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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7FM16 |
| ProteomeId | EsuBft652_5 |
| Protein domains | IPR011990 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 238 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.62e-103 |
| EggNOG OGs | 2C1F8@1|root,2S2PK@2759|Eukaryota |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-01_010270.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Domain of unknown function (DUF4807) |
| COG category | S |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0031227 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft652_5a-0001 ID=EsuBft652_5a-0001|Name=EsuBft652_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2386bp|location=Sequence derived from alignment at Scaffold_614:102005..106733+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
AGCCAGCTTCACTACCGGTCACTTCCCCAGCCGTTGCTTGTACGGGGGGT GGGACGCCGATGATGTCGATCCCACCCGTTGTGCGGCTGTCACAAGCGCT CTACAATGACGTACCTTCTCCCGCCCAATCTCGATCAGGAGGTCAACGAG CATCGCCCGGGCGCACTGCGAGTTTGGCGGCTGCAGCTTCCATTGGAGCA ACCGAGACAAATAGCCGACCTGCCGGTATGGTGCGCTTGCTTCTCCCTAG GACGTTCGCGGTGGCCGACCATTCTTATCACGAAAGCTTGTTAACAGCCG GAGGTGGTGCGGTACGAGAGCGAGCAGCTGAGCACTTTGTCCGCGGTGAT GCGGTCGTAACGAAGGTTCAGCAAAACCTTGTCCGCATCGAAACTACTGT CGGTCCTCAGGACGAGCGCGATGGCAGCGGCGGCAACAGCTCCTGTGGCA CGGCCTCGTCCCCTGTAACGAACAACGGCATTTGTACCAGTTCACAGCAA CCAGCATGTTCTATGCAGTCATCGGCAACGGTAGCACCAGGTGGGGCGGC GCTTGTCGTAGTTGAGAGTGTTCTCGGATTCTCGGCCGTGCAATCCCTGC TCGATCGGTCCTACGCGGAAAACATGCGCCTGTCCGCGAATCCAAGCACG GCAGGAAGCGCTATCGAGCCTGAGCAGCCTCCAGGAGATGAACCTCCCCG CGGCTGCGCCGGCACAACTGGACCTGCTGATGTGTGCAGCCGTCGAGACG TTGATGCCGACGGGAATAAGTCGTTCGGGGTAACACGCTGTTCTACTAGC AATAGCAGCAATAGCAGCACGTGCGGCGTCTCCGCAGCCGTTGGGCGCTT GGTGGCGTGGCTCCGGATTGCGGCGGCGATTACCGGGCTACAAGAACGGG GGCGGCCAGGTGGTTTCAACAGCAGCGGTAGTGTGCTCGGTGGCAGCACC AGTGCTTGCGCCAGCAGCGTCGTAGAGACGGCAATGAACGCGAGAAGAAC GGACAGAACAGCGACGGGGTTCTCTATGTGTGGTCTTGATGTTGAAGATG ACTTGCTGCTCGCGGCGGCGGTCGCAACGGCGGGCGGGCGAGCTCATGGT ACGTGGTACAAGGTGACCGGGCGATGCGACAGGGGCGAGCGGTGGATAGC CTTCGACCTTGAGCCGACAGCGGGACCCCCAGGACAACTTGAACGGCGAA CGCCGGAGGGTGGGGATAGCGGGAACGGGGCGGCAGGGGAAGTACTACAA GTCAGGCTGATTTGTCATCCGCTGGTGACGATGGTACCGGACATAAGGTG GTGCCTCCAACTGATCAGTCAAGCCAAGGCCATCGCTACTCTCTTGAACG CCAACGCAAAGCTTAGCACCCTAGGGGGAGGCTACTTCCTCACCCGGCAG GTCGGACAGGCAATACGTCTAGCCCTTGCCCAATCAGAGGTAGCGGAAGC ACTCGGGGATTTGCGGCTCGCCGGGAAATGCCGTGTCAATGTGGCCTACA ACTATATCTGGCTGGGACAGTACGATGAGGCACAACGTATCATCAACGCG CAGGTGGCTGCGTCCCGCGCCATCCAAGACGAGGAGCTCGAAAACATGGC TTCCATCGCCGGTCGCTTCTTGAAGAGGTCAAGGAGGGCCAACCACCGCT TGCTGCAAAGCCAGCTTGATGCCCCCAGTGGAGGAGGCAGCAGTGGTGAT GAGGGTGCAAAGAACGGTGTTAGCCAGGGATGGGTCCGGCAAAAAATAGA CGTAAGGACAGATGAGTGGCACCGTGTGCGTGCCCTGCCAATGTACTACA GTAGTGGTTGAGCCACCCACGTGGGTTTGGGAGGCGAGGCAAATCGAGGT CAACGTCGTGTCGCCTTTGTATGTCCAAAGTGAAATTGCTTTACATAGTA CGTACAACCTTAGCTTCGAATTTTCCTCCGCCGTGGTCGAATTGCTCGAA TGTGTTGATTTTTTTCGATCTGAAAGTCTAAACGAGTTACACCTCGGACT TTAGTTGTCGACGTCATCCAGCCACGGGATCGAGTCTTGTCCCTGAAGTT CCGGAGAGGGAGAAGAGTACAATGCCGGAAGGGCTGTTTTCGCCTCCTCG AGAGTTGCTCGGAGGGTCTTGCAGCGGCGGCACCGAGGTGGAATAGTTTG ACACTGCTGTGTGTGCCACTCTTTCGATGCTCTTTAGCGGTGGCGGAGCC TTCATATTGCACTGGGGTGCTACGACGAGGCAGGGACGCTACGAACTGTG TGAAACGATCGAACTTTCAGTCACGTATGGGTATGTTCGTTGAGCCTTTG AGGGGGTGCGTTTGGGTGCGGACCTGGTCAGAGGATAGTCGAGGTGGATA CGCGAGAGAACTTGCTTGTGTACTCGGCAGGATACG back to topprotein sequence of EsuBft652_5a-0001 >EsuBft652_5 ID=EsuBft652_5|Name=EsuBft652_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=583bp
MMSIPPVVRLSQALYNDVPSPAQSRSGGQRASPGRTASLAAAASIGATET NSRPAGMVRLLLPRTFAVADHSYHESLLTAGGGAVRERAAEHFVRGDAVV TKVQQNLVRIETTVGPQDERDGSGGNSSCGTASSPVTNNGICTSSQQPAC SMQSSATVAPGGAALVVVESVLGFSAVQSLLDRSYAENMRLSANPSTAGS AIEPEQPPGDEPPRGCAGTTGPADVCSRRDVDADGNKSFGVTRCSTSNSS NSSTCGVSAAVGRLVAWLRIAAAITGLQERGRPGGFNSSGSVLGGSTSAC ASSVVETAMNARRTDRTATGFSMCGLDVEDDLLLAAAVATAGGRAHGTWY KVTGRCDRGERWIAFDLEPTAGPPGQLERRTPEGGDSGNGAAGEVLQVRL ICHPLVTMVPDIRWCLQLISQAKAIATLLNANAKLSTLGGGYFLTRQVGQ AIRLALAQSEVAEALGDLRLAGKCRVNVAYNYIWLGQYDEAQRIINAQVA ASRAIQDEELENMASIAGRFLKRSRRANHRLLQSQLDAPSGGGSSGDEGA KNGVSQGWVRQKIDVRTDEWHRVRALPMYYSSG back to topmRNA from alignment at Scaffold_614:102005..106733+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft652_5a-0001 ID=EsuBft652_5a-0001|Name=EsuBft652_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4729bp|location=Sequence derived from alignment at Scaffold_614:102005..106733+ (Ectocarpus subulatus male Bft15b) AGCCAGCTTCACTACCGGTCACTTCCCCAGCCGTTGCTTGTACGGGGGGT
GGGACGCCGATGATGTCGATCCCACCCGTTGTGCGGCTGTCACAAGCGCT
CTACAATGACGTACCTTCTCCCGCCCAATCTCGATCAGGAGGTCAACGAG
CATCGCCCGGGCGCACTGCGAGTTTGGCGGCTGCAGCTTCCATTGGAGCA
ACCGAGACAAATAGCCGACCTGCCGGTATGGTGCGCTTGCTTCTCCCTAG
GACGTTCGCGGTGGCCGACCATTCTTATCACGAAAGCTTGTTAACAGCCG
GAGGTGGTGCGGTACGAGAGCGAGCAGCTGAGCACTTTGTCCGCGGTGAT
GCGGTCGTAACGAAGGTTCAGCAAAACCTTGTCCGCATCGAAACTACTGT
CGGTCCTCAGGACGAGCGCGATGGCAGCGGCGGCAACAGCTCCTGTGGCA
CGGCCTCGTCCCCTGTAACGAACAACGGCATTTGTACCAGTTCACAGCAA
CCAGCATGTTCTATGCAGTCATCGGCAACGGTAGCACCAGGTGGGGCGGC
GCTTGTCGTAGTTGAGAGTGTTCTCGGATTCTCGGCCGTGCAATCCCTGC
TCGATCGGTCCTACGCGGAAAACATGCGCCTGTCCGCGAATCCAAGCACG
GCAGGAAGCGCTATCGAGCCTGAGCAGCCTCCAGGAGATGAACCTCCCCG
CGGCTGCGCCGGCACAACTGGACCTGCTGATGTGTGCAGCCGTCGAGACG
TTGATGCCGACGGGAATAAGTCGTTCGGGGTAACACGCTGTTCTACTAGC
AATAGCAGCAATAGCAGCACGTGCGGCGTCTCCGCAGCCGTTGGGCGCTT
GGTGGCGTGGCTCCGGATTGCGGCGGCGATTACCGGGCTACAAGAACGGG
GGCGGCCAGGTGGTTTCAACAGCAGCGGTAGTGTGCTCGGTGGCAGCACC
AGTGCTTGCGCCAGCAGCGTCGTAGAGACGGCAATGAACGCGAGAAGAAC
GGACAGAACAGCGACGGGGTTCTCTATGTGTGGTCTTGATGTTGAAGATG
ACTTGCTGCTCGCGGCGGCGGTCGCAACGGCGGGCGGGCGAGCTCATGGT
ACGTGGTACAAGGTGACCGGGCGATGCGACAGGGGCGAGCGGTGGATAGC
CTTCGACCTTGAGCCGACAGCGGGACCCCCAGGTGATGGACGGGTGTGCG
AATTGTTTCCGCGGAGAACGAACCGCTGCGGTCGCGCTTGGAGGACGTGT
GTTGTAACAGCCGAGTGATCATCTGCTGACGAAGTGTGACACAATCCTTG
CGGTCATGGTTGGCAAGGTGTGGGTTGAGTTGGCGTTTCTGTGTTAATAT
TTTTGTGACTGTTGTTGTGGCGGCTGTGCGCTCTCGTTGCTTTGTGCCTG
CTGCGCCCTGGAACCATCAATGCAACTGTCCAGCGCTGTGTGGACCTGGT
GGTGATTGCGTTGCCGAAATTGCCCCGTCGGAGTCTTACCATATGCAGAA
TTAGAAGAAATTTTGCTTTAGTTTGACCCCCACGTCGGCGGTGTCACGTA
TCTGTGTTGGCATGCTACAACGCAAAGGTTGTCCCCGACGGGTACGCTAT
GCTATGATTCTCAGTGTGGACACCAGTACAGTTTTCGCTCGGGAGGCAAC
GACGACAACATGAGCCAACAACCACAGGAGCGCATGTAGCTCAGAGCGCA
AGTCGTAGCACCGCCTGCGCCAGTCTCCAGAACTTTTCCGTGACGATGAT
TCTTTGCCCGCTGTGATGCACTAGCGCACAACTATACTTGCCAAGAACGG
AACGCTAGCACAATTCATCACAGTTACTCGTGAAGCGACCTACATTCACG
GTGTGTATCATTGTCTGGTCCCCATTGTACAGGACAACTTGAACGGCGAA
CGCCGGAGGGTGGGGATAGCGGGAACGGGGCGGCAGGGGAAGTACTACAA
GTCAGGCTGATTTGTCATCCGCTGGTGACGATGGTACCGGACATAAGGTG
AGACTTGCGCGTGAATGGTAGACAAACATATGATTCAAGGCAGTTTTCTG
AGGGAGAGGCACTTGTTTGTTTGGCCATGGCACGATAACCTGTAGAGGTG
AAGCACCGTGAATCCATTCATTACTACATCAATACCCTCTCCCATACCAG
CACACTGCAACTTGTAGCGATACTGCAACATACACGTGAACGCACTGGCA
TGAAGTATAGTGCAACTAATTGGTCTCTTGACTTCATATTTGGCACTTGT
TTCAGCAGTGGGCACCAATCGGTACGATACTTGGGCCATTTCGAGTGTGG
TCGAATACCTAAAATGCGGAGGCGTGGTACCCTGCTTGTGTACGCATAAA
CCTAGCCTAGGTTTAGTCGAGCCAACGACGTAGACTGCTTGGGTATGCGA
CACAAGGATCCCACGGTCGGGGTGGCTGTCACCGGCTACCTTGGGCAGGC
AGACTTCTGTGTTGAAGCTTGGGCAAGGAAAGAGGGCCCAGAAAGGGAGT
TTACACGGGCAGGGCCGGCCCGCTCACGCCAGTGATTAGCATGTGGGAGA
TTCGTGCATCCGTTAGTGCGAGGTCCTATGGTTCTCGAAACGCTAATGGG
GATCGTTCCCTTCCAAGCACACGAATCTACATTTCGAATACACTTGTCAC
CCACACTACGGGAATCGATCGTATGTGTTTGTGCAGGTGGTGCCTCCAAC
TGATCAGTCAAGCCAAGGCCATCGCTACTCTCTTGAACGCCAACGCAAAG
CTTAGCACCCTAGGGGGAGGCTACTTCCTCACCCGGCAGGTCGGACAGGC
AATACGTCTAGCCCTTGCCCAATCAGAGGTAAGAGTGTAGTGGACCCGAT
GTGCCCATTTCTCAAAGTCGCCCGTGTGTATAGCCTGTATCGCGACGCAC
CTCTGAATTGACAAAGGGTCGCACCCATTCCACAGCAGAGAACTTGTCGA
TCACCCCTGATCTTCGGTGCGCGTTTAATCTATTGCGTGGTTAGTACACG
CAGTACCGATACATTCTCACCCATACACCGGCGGCGGTGTCCGAGGTTGT
TTGAAATGCGACGAATTGCTACTGGGGACCCCGGGAAGTAGATGCCATTG
GTGCCCCAAAAGTACCACCTAAACGGGCACTTCTCACCCTGTCCATGTGG
CATACGCAACACGAAAGGAATCTGGGCATCTCATTCGTCCATGCTTTCAC
CTACGGGTTGTGGGCACACCCTCCGTTCTGGATTTTGCTTTCGAAGGTAG
CGGAAGCACTCGGGGATTTGCGGCTCGCCGGGAAATGCCGTGTCAATGTG
GCCTACAACTATATCTGGCTGGGACAGTACGATGAGGCACAACGTATCAT
CAACGCGCAGGTTGGTCAGGGTCCCATGAACAGGCTTGGTGGCGTGTTTT
GTACCATTACCTTCGTACTCCGGTTCGCATGTTGTACCGAAGTAGGTGGC
CTAAAACTGTGGCTGCAGTGTTGCAAAGGACAAAACAACTCGTCTCCTGT
TACAAGATAATGAGCGTTTGGGTTTCCGAAAGAGAAGGTGTTCCCACATT
TTTCGTTGGGGCAATATTCATGGGTGAGCCATGTTGTCCGAGCACTGAAC
TTGTGCTCTTCGAGTATCAACACGTACAGACGACTCGCAAGTTTGCGAGC
ACAGGGTTTTTTGGTATTTTGTGTGTCGCTAGTGTAGGTCGTGGTTCGTT
TCTTCAACACACACGCTTCTGACCGCGCACATCCGTCTTTGGCGCCATTG
GTTCACCGCTGGATCACGTTGGAACCCTCGCCAAACCGTGTTCAAAGTTT
CCTGGGTTCTTCAGTGACATGAACTTGTGTTCAAAACAGATAATTGACGG
GGAAGACGATCTCAACGCTTTCATTCAACGTGTTACCAACGCACAGGTGG
CTGCGTCCCGCGCCATCCAAGACGAGGAGCTCGAAAACATGGCTTCCATC
GCCGGTCGCTTCTTGAAGAGGTCAAGGAGGGCCAACCACCGCTTGCTGCA
AAGCCAGCTTGATGCCCCCAGTGGAGGAGGCAGCAGTGGTGATGAGGGTG
CAAAGAACGGTGTTAGCCAGGGATGGGTCCGGCAAAAAATAGACGTAAGG
ACAGATGAGTGGCACCGTGTGCGTGCCCTGCCAATGTACTACAGTAGTGG
TTGAGCCACCCACGTGGGTTTGGGAGGCGAGGCAAATCGAGGTCAACGTC
GTGTCGCCTTTGTATGTCCAAAGTGAAATTGCTTTACATAGTACGTACAA
CCTTAGCTTCGAATTTTCCTCCGCCGTGGTCGAATTGCTCGAATGTGTTG
ATTTTTTTCGATCTGAAAGTCTAAACGAGTTACACCTCGGACTTTAGTTG
TCGACGTCATCCAGCCACGGGATCGAGTCTTGTCCCTGAAGTTCCGGAGA
GGGAGAAGAGTACAATGCCGGAAGGGCTGTTTTCGCCTCCTCGAGAGTTG
CTCGGAGGGTCTTGCAGCGGCGGCACCGAGGTGGAATAGTTTGACACTGC
TGTGTGTGCCACTCTTTCGATGCTCTTTAGCGGTGGCGGAGCCTTCATAT
TGCACTGGGGTGCTACGACGAGGCAGGGACGCTACGAACTGTGTGAAACG
ATCGAACTTTCAGTCACGTATGGGTATGTTCGTTGAGCCTTTGAGGGGGT
GCGTTTGGGTGCGGACCTGGTCAGAGGATAGTCGAGGTGGATACGCGAGA
GAACTTGCTTGTGTACTCGGCAGGATACG back to topCoding sequence (CDS) from alignment at Scaffold_614:102005..106733+ >EsuBft652_5a-0001 ID=EsuBft652_5a-0001|Name=EsuBft652_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1752bp|location=Sequence derived from alignment at Scaffold_614:102005..106733+ (Ectocarpus subulatus male Bft15b) ATGATGTCGATCCCACCCGTTGTGCGGCTGTCACAAGCGCTCTACAATGA CGTACCTTCTCCCGCCCAATCTCGATCAGGAGGTCAACGAGCATCGCCCG GGCGCACTGCGAGTTTGGCGGCTGCAGCTTCCATTGGAGCAACCGAGACA AATAGCCGACCTGCCGGTATGGTGCGCTTGCTTCTCCCTAGGACGTTCGC GGTGGCCGACCATTCTTATCACGAAAGCTTGTTAACAGCCGGAGGTGGTG CGGTACGAGAGCGAGCAGCTGAGCACTTTGTCCGCGGTGATGCGGTCGTA ACGAAGGTTCAGCAAAACCTTGTCCGCATCGAAACTACTGTCGGTCCTCA GGACGAGCGCGATGGCAGCGGCGGCAACAGCTCCTGTGGCACGGCCTCGT CCCCTGTAACGAACAACGGCATTTGTACCAGTTCACAGCAACCAGCATGT TCTATGCAGTCATCGGCAACGGTAGCACCAGGTGGGGCGGCGCTTGTCGT AGTTGAGAGTGTTCTCGGATTCTCGGCCGTGCAATCCCTGCTCGATCGGT CCTACGCGGAAAACATGCGCCTGTCCGCGAATCCAAGCACGGCAGGAAGC GCTATCGAGCCTGAGCAGCCTCCAGGAGATGAACCTCCCCGCGGCTGCGC CGGCACAACTGGACCTGCTGATGTGTGCAGCCGTCGAGACGTTGATGCCG ACGGGAATAAGTCGTTCGGGGTAACACGCTGTTCTACTAGCAATAGCAGC AATAGCAGCACGTGCGGCGTCTCCGCAGCCGTTGGGCGCTTGGTGGCGTG GCTCCGGATTGCGGCGGCGATTACCGGGCTACAAGAACGGGGGCGGCCAG GTGGTTTCAACAGCAGCGGTAGTGTGCTCGGTGGCAGCACCAGTGCTTGC GCCAGCAGCGTCGTAGAGACGGCAATGAACGCGAGAAGAACGGACAGAAC AGCGACGGGGTTCTCTATGTGTGGTCTTGATGTTGAAGATGACTTGCTGC TCGCGGCGGCGGTCGCAACGGCGGGCGGGCGAGCTCATGGTACGTGGTAC AAGGTGACCGGGCGATGCGACAGGGGCGAGCGGTGGATAGCCTTCGACCT TGAGCCGACAGCGGGACCCCCAGGACAACTTGAACGGCGAACGCCGGAGG GTGGGGATAGCGGGAACGGGGCGGCAGGGGAAGTACTACAAGTCAGGCTG ATTTGTCATCCGCTGGTGACGATGGTACCGGACATAAGGTGGTGCCTCCA ACTGATCAGTCAAGCCAAGGCCATCGCTACTCTCTTGAACGCCAACGCAA AGCTTAGCACCCTAGGGGGAGGCTACTTCCTCACCCGGCAGGTCGGACAG GCAATACGTCTAGCCCTTGCCCAATCAGAGGTAGCGGAAGCACTCGGGGA TTTGCGGCTCGCCGGGAAATGCCGTGTCAATGTGGCCTACAACTATATCT GGCTGGGACAGTACGATGAGGCACAACGTATCATCAACGCGCAGGTGGCT GCGTCCCGCGCCATCCAAGACGAGGAGCTCGAAAACATGGCTTCCATCGC CGGTCGCTTCTTGAAGAGGTCAAGGAGGGCCAACCACCGCTTGCTGCAAA GCCAGCTTGATGCCCCCAGTGGAGGAGGCAGCAGTGGTGATGAGGGTGCA AAGAACGGTGTTAGCCAGGGATGGGTCCGGCAAAAAATAGACGTAAGGAC AGATGAGTGGCACCGTGTGCGTGCCCTGCCAATGTACTACAGTAGTGGTT GA back to top
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