EsuBft733_3a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	EsuBft733_3a-0001
Unique Name	EsuBft733_3a-0001
Type	mRNA
Organism	Ectocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_544:130478..133099-
coding sequence from alignment at Scaffold_544:130478..133099-

spliced messenger RNA

>EsuBft733_3a-0001 ID=EsuBft733_3a-0001|Name=EsuBft733_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2622bp|location=Sequence derived from alignment at Scaffold_544:130478..133099- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGTGATCTGAATTGCGTGACGGATAGGTGTGGTGACGCACTCTTCGG
CTGCTCGGCCTCGAGTGGTCTCTGCCCTTCCCTCTTCCCTCTAATACAAG
ACTTTCCCATCTCGGCCCTCACTGGCCGAGCTGCCTTTCTCCACAAACCT
ACAAGCTTCGGCCTACCCGGTTTATCCAACACGCTAGCGTCAACGACTTT
GTCGAGGGTGACTGGGTAGCGCCGATGGGCAGCCGCATGCACGGCTGACG
ACACCCAACCAGACGAAGAGGCCACCAACGGCGAGGGCCTGCACAGCAGC
AGCAACCCCAAGACCTACAGCAGCGCCATCGTCAGCTGCAGCCCGCCGTC
TACTTGGGTAGTAGGCCCGCTCAGGCACGTGATGACTTTTCAGTTTCCTA
CTGGACTGTTGTTGGTATCAACACACCCATTGCGGTGATGCGGTACTCAT
AGTGCCGTCCGATTCTAAACGCGGCAATACGCCGTGCGGTACTGCCGTCA
AACGCCAACGCTAACGCCACCTCCACCTCCACCCGGCACGGCCGTCAAAC
GCTCTCTCCTACTCTTTCTCTAGTATAATCGCGGCAACACGCTGCGCGGT
AATGCCGTCAAACGCCAACGCTTACTCAATCAAAACGCGACAATACGTCG
TGCGGTACTGCCGTCAAACTCCACCGCTCGGTCAAAGGCCGACTACCTGT
AGCACATGGGTAGACCCAACCTAGGTTACCAGTAATCCTCAAAAACTGAT
GCCAGTTTCTAAACTGATGATATGATGTGTGCGTGTAGCATGGTATTAGA
AATAGTATTGTGCGTAATGAAATGCAGTGATCGGCGAGGTTTTTGCTTTG
TCATCCTGACAGCCGTGCTGAGACCAACTTTCTCTCCCCGGCAATAGCGT
GATCAACGTTTTATCTGGGCTCTCTTTGGTAGCTACTTTTTGAGCAGCAG
GTTTAGCCTGATCAAAAATGCGTGATCAACGTTTTATCTGGACTCTTTTT
GGGTAGCAGGTTTAACCTGATCAAAAACTTTTCATGTCTTGGTTATATCA
CCGAGTACCTTAGACGTGTCAAGTCTCATCGACGTGCAACATTGGAACCT
TTTGTTGCAGATGAAAATTCCACAATACAGCAGTAGCACAGACGAAATAC
TGATTTCCGAAGATTGTTACACTTTGTCTTGAGGTTACTATTGTTGTGAG
ATTGCCGTTCCAAAATTGTGAAGGTTTTGACGTAGGATTGATTACCCTAT
GGTTAGAACAGTAGCAGCAGCTTTATTACTATTTTGCAACAGAGGACTAA
TCAACCTCCGTTTCAGGATGATATTCAGCTATTTGTGGTGTGGCGATATC
GCATCGGCAATCAATTTCAGACAAACCATTCCACAAGTAGGGTCCGACGA
CTTGAACGTGTGTTTCATTTATTGATTTTTCTGCTGCAGTCACTACTGTG
CAGAACCGGGGGGAATGTTCATGGTATGTGGTTCTCCTCAGTAGTGCTGG
TTTGTTCGGAACTAACCTGCCGCCATCTTTCCCTCCGAACGCGCGACCTG
CCCTACACCACCGCCGAGTCAATCCTACGGGAGCGACAATTGTTCTTCCT
CCACTTCAGGCGGACGCAAACATCCAAGCTCGAGCCGCGGCCAGCCGGAA
AATATGAAAGGAGATAGGCGACCGCGGCGAAGGCGTGCGAAATATCCGCT
GGGGGGGGGAGAAACAATGGCTTGGGCAATGGGTTAAGCGCTGGAGCTTG
ATGCGCCGGCAAATGTAGGGGTTCGAGTGTTATTGTTTTGGTATTGGATT
GTGTTGGTTGGATTGGATTTTGGTCTTGGTGTTGAATTGATTTCTAGCAT
TTGGGTTGTGAACGTTGTTTTGGCATTGGATTTGATTTGTTTTTGGTGTT
TCGTCGGGATTTATTTGTAGCAGGTTTGTTTTTCTTGAGTTTCGACTGGA
TGAATTTTGAATGTTGTTCTTTTGTTCTATGGTTCTGACTCCAACCCAAA
TCAGGGGGGCGGATCTCCCAGAGCAGGGGGGCACGTTGTTCTTTCGGAAG
GAATTCACTGTAGCTGGTGCTAAGTTTCTAGGGAGAAACAGTAAGGAAAA
TACTCGCTCGCGTATGTTCTGCTCAAATGATCTCAACGCTGAACGAATGT
TTGGGGATGGATGTTATTTGATCGGAAGTGTGAGAGTTGAGGATTGGTAC
CATGCCCAGAAGCGTTTTATCTGCGAAGTGGGCATGAAACGTATACTTTG
GTTTGTGTTCGAAAGTTTGTGTATTTTTGGTAGGATTCGTAGTCGGATGA
ACGTAGTCGGATGCACAACAAAGAAGGCGATTTTCTACGAATTGATCCGT
GTTTTGGAAAGAAAATGAAGAGGAGTTCCACAGACAGGTTTGACTCGATA
GATTGTTTAAGGCTTTCAGTTGTGCGAGGGACATAAGTACTTTGCGGGTG
TCGTTGCGGCGAAGGGCTGAGAAAGGATGGACCAGAGGAAGAGCGTTTTG
CAGAGAAGAAATGAAGACGATGGGACAAGACGTTGTGGGTTCAGGAACAC
TTGCATAATCGAATTCATTCTCGGTTACTTGTTTGTCATGGAGGAGTAGG
ATCCACGTTTTGGGTCTCATGG

protein sequence of EsuBft733_3a-0001

>EsuBft733_3 ID=EsuBft733_3|Name=EsuBft733_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=72bp
MSDLNCVTDRCGDALFGCSASSGLCPSLFPLIQDFPISALTGRAAFLHKP
TSFGLPGLSNTLASTTLSRVTG

mRNA from alignment at Scaffold_544:130478..133099-

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft733_3a-0001 ID=EsuBft733_3a-0001|Name=EsuBft733_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2622bp|location=Sequence derived from alignment at Scaffold_544:130478..133099- (Ectocarpus subulatus male Bft15b)
ATGAGTGATCTGAATTGCGTGACGGATAGGTGTGGTGACGCACTCTTCGG
CTGCTCGGCCTCGAGTGGTCTCTGCCCTTCCCTCTTCCCTCTAATACAAG
ACTTTCCCATCTCGGCCCTCACTGGCCGAGCTGCCTTTCTCCACAAACCT
ACAAGCTTCGGCCTACCCGGTTTATCCAACACGCTAGCGTCAACGACTTT
GTCGAGGGTGACTGGGTAGCGCCGATGGGCAGCCGCATGCACGGCTGACG
ACACCCAACCAGACGAAGAGGCCACCAACGGCGAGGGCCTGCACAGCAGC
AGCAACCCCAAGACCTACAGCAGCGCCATCGTCAGCTGCAGCCCGCCGTC
TACTTGGGTAGTAGGCCCGCTCAGGCACGTGATGACTTTTCAGTTTCCTA
CTGGACTGTTGTTGGTATCAACACACCCATTGCGGTGATGCGGTACTCAT
AGTGCCGTCCGATTCTAAACGCGGCAATACGCCGTGCGGTACTGCCGTCA
AACGCCAACGCTAACGCCACCTCCACCTCCACCCGGCACGGCCGTCAAAC
GCTCTCTCCTACTCTTTCTCTAGTATAATCGCGGCAACACGCTGCGCGGT
AATGCCGTCAAACGCCAACGCTTACTCAATCAAAACGCGACAATACGTCG
TGCGGTACTGCCGTCAAACTCCACCGCTCGGTCAAAGGCCGACTACCTGT
AGCACATGGGTAGACCCAACCTAGGTTACCAGTAATCCTCAAAAACTGAT
GCCAGTTTCTAAACTGATGATATGATGTGTGCGTGTAGCATGGTATTAGA
AATAGTATTGTGCGTAATGAAATGCAGTGATCGGCGAGGTTTTTGCTTTG
TCATCCTGACAGCCGTGCTGAGACCAACTTTCTCTCCCCGGCAATAGCGT
GATCAACGTTTTATCTGGGCTCTCTTTGGTAGCTACTTTTTGAGCAGCAG
GTTTAGCCTGATCAAAAATGCGTGATCAACGTTTTATCTGGACTCTTTTT
GGGTAGCAGGTTTAACCTGATCAAAAACTTTTCATGTCTTGGTTATATCA
CCGAGTACCTTAGACGTGTCAAGTCTCATCGACGTGCAACATTGGAACCT
TTTGTTGCAGATGAAAATTCCACAATACAGCAGTAGCACAGACGAAATAC
TGATTTCCGAAGATTGTTACACTTTGTCTTGAGGTTACTATTGTTGTGAG
ATTGCCGTTCCAAAATTGTGAAGGTTTTGACGTAGGATTGATTACCCTAT
GGTTAGAACAGTAGCAGCAGCTTTATTACTATTTTGCAACAGAGGACTAA
TCAACCTCCGTTTCAGGATGATATTCAGCTATTTGTGGTGTGGCGATATC
GCATCGGCAATCAATTTCAGACAAACCATTCCACAAGTAGGGTCCGACGA
CTTGAACGTGTGTTTCATTTATTGATTTTTCTGCTGCAGTCACTACTGTG
CAGAACCGGGGGGAATGTTCATGGTATGTGGTTCTCCTCAGTAGTGCTGG
TTTGTTCGGAACTAACCTGCCGCCATCTTTCCCTCCGAACGCGCGACCTG
CCCTACACCACCGCCGAGTCAATCCTACGGGAGCGACAATTGTTCTTCCT
CCACTTCAGGCGGACGCAAACATCCAAGCTCGAGCCGCGGCCAGCCGGAA
AATATGAAAGGAGATAGGCGACCGCGGCGAAGGCGTGCGAAATATCCGCT
GGGGGGGGGAGAAACAATGGCTTGGGCAATGGGTTAAGCGCTGGAGCTTG
ATGCGCCGGCAAATGTAGGGGTTCGAGTGTTATTGTTTTGGTATTGGATT
GTGTTGGTTGGATTGGATTTTGGTCTTGGTGTTGAATTGATTTCTAGCAT
TTGGGTTGTGAACGTTGTTTTGGCATTGGATTTGATTTGTTTTTGGTGTT
TCGTCGGGATTTATTTGTAGCAGGTTTGTTTTTCTTGAGTTTCGACTGGA
TGAATTTTGAATGTTGTTCTTTTGTTCTATGGTTCTGACTCCAACCCAAA
TCAGGGGGGCGGATCTCCCAGAGCAGGGGGGCACGTTGTTCTTTCGGAAG
GAATTCACTGTAGCTGGTGCTAAGTTTCTAGGGAGAAACAGTAAGGAAAA
TACTCGCTCGCGTATGTTCTGCTCAAATGATCTCAACGCTGAACGAATGT
TTGGGGATGGATGTTATTTGATCGGAAGTGTGAGAGTTGAGGATTGGTAC
CATGCCCAGAAGCGTTTTATCTGCGAAGTGGGCATGAAACGTATACTTTG
GTTTGTGTTCGAAAGTTTGTGTATTTTTGGTAGGATTCGTAGTCGGATGA
ACGTAGTCGGATGCACAACAAAGAAGGCGATTTTCTACGAATTGATCCGT
GTTTTGGAAAGAAAATGAAGAGGAGTTCCACAGACAGGTTTGACTCGATA
GATTGTTTAAGGCTTTCAGTTGTGCGAGGGACATAAGTACTTTGCGGGTG
TCGTTGCGGCGAAGGGCTGAGAAAGGATGGACCAGAGGAAGAGCGTTTTG
CAGAGAAGAAATGAAGACGATGGGACAAGACGTTGTGGGTTCAGGAACAC
TTGCATAATCGAATTCATTCTCGGTTACTTGTTTGTCATGGAGGAGTAGG
ATCCACGTTTTGGGTCTCATGG

Coding sequence (CDS) from alignment at Scaffold_544:130478..133099-

>EsuBft733_3a-0001 ID=EsuBft733_3a-0001|Name=EsuBft733_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=219bp|location=Sequence derived from alignment at Scaffold_544:130478..133099- (Ectocarpus subulatus male Bft15b)
ATGAGTGATCTGAATTGCGTGACGGATAGGTGTGGTGACGCACTCTTCGG
CTGCTCGGCCTCGAGTGGTCTCTGCCCTTCCCTCTTCCCTCTAATACAAG
ACTTTCCCATCTCGGCCCTCACTGGCCGAGCTGCCTTTCTCCACAAACCT
ACAAGCTTCGGCCTACCCGGTTTATCCAACACGCTAGCGTCAACGACTTT
GTCGAGGGTGACTGGGTAG