Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft778_8 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 51 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-15 |
| Date creation | 2016-06-15 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft778_8a-0001 ID=EsuBft778_8a-0001|Name=EsuBft778_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=517bp|location=Sequence derived from alignment at Scaffold_161:101898..103908- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTGCAGGAGAATACAACGGCGTTGGCGCGCTGTCGAAGATTCGTTCGC
TTTCGCCGACTTGGGGCGGATATTGCTGAGAGCTTGGTCCTTCGATGTCA
CCGTGCTGTTTGGCGTTGCGGAGGAGCTGAGCTTCGTGTCCTATGTCACT
AACGACGGACCATTCTATGCACACGTGCCTGGCGAATCGACTGGTGCTGT
GCAGGCGAACATCCAACGATACGTTACCGACAAAATATCAAGAAGACTGG
CATGGACAAGCGAACGGGGTCCGGCGAAGTCGACACGCGCATGACGATGA
CGATACTGCTGGACGAGCATCGTGGATACCGTCCGGGCACAATTTGGTCC
CAACCAGAGGGGGGCTAGGGAATTATTTGGGCGGGCGGGCGGGGAATTTC
GCGCGGACGTGGTGCCTCAAGGGAACTGTAGATTTGGAGTCGTGGGCAGG
GGAGAGAGGAGCTTTTGCTTGGGCTGGGACGAGGCGACAGGCGCTTGTGT
ATGGGCTGTGGGGGGAG back to topprotein sequence of EsuBft778_8a-0001 >EsuBft778_8 ID=EsuBft778_8|Name=EsuBft778_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=97bp
MCRRIQRRWRAVEDSFAFADLGRILLRAWSFDVTVLFGVAEELSFVSYVT
NDGPFYAHVPGESTGAVQANIQRYVTDKISRRLAWTSERGPAKSTRA back to topmRNA from alignment at Scaffold_161:101898..103908- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft778_8a-0001 ID=EsuBft778_8a-0001|Name=EsuBft778_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2011bp|location=Sequence derived from alignment at Scaffold_161:101898..103908- (Ectocarpus subulatus male Bft15b)
ATGTGCAGGAGAATACAACGGCGTTGGCGCGCTGTCGAAGATTCGTTCGC
TTTCGCCGACTTGGGGCGGATATTGCTGAGAGCTTGGTCCTTCGATGTCA
CCGTGCTGTTTGGCGTTGCGGAGGAGCTGAGCTTCGTGTCCTATGTCACT
AACGACGGACCATTCTATGCACACGTGCCTGGCGAATCGACTGGTGCTGT
GCAGGTATGTGCGTTACCTATGCACTGATGTGATACCTCTTGAGCGAACC
GGTGCAAAGCTTTGTTGTGAACGAACATGTGAAATTGTCGGCATTTAGCA
GCACAAGGGTCGTCGTGTTGGGTCTGTATTGGCGTGGTCACAGCACCAGC
AGTATAGAAGCGTTCGTTTACGGCGATGTACTGTAGATTCGAAACACGCT
CCTGGTGTACGACGTATTGTTGTGGCCCACCTTTGAGTCGACTATGTAGG
GGCGGAGCTTGCGTGGAGCTATAATCTAGGGATGAGCAAGCTCTGTCGTA
CTTTGTTGGGAGGATTTTGAAGGAGACAACCAACTTGAGACAACCCCCCT
CTTCAGCAACGCCGTTTTAGCACTGGTTCTACAGCAGTGAAACAGGTTGA
CTGAGGTACAGCAGGGCACAGTCGAACTTGTTTTTCGTGCTCAATGCTCC
GGAACTGGTCTGTGCTGTTTGCTTTGACTCTTGGGTTATCTTTCGAGCTG
GGTCACAATCTCAAAGAGGTTGATAATTCAGTATCGTCTGCAAGGGCTTC
AATCCTTCCCTTCCGACACATCACACCACCACCCTAGACCCGCCTATAGC
TACCTGAACAGATATCGGCTGTTCGGGCGTGTGCCTCCAGAAATAGCCTT
TCGAAAAACACGTCAATAATGCCACAGGGCTTCCCTCCGGGATTCGGTGC
AGTACCGAGTAACGTATGGTACAGGGTATGAAGTGGGATGAGGGGTGCTT
CCGGAGACGCTGTTGTTGTTGTTGTTGTTGTCTTCACATTAAAAACCATC
CCGGTCTCTCTATCCAGTACCTCCTTCTGTCTCAATCTCTCCGTACTAAT
CCATCACTTGACTCGGCCAATTTGACGCTAGCGGAAGAGAAACAGTAGCA
ACGAGGCACGCCGTCATCCCCCCAACCCTCTTCACCCACCCCTTCCCCCA
GCTTGTAAACCTCGCCTTGGGGCCTCATGTGGGTATATATTTTGTTGTTG
CGACAATATTTTCTCGGAAACGAATGTTGACAATGCACCTGTCGTGCGGG
AGGCCCTGGGTTGTGAGTTGGATACATAGCTNGCGGAAGAGAAACAGTAG
CAACGAGGCACGCCGTCATCCCCCCAACCCTCTTCACCCACCCCTTCCCC
CAGCTTGTAAACCTCGCCTTGGGGCCTCATGTGGGTATATATTTTGTTGT
TGCGACAATATTTTCTCGGAAACGACTGTTGACAATGCACCTGTCGTGCG
GGAGGCCCTGGGTTGTGAGTTGGATACATAGCTTCAGCTAACAGGAAACC
CAACTGCCGTGCTGTTACCTTGCCCCTGCAAATTTCGTGATCTAATGCCC
AAGGCGAAGATCCAACGATACGTTACCGACAAAATATCAAGAAGACTGGC
ATGGACAAGCGAACGGGGTCCGGCGAAGTCGACACGCGCATGACGATGAC
GATACTGCTGGACGAGCATCGTGGATACCGTCCGGNNNNNNNNNNNAGGC
GAACATCCAACGATACGTTACCGACAAAATATCAAGAAGACTGGCATGGA
CAAGCGAACGGGGTCCGGCGAAGTCGACACGCGCATGACGATGACGATAC
TGCTGGACGAGCATCGTGGATACCGTCCGGGCACAATTTGGTCCCAACCA
GAGGGGGGCTAGGGAATTATTTGGGCGGGCGGGCGGGGAATTTCGCGCGG
ACGTGGTGCCTCAAGGGAACTGTAGATTTGGAGTCGTGGGCAGGGGAGAG
AGGAGCTTTTGCTTGGGCTGGGACGAGGCGACAGGCGCTTGTGTATGGGC
TGTGGGGGGAG back to topCoding sequence (CDS) from alignment at Scaffold_161:101898..103908- >EsuBft778_8a-0001 ID=EsuBft778_8a-0001|Name=EsuBft778_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=294bp|location=Sequence derived from alignment at Scaffold_161:101898..103908- (Ectocarpus subulatus male Bft15b)
ATGTGCAGGAGAATACAACGGCGTTGGCGCGCTGTCGAAGATTCGTTCGC
TTTCGCCGACTTGGGGCGGATATTGCTGAGAGCTTGGTCCTTCGATGTCA
CCGTGCTGTTTGGCGTTGCGGAGGAGCTGAGCTTCGTGTCCTATGTCACT
AACGACGGACCATTCTATGCACACGTGCCTGGCGAATCGACTGGTGCTGT
GCAGGCGAACATCCAACGATACGTTACCGACAAAATATCAAGAAGACTGG
CATGGACAAGCGAACGGGGTCCGGCGAAGTCGACACGCGCATGA back to top
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