCGAGATTGCCAACGCGGTA AACAGAGAGGTGCGTTAATTCGCGTTGGGATGGGCTCCACGGTCTTAACT GTCTTTGCACTCAAAACTAAAGTAAAATAAAACAAACGGCGTATTTCCTT TATCTAGTGTCTATGATAGATGGTTTTTCCTCGTCTCTTTTTAAACACAT GTGGCACATTATTTTCATCGTGGCTTCATGGGCGCTTGGTTGAGTGGCTT GCTTTTGTCGTCGTTTGTTTGTTCTCCGCGCGGTTCTTTTTCTGTTGTCG TTCATGACCCGGACGACCTACCCCAACCTGCTACGATCGAGCTGTCAACC ATGCTGTTGACACCTCTAATGCCACCCCCACTACGCCGCCACCTCCATTG CCTCCCCCTGTGGTTGCCCCTGTTGCTGTGGTTTTTGTTCCACGTGCCCT GGGTGCCCCCTCGAAGTGACCGCCGTTGACACGTGGTTGCGTTTGTTGAA CAACCCCCCCTCCTCCCCCCTCCCCCCGGCTACCGTTGACGTGTCATGGT TGAACTTGTTGAACACCACCGCCACCAGGTGGTAGCGCCCTGGGTGCCGG GGATCATGTCGAGGCTGGTCGACATCATCGGTCAGAAGACCGCGGACCCG AAGCTGGTGGAGAACGTGTGCATCACCGTGGGCCGGCTCGGCTCGGCATG TCCCGAGACCCTGGCCCCGGATTTGCCAAGGTACGTAAATACTGGGCAAT AATAGGCGTTTGGTTGTTACTTTTTTTTTTGCATTGTACGTTATATCTTC CCCAAACCGTCGCCGTTGACCAGCTCCGTTTGTCTTAAGACCCTTGCCCG TATTTGCTAAGATATGCTTGACGCGTGTTTATGAAGTCAGTTTTTTTTCT TCGTAAGTCTTCCCGAAACGAGAAATTTAGAAATTTGGTTGCATTGACAG CTGTTTCTTACCCTTTTTTTTGTCACGTTGCATCAGAAGTTCCGTGGTTT CTGTCGTGCAAGGTAATTTGTCTTCATGTTGCTGCCCCCGCCCCCGCCCT GCTTTATGATCCTGTGATGATCTTGTGCTGATCTTGTGATGAGCTCGTGC TGAACATCACCCACAAGAACATCCAAGGTGTGTTGGTTAGTGATCTACCT TTCTCCTGCGTGACCCAACTGGCGCCCGGAATAGATGGGACGAAAACGAC ACACACCACTTGGTACACACCGGATGGAATATGAACCTCTCTCTCCCTTT TTTCCTCTCTTCCTTTCTCTTCTCCCTTTCCCTCCCTCCGTCCCTCTTTT TGTGTGTTTCTCTGTCGGTCTGCGTATGTCTCTCTGTCTGTCTCTGTCTC TGTCTTCGTGTGTTGGTTGCATGCAGGTACTGCAGCGACTGGTGTGAGGG CCTTACGATGGTTCGGGATCGGACCGAAAAGGAAGCGGCGTTTAAGGGGC TTTGCCTCGTCATCAGGCACAACCCGTCCGGCATCCTTGATGTGAGTACC GAGCATCAAAAATTGAAAGTAGGTTGTTGTTGCTCTTGTATTTTTCGTTC TTGGTTGCTGTTGGTGTCCTTTACCATAGTTGTTTTTGTTGTTGCTGTTT TCCTGTTCCTGTTGCTGTTGCTGTTGTCCTTGGATTGATTGTTCTCGTCG ATGTTGCGATGGTGGCATGTGTGAGCAGGGGGTGGCGCCCCGCCGCCGGT GAAAACACCCCGCTCGAGAAAGCATCCCGCCCGCAGAAAACAGTCTCCAT GTTGCAGAGGCCCTCATGACCGCAACCCATGCCATCGTAACCCTCCCGTT TTCTGTCGGTGTATTGTACTCTCGATGCACGGTTAAACGTCGCACGGCTG GACGGGACGATTAAACGTTAACTTTGCTTTGTTCTGTTTCAGTCCTTGGG AAGCTTCTGCCGCGCCGTGGGGTCCTGGCACGATCCCGATCCGGAGATGA CGGTGCCCCCAGAGCTGGCCGAGGCGTTTCAACAAATCCTGCAGGTGTGT GTTGTGTCGCACGTGCGTCTTTGTGTGTTCGTCCCCTTGTATTCTGGCGC CGGTTTTTACAGGCCTTTGCATGTGTACCTGACGTATCAGCCGGCGTCAC ACAGTAGGAAGGTCACACAGGCGCTTTTTTTTCTTTTTTCTGTTTCACCT TTCCGTTCCCCCTGCGGTGCTTGCCTTAGCTTTGGAGTCAGTTATGCGTG TGGCGATCAACCAAGCTCTTCACACACACCGTGTTTCGTGGGTTGGCATC AACCGCGCCATTTTGTTGCCCCAGGACCGATCACCGATGGCCATTTCGTT CCTTCCTACTTTGCCAAAGGCACTGGAATTTGTTTTGCCAACCCTACATG TTCTATCGACATCGCTTCCCGTCGGGGAGGGAGGGGGTTAACCTTCTGAA GAAGAGACAACGAACCTTTAACTTGCGTCAGCCTTCGTTTTAATAGTGTA CGTACTATTTTTTTTTTCATGCATGTGGAAACAACCACTTGTGCATTGCT TCATCGCAGTTGGTGATGTATGTGTAACGGGCGCATGTTAGTACTTGATT TCGTGTATGCACGCGGAAACAAGCACGTGTGCATTGTGTCATCACAGGCA GTGATGTGGTCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCGTGCGCTGTA TCTCATTCTTCACCACCCACCCCCGACTCTCCACAGACGTGCAAGACCCA AGCGGGGGACCGCTGGGTAGAGGCGATGAGGCGGGACGTGGCGTATGACC TCCACGACTACCTCGTCCGCACTTACCGTATCCAATGATGGCGATGCCTC TGCCCCAAGGACTAGACTACCCCCCACCCCCCGCCCCCCTCTCTCACGCA AACCGAACGTACACCCCTACTTGCTTGATGGCCCGGCTGGTCACACCCGA ACCGAGGAGAACCTCGACGGCGCCGGAGGTGGCCGGGTTTGGTCTGGTTG TCTCAAATGTTGCCGTGTCGTCTGAAGACGTTTTTTCTCCGCAGTGTTTC GCCTCACACGGAAGCAAGCAAACAACAGGTAGGTAGGCGTTCGTTCACAA GGTCTGTCTGTCTGCCTGGCTGTTTAGGTAAGGCCCCGAAAAGAGGGTGA TTTTTCCCTCCTTGCATGTCCCTAGTGGGGGGGGGGTTGTTCGCCAAGAC CCGGCAGGGGCTGCCAACGGGACTGATTTGATCGATGTTGTGAGTGTGTG AGTGTTGAAGGAGACGATATTGCCCGGCTTTCTCTTGTCTCTCGCGTGTT AGTCTCTTGCATGCATGCAGGGTCATTCCATTTCCTTCCATTGTTGCTGT ATCGTCGGGTGCATCATGTTCAGAGTCGTTTACAGTTAAGATTGTTGCGA GCTATTTTCCCTCTACAACAGGGGGGGGGGGGGGNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNGGGGGGGGGGGGGGGATTCCAGCATTTTTTTTATTCTTCTCT GTTTCTTATTCCTTTTTTTTCTTTTGCGCGATTCGGTCGGCAATTGAGGA TCGTTTGGCTTTTTGGGCGACAGACACCACGTCATCCAGTTTGCGAGGGA GGGCTTTATGGTTGTGGAGGGGGGACGGCGAATGCTAGCCATTTGGGCAG CCGCCGCCGCTGCCTCCATCCCTCGCTAGGGTCATGTGTAGGGCGAGAGC TCGCGGGAAGGGGGAGGGGAGGGGAGGGGGTTACCGTACCGGTCGGAGAG TGGTCAGGCCGCGCTTAGATAGTAGCNAGGGCGAGAGCTCGCGGGAAGGG GGGGGGGGGGGGAGGGGGTTACCGTACCGGTCGGAGAGTGGTCAGGCCGC GCTTAGATAGTAGCATGCGGCGGGGGGTTGTTGTTGTTGTTGTTCTTTTT GTTGTTGAGTGCTTATTCTCTCTTAGCGCGGTACACGTCTCTATCGTGTG TGTGTAGTGAATTTTACGAAAGGAGAATCAAAAGGGTAGAGGGAGTAGAG AAATCGGGCTCACAAAATATCGCAAGACACATTTACGTACGTACTTTGTT CTATAGGCAGCATCAGGCATCTTTTGTCTTGTGAAATGTCGTGATTTCTC GAGCGTGATTGTGGTTGTTGGGTGGGGGTGGGGGTGGGACGGGTCTGGGC ATTCTTTTTTTCGAGTTGAGGACCTCGGCGCTAGTGCGATTCTAGGCCCG TGATGGATTACGCATTAAGAGGGGCGAGGGGGGTCAGCTGTTGATCGCGT GGGCCCCAAGTCAGGAGAGACAGAAACGTGTGCCAAACACACGACATCGA GAAGAGGGCAGTATTCTGCAAAATTCAGAAAAACGTATGTAGCACTGCGC AGCATTCACCAATGTTAGTGGCGAGCGAGAGGAAAAGAAAGGATCGAGTC GATCGTCGATTTTTTTTTCTTCTCTTTGATTTACGCAGGAGTTGAGATAA AAAGGGAAGAAACGTGGTACCCGAAAAGTAGAGTGATGTGGCCACGCACG AAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGAGGAGGGGGGGGGGCGGGGCGTGAGCGTGAATGTTGTGAAGTTT GTTGAAGTGCAGACTTGGAAACAAGAGTGATCGACGCAAGTGACCTCTTG ATCTGTCTCTGTTTTGGGGGGGGAAACGTGGACGGGCATCAGCGTCGGTG TGCGGTGGTAGGGCTAAGAATGGGCGCGTGGTTTGGCTGTTAGTTGTTGT CGGATGTCGAAGAAGAACGGGCGGGAGCTTGTGTAGTGGTGCTCGCCCGT CTGGTGTAGTCTGTCTGTACCAACCGCTCCCCCCGCCGTCGTTTCGTCGA GAGCCGAACTGGTTCGGCTTGTGGCGGTTTTGACGGCTTCTTCTCCACAC GACGTAGCCGTTTTTTTCGTTTTTTTCGTGTCGTATGTCGTGAGACATGT AAGCGTTGTTCTAGCTTCTTTTTTTTTTTTGGTCCTTTTCGCTGGATTTT GGTTGGGCAGTCAAGGTCGACATGTTTTTTTTTTGTACTATTCTTTTTTT TGCTTCTCGTGCTTGATGTCATGTCTTATTTGGTCGTAGCGGCAGCAGCA GCAGCAGCGCGTGATGATACACGGCGCGCGGTGTAGTTTGTGTTGCGGTG AGACTCGTTGCTCAGTCGTCTCAGTCGTGCTTTGCCACGCCACAACGAAC AAACGATACTTTTTGATCTTTCACCCGCGCGCGAGAGGCACGCGTTCGTA CGTACGTCGTGGACTCGCATCTCNCCCCCCCCACTCGCGATCAGGCCGCT CGGCTGTAGGGAGGGTGCTGTGTGTGACGAAAAGCGGGGGGGGGGGGGGT CAAACGTCGCGGCGAGCGAACGAATGAATGAATGCGCTTGTTGCTCAAGA ATATTTATGTATGGCCGGCCGGTGCTTGGGTGCGCTGCTGATGTTTGTAG CATCATACGCATGGGCAGCCAGCCAGCCGGCTGCGTTTCGGAGTCGAGGA GGGGGGAGAGAAGATGAACAGAAAGGGTAACACATGTACCGCGGTCGGGC AGATTTTGGTTTTATCTGCTTCAGTTGTTTTTGTGCACCGCTGCATGCGT TCGTCCGTTTTTCTCTATCGTGTGGATCGCTTTTGCTCGGAGCACNGGGG GGGGGTGTACTCATAGTCGTGCATGCCGTAGTCGTTAGACCATTGACCTC GCATCCCTACAAAGCCGGGACGGAGCACGCCGGGTTCTCACCGGACCAGG GGGGGGGTATTTGCAGTAGTAGGACATGGGTTGGACACCTGCTCTACTAA AAAAAAGGGTAGGGGATAGCGAGCTAAACAAAGGTCTCGGAACAAACGAA TCATATTAATCGGCAAACAGGAGCAGAGGCGGGTTTATTGTTGTCTGAAT TGCTACTGCTGCTGCTGTGAGCTCATGTGTTGTCTTGAGCGCTACTTTTT TTTCCATGGGGAGGGTGTGTTTGATGAACAAGTTAGGGTGCGCGAGCGGT AGGGATAGTAGTAGTGGATGTGCTCGGGAGCCATACCCCCAAGTGTCTTC GGGGCGGGCGGAAGGAAGGAAAGAAGGCAACGGGGACGCAGTTGCGGATG AGGGGGGAGGGTATTCGGGGAGTGAGCGGCTCTCCCTGTGGCGTCGTTAG TCCGACGAAGCACCGGGGAGAATTGACTCAATCTCACGGCGAAGCGGCTA CGCTTTCCCCCGGTGTTATTGGGTTTTTGCGTGTGTTTGTGCGTGTGCTC GCTCGTCGGTTGAAAACAGGTGCTAGGTGGTTGGTCTCTTCTGACTAGCG CGTAACTGTAGGTACGTTTATCCTGTACTTTTAGCAGGGGGAGTGTCGGC AGCGGCGGCATCTCTCTCCCCCCGTGTTTGTTGGGCAATGTAGCGGGCAA GAGTGGCTGGGCAGGTACGTAAGGTAGGTGTAGTTTTGGGTGCTGGGTTG GGAGAGAAAGAGAGTCAGGCAGCAGCACCGCTGCTGCGTGTAACAACAGC TGGTAGCCGATCGGTCGCTTTCTTTTCAATTATCCTCTTGACGTTGTAGT TGTTGCTGTTGTTCAGGGAGGCTGACTGACTTGTTCGTTGTGTTTGGACA CACGGCACAAGGAGGAAAAACAAACAAGAAGTAGTAGTAGCGCGTAGATT CCGGGCGGTGTCTGGCTGGTGGCAGGTCTTCCTCAGTGCGTGCCTGCTGG CGCGTGGGTCTTCTTGTCTGCCCTTGTTTAGTGTTTCATTAGTTGAAGCA ATGGTTGGGTTGTGTGTTTTGTTTTTTTATGAGATACCGGAGCTAGTAGC TGTTGCTGCCGCTGCTCGTTTGGTTGATTCTTATTGTTGTCTCACGCTGC TCTTGCTTGCTGCGCGGAAGGCAAATCAATCAATAAGTACTTGCGGAGTG AGTCGTGGCAGAGAGACATTGTAGTGCGGTGAAATAACGCAAGATGTGGA AGTGGCGCTCGCTGCTGTTGCTGGGTGATGACGCAGTCTGGGCACAACAC GACATCGGTCCAGATTAGATGATGATGCGAGACCCGAACTCTCGTCACGC GCGAACGACCTTCGTCCCATCGTTGTTGACAGACGTTTTCCACGGGATGG CTGACGATGGTTTCAAGCGTCTGGTGGCATCCAATGCTGCTGTGCTGTAT TGTTTGTGCCGGGT
back to top

Coding sequence (CDS) from alignment at Scaffold_389:281771..289234+

>EsuBft841_4a-0001 ID=EsuBft841_4a-0001|Name=EsuBft841_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=537bp|location=Sequence derived from alignment at Scaffold_389:281771..289234+ (Ectocarpus subulatus male Bft15b)
ATGCTGTACGTCTGCAACAACGCGAGCTGGGCCATCGGCGAGATTGCCAA
CGCGGTAAACAGAGAGGTGGTAGCGCCCTGGGTGCCGGGGATCATGTCGA
GGCTGGTCGACATCATCGGTCAGAAGACCGCGGACCCGAAGCTGGTGGAG
AACGTGTGCATCACCGTGGGCCGGCTCGGCTCGGCATGTCCCGAGACCCT
GGCCCCGGATTTGCCAAGGTACTGCAGCGACTGGTGTGAGGGCCTTACGA
TGGTTCGGGATCGGACCGAAAAGGAAGCGGCGTTTAAGGGGCTTTGCCTC
GTCATCAGGCACAACCCGTCCGGCATCCTTGATTCCTTGGGAAGCTTCTG
CCGCGCCGTGGGGTCCTGGCACGATCCCGATCCGGAGATGACGGTGCCCC
CAGAGCTGGCCGAGGCGTTTCAACAAATCCTGCAGACGTGCAAGACCCAA
GCGGGGGACCGCTGGGTAGAGGCGATGAGGCGGGACGTGGCGTATGACCT
CCACGACTACCTCGTCCGCACTTACCGTATCCAATGA
back to top