Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft555_9 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 80 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft555_9a-0001 ID=EsuBft555_9a-0001|Name=EsuBft555_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=800bp|location=Sequence derived from alignment at Scaffold_581:100195..101571- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TTCCTAGCCTTAGGAGTTTTCGCCCAAGCCCTTATTGATCACTCCCCATT
GCCAGTAGAAAAGCATTCCCGCTCGTCCCTGCTGTGTGCAGCTTCATCAC
GAGGTCAAGGTTCCCCGCAGCCGCGGCATACTTCAACGGAGTAAGAAGCC
ATTCCGCTCATTCCTCTACAGCTGACCCGGCGCAAACGAGGTCAAAGATG
GCACCCTCTGCCCCATTCAGGATGGTCCTGCCCTGCCCGGGCTGTACGCG
TGGTTCTTGGGTGGTCATGACCTGCGACATAGCACACAGAAGGTTGGAGT
TAGTTCTGGTTGAGATATCGTCAAATAAGGCCACCGCCGGTCGATTCCAC
GTCACTGGCACCGAAGGAGGGGCTACGCGGATAGCGCACCGCTTGCGGTG
TGTTCTTCCCATGGCACAGATAGGTGAGGGGGGGGAAGTGAACAGCGATG
AAGGGAGGGCTGGACACTCGGACCACAGGGGTGGCGGTGGTTCTAAGGGC
GGTGGGATGGATGAGTTGCCGACGGGAGGGGATGAGTCGGCGGCTAAAGT
GCTGTCAGTGAAAGGGGAAGCGGTGACGGAGAGACCTCGGCAGGAAGGGA
AATGAAGGTCGGGTGGAGACGTCGAAGTTGGAGACTCACGTCAGACAAGG
GAAGTGCTATCTAAGAGTGTACAGCAGACATTCGACGATGCACAACGGAC
AGAGGCTGAGGTCTCTGGGGGAAAGGGTGGAAGGCCTGGGGGCAAGTGGG
GTTATGAGGGTATTGCGCACGCTGGGGGGGGGAGTGTGTCGCGCAAGGGT back to topprotein sequence of EsuBft555_9a-0001 >EsuBft555_9 ID=EsuBft555_9|Name=EsuBft555_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=135bp
MAPSAPFRMVLPCPGCTRGSWVVMTCDIAHRRLELVLVEISSNKATAGRF
HVTGTEGGATRIAHRLRCVLPMAQIGEGGEVNSDEGRAGHSDHRGGGGSK
GGGMDELPTGGDESAAKVLSVKGEAVTERPRQEGK back to topmRNA from alignment at Scaffold_581:100195..101571- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft555_9a-0001 ID=EsuBft555_9a-0001|Name=EsuBft555_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1377bp|location=Sequence derived from alignment at Scaffold_581:100195..101571- (Ectocarpus subulatus male Bft15b)
TTCCTAGCCTTAGGAGTTTTCGCCCAAGCCCTTATTGATCACTCCCCATT
GCCAGTAGAAAAGCATTCCCGCTCGTCCCTGCTGTGTGCAGCTTCATCAC
GAGGTCAAGGTTCCCCGCAGCCGCGGCATACTTCAACGGAGTAAGAAGCC
ATTCCGCTCATTCCTCTACAGCTGACCCGGCGCAAACGAGGTCAAAGATG
GCACCCTCTGCCCCATTCAGGATGGTCCTGCCCTGCCCGGGCTGTACGCG
TGGTTCTTGGGTGGTCATGACCTGCGACATAGCACACAGAAGTGGAGCAC
CGATTCTGAGACCGGTTAAGAACCTCGTACATACCTGGATAGCGGCCTTG
TTGTAGCCCGTAAGAGGACAGACCTACAGTAAGGGCCTCACCCTCGGCCA
AACAAAACCTTTCCGCCATATCTGTGGCTGTAAAAACTTCTGATGTAGTG
ACGTGCAGTAAGTCAACCCTAGTTTAGGTCAGGGTAAGAAGACTTGGGGT
AGGTTGATCCCAGTATAAATGTCGAGGCGTGATGGAATGGACTTGAAAAT
GATGGCTCTGGGAGCAGGGTTGGAGTTAGTTCTGGTTGAGATATCGTCAA
ATAAGGTAATGAAAAGTGTATGAACTCAATACTAGAATTGACGAGGTGTG
GGTTTATGGTTGGAATGATGAGCTATTGAGGGAATTGCAGTTAGTTGAGA
GAAAGTGAGAGAGAGTTGGAGAGAAAGTGAACGGCGCAATTAGCTCGGGT
CAGCTAATGTCGCGTGCCCCCCTTTTTCAGTGTTCAATTTCCCTGCTGTT
CCCGGCCCACGAAGGCCTTAGAAACACACTTTGATCGCAAGCAACTTCGA
GACGCGCAAACCCACGACCCCACTGGCACATCTACATACAAAGCTACGTG
CGATAGGCCACCGCCGGTCGATTCCACGTCACTGGCACCGAAGGAGGGGC
TACGCGGATAGCGCACCGCTTGCGGTGTGTTCTTCCCATGGCACAGATAG
GTGAGGGGGGGGAAGTGAACAGCGATGAAGGGAGGGCTGGACACTCGGAC
CACAGGGGTGGCGGTGGTTCTAAGGGCGGTGGGATGGATGAGTTGCCGAC
GGGAGGGGATGAGTCGGCGGCTAAAGTGCTGTCAGTGAAAGGGGAAGCGG
TGACGGAGAGACCTCGGCAGGAAGGGAAATGAAGGTCGGGTGGAGACGTC
GAAGTTGGAGACTCACGTCAGACAAGGGAAGTGCTATCTAAGAGTGTACA
GCAGACATTCGACGATGCACAACGGACAGAGGCTGAGGTCTCTGGGGGAA
AGGGTGGAAGGCCTGGGGGCAAGTGGGGTTATGAGGGTATTGCGCACGCT
GGGGGGGGGAGTGTGTCGCGCAAGGGT back to topCoding sequence (CDS) from alignment at Scaffold_581:100195..101571- >EsuBft555_9a-0001 ID=EsuBft555_9a-0001|Name=EsuBft555_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=408bp|location=Sequence derived from alignment at Scaffold_581:100195..101571- (Ectocarpus subulatus male Bft15b)
ATGGCACCCTCTGCCCCATTCAGGATGGTCCTGCCCTGCCCGGGCTGTAC
GCGTGGTTCTTGGGTGGTCATGACCTGCGACATAGCACACAGAAGGTTGG
AGTTAGTTCTGGTTGAGATATCGTCAAATAAGGCCACCGCCGGTCGATTC
CACGTCACTGGCACCGAAGGAGGGGCTACGCGGATAGCGCACCGCTTGCG
GTGTGTTCTTCCCATGGCACAGATAGGTGAGGGGGGGGAAGTGAACAGCG
ATGAAGGGAGGGCTGGACACTCGGACCACAGGGGTGGCGGTGGTTCTAAG
GGCGGTGGGATGGATGAGTTGCCGACGGGAGGGGATGAGTCGGCGGCTAA
AGTGCTGTCAGTGAAAGGGGAAGCGGTGACGGAGAGACCTCGGCAGGAAG
GGAAATGA back to top
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