Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft733_5 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 40 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft733_5a-0001 ID=EsuBft733_5a-0001|Name=EsuBft733_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=400bp|location=Sequence derived from alignment at Scaffold_544:105259..106798- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGATGCTTGTTGGGAACGCTGATATCGCGGTGACGTCTCCTCGATCGTC
CTACTCGGCGCTAGCGGCCGCCCGCGGAGGGTCGTCTACACAGAGATACG
GAGGGATTTCATGCACAGAGCAGGTCAACGAGCCGGAGTTTCACTGCCTC
GAGTGCGCCAAGAACGAGTGGAAGGTGGACCAGGTCAAGAATCCCACCGA
GTGGGACAACATTTACCACCTTGTTGAGAGCAATCGAGCGCGCTGTAAAG
GGTAGACTAGACATAGGTGCATAGTATCCTGTCCCCCAACAGGGAATCCC
ATTTGGAGAGAGGGACTTGGGACATGACTACCTTCTTGCCTGCCACATTC
TAGTAGAGCTTCATATACCATCCTGTGTTTAGGCCGGGAGCAGGGATTCT back to topprotein sequence of EsuBft733_5a-0001 >EsuBft733_5 ID=EsuBft733_5|Name=EsuBft733_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=84bp
MMLVGNADIAVTSPRSSYSALAAARGGSSTQRYGGISCTEQVNEPEFHCL
ECAKNEWKVDQVKNPTEWDNIYHLVESNRARCKG back to topmRNA from alignment at Scaffold_544:105259..106798- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft733_5a-0001 ID=EsuBft733_5a-0001|Name=EsuBft733_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1540bp|location=Sequence derived from alignment at Scaffold_544:105259..106798- (Ectocarpus subulatus male Bft15b)
ATGATGCTTGTTGGGAACGCTGATATCGCGGTGACGTCTCCTCGATCGTC
CTACTCGGCGCTAGCGGCCGCCCGCGGAGGGTCGTCTACACAGAGATACG
GTGAGCAACCACTTTGCAGGATGGATACCGCCATACCCCGAAATGCGCCC
AAAGCTAGTGGTCGGGATGGAGTATACAGCTCTGGTGGTGACCCGTAGAC
AAACGGGAAGATTCGCGGATTTCCGGGTTGATGCCGTGGTATCCAAAACA
CATGCAAGAACATTGTTGTTCTACGAAACGGTCCGTGCACGTCATTGGGT
ATATCCGTGGGCGTCCGTGGATGTCCACGCATACGCATTGACACGTCCGT
CATCGTGAACAGGGACACTCCAGCAAACTTCCAACCACAAGTCTGGGGAC
GCCCTTCCTGAGATGTTCATAGACATGCCGTAACACGCGGACGCCCGTGC
GTGGTCCACGTTGGTATTGTAGACTACACAGCCAAATTGTTCATGAACAA
AGGGAGGTCTGCGTGCGCGCCCTCGGATATACGTGGAAGAACAATAATTG
CGCATGTCCACGGGTATGTCGAGGTTCGACGAACTCAGACCGTTCATCAA
CGTTCTTCAGCGTCCATGAAGACGATGTGGACTATATTCATCAAGCGAAC
GGTCCGTGGATATCCGTAGCTGTCCATGGAAAAGTCCAAACAACCGGCCC
GAAGATGTCCGTTTCAACTCATGGAAAAGTTCGCGGCGGTCCGTGAAAGC
ATCCATGGACGTCCGAGATCCATGAACACCGTCGACGGGTGGGTCAACGG
ACGCCCACCAGGCGTGAAAGAGACAAAACCGCTCCTTGTCGAAACATCAA
GCTGTCTCTTTCACCTCAGGACTCATCAAAACAAAACTCGTCGCGGAGAC
GCCAAACAATGTTTTTGATGTTGCGGGTGATACTTATTTTGCACTCGAGC
CAACTCTCACCTTCACTGCCTTCGCTGGTTTGCCCTGATCACTACCGTTG
CTGGCAAGAATGAATGACGACCAGGTGCTTCCTCTGCGCTCGTCATGGCT
CTCCTTCCTTGGAAAATATATATGCAAAAGGCTGTGATTGAAACCGCGAC
GGAAACGAAGCACAAATGCGCCTCACTGGGTACACGCACCGTGCATGATG
TTGTCAGACCTTACTCCTGCTGAAACTGTTTGGTTCATTGTAAAGGTATG
ACTCTCGCTTTCTGCTTTCGTATGTACTTGAACACTGCAGGAGGGATTTC
ATGCACAGAGCAGGTCAACGAGCCGGAGTTTCACTGCCTCGAGTGCGCCA
AGAACGAGTGGAAGGTGGACCAGGTCAAGAATCCCACCGAGTGGGACAAC
ATTTACCACCTTGTTGAGAGCAATCGAGCGCGCTGTAAAGGGTAGACTAG
ACATAGGTGCATAGTATCCTGTCCCCCAACAGGGAATCCCATTTGGAGAG
AGGGACTTGGGACATGACTACCTTCTTGCCTGCCACATTCTAGTAGAGCT
TCATATACCATCCTGTGTTTAGGCCGGGAGCAGGGATTCT back to topCoding sequence (CDS) from alignment at Scaffold_544:105259..106798- >EsuBft733_5a-0001 ID=EsuBft733_5a-0001|Name=EsuBft733_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=255bp|location=Sequence derived from alignment at Scaffold_544:105259..106798- (Ectocarpus subulatus male Bft15b)
ATGATGCTTGTTGGGAACGCTGATATCGCGGTGACGTCTCCTCGATCGTC
CTACTCGGCGCTAGCGGCCGCCCGCGGAGGGTCGTCTACACAGAGATACG
GAGGGATTTCATGCACAGAGCAGGTCAACGAGCCGGAGTTTCACTGCCTC
GAGTGCGCCAAGAACGAGTGGAAGGTGGACCAGGTCAAGAATCCCACCGA
GTGGGACAACATTTACCACCTTGTTGAGAGCAATCGAGCGCGCTGTAAAG
GGTAG back to top
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