Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft5994_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 125 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft5994_2a-0001 ID=EsuBft5994_2a-0001|Name=EsuBft5994_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1253bp|location=Sequence derived from alignment at Scaffold_265:41020..42272+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTCAGCATCTTGTCTCAACCCGCGTGCAATCCCGCATACGCGGTGTAC
CTATGCCCTCGGTGCTCTTATCCAGGTCCTCCCGTTTACAGTTCGCAGCA
CACATCTACAACGCGTACACGGCCGAAATCCAGCCGTTGTTGATGCCCCG
CGGCTTCGGGCCGACGCTCTAAAGTTTTGGTACCCGGTCGGGCTGCGATT
TCAGGGCCCGGCGTACAACGGGGAGAGACGTGGAGCCGAGTTTCCAACCT
CTGGAGGGAGTCCGCCCTTGTGTGCTTCTCGAGATCGTCAACATCTGGGG
GCCACACCGACACCTGACACCCCCAGGTGACCGCTCTCTCAACGAAAACG
AGCCTTCCATAGCCCTAACAACTCCTCAAGTTCGCACGGGTCTGTAGAAG
ATGGAGTCGTGTTCGATCCCAGCTGAGGCCAGTTGCCCTTTTCGCATCTG
TTTTTCTTTTCCCGGCAGCCTTGGTCCTCCTTTGTGGCATTCTCACATAC
TGCAGCAATTTACCGTCGAAGAACACGTTTTACAAATTTCTTCCCGTTAT
GCAGGTTTTGGACATTGAAACCGGTACGCGTATTCACGCTTGTTGATACT
CATAACGGGCCTTGAAAGGTAAACTACGCGGGGTGCAGCAAGCACGTTCT
GGACGTTACTTGGGGCACTGGGTAGTCGGCCGTGTTAGACCGGGAGAGAG
AGGTTGAGAGAGAGCTGGAGAGAGAGTGGGAGAAGGAACCTTGATTGGAG
AGAGACGGTGGTGGTGGTGGAGAGAGAGGGTGGTGGTGGTGGAGAGAGAC
GGTGGTGGTGGTGGAGAGAGAGAGGGAAGAAGTGCGCAGCACGCACGCAA
GCTCCATCGCACCAACCACGCCAAAAGGATCCCCGTGACTGCACCGGTGG
TACCCTACTACACACGAAATTCCCAACACGTATCCCCTGGGATCCTCACG
ACCAGATACTGCTGCGAGTATATCTAACATCCCCCCTGCTCGCAACAGTC
TCTCACTGAAAACTTCGCTAACACCCGATATCTCAACCAAAAGACGTCTT
TCCCAGACGATATGCCACCAAGACTTTACCAGAATAACATAAGAGAGAGA
AAAACAATTCAAAGGAATATGAATGCTGCATCGCGCGTAACAAATACTTG
GCGCGGGAAATGAAAGAAAACGGGAAACAAAACGAGAAGCAAAACAAAAC
CAAAACACAACCTATCAGAAAAACAACAAAATGTTCATGCCGAATTCATC
GCA back to topprotein sequence of EsuBft5994_2a-0001 >EsuBft5994_2 ID=EsuBft5994_2|Name=EsuBft5994_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=109bp
MSASCLNPRAIPHTRCTYALGALIQVLPFTVRSTHLQRVHGRNPAVVDAP
RLRADALKFWYPVGLRFQGPAYNGERRGAEFPTSGGSPPLCASRDRQHLG
ATPTPDTPR back to topmRNA from alignment at Scaffold_265:41020..42272+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft5994_2a-0001 ID=EsuBft5994_2a-0001|Name=EsuBft5994_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1253bp|location=Sequence derived from alignment at Scaffold_265:41020..42272+ (Ectocarpus subulatus male Bft15b)
ATGTCAGCATCTTGTCTCAACCCGCGTGCAATCCCGCATACGCGGTGTAC
CTATGCCCTCGGTGCTCTTATCCAGGTCCTCCCGTTTACAGTTCGCAGCA
CACATCTACAACGCGTACACGGCCGAAATCCAGCCGTTGTTGATGCCCCG
CGGCTTCGGGCCGACGCTCTAAAGTTTTGGTACCCGGTCGGGCTGCGATT
TCAGGGCCCGGCGTACAACGGGGAGAGACGTGGAGCCGAGTTTCCAACCT
CTGGAGGGAGTCCGCCCTTGTGTGCTTCTCGAGATCGTCAACATCTGGGG
GCCACACCGACACCTGACACCCCCAGGTGACCGCTCTCTCAACGAAAACG
AGCCTTCCATAGCCCTAACAACTCCTCAAGTTCGCACGGGTCTGTAGAAG
ATGGAGTCGTGTTCGATCCCAGCTGAGGCCAGTTGCCCTTTTCGCATCTG
TTTTTCTTTTCCCGGCAGCCTTGGTCCTCCTTTGTGGCATTCTCACATAC
TGCAGCAATTTACCGTCGAAGAACACGTTTTACAAATTTCTTCCCGTTAT
GCAGGTTTTGGACATTGAAACCGGTACGCGTATTCACGCTTGTTGATACT
CATAACGGGCCTTGAAAGGTAAACTACGCGGGGTGCAGCAAGCACGTTCT
GGACGTTACTTGGGGCACTGGGTAGTCGGCCGTGTTAGACCGGGAGAGAG
AGGTTGAGAGAGAGCTGGAGAGAGAGTGGGAGAAGGAACCTTGATTGGAG
AGAGACGGTGGTGGTGGTGGAGAGAGAGGGTGGTGGTGGTGGAGAGAGAC
GGTGGTGGTGGTGGAGAGAGAGAGGGAAGAAGTGCGCAGCACGCACGCAA
GCTCCATCGCACCAACCACGCCAAAAGGATCCCCGTGACTGCACCGGTGG
TACCCTACTACACACGAAATTCCCAACACGTATCCCCTGGGATCCTCACG
ACCAGATACTGCTGCGAGTATATCTAACATCCCCCCTGCTCGCAACAGTC
TCTCACTGAAAACTTCGCTAACACCCGATATCTCAACCAAAAGACGTCTT
TCCCAGACGATATGCCACCAAGACTTTACCAGAATAACATAAGAGAGAGA
AAAACAATTCAAAGGAATATGAATGCTGCATCGCGCGTAACAAATACTTG
GCGCGGGAAATGAAAGAAAACGGGAAACAAAACGAGAAGCAAAACAAAAC
CAAAACACAACCTATCAGAAAAACAACAAAATGTTCATGCCGAATTCATC
GCA back to topCoding sequence (CDS) from alignment at Scaffold_265:41020..42272+ >EsuBft5994_2a-0001 ID=EsuBft5994_2a-0001|Name=EsuBft5994_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=330bp|location=Sequence derived from alignment at Scaffold_265:41020..42272+ (Ectocarpus subulatus male Bft15b)
ATGTCAGCATCTTGTCTCAACCCGCGTGCAATCCCGCATACGCGGTGTAC
CTATGCCCTCGGTGCTCTTATCCAGGTCCTCCCGTTTACAGTTCGCAGCA
CACATCTACAACGCGTACACGGCCGAAATCCAGCCGTTGTTGATGCCCCG
CGGCTTCGGGCCGACGCTCTAAAGTTTTGGTACCCGGTCGGGCTGCGATT
TCAGGGCCCGGCGTACAACGGGGAGAGACGTGGAGCCGAGTTTCCAACCT
CTGGAGGGAGTCCGCCCTTGTGTGCTTCTCGAGATCGTCAACATCTGGGG
GCCACACCGACACCTGACACCCCCAGGTGA back to top
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