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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D8LTP7 |
| ProteomeId | EsuBft832_10 |
| Protein domains | TMhelix |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | Coil |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Protein domains | SIGNAL_PEPTIDE |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 4 |
| Max annot lvl | 2759|Eukaryota |
| Length | 217 |
| Hectar predicted targeting category | signal peptide |
| Evalue | 5.61e-13 |
| EggNOG OGs | COG0515@1|root,KOG0192@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Preferred name | RIPK4 |
| KEGG ko | ko:K02861,ko:K08846,ko:K08847,ko:K08848,ko:K16289 |
| KEGG Pathway | ko04064,ko04210,ko04217,ko04620,ko04621,ko04622,ko04623,ko04668,ko04722,ko05131,ko05152,ko05160,ko05169,map04064,map04210,map04217,map04620,map04621,map04622,map04623,map04668,map04722,map05131,map05152,map05160,map05169 |
| GOs | GO:0002009,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009653,GO:0009888,GO:0009889,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0044093,GO:0044424,GO:0044464,GO:0048518,GO:0048729,GO:0048856,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051252,GO:0060255,GO:0060429,GO:0065007,GO:0065009,GO:0080090,GO:1903506,GO:2000112,GO:2001141 |
| EC | 2.7.11.1 |
| Description | protein kinase activity |
| COG category | KLT |
| BRITE | ko00000,ko00001,ko01000,ko01001 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft832_10a-0001 ID=EsuBft832_10a-0001|Name=EsuBft832_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2171bp|location=Sequence derived from alignment at Scaffold_389:786004..790898+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CTGGATTCTTGTCAACATCTCACTGATGCACCCGTGGGGACAACACCTCC CACGTCACCTCCCACATCAACTCCTGCACTACTGCCGACCTCGTCGGGAT TCACTGATGCCCTCGTGGGGACACCACCTCCGACGTCACCTCCCACACCA CCCCCTACACTACCGCCGACTTCATCGGATTTCACCAATACGCCGGAGGG GCGCCCACCTCTTGCCTCCTTGGGCAAGATATTCAACTGTGTTTCTTGGG TGTTTTGAGCACCCAGTGTTTTGCGGTTCTCCCAGCAGCCGGTGACAGTG TGGTCTGCTTATGTTGTCGCCGCCTCTTCCCTGTCCTGCGTTGTGATTAT ATTCCAGACGCCCCAGTGTCGCCGACGTCTCCAACACCCGTTTCACTATC CTCACTGCCCGACAATCCCGCCATTAGCACCGCCGCGCCCTCCTCATCAG GAACAATGACCGCGCCCACATCAGCTGCAGACAATGAGCGGCTCGATCAG CGGAGCTTTACTTGTTGGCGCGCTCGCCTATTGCTTTTGCCTTGGTCGTA AAAGAAAGAGACGAAAACAACACAGCCCTGTGCAACGAGATGTGGATTCA GCAGAGCTACCGACGTACGAAGAAGCGTCTGCTCTAGCTAGGGCACTTAT TTCGCTGTCGAACGATGGCGCGGTAACCATGGACAATACACCTGAGATGA AGGTCTTGCAGAGACTTTCCGACTCGCAGCGATCTCAGAACACCGATGGG ATACGAGCAGGGTCAACGCTGACGTCTCTGTCTGAGGACGAACCGATCGG CGAGGGGTGTGGGGGGCGAATTTCGGTGATGAAGGATGCCTTGAGCGCTG TGGTGGATTCGGCCCGAGCGGTCGCGGAAAAGTCGTCCATGCCTTTCGTG CCCGAGATTGCATCATTCTTGGCAGTGCTGGCTTCCTTATGCAGCAACTT CGGTGGCAACGAGCAAAACATGCCGAGGACGGTTCGGTGGTGTGGATCTA TGCTGGAAATGCTTGACCAAAGCAGCATTCACATGGATGATTCTGGGCCA GTGACAGAACTTCTCGAGGAAGTTCGCGATGCAATTGCCGAGATCGTGAA GGAGCGCCAAGAAACCGCCAAGACCGGTCTACGGGATGCGCTACAACGCC TCCAGACAGGCGTTGCCTTTGTCTCCATGAATGTGCTTCACCGCACCTCA ACCAGCGTCGATAGTTTGGCAAGGAGAGTCGGGCCCGAGGGACATATTTC TCGGAAGGAGCGAAAGAAGAGGATGATGGAGTGCCACGAGATACCTTCTG GCGAGGTGATCTGCTTCGACGACATGATCTTGGGCACGGGGGGCTATTCC ACAGTGCAGCTTGTGGGGTACCAAGAAACAGCTGCCGCAGCAAAGCTGAT GCAACCGAAAAGATGACCAAGATGTTCGTGAACGAGCTGCACGCCATGAT GGAGCTACGGTCGCAGCACACGGTCAGCATCTTCGGTGCCGTCACCTCCG TTCCGGGGAAACTGGTGCTCATCATGGAATAAATGGAAGGCGGCGATCTG CGGGCTTTTCTCAGTGCGGCAAGCGATCCGCTCGAGAGCCGGGTCGAGAA TGGCCTGGCTTGCGACATCGCCGAAGGGATGCAGTTTTTGCACTCAAAAA AAGCTTTTCATGGTGACCTGAAGTCTCCGAATGTGCTCCTAACCAGGGAC AACAGAGCCAAGATTGCAGATTTCGGCACCGCTCGAACCATCGAAGAGAT CGCGTCAATGGCCACGAGGGGGGGGACTTTGTGCCAGTACGGCACGACCC TCAAGTGGGCCGCCCCCGAAGTGCTGAACGACGAACCTTTGCGGGCTGAA AGCGACGTATACAGCTTTGGCGTGATTGTCTGGGAGATTGTCAGCCGGCA GGTGCCTTGGCAAGACGCCAGTCTGAAGGAGATCTTGGTGAAAGTGTGCA GGGGGAAGCGTCCTGAGATACCGGCAGAAGCACCGCCGCTCCTGGCATCG TTGATCGCGCAGTGTTGGACAACCGTCCCAGAGGATCGAATTCCTTTCAA ACAGGTGCTAGCTGTGCTCAAGATGTAAACGGCCAGGCTCCCCCACGCAA GGGTTGTTAGTTAAGACATGGGTGGGGCGTTTGCTGTCGAAATAACCACA AGAACCTGGAGCTTTAGTAGC back to topprotein sequence of EsuBft832_10a-0001 >EsuBft832_10 ID=EsuBft832_10|Name=EsuBft832_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=310bp
MSGSISGALLVGALAYCFCLGRKRKRRKQHSPVQRDVDSAELPTYEEASA LARALISLSNDGAVTMDNTPEMKVLQRLSDSQRSQNTDGIRAGSTLTSLS EDEPIGEGCGGRISVMKDALSAVVDSARAVAEKSSMPFVPEIASFLAVLA SLCSNFGGNEQNMPRTVRWCGSMLEMLDQSSIHMDDSGPVTELLEEVRDA IAEIVKERQETAKTGLRDALQRLQTGVAFVSMNVLHRTSTSVDSLARRVG PEGHISRKERKKRMMECHEIPSGEVICFDDMILGTGGYSTVQLVGYQETA AAAKLMQPKR back to topmRNA from alignment at Scaffold_389:786004..790898+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft832_10a-0001 ID=EsuBft832_10a-0001|Name=EsuBft832_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4895bp|location=Sequence derived from alignment at Scaffold_389:786004..790898+ (Ectocarpus subulatus male Bft15b) CTGGATTCTTGTCAACGTAGGTGTAGTCTACCACCTTCTGTTAGTTGACG
CGCACCACACCCAAGTTACATGACTCACCCGGAATGTGTTAGACCGGCCA
GTACCCTGTGTTTCAATTTTCTGTCGGCAAATCATACAAACAAGCGCTCG
TAGCGGTGGACTCGTATCCAAACACAAGCACACCACCCGTTTTGCTCACG
ATGTGCGCATCGTGTGGGTGCGCAGATCTCACTGATGCACCCGTGGGGAC
AACACCTCCCACGTCACCTCCCACATCAACTCCTGCACTACTGCCGACCT
CGTCGGGTAAGGGACCGACCCGGGAATACTGAATTATTGGCGACGTAGCT
TTTGTCGATCACCTTCTGTTTGCTGTCGCGCACCACACGCAAGCACCTTG
ACTTACCCGAAACGTGTTAGGCCAGTATCATGTATTTCAATTTTCCTGTA
TGCAAATCATACAAATGCTCGCAGCGATGGCTTCGTTTCCAAACACTAAT
ACAGCACCCTTGTCGCACACGCCGTGCGCGTCGTGTGCGTGCACAGGATT
CACTGATGCCCTCGTGGGGACACCACCTCCGACGTCACCTCCCACACCAC
CCCCTACACTACCGCCGACTTCATCGGGTAAGTGATAAACTCGGAAACGG
TCGGAGTACAGGACTGACATTGCTTTGGCACGACCTGCTCGAATAGTCGC
CAAATGTTGGTTTCACCATGCTCTTTTGTTGTCGCTAAACAACGCTTTAC
TTCTAACCACCCGTGTAGCTCCTGCTATGCGCATCATTTGCTTGCATAGA
TGTAGCTGGTCATCCTCGGGGACACCACCTTGTACACCACCTGTTGCTTT
GTTATTGCCGCCTTCTGTGGCTGTCACCAACTTCAACTCTTTTAACGTGT
ACCACCCGCGTCCCCCCAACCGTGCGCGTTGTGGGTGCTCGTAGATTTCA
CCAATACGCCGGAGGGGCGCCCACCTCTTGCCTCCTTGGGCAAGATATTC
AACTGTGTTTCTTGGGTGTTTTGAGCACCCAGTGTTTTGCGGTTCTCCCA
GCAGCCGGTGACAGTGTGGTCTGCTTATGTTGTCGCCGCCTCTTCCCTGT
CCTGCGTTGTGATTATATTCCAGACGCCCCAGTGTCGCCGACGTCTCCAA
CACCCGTTTCACTATCCTCACTGCCCGACAATCCCGCCATTAGCACCGCC
GCGCCCTCCTCATCAGGAACAATGACCGCGCCCACATCAGCTGCAGACAA
TGAGCGGCTCGATCAGCGGAGCTTTACTTGTTGGCGCGCTCGCCTATTGC
TTTTGCCTTGGTCGTAAAAGAAAGAGACGAAAACAACACAGCCCTGTGCA
ACGAGATGTGGATTCAGCAGAGCTACCGACGTACGAAGAAGCGTCTGCTC
TAGCTAGGGCACTTATTTCGCTGTCGAACGATGGCGCGGTAACCATGGAC
AATACACCTGAGATGAAGGTCTTGCAGAGACTTTCCGACTCGCAGCGATC
TCAGAACACCGATGGGATACGAGCAGGGTCAACGCTGACGTCTCTGTCTG
AGGACGAACCGATCGGCGAGGGGTGTGGGGGGCGAATTTCGGTGATGAAG
GATGCCTTGAGCGCTGTGGTGGATTCGGCCCGAGCGGTCGCGGAAAAGTC
GTCCATGCCTTTCGTGCCCGAGATTGCATCATTCTTGGCAGTGCTGGCTT
CCTTATGCAGCAACTTCGGTGGCAACGAGCAAAACATGCCGAGGACGGTT
CGGTGGTGTGGATCTATGCTGGAAATGCTTGACCAAAGCAGCATTCACAT
GGTCAGTTTCTCTGTCGGGGGAGGGGGGGGGGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAA
AAAAACGGTAACCTGGTTGCCGAGTTCACGAAGTGAATTGGCTTGTTTTA
CAACGTCGTTGCCAGGCGACGAAAACCCAACCCCGATAGCAAATACCGGG
GGGTGTCGGGGGAGGGGCAGGCTCGAAAGCGGACGCTTCACCCGCGCAAC
GATATCTTAATTCGGTGGTGTCTCATGAAGAGCTATAGCGAGCCTGCTTA
CTTTGCCAAAAGGTCGGTCGCTTACCCGGAAATCTCACAAGCTGCTTGCT
TGGCTCCGCGCAGGATGATTCTGGGCCAGTGACAGAACTTCTCGAGGAAG
TTCGCGATGCAATTGCCGAGATCGTGAAGGTATGCACGGTGTGTGTAAAT
ATGCGATCCTCTGCTCGACATCATGGTTTTAATCGATGACGTACTTTGTT
TTTTGTTGCTGCTTGTCGTTGCTATTTTAGTTGTTGATGATGATAGTTAG
CCCAGACAATCACGCGCTGAAAGAAACAGGCCGGGTTTTCCTCGATGCGT
TGAAAAAGCTCCATTTTCTTGTAAGCCTTACCACACTGCTCTGTGGTAGT
GGGACTTGGTCCTAGGCGATTTCAGCAGTCCAGCTGACAGTTCTCGCGAA
TTGAACGCTGGCAGCTTCTCCGTTCACGAGGTAGTAGCGCGGAGTGAGGT
GCCTTTCAATCCCTTACATCCGTTTGCCTTCGTTCGCGCTTGGCGAACGC
CATCTGTCGTGTAGCCCGCCTTATGGAACCCTGTCCGCAAGTACGGCGTT
CTCGACATTTGAAAGGTCTGAGGACGGCTTGGACGGGCTGATCCACCTAT
GCACCGTCGCAGGTCGCTACATGCTTCCTTAGGAAAGGAAAGCTAGCGCG
TGTTTTGACTTCCACCTTGTACAGGAGCGCCAAGAAACCGCCAAGACCGG
TCTACGGGATGCGCTACAACGCCTCCAGACAGGCGTTGCCTTTGTCTCCA
TGAATGTGCTTCACCGCACCTCAACCAGCGTCGATAGTTTGGCAAGGAGA
GTCGGGCCCGAGGGACATATTTCTCGGAAGGAGCGAAAGAAGAGGATGAT
GGAGTGCCACGAGATACCTTCTGGCGAGGTGATCTGCTTCGACGACATGA
TCTTGGGCACGGGGGGCTATTCCACAGTGCAGCTTGTGGGGTACCAAGAA
ACAGCTGCCGCAGCAAAGGTGGTGCAAATACCGTATATGACACAAGATAA
CACACCCCCCGTGACCAATTTTCGAAGCTCGATTTCCCAACTGCAGGAAC
AGTCACAGCGCCGAACATGGCGGCGTTGAAACCCTCTTGTCCAGAGCTTT
TCGAAAATGTATCCTTTCGTTTATGCATTCTCTTCGTCGTGGAGTAATCG
AGCTTTGAAAATCAGTCCAGGGGGTGTGTTATCTTGTGTCATATACGGTA
CCCAAACCCGATGCAGCTGATGCAACCGAAAAGATGACCAAGATGTTCGT
GAACGAGCTGCACGCCATGATGGAGCTACGGTCGCAGCACACGGTCAGCA
TCTTCGGTGCCGTCACCTCCGTTCCGGGGAAACTGGTGCTCATCATGGAA
TAAATGGAAGGTGCGTATGTGTGTGTGCACCTAGCGTCAGAGGATCGTGT
GTTGGAGTCGGAAGGTGTACCGGGGGTGCCCGCGTGTTCGGATTGATTCA
ACGCATGCTCCTGTCATCTGAAATGCAAAGCCGTTAATATGATGGTTGAG
GGTTGTTAATGCTACTTTAACCCCGTTCGCCGCCTGACGTGCTGATGTGT
GTCGAAACAAAGGCGGCGATCTGCGGGCTTTTCTCAGTGCGGCAAGCGAT
CCGCTCGAGAGCCGGGTCGAGAATGGCCTGGCTTGCGACATCGCCGAAGG
GATGCAGTTTTTGCACTCAAAAAAAGCTTTTCATGGTGACCTGAAGTCTC
CGAATGTGCTCCTAACCAGGGACAACAGAGCCAAGGTGAATGCAGGACTT
GATACCAATTGTCGTGCAACGACAGCGCTATTCCATTACCATCACGTTCG
CTCCAATATGTTGATTGATGCAGGTTCAGGGTTCCGGCTGTTTGGGATTT
TTTTCTCTCTACACACGCATAGGGACTTCCCTGCACCGTGGGCCAGCTAG
AGGCGACTCACCCCATTCCCAAATTCCAATTCCTCGTTCTGATCAGATGC
TTTTGTTTGCTGCTTGCCCCGCACAACGTTGTGTAGATTGCAGATTTCGG
CACCGCTCGAACCATCGAAGAGATCGCGTCAATGGCCACGAGGGGGGGGA
CTTTGTGCCAGTACGGCACGACCCTCAAGTGGGCCGCCCCCGAAGTGCTG
AACGACGAACCTTTGCGGGCTGAAAGCGACGTATACAGCTTTGGCGTGAT
TGTCTGGGAGATTGTCAGCCGGCAGGTGCCTTGGCAAGACGCCAGTCTGA
AGGAGATCTTGGTGAAAGTGTGCAGGGGGAAGCGTCCTGAGATACCGGCA
GAAGCACCGCCGCTCCTGGCATCGTTGATCGCGCAGTGTTGGACAACCGT
CCCAGAGGATCGAATTCCTTTCAAACAGGTGCTAGCTGTGCTCAAGATGT
AAACGGCCAGGCTCCCCCACGCAAGGGTTGTTAGTTAAGACATGGGTGGG
GCGTTTGCTGTCGAAATAACCACAAGAACCTGGAGCTTTAGTAGC back to topCoding sequence (CDS) from alignment at Scaffold_389:786004..790898+ >EsuBft832_10a-0001 ID=EsuBft832_10a-0001|Name=EsuBft832_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=933bp|location=Sequence derived from alignment at Scaffold_389:786004..790898+ (Ectocarpus subulatus male Bft15b) ATGAGCGGCTCGATCAGCGGAGCTTTACTTGTTGGCGCGCTCGCCTATTG CTTTTGCCTTGGTCGTAAAAGAAAGAGACGAAAACAACACAGCCCTGTGC AACGAGATGTGGATTCAGCAGAGCTACCGACGTACGAAGAAGCGTCTGCT CTAGCTAGGGCACTTATTTCGCTGTCGAACGATGGCGCGGTAACCATGGA CAATACACCTGAGATGAAGGTCTTGCAGAGACTTTCCGACTCGCAGCGAT CTCAGAACACCGATGGGATACGAGCAGGGTCAACGCTGACGTCTCTGTCT GAGGACGAACCGATCGGCGAGGGGTGTGGGGGGCGAATTTCGGTGATGAA GGATGCCTTGAGCGCTGTGGTGGATTCGGCCCGAGCGGTCGCGGAAAAGT CGTCCATGCCTTTCGTGCCCGAGATTGCATCATTCTTGGCAGTGCTGGCT TCCTTATGCAGCAACTTCGGTGGCAACGAGCAAAACATGCCGAGGACGGT TCGGTGGTGTGGATCTATGCTGGAAATGCTTGACCAAAGCAGCATTCACA TGGATGATTCTGGGCCAGTGACAGAACTTCTCGAGGAAGTTCGCGATGCA ATTGCCGAGATCGTGAAGGAGCGCCAAGAAACCGCCAAGACCGGTCTACG GGATGCGCTACAACGCCTCCAGACAGGCGTTGCCTTTGTCTCCATGAATG TGCTTCACCGCACCTCAACCAGCGTCGATAGTTTGGCAAGGAGAGTCGGG CCCGAGGGACATATTTCTCGGAAGGAGCGAAAGAAGAGGATGATGGAGTG CCACGAGATACCTTCTGGCGAGGTGATCTGCTTCGACGACATGATCTTGG GCACGGGGGGCTATTCCACAGTGCAGCTTGTGGGGTACCAAGAAACAGCT GCCGCAGCAAAGCTGATGCAACCGAAAAGATGA back to top
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