Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft733_9 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 74 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft733_9a-0001 ID=EsuBft733_9a-0001|Name=EsuBft733_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=747bp|location=Sequence derived from alignment at Scaffold_544:45174..46955- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CAAGCCACCGTCGGGCGGGCATTCCTTTAAACTTGGCGTCAATCTGGCAG
GCACGAAGCAGAAATGTCGGAGAAGTCGGAGGAACTGATGGACTTTGAAG
AAGAGGAGGTGGAGAACGCGTCCCAGTCTTCACAGGGGGAGGACGCATCC
CAGTCTTCCCCGGACCATCGTGAAGTCTATGGACAAGGTCTTCTTCGCGA
CATCGAGGCGGCCCGCCCCAAGGCTCTGGCTGCAGCTTACCGCTCGGGCA
GCATCACCCTCCGGGACATTGTGGACGCGGCCCGCCTTTCCTCCCCCCAC
CCCCTTGCCGTCCCCACTGTTGACTTTGACCTAGACGAGGAGGAGTTCGT
GGAGATGTCAAACGATGAAGCCGACGCGTGGACACAACTTCAGACCATCT
TCAACCAGCGGCTGCAGGCTGAGCTCGACCAGGCGGCGGAGGACGCGGAG
CAACGGGCCCGAGATGAGGAGGCCGCTCGGAGGGCTCGGGAGCTAACAGC
TCAGCGGGAGAGGGAGGAAGAAGCTGCGCGGGCCGTGCAACGGGAGCGGG
AGCGCGAGGAAGCGGAGAGGCGCGCGATAGAACAGCGGCGAGCGGCCAGG
AGGCAACTATACAACGACACGGTGAAGGCTCGCCACGAGTTCGAAGAAAG
GAGGAATCGTCTTCGCCCCGTCGAGACATCGGCCGCTCCGTCCCTCTCTG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNN back to topprotein sequence of EsuBft733_9a-0001 >EsuBft733_9 ID=EsuBft733_9|Name=EsuBft733_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=220bp
MDFEEEEVENASQSSQGEDASQSSPDHREVYGQGLLRDIEAARPKALAAA
YRSGSITLRDIVDAARLSSPHPLAVPTVDFDLDEEEFVEMSNDEADAWTQ
LQTIFNQRLQAELDQAAEDAEQRARDEEAARRARELTAQREREEEAARAV
QREREREEAERRAIEQRRAARRQLYNDTVKARHEFEERRNRLRPVETSAA
PSLSAPPPPPPPPPPPPPXX back to topmRNA from alignment at Scaffold_544:45174..46955- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft733_9a-0001 ID=EsuBft733_9a-0001|Name=EsuBft733_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1782bp|location=Sequence derived from alignment at Scaffold_544:45174..46955- (Ectocarpus subulatus male Bft15b)
CAAGCCACCGTCGGGCGGGCATTCCTTTAAACTTGGCGTCAATCTGGCAG
GCACGGTAAGAGAGAATTGGACGCGATTCTTCCCTTTCGTGCGCCGAGGC
ACGTTTTGCTCACGACCACCACACTGCTTGTTGTTAGGTCTCACCACCCA
CGAGAATTTAGACTTCGCCCTTATTGGCGATTACCTGCGGGATGCCGGCT
CATGATGCTTTCGCTCGTCGCTCACGAGACTGGGACCTTGCTAGTGATAC
GCGCATAGGAGGGCGCCGCGGTGATTCTCCCGATTTTTCTTACATGAAAT
GCCCATCACGAGCCATTTTGTCTGCTTCGGGAGTGCATGAAGTTCTTTCT
GTGGCGGATACGTTGTGGCGGCAGCGGCCTGAGCTGCAACCCCTGTTTAG
TGGGGCTCGAGATGACAGCATGCTCCCCGCTTCTACTACTGCTCCTACTG
CTTTTGTGCCGGCTTACCGGCCTGCATCCGCCGACTTCCCCGTGGTGCTC
TCTGATTTGACTCCACGTATTTCGACATGGCGAATTTTATGTGTACACAA
GTTGGGCGTTCGATACACCACCGATCTGCCCTTCATTTTTCGAGAACAAC
TCACGTTTTTTTTTTGGGCCATCGGCTATGCATGAAAAAGACCTCGAGTT
GGAGCCTTTGCTGCCGCGCAAACCCACTGCGGTCTTTCCCCGCACCTCAG
CGCCTGTTGCGGCAAAACGTCGTGCTGCGCTGCGCGAGTTTTGGACAGAC
AAACTAGTCTCCTCGTATAACACAGGCCCTTTTGTGCTAGCTTCTACTGC
TGTTGGTACATGGCATGGAGTGCTTCTGGATGCCTTTTATGATTGGTTGG
ATCCGCTTCAACCAAGGGTACATCAAGCTTTTCTGGCCGGGCGTATGCTC
TCTTGCGGATATCTTCGCTTTCCGTTTGGACCAAGGCAGGACCCTCCGGC
CGTCGCACCCACTTTTACCGTGTCTTCTGTCCCTGGCTCTGCTGTCCCTG
GCTCTGCTGTTGCCCCCACGGCCGTGGCCCCCGCCATTGCTGTTTCTACT
CGTGATCGGGAATACCCCGGTTCTCTCGCTTTTTTTTCAGAAGCAGAAAT
GTCGGAGAAGTCGGAGGAACTGATGGACTTTGAAGAAGAGGAGGTGGAGA
ACGCGTCCCAGTCTTCACAGGGGGAGGACGCATCCCAGTCTTCCCCGGAC
CATCGTGAAGTCTATGGACAAGGTCTTCTTCGCGACATCGAGGCGGCCCG
CCCCAAGGCTCTGGCTGCAGCTTACCGCTCGGGCAGCATCACCCTCCGGG
ACATTGTGGACGCGGCCCGCCTTTCCTCCCCCCACCCCCTTGCCGTCCCC
ACTGTTGACTTTGACCTAGACGAGGAGGAGTTCGTGGAGATGTCAAACGA
TGAAGCCGACGCGTGGACACAACTTCAGACCATCTTCAACCAGCGGCTGC
AGGCTGAGCTCGACCAGGCGGCGGAGGACGCGGAGCAACGGGCCCGAGAT
GAGGAGGCCGCTCGGAGGGCTCGGGAGCTAACAGCTCAGCGGGAGAGGGA
GGAAGAAGCTGCGCGGGCCGTGCAACGGGAGCGGGAGCGCGAGGAAGCGG
AGAGGCGCGCGATAGAACAGCGGCGAGCGGCCAGGAGGCAACTATACAAC
GACACGGTGAAGGCTCGCCACGAGTTCGAAGAAAGGAGGAATCGTCTTCG
CCCCGTCGAGACATCGGCCGCTCCGTCCCTCTCTGCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNN back to topCoding sequence (CDS) from alignment at Scaffold_544:45174..46955- >EsuBft733_9a-0001 ID=EsuBft733_9a-0001|Name=EsuBft733_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=660bp|location=Sequence derived from alignment at Scaffold_544:45174..46955- (Ectocarpus subulatus male Bft15b)
ATGGACTTTGAAGAAGAGGAGGTGGAGAACGCGTCCCAGTCTTCACAGGG
GGAGGACGCATCCCAGTCTTCCCCGGACCATCGTGAAGTCTATGGACAAG
GTCTTCTTCGCGACATCGAGGCGGCCCGCCCCAAGGCTCTGGCTGCAGCT
TACCGCTCGGGCAGCATCACCCTCCGGGACATTGTGGACGCGGCCCGCCT
TTCCTCCCCCCACCCCCTTGCCGTCCCCACTGTTGACTTTGACCTAGACG
AGGAGGAGTTCGTGGAGATGTCAAACGATGAAGCCGACGCGTGGACACAA
CTTCAGACCATCTTCAACCAGCGGCTGCAGGCTGAGCTCGACCAGGCGGC
GGAGGACGCGGAGCAACGGGCCCGAGATGAGGAGGCCGCTCGGAGGGCTC
GGGAGCTAACAGCTCAGCGGGAGAGGGAGGAAGAAGCTGCGCGGGCCGTG
CAACGGGAGCGGGAGCGCGAGGAAGCGGAGAGGCGCGCGATAGAACAGCG
GCGAGCGGCCAGGAGGCAACTATACAACGACACGGTGAAGGCTCGCCACG
AGTTCGAAGAAAGGAGGAATCGTCTTCGCCCCGTCGAGACATCGGCCGCT
CCGTCCCTCTCTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCNNNNN back to top
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