EsuBft741_7a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft741_7a-0001
Unique NameEsuBft741_7a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_195contigScaffold_195:757052..761615 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D8LRA6
ProteomeIdEsuBft741_7
Protein domainsPTHR10060
Protein domainsG3DSA
Protein domainsSSF51556
Protein domainsIPR001130
Ownerapollo_admin@sb-roscoff.fr
Nb exon8
Max annot lvl2759|Eukaryota
Length127
Hectar predicted targeting categoryother localisation
Evalue5.38e-80
EggNOG OGsCOG0084@1|root,KOG3020@2759|Eukaryota
Ec32 ortholog descriptionTatD family
Ec32 orthologEc-06_003240.3
Date last modified2016-06-14
Date creation2016-06-14
KEGG koko:K03424
Descriptionhydrolase activity, acting on ester bonds
COG categoryL
BRITEko00000,ko01000
Cross References
External references for this mRNA
DatabaseAccession
GO0016888
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft741_7aEsuBft741_7aEctocarpus subulatus male Bft15bgeneScaffold_195 757052..761615 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft741_7a-0001EsuBft741_7Ectocarpus subulatus male Bft15bpolypeptideScaffold_195 757154..761499 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft741_7a-0001-exonEsuBft741_7a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_195 757052..757224 +
EsuBft741_7a-0001-exonagat-exon-66237Ectocarpus subulatus male Bft15bexonScaffold_195 757467..757598 +
EsuBft741_7a-0001-exonagat-exon-66233Ectocarpus subulatus male Bft15bexonScaffold_195 758148..758224 +
EsuBft741_7a-0001-exonagat-exon-66232Ectocarpus subulatus male Bft15bexonScaffold_195 758667..758722 +
EsuBft741_7a-0001-exonagat-exon-66238Ectocarpus subulatus male Bft15bexonScaffold_195 759181..759581 +
EsuBft741_7a-0001-exonagat-exon-66236Ectocarpus subulatus male Bft15bexonScaffold_195 759891..759932 +
EsuBft741_7a-0001-exonagat-exon-66235Ectocarpus subulatus male Bft15bexonScaffold_195 760859..760953 +
EsuBft741_7a-0001-exonagat-exon-66234Ectocarpus subulatus male Bft15bexonScaffold_195 761315..761615 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft741_7a-0001-exonagat-five_prime_utr-13464Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_195 757052..757153 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft741_7a-0001-cdsEsuBft741_7a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_195 757154..757224 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft741_7a-0001-exonagat-three_prime_utr-20946Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_195 761500..761615 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft741_7a-0001 ID=EsuBft741_7a-0001|Name=EsuBft741_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1277bp|location=Sequence derived from alignment at Scaffold_195:757052..761615+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
AGCAGCAACGAGGGAAGAGGTGTGCGAGGTGAGATCACCGACAGCGGGGA
GGGAAGGAAAGGTTCGGTGGCGGCGGTTCTGCCAGAGGTGGTGCATGTGA
CGATGGGAATCAGAGAGGACGACTGGCATGGAGCTGTGGCGTTCGCCGTT
GGTGCGGAGGATCTCCAGCGCAGGGGTATTATTGCATCCGCCGCGGCACC
AAGAAGGGCAGCGGGAGAGGAAGATGAGAATTCTTCGAAGGCTGAGAAGG
GCGAGTCTACGACTGACTCTTCCTTTTTCAAGTTTGGGCTGGGGCTGCAT
CCATGGTACGCCCACGCGAGGTCCAAGGAGTGGCTGCGCGATCTCACGGC
GCTACTCGAGCAGCATCCGCACGCCCTTGTGGGGCTCGACAAAGTGGCCC
GCACCCCCGACACCAGAAGGGTGGAGTGGGACGATCAGATGGAGCTAGCG
GCGAGGATGTCTCGGCCGGTCTCGGTGCACTGCGTCAAGGCCCACGGGAA
GCTAGTGGACTGCCTTCGAGGGTCAGGGCTAGACGGTCCTGCAACACACA
ATAGCAGCAGCAGCAGCAGCAGGGGCAGCAGCAGCGGCAGCAAAAGCAGC
GGCGGCGGCGGCGGCGGTGCCGACAAAGGGCGGGCGCAGAGCGGAGTTGA
AGGCAGCGGTGGTGGAGGCAGCGTTCTCGCGGAGGGAGGCATTGGCGGCG
ACTTTTGTCGTGGTGGGGGCGGTGATGGGTTGATAGAGCGCAAGACCGGG
TGTCCGCCAGCTGGGGGGCAGAAAGAGGGGCACAATGGCCTGGGAGGGGA
GAGAAAGAGGTGGCGACTTCCGCCGCGAATCGCACTGCACTCCTTCACGG
GATCAGTGGAGGTCGCCAAAGACATTACAAGGCTCGGCGCGCGGAGGGGC
TACGGTAGCGAGGTTTTCTTTGGGTTTTCGGCGGCGGTAAACATGCGGGG
CGACCGTGAGACGAAGCGATTGGTCGATGTGCTGAAAGTTGTCCCCGACT
CTCGGATTTTGATAGAGACCGACAGGCGGGCTCCGGCGAGGGAAGCGGTG
GAGGAACTCCTGCGGGTGTGTGACGCAATTGCGGAAGCCAAGGGGGTTTC
GGCCGAGGAGGCCGCGGCGCTCGCAAGCGGAAACGCCGCCCGGTTTCTGG
CAATGCCGTGATGTTCGAAGGAGGTGGTCTCACCACAACCAAGAGAAAAA
GAAGATCTCGACGTACATGCGATGCGGTGGCGAGTTGGTTCTCTTGCAGG
AAGGAGTTCATTCCCTTTTGTAGAAGG
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protein sequence of EsuBft741_7a-0001

>EsuBft741_7 ID=EsuBft741_7|Name=EsuBft741_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=352bp
MGIREDDWHGAVAFAVGAEDLQRRGIIASAAAPRRAAGEEDENSSKAEKG
ESTTDSSFFKFGLGLHPWYAHARSKEWLRDLTALLEQHPHALVGLDKVAR
TPDTRRVEWDDQMELAARMSRPVSVHCVKAHGKLVDCLRGSGLDGPATHN
SSSSSSRGSSSGSKSSGGGGGGADKGRAQSGVEGSGGGGSVLAEGGIGGD
FCRGGGGDGLIERKTGCPPAGGQKEGHNGLGGERKRWRLPPRIALHSFTG
SVEVAKDITRLGARRGYGSEVFFGFSAAVNMRGDRETKRLVDVLKVVPDS
RILIETDRRAPAREAVEELLRVCDAIAEAKGVSAEEAAALASGNAARFLA
MP
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mRNA from alignment at Scaffold_195:757052..761615+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft741_7a-0001 ID=EsuBft741_7a-0001|Name=EsuBft741_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4564bp|location=Sequence derived from alignment at Scaffold_195:757052..761615+ (Ectocarpus subulatus male Bft15b)
AGCAGCAACGAGGGAAGAGGTGTGCGAGGTGAGATCACCGACAGCGGGGA
GGGAAGGAAAGGTTCGGTGGCGGCGGTTCTGCCAGAGGTGGTGCATGTGA
CGATGGGAATCAGAGAGGACGACTGGCATGGAGCTGTGGCGTTCGCCGTT
GGTGCGGAGGATCTCCAGCGCAGGTGCGGCGTAACAACACCCGAACACTG
ACGAAACAGGCACGGTGAGACGATGAGAAAGATATGGGGCATAGGAGAAA
CTCGTGGCTGGCCGCAGCATGCTCGGTTATAGAAGCTCAGTCTGAAGCAG
CCGCGTGGCTGGCTGTCTCTCTCGTGTTTGTTATTCGTAATCATGCTGCA
TGCTCTTCAGACATGTAAGTTCCGCCCCGTTTCCGCACATCACGCACTGT
CGCGCGGGCACACAGGGGTATTATTGCATCCGCCGCGGCACCAAGAAGGG
CAGCGGGAGAGGAAGATGAGAATTCTTCGAAGGCTGAGAAGGGCGAGTCT
ACGACTGACTCTTCCTTTTTCAAGTTTGGGCTGGGGCTGCATCCATGGTG
CGTCGCGGCAAAGGCGTACATGCTGCGCAAACGATTGGTTGAATCACTTC
TGTACATCCAGTCGCAGTTACCGAGTTTGCTGCTCATGCGATGTCGTCGC
TCAATGAGCGTCGGCGAGACCATGCCGAAAACGGAAATGGGACAGCAACG
ATGTACATGCGATAAATGAAGCGTAAGCCAGCCGTTTGTTCACGAAGAGC
ATTCTTTTTAACTTTGTTCGCACAGCAGTAGCATATAAAAGGAGAGATCC
ACGATGCTCCCAACGTATATCCTTGCTTGTACTCCAGGTCTACGAAAACA
CGAAATACACGCGTGCACGCATCAGCATGTACAGTATCTTGGAAGGGGAC
AGCATCGCATCTCTTTCCCGGCGTAGCACTCTAATTGCCCGTCTTCCCTC
AAGAAATTGACTTGGCTCTCGTAGAGCACTTGAACGACCAGACGTGTACT
GGGGCAGTAGTAGTGTTGACTGCGGTCCTCGGACCCATGCATTGCCTGCA
ATAGACTAGTTATTCAGTCGCTCGGCCGTGGGCTTTAATACATCAGGTAC
GCCCACGCGAGGTCCAAGGAGTGGCTGCGCGATCTCACGGCGCTACTCGA
GCAGCATCCGCACGCCCTTGTGGGTGAAATTGGTGAGCAGGAGAGGCAGG
AGGAGAGTGCCGACAGCGGGAGACACCCCCGCCCCCCGCCCCACTTTTGA
GTTCATTTGCCCAAGCCAACAACTAAGCACACGCATTGAGAATTCGTTGA
GATACAGTACACACATTGTTAGAGTGTAGTCGAGCTTTAAACAGAGAACA
CCCCTATACTGTATAATTGGTTGACTTCAAAATCACCAGTTGTAGAATAT
TCTCCCGCGGAATACCTCTTGTACGAGGCACCGCTTACCCTTGAATACCT
GCATTGAGTTGCGGTTTCAACGAACAAGGGCAGTCAACCAGGGATACTTC
GTGACTGGCGCACTTGCCCACCACCAAAATGCAGACCAAAAGGTGCGTGC
TGTTACAGGAGGTGTCAGATACAATCGGTCGATTTTTGCTTTTTTTGCTC
GCCCGTTGGCGGCAGGGCTCGACAAAGTGGCCCGCACCCCCGACACCAGA
AGGGTGGAGTGGGACGATCAGGTAAGAGGTGCGGGAGGAAACAGGGAGTG
GCTTTTTCCGCTTCGGTCATAAGCTCTTTGACCCCCCATGTCTGCGTGTG
TACCTCCCCAGCATTGCTCTGGTCGGGAGTCCGGTAAACTGGCGTTGCGC
CCGACACCGTCGTCTCGTGTGGCTTGATGCGTTCCTCGGGCTTTCGTATA
AGAGGAGTGGGATCGTGGACGTACTACTGTTAGCTTCGAACCAGCGGAAG
CTATGGTGTCCGATTTCACGATTTTCCGTTTAGCGGTGCACACCTGGCGC
CGTTGCATGCCTGGATTTCGGGGGGGGCGCCCGCACATGGACTCGTTGCC
CACAGGCAACGAAAATAGAGTGCTGGCCATCGATCGATCGATGTGCATGC
GAACTCACTCGTCGGCACTCAACTCTCTTGCCATATTTAATTTTTTCCTC
GATTGAAGCTTTGGGTCTTCCAGACCCAGATGGAGCTAGCGGCGAGGATG
TCTCGGCCGGTCTCGGTGCACTGCGTCAAGGCCCACGGGAAGCTAGTGGA
CTGCCTTCGAGGGTCAGGGCTAGACGGTCCTGCAACACACAATAGCAGCA
GCAGCAGCAGCAGGGGCAGCAGCAGCGGCAGCAAAAGCAGCGGCGGCGGC
GGCGGCGGTGCCGACAAAGGGCGGGCGCAGAGCGGAGTTGAAGGCAGCGG
TGGTGGAGGCAGCGTTCTCGCGGAGGGAGGCATTGGCGGCGACTTTTGTC
GTGGTGGGGGCGGTGATGGGTTGATAGAGCGCAAGACCGGGTGTCCGCCA
GCTGGGGGGCAGAAAGAGGGGCACAATGGCCTGGGAGGGGAGAGAAAGAG
GTGGCGACTTCCGCCGCGAATCGCACTGCAGTGAGTGTGAAAAGAATACC
GGTGAATTAATTCGAACCAGCGGATTTACTGCTGCTTGTGTATGTTGTCG
CGAATGAGTTGCCATCTGCGCTATTCTTTCAAGGAAATGGTGAGACGGTC
CCAAATGAATAACAACGCAAACACTCCCCCCGCTTTTCGCGCCTGTTCCG
TTCGTTGTCCGGTCACTCCCACATCTGTGTGATCCATCGCGTCACATGCT
TGCCTTTTAACTCATGTTCTGCTGCTGATGCTACTGCTGCTGCCGCTGCC
GCTGCTGTCGTGCTGCTGTTGCGGCTGCTGCAACATCAGCTCCTTCACGG
GATCAGTGGAGGTCGCCAAAGACATTACAAGGTGAATCCCCATTGCTGGA
CAGGTGCCCTCTAGACAATATCATGTTGCTAGACCTCTTGAGCAGCGTAG
GAAACTGGACGAATCCTTAGCATTCAGAATGTTCTCAACAAAAATAACAC
TCAGCGATGATCCATTTGGAACTGGGCGTTCATAAGGTAGGCTCAGCTCG
ACGGCAGAAGCGGGTGGGTACTGCAGTCATGGAGGCAGATAGTTCAGGTC
GGGGTTGAGGACTTGATCGCCTCTTCCTTTTTTTGCCGGCCGAGCCAAGT
CTCCACATTGACCAACCGACCCATCGAACCCTCCGGAGGTTTACCATGAC
AACCAGGCCCAATTTACGCACGCACACACTTTTTTTTGTTCTGTCTTTAA
TGCGGAGAGTAGCATAGACTCCCCCACGACGGTCCTTCACGAGGGCCCGG
ATCGTTTAATTCCGTAGCATTTTTTTTTTTGCTTTCAACCGCACTGAGAC
TGACGCCTTTTCATTGATCAGCCGGTTAGCGATGTCGATGCTGAAGAAAC
ACACACGCACCCGCACACACATAACACCCATCCTTGTAGTTCAGAAGCAG
GACGCTGTCGTCCAACTCCTGAGCTCCCTCTGTCGGTGGAAACCTTTGAT
TTTGTAGAAGCGTGTTCGTTCGCGATGCTTCCCGCGCTGTTGTTACCGGC
GCCTTTTCACTGGTCAGCCGGTTAGCGCGGCGTGTGCCAATGCAAGAAAC
GCACACGCAGCCTCCAGCTGCGTGTTTGGTGTAGGCCCCAAAGCCTTTGG
GACACGAAACAGTTTGCAGAGCGCCGACCAACGTGTTCTTAGACTTGTGT
GCCGCCAATAATTTTGTGCCGTCATTGACGCCACAACAAGAATGCAAGGA
TGTAGTAACGAGTACTTCCGGCCATTTTTTCTCGCTGTTGCGGTGCGGTT
GCGTCAGGCTCGGCGCGCGGAGGGGCTACGGTAGCGAGGTTTTCTTTGGG
TTTTCGGCGGCGGTAAACATGCGGGGCGACCGTGAGACGAAGCGATTGGT
CGGTGAGTGTGAGCAGCGGCGAGCGTGTTAGTGAACCGCAGGGCCGCTCT
GCCCAACCAGAAACTTGTTGAAGAAAGGACGCGCGCACTCGAGACATCGA
AGTCGGGAACGGTTTTGTACCCGTCCATGTCCCTCCTCCCCACACACCAC
GCGTTTTGCCCCTCATTCTCTTACCCTGTGTCACTTTTCGTGATCGTGCG
CGCGTGCGTCGATTTGCCGAATGTTTTGTTGCCATGTTCCAGAAGCCGAC
AAACCCTCGTGCTCTTTGCCTCCGCCACACACACCGCTCGTTGTTATTGC
CCCGTCGGGCGACTGCCGTTGCCCCCTCCGCTTGGCATTGTTCGTTCGCG
AAAATAACAACAGATGTGCTGAAAGTTGTCCCCGACTCTCGGATTTTGAT
AGAGACCGACAGGCGGGCTCCGGCGAGGGAAGCGGTGGAGGAACTCCTGC
GGGTGTGTGACGCAATTGCGGAAGCCAAGGGGGTTTCGGCCGAGGAGGCC
GCGGCGCTCGCAAGCGGAAACGCCGCCCGGTTTCTGGCAATGCCGTGATG
TTCGAAGGAGGTGGTCTCACCACAACCAAGAGAAAAAGAAGATCTCGACG
TACATGCGATGCGGTGGCGAGTTGGTTCTCTTGCAGGAAGGAGTTCATTC
CCTTTTGTAGAAGG
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Coding sequence (CDS) from alignment at Scaffold_195:757052..761615+

>EsuBft741_7a-0001 ID=EsuBft741_7a-0001|Name=EsuBft741_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1059bp|location=Sequence derived from alignment at Scaffold_195:757052..761615+ (Ectocarpus subulatus male Bft15b)
ATGGGAATCAGAGAGGACGACTGGCATGGAGCTGTGGCGTTCGCCGTTGG
TGCGGAGGATCTCCAGCGCAGGGGTATTATTGCATCCGCCGCGGCACCAA
GAAGGGCAGCGGGAGAGGAAGATGAGAATTCTTCGAAGGCTGAGAAGGGC
GAGTCTACGACTGACTCTTCCTTTTTCAAGTTTGGGCTGGGGCTGCATCC
ATGGTACGCCCACGCGAGGTCCAAGGAGTGGCTGCGCGATCTCACGGCGC
TACTCGAGCAGCATCCGCACGCCCTTGTGGGGCTCGACAAAGTGGCCCGC
ACCCCCGACACCAGAAGGGTGGAGTGGGACGATCAGATGGAGCTAGCGGC
GAGGATGTCTCGGCCGGTCTCGGTGCACTGCGTCAAGGCCCACGGGAAGC
TAGTGGACTGCCTTCGAGGGTCAGGGCTAGACGGTCCTGCAACACACAAT
AGCAGCAGCAGCAGCAGCAGGGGCAGCAGCAGCGGCAGCAAAAGCAGCGG
CGGCGGCGGCGGCGGTGCCGACAAAGGGCGGGCGCAGAGCGGAGTTGAAG
GCAGCGGTGGTGGAGGCAGCGTTCTCGCGGAGGGAGGCATTGGCGGCGAC
TTTTGTCGTGGTGGGGGCGGTGATGGGTTGATAGAGCGCAAGACCGGGTG
TCCGCCAGCTGGGGGGCAGAAAGAGGGGCACAATGGCCTGGGAGGGGAGA
GAAAGAGGTGGCGACTTCCGCCGCGAATCGCACTGCACTCCTTCACGGGA
TCAGTGGAGGTCGCCAAAGACATTACAAGGCTCGGCGCGCGGAGGGGCTA
CGGTAGCGAGGTTTTCTTTGGGTTTTCGGCGGCGGTAAACATGCGGGGCG
ACCGTGAGACGAAGCGATTGGTCGATGTGCTGAAAGTTGTCCCCGACTCT
CGGATTTTGATAGAGACCGACAGGCGGGCTCCGGCGAGGGAAGCGGTGGA
GGAACTCCTGCGGGTGTGTGACGCAATTGCGGAAGCCAAGGGGGTTTCGG
CCGAGGAGGCCGCGGCGCTCGCAAGCGGAAACGCCGCCCGGTTTCTGGCA
ATGCCGTGA
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