|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft759_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 367 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft759_2a-0001 ID=EsuBft759_2a-0001|Name=EsuBft759_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3673bp|location=Sequence derived from alignment at Scaffold_561:240954..246155- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGATGCGGGTCGGTCAGGAGACCTTTGCTGATCGTCTCTCAGCAATAAC AAGCAACTTTCCCATCTCAACGTGGTCGTGGACAAGCGTGTCAACGACAG AACCTTCATCTATCTCTCGGAGCAAGCCACCGCTCACGGCATCACTCCTT GAAACTTGGCGTCAGCTGGCATTACACGAGGACACCATGTCCAGCGGCAA AGTGGAACTCCTGGGCGACAATGTGGAAATCCTCGACTACGAACCCGAGG GCGAGGCTCCCACCGCAGAGCAGTTTCCAGCGGCGGGTGCAGAAGACGAG AGCCCCCCCATGTCCATGGTGTTCACCGTCGATGATTTGCTGGACAACAT CGCCACAGGAGATCCGGCGGAACTGGAGCGGGCCTACAACACCGGACGTG TCTCTCTGGAGAATATCGTAGAAGCGGCCCATCTGTCGTCCGATTCCCCC CTTTTCGTCGCTCCTTTCTCGCTCCCGCCGGAAGATCCTCTTGCCCCACG ACGAGTTTATGGCGTACCAAAGGTTGAACGAGATGTGGTGCGACGGTCTT GCCGGGAAGATAGCAGTGGCGGAGGCGCGAGAGCAGGCGAAGCGCGAGGA CGCGGAGCGCCTGGCGGAACGGGAGGCTGCTCTGGCCGCTGCGGCGAAGA AGCAGGAGTAGGAGCGTGAGGCTGTTCGGGCTCCTGCGGCGTGGAAGTAG GAGGAGGAACGTGAGGCTGATCTGGCTGCTGCGGCGAGGAAGCAGGAGGA GGAGCGTGCGGCTTTTCTGGCGGAGCGTGAGGCGTATCTCCAAGCGGCTA GGGCGAAGCAGGGGGCGCTCCGATCGCGGCTGAAGGAGCTGGAGCCCCGN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNGCATCCTCTTTTTGCATGGGCTGGCATCA AACAACTTGTTCGTGCANGAGGACAGCGACTCCGGAGTTTTCGGTGACTT TGGGTCTTCCGGCTGGTGCTGAAGACGGGGCATCGTTTGCGGCGGCAACC ACGGTGTACAAGTTCCACGTGGAAGATACAGCGTTCCTGTCCCGCCCGCT GGAGATGCCTGCAGAAGATGTCACGTTCCACGGCGAGGACAAATTGGCAG CTCTTTTTGCATGGGCTGGCATCAAACAACTTGTTCGTGCACAATTCCCC CCACCGCACACCGTTGCTTTCGGGCACATCTACCACACACCGTACCTCGC GAAACTTCCGCCTTCTTCGCGGCAGTCCGTGTTCCAGCTGTTGTTCGCTC TCCGTCGTGCCACCTTTCATGAAGGTCCTCAAGGAACGTCGGTGGTGACC CAGGAGGGAGGACTCCAGCTGCCTCTTGCTCGTGCTGCTTCGACCAACGA CTTCAAGCACGATCTACAAGCCCCCCGGCAGGCCTCTTCACGCCCTGCAC ATGGTTCTGGAGAAAACAAGGATTTCAGTAGGTCGGCGGCTCCGGTGTCC AAGAGCTGGAAGAACCGTTGGGGCGACCGGGATTCGACGGCCAAGAGCAG GACGGACGACCACCACCGCTTCACCCAGTCTTCGCGAGGGCGCGGCGTCG GAGATAACAGGCGAGGGCGAACCGTGGGGAACCAGCCTACGAGGTCTTCG CCGGCGAGTCGCCATCGCCGGAGCAGGAGTCGGAGCGCAGAGCGACAACA GCACATCAATCCTTCGTCTGGGCGTGGGCGCAGCCGCAGCGGAGACCGTC ATGGGAGAAACACGCCTCCGTCTAGGCGTAGCCGTAGCCGGAGCCAGAAC CAGAGCGGGGGCAATAGCAGGGCGACCAGCACTGACAGCAGTCGCGGTGG GAAAGGGCGACGGAGGTCAGGCCACGGTAACAGGCAAGTGATCCATGATC GAGGTGATTTTCGTGGCTCTGGGTTGTTGGGGGAAAGCGAGGATGCTTCA GAAGACGGTTCTCTCTGTTCTTCACCGCTTGCTCTACGCCCTCCCGCTGA TGTAGGCCAACCGACCAGGTCTTCTTTGGCTTTCAAACTTGCCAACATGC AACTTCGTGAACGTTCAGCCGCTGTGAAAAGCCATGCCCCTGCCCATGCC GTTATGGATCATCCCACATCTTCCTTGCCTTTGGACGAACCTGTTGAGTC ACCACGCCATGCTGCATCACACGCCTCGACTTCGGCCTCCCGTACTGAAA TGCTGTTGGAACAAGTACTCACTCTCCTGCGAGCAAATCAAGTAGTGGAT GCTGCTGCCGACGCGAATGTACAACCTCCTGTGCCCCCCCACACTCCTAG CGTGCCACCACCTGCCCCATCTTCTTCCCCACCAACGCGTCCGACAGATG CAAGACCACGCTTCGAGCTTTTCGGGGGCTCCTGTGGGACGCGATGTTCG TGCCGAAACCGCTGCCAGGACCACGTCAGCATCATCGTCATCAGCCACGA GGTCGGCGACAGTACCGGTCGAGCCTGCGGTGGCACAGTCAGCGTCGACA GCCCCAGCCCTGTTGCAACAGCATTTGGTGGTATCGCCCCCCCCCCTCCA GACTATGTATGAGTACACCCCCTCCAGTGTGCGTCTGTTCTGATTGATCC TGACTCTGCAACCGGCCACATCGTCGGGCCACCGAGTCAAGCAACATCAC CGGTGCCACAGGACGATGCTGGTTTGCCTTTGTCTTCCACAGGAGCGAGA GCGAGGCAGGAGGCTCTGCACGCTGCGGACGCCGCTGCAGCGGAGGCCGA CACCATCCGCATTCAAGACAAAATGGACAAGCTGAAGCCGGAACAACTTG ATAGTGTCACACGCTTGCCCCTCGGTCGGTCCTAATCCTGATGAACTTGC TCGCTTCGCGTCTAGCTGCAAGGGTGTGGTCACAGAGATCCTCAACAAAA GCGACGTCAAGCGCAAGCAGACTTTCAATTCCTCCACCTGGGTCACCGGA TGGCTTCCGTTGTTGCGCAAACGTGTCCGTGCTGCTGTCGTTGAAGGCCA AACCACCAACCGTGCCACTCTGGAATTTCTTGATGCCACTTCCTACAGGT AGAAAACCATCTGCGCAAGGAGCCGGCAGGGCCCTCGTACGCCTTCTTCA TCCAGAAATTGGCGGCCGCCTGGGACACTCAAAACAAGAGCTCGGGGATT GATCGTCTTCGCAGTTTTGGCGTATCCAACGGCGAGACTTACGGAGAATG CACCCGTCGCTATAAGGCTCTGGCCATGACCGTCATGGTTTTCCACCACG CGTTCAAGCCTTCGGATGCGCAAGTGCAGATAGCTGTTCGAGACTCCATG TTAAAGCAGTTTCCGGTAGTGTCTGGGCAGGTGTACAAGGATGAGCAGCT CTCCATGGAAGCCCCTTTTGGGCGACATGCTTCGTGTCTGGATGATATGT GGGATGTGTTGGNNNNNNNNNNNNNNTGTTGGACAAGCGTGCGTTCGCGC ACACGCCGGCGGTACATGGAGATGATTTCTTTTCGGTATCTTCCACGAAT GCTAGGAGTTTGTCTGCTGTTTCGCGTGCTGTTGCTTCTTCGGCGTTGCG TTCGAGGGTGACCCCTTCGTGGAGCCAAGGTTCTTCGACCGCCGTGATGA GTGTTGACCCTCTACCTAATGAT back to topprotein sequence of EsuBft759_2a-0001 >EsuBft759_2 ID=EsuBft759_2|Name=EsuBft759_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=222bp
MMRVGQETFADRLSAITSNFPISTWSWTSVSTTEPSSISRSKPPLTASLL ETWRQLALHEDTMSSGKVELLGDNVEILDYEPEGEAPTAEQFPAAGAEDE SPPMSMVFTVDDLLDNIATGDPAELERAYNTGRVSLENIVEAAHLSSDSP LFVAPFSLPPEDPLAPRRVYGVPKVERDVVRRSCREDSSGGGARAGEARG RGAPGGTGGCSGRCGEEAGVGA back to topmRNA from alignment at Scaffold_561:240954..246155- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft759_2a-0001 ID=EsuBft759_2a-0001|Name=EsuBft759_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5202bp|location=Sequence derived from alignment at Scaffold_561:240954..246155- (Ectocarpus subulatus male Bft15b) ATGATGCGGGTCGGTCAGGAGGTATACCCTTCTGACCCCTACCCCTTTAG
CAGTGTCTACTCTGTGTACCCCCTGAGATGAAGTTGGATCCCCACTTCAT
CCCAGACCTTTGCTGATCGTCTCTCAGCAATAACAAGCAACTTTCCCATC
TCAACGTGGTCGTGGACAAGCGTGTCAACGACAGAACCTTCATCTATCTC
TCGGAGCAAGCCACCGCTCACGGCATCACTCCTTGAAACTTGGCGTCAGC
TGGCATTACACGGTAAGCGGGTGCTGGACGCGGCTTCCACACTGCTGTGT
GTTGTTGCCACGCTTTTTTCACAACCACCGGGTTGCTTGACATTTGGTCT
CACCACCCACGAGAATCTAGACTTAGCCTCTTGTCTGCTTCCTCTCCTGT
AGAGATGCTGGCTTGTGATGCTTTTGCGAAGCGCCCGCGGGACTGGGACC
TTGCAAAGGATACGCGCCTCGGAGGCCATCGCGATGTTTTGGGTGATTTC
TCGTACGTTTGCCGCCCCTCGAAAGCTATTTTGTCTGCGNAGAGATGCTG
GCTTGTGATGCTTTTGCGAAACGCCCGCGGGACTGGTACCTTGCAAAGGA
TACGCGCCTCGGTGGCCATCGCGATGTTTTGGGTGGTTTTTCGTACCTCC
GCCGTTCCTCAAAAGCTATTTCGTCTGCGTTGGCGGTCCATGAAGTGATT
TCTGTGGCGGATACGCTCTGCATGGAGCGACCTGAGTTGCTGGCGTTGTG
TAGTGGGACCCGAGATGACAGCATGCTTCCCACGTCTGCTACCACCTCTA
CTGCATTCATGCCGGCGTACCGGCTGATGTCCGCGGATTTTCCTGTTGTG
CTGTCCGTTTTGACTCCGCTTGCATCGACTTGGAACGCGATGTGTGCGCA
CAAATTGGGTGTCAGCCGCCCCACCAGCCTTCGCTCCATTTTTCGAAACC
ACGTGTCACTTTTTTTCGAAGAATCGTTCACCCTCAAAGCAATTGGATTG
GAAACCTTTCAACAGCGCAAACCCACAGCGGTCTTTGCTCGCACTTCGGC
GCCAGTTGCGGAGGAACGCCGTGCTGCTCTGCGTGTCTTTTGGTCGGAAA
CCCTCGTGTCTCCATGAAACACGGGCCCTTTTTGTGCTAGCTTCTACTGC
TGTTTGTGCGTGGCAAGGAATGCTTTTGGACGCTTTTTCTGCTTGGTTGG
ATCCGCTTCAACCTCGTGTGCACCAAGCTTTTATCACTGGGAGTATGCTT
TCCTGTGGGTATCTCCGCCTTTCGCATGGACCTCGGCTTGCTTTTCCNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCAAAATCGA
TCGTAGCTACCCTCTCTCTGGCCCTGTTCTTGTTAACAAAGAGGACACCA
TGTCCAGCGGCAAAGTGGAACTCCTGGGCGACAATGTGGAAATCCTCGAC
TACGAACCCGAGGGCGAGGCTCCCACCGCAGAGCAGTTTCCAGCGGCGGG
TGCAGAAGACGAGAGCCCCCCCATGTCCATGGTGTTCACCGTCGATGATT
TGCTGGACAACATCGCCACAGGAGATCCGGCGGAACTGGAGCGGGCCTAC
AACACCGGACGTGTCTCTCTGGAGAATATCGTAGAAGCGGCCCATCTGTC
GTCCGATTCCCCCCTTTTCGTCGCTCCTTTCTCGCTCCCGCCGGAAGATC
CTCTTGCCCCACGACGAGTTTATGGCGTACCAAAGGTTGAACGAGATGTG
GTGCGACGGTCTTGCCGGGAAGATAGCAGTGGCGGAGGCGCGAGAGCAGG
CGAAGCGCGAGGACGCGGAGCGCCTGGCGGAACGGGAGGCTGCTCTGGCC
GCTGCGGCGAAGAAGCAGGAGTAGGAGCGTGAGGCTGTTCGGGCTCCTGC
GGCGTGGAAGTAGGAGGAGGAACGTGAGGCTGATCTGGCTGCTGCGGCGA
GGAAGCAGGAGGAGGAGCGTGCGGCTTTTCTGGCGGAGCGTGAGGCGTAT
CTCCAAGCGGCTAGGGCGAAGCAGGGGGCGCTCCGATCGCGGCTGAAGGA
GCTGGAGCCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATCGTTTGCGGCGG
CAACCACGGTGTACGAGTTCCACGTTGGAGATACAGCGTTCCTGTCCCGC
CCGCTGGAGGTGCCTGCAGAAGGTGTCACCTTCCACGACGAGGACAAATT
GGCAGCTCTTTTTGCATGGGCTGGCATCAAACAACTTGTTCGTGCANGAG
GACAGCGACTCCGGAGTTTTCGGTGACTTTGGGTCTTCCGGCTGGTGCTG
AAGACGGGGCATCGTTTGCGGCGGCAACCACGGTGTACAAGTTCCACGTG
GAAGATACAGCGTTCCTGTCCCGCCCGCTGGAGATGCCTGCAGAAGATGT
CACGTTCCACGGCGAGGACAAATTGGCAGCTCTTTTTGCATGGGCTGGCA
TCAAACAACTTGTTCGTGCACAATTCCCCCCACCGCACACCGTTGCTTTC
GGGCACATCTACCACACACCGTACCTCGCGAAACTTCCGCCTTCTTCGCG
GCAGTCCGTGTTCCAGCTGTTGTTCGCTCTCCGTCGTGCCACCTTTCATG
AAGGTCCTCAAGGAACGTCGGTGGTGACCCAGGAGGGAGGACTCCAGCTG
CCTCTTGCTCGTGCTGCTTCGACCAACGACTTCAAGCACGATCTACAAGC
CCCCCGGCAGGCCTCTTCACGCCCTGCACATGGTTCTGGAGAAAACAAGG
ATTTCAGTAGGTCGGCGGCTCCGGTGTCCAAGAGCTGGAAGAACCGTTGG
GGCGACCGGGATTCGACGGCCAAGAGCAGGACGGACGACCACCACCGCTT
CACCCAGTCTTCGCGAGGGCGCGGCGTCGGAGATAACAGGCGAGGGCGAA
CCGTGGGGAACCAGCCTACGAGGTCTTCGCCGGCGAGTCGCCATCGCCGG
AGCAGGAGTCGGAGCGCAGAGCGACAACAGCACATCAATCCTTCGTCTGG
GCGTGGGCGCAGCCGCAGCGGAGACCGTCATGGGAGAAACACGCCTCCGT
CTAGGCGTAGCCGTAGCCGGAGCCAGAACCAGAGCGGGGGCAATAGCAGG
GCGACCAGCACTGACAGCAGTCGCGGTGGGAAAGGGCGACGGAGGTCAGG
CCACGGTAACAGGCAAGTGATCCATGATCGAGGTGATTTTCGTGGCTCTG
GGTTGTTGGGGGAAAGCGAGGATGCTTCAGAAGACGGTTCTCTCTGTTCT
TCACCGCTTGCTCTACGCCCTCCCGCTGATGTAGGCCAACCGACCAGGTC
TTCTTTGGCTTTCAAACTTGCCAACATGCAACTTCGTGAACGTTCAGCCG
CTGTGAAAAGCCATGCCCCTGCCCATGCCGTTATGGATCATCCCACATCT
TCCTTGCCTTTGGACGAACCTGTTGAGTCACCACGCCATGCTGCATCACA
CGCCTCGACTTCGGCCTCCCGTACTGAAATGCTGTTGGAACAAGTACTCA
CTCTCCTGCGAGCAAATCAAGTAGTGGATGCTGCTGCCGACGCGAATGTA
CAACCTCCTGTGCCCCCCCACACTCCTAGCGTGCCACCACCTGCCCCATC
TTCTTCCCCACCAACGCGTCCGACAGATGCAAGACCACGCTTCGAGCTTT
TCGGGGGCTCCTGTGGGACGCGATGTTCGTGCCGAAACCGCTGCCAGGAC
CACGTCAGCATCATCGTCATCAGCCACGAGGTCGGCGACAGTACCGGTCG
AGCCTGCGGTGGCACAGTCAGCGTCGACAGCCCCAGCCCTGTTGCAACAG
CATTTGGTGGTATCGCCCCCCCCCCTCCAGACTATGTATGAGTACACCCC
CTCCAGTGTGCGTCTGTTCTGATTGATCCTGACTCTGCAACCGGCCACAT
CGTCGGGCCACCGAGTCAAGCAACATCACCGGTGCCACAGGACGATGCTG
GTTTGCCTTTGTCTTCCACAGGAGCGAGAGCGAGGCAGGAGGCTCTGCAC
GCTGCGGACGCCGCTGCAGCGGAGGCCGACACCATCCGCATTCAAGACAA
AATGGACAAGCTGAAGCCGGAACAACTTGATAGTGTCACACGCTTGCCCC
TCGGTCGGTCCTAATCCTGATGAACTTGCTCGCTTCGCGTCTAGCTGCAA
GGGTGTGGTCACAGAGATCCTCAACAAAAGCGACGTCAAGCGCAAGCAGA
CTTTCAATTCCTCCACCTGGGTCACCGGATGGCTTCCGTTGTTGCGCAAA
CGTGTCCGTGCTGCTGTCGTTGAAGGCCAAACCACCAACCGTGCCACTCT
GGAATTTCTTGATGCCACTTCCTACAGGTAGAAAACCATCTGCGCAAGGA
GCCGGCAGGGCCCTCGTACGCCTTCTTCATCCAGAAATTGGCGGCCGCCT
GGGACACTCAAAACAAGAGCTCGGGGATTGATCGTCTTCGCAGTTTTGGC
GTATCCAACGGCGAGACTTACGGAGAATGCACCCGTCGCTATAAGGCTCT
GGCCATGACCGTCATGGTTTTCCACCACGCGTTCAAGCCTTCGGATGCGC
AAGTGCAGATAGCTGTTCGAGACTCCATGTTAAAGCAGTTTCCGGTAGTG
TCTGGGCAGGTGTACAAGGATGAGCAGCTCTCCATGGAAGCCCCTTTTGG
GCGACATGCTTCGTGTCTGGATGATATGTGGGATGTGTTGGNNNNNNNNN
NNNNNTGTTGGACAAGCGTGCGTTCGCGCACACGCCGGCGGTACATGGAG
ATGATTTCTTTTCGGTATCTTCCACGAATGCTAGGAGTTTGTCTGCTGTT
TCGCGTGCTGTTGCTTCTTCGGCGTTGCGTTCGAGGGTGACCCCTTCGTG
GAGCCAAGGTTCTTCGACCGCCGTGATGAGTGTTGACCCTCTACCTAATG
AT back to topCoding sequence (CDS) from alignment at Scaffold_561:240954..246155- >EsuBft759_2a-0001 ID=EsuBft759_2a-0001|Name=EsuBft759_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=669bp|location=Sequence derived from alignment at Scaffold_561:240954..246155- (Ectocarpus subulatus male Bft15b) ATGATGCGGGTCGGTCAGGAGACCTTTGCTGATCGTCTCTCAGCAATAAC AAGCAACTTTCCCATCTCAACGTGGTCGTGGACAAGCGTGTCAACGACAG AACCTTCATCTATCTCTCGGAGCAAGCCACCGCTCACGGCATCACTCCTT GAAACTTGGCGTCAGCTGGCATTACACGAGGACACCATGTCCAGCGGCAA AGTGGAACTCCTGGGCGACAATGTGGAAATCCTCGACTACGAACCCGAGG GCGAGGCTCCCACCGCAGAGCAGTTTCCAGCGGCGGGTGCAGAAGACGAG AGCCCCCCCATGTCCATGGTGTTCACCGTCGATGATTTGCTGGACAACAT CGCCACAGGAGATCCGGCGGAACTGGAGCGGGCCTACAACACCGGACGTG TCTCTCTGGAGAATATCGTAGAAGCGGCCCATCTGTCGTCCGATTCCCCC CTTTTCGTCGCTCCTTTCTCGCTCCCGCCGGAAGATCCTCTTGCCCCACG ACGAGTTTATGGCGTACCAAAGGTTGAACGAGATGTGGTGCGACGGTCTT GCCGGGAAGATAGCAGTGGCGGAGGCGCGAGAGCAGGCGAAGCGCGAGGA CGCGGAGCGCCTGGCGGAACGGGAGGCTGCTCTGGCCGCTGCGGCGAAGA AGCAGGAGTAGGAGCGTGA back to top
|