Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft555_7 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 146 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft555_7a-0001 ID=EsuBft555_7a-0001|Name=EsuBft555_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1461bp|location=Sequence derived from alignment at Scaffold_581:91124..94276- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTTGCTGCAGGTGAAGCGGCGGACTACCTGTCACCATATAATCGGTC
GGTCGGCGGGGATTTGACGATGGATCGACATCGGCATACGACTAGAGTGC
AAGTGTTCGCGGGGTCAAGAGCGGCCAAGATGATGTTGTGGGAGGCTCTG
TTGGATACGGGAAGTCCGGCATCGTTTGTACAAGAAAGGTAGCGTTCAGG
CGGTTGTGGCAGAGGGTGCCTCGGCACATTCGAGACGTCCATTTCGACTT
CAATGCCAAACTGTGGGAGCCGGAGGACATTGGCAAACTAGGGACGGGGA
AGAACACGTGCGCGACGTGGAGAGGTTTTTCGAGCGCATGGTCAAGTTCA
ACCTGAAACTGGCACCCAAGAAGACGAACCTGGGGGTGAAGGTGGTGACG
TTCTTGGGACATCAAGTCACGACGGAAGGGATCGGGCCAGGCCCGGACAA
GGTCAGACCGCTGCGTGAAGTGCCAATGCCCACTAATGTTAGCCAGTTGC
GATCGTTGTTGGGGTCCTTGTCGTGCTATTGAAGTTCCTGAAGAACATGT
CGGCGAAATTGAAACCGATCAATGCGACGCTGAAAAGGGGGGCGAAGTTT
GCGTTCACGGCTGATCATGTGGCAGTAGTGAGGAAGTTTANAGACGAACC
TGGGGGTGAAGGTGGTGACGTTCTTGGGACATCAAGTCACGACGGAAGGG
ATCGGGCCAGGCCCGGACAAGGTCAGACCGCTGCGTGAAGTGCCAATGCC
CACTAATGTTAGCCAGTTGCGATCGTTGTTGGGGTCCTTGTCGTGCTATT
GAAGTTCCTGAAGAACATGTCGGCGAAATTGAAACCGATCAATGCGACGC
TGAAAAGGGGGGCGAAGTTTGCGTTCACGGCTGATCATGTGGCAGTAGTG
AGGAAGTTTATGGATATTCTGTCTGGTCCTGAAGTTTTGGCATTTCCGTG
TTATGAGGGTGCGATCTCGGGAGAGCGGCCGTTTCGATTAACCGCTGATG
CGTCGATTTCGGGCTTGGGAGCCGTAATCGAGCAAGAGCAACGAGATGGA
AGTATTAGACCGCTATGCTTTTTGAGCAGATCAACATTCGCGAATGAAAC
GAGATGGAGTCCGACTGAGCTTGAAGCGGGCGCAATAGTGTGGGCGATAA
AGAAGAACCGGACACTATTTTATGGCATCCCCTTTGAAGTGTACAGTGAC
CATCAACCCTTGCGGAATTTGGGGAGTTTGGCAGAGAAAAATAATTGCGT
ACAGAGGTGGTATGACTTCCTGTCAGCGTACACATATGAACTTAAGTATC
GACCAGGGCGAGAGAATGCAAATGCCGATTTGATGTCACGGTTGCCATTG
CCTGCGACGAAAGAGGATGAGGCACCAGATGTCAGGCTAACTGATGCCGT
CTGATCTCGATCTTTATATGATAGGTGCGAGCGGGGTGCTACCTTCGCGA
TTGGGTCCGGT back to topprotein sequence of EsuBft555_7a-0001 >EsuBft555_7 ID=EsuBft555_7|Name=EsuBft555_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=63bp
MFAAGEAADYLSPYNRSVGGDLTMDRHRHTTRVQVFAGSRAAKMMLWEAL
LDTGSPASFVQER back to topmRNA from alignment at Scaffold_581:91124..94276- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft555_7a-0001 ID=EsuBft555_7a-0001|Name=EsuBft555_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3153bp|location=Sequence derived from alignment at Scaffold_581:91124..94276- (Ectocarpus subulatus male Bft15b)
ATGTTTGCTGCAGGTGAAGCGGCGGACTACCTGTCACCATATAATCGGTC
GGTCGGCGGGGATTTGACGATGGATCGACATCGGCATACGACTAGAGTGC
AAGTGTTCGCGGGGTCAAGAGCGGCCAAGATGATGTTGTGGGAGGCTCTG
TTGGATACGGGAAGTCCGGCATCGTTTGTACAAGAAAGGTGTGTGCAAAA
GATGTTGGCATGTGCTTAAGCTTCAACTGATAGCATTGAAACGGGGCTGA
ACAAGAAATGGGGTGGGTTCCATGGGGTGCCATTGGTTACAGATGGAACG
ATTCAATATTGAAATGTGGAAAGGCGGGAAATCAGCGCCGGTTCATTTCG
GTACACCGACGGTACGGACGAGTGTGTATGCGTAAATTGTGCCAGACTCG
GCCATGGGACATGATCTGATACTAGGGAGGGATAGCTGGGCTTATTTTCA
AGTTCGCAGCTTCCAAGACGTGTCAGACACAGAAACAATTGTCACCTTTG
TCGGTGCAAATACTGATAAGGTGGCAGGAGATCACCGCTTTGATAAATGG
GGCGGTAACGCGGTTGGTATTGTGGAAACGGAAGGTGATGGGAAGGTGGT
GGTGAAATCTGATGGTAGTAGACGATGGCTTCCAAATGCGATGTCATGGG
TGGAGGTAAAATTGACCAACCTAGATGGCAGTGACGCTGCGGTGGTGACG
TACCGTGTGCAGTTTGGGAAGAAGTGGTTCCCGCAGGAAGCGTTAGTCGA
AAATGGCACGTCTGAAATTCCTTTAAGAAGAGTGGGGGAAAGCTCGTGTC
TGGTGAAACCAAACGATATTTTGGGGTACGGTGGTGAACCCCTGGAGGTG
GTATATCTGGATGATGCTCGTTTGGTGGAAAATGAGGAATTCAAAAGTGT
ATTTGCGGTTCAGGAGGGTGGAGAGGCTGACATGCCTAACGACGAACCTC
CCGCTGATGTTATGTCTTTTTTGAATGGGGCGCCACAGGTAGCGTTCAGG
CGGTTGTGGCAGAGGGTGCCTCGGCACATTCGAGACGTCCATTTCGACTT
CAATGCCAAACTGTGGGAGCCGGAGGACATTGGCAAACTAGGTGATCTAT
TGTGCAAGTTTGAGCATCGTTTTTCGAAGGGTGGTTCGGATTTAGGGCGA
GTGACGGTGGATCCGTTTCGAATCATTTTGAAGTCGGGGGCACAGCCAGT
GCGGCAGAGGCCATATCGCTGTTCGCCGGTTATGAACGAAAAGGCGCAGA
TCGAAATCGACAAATTGCTGTTGAAGGGTGTGTTGCGGAGATCGTATAGC
AATTGGGCGAGTCCGCTGGTGGTAGTCGCGAAGGCTAACGGTGGCGTACG
GTTGACGGTCAACTACAAGCGCATCAATAAAATGAGTGTAATCCCGAAAT
TGCCCATTCCGATAGTGGAGGATATTTTGGCGGAATTGGACAAATCGAAA
ATCTTCAGTACGCTGGATTTGGTCAGAGGGTTTTACCAGTGCAGTATTGA
GGAGGAGAGCATTCCGATCACTGCTGTTATCACGTCTACGGGTATGCCGG
GGTGGACGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGTTGAACGAATTTTTATCCGTGACGCAAGGTCGCAGTAGTAGTCTT
GGGTGGTTCCATTCGGTGATGGCCAGAGAATGTAACGGACTGGAACGTGT
GCTGTTTATCGATGACGTGATCGTTTTTTCCAGGGACGGGGAAGAACACG
TGCGCGACGTGGAGAGGTTTTTCGAGCGCATGGTCAAGTTCAACCTGAAA
CTGGCACCCAAGAAGACGAACCTGGGGGTGAAGGTGGTGACGTTCTTGGG
ACATCAAGTCACGACGGAAGGGATCGGGCCAGGCCCGGACAAGGTCAGAC
CGCTGCGTGAAGTGCCAATGCCCACTAATGTTAGCCAGTTGCGATCGTTG
TTGGGGTCCTTGTCGTGCTATTGAAGTTCCTGAAGAACATGTCGGCGAAA
TTGAAACCGATCAATGCGACGCTGAAAAGGGGGGCGAAGTTTGCGTTCAC
GGCTGATCATGTGGCAGTAGTGAGGAAGTTTANAGACGAACCTGGGGGTG
AAGGTGGTGACGTTCTTGGGACATCAAGTCACGACGGAAGGGATCGGGCC
AGGCCCGGACAAGGTCAGACCGCTGCGTGAAGTGCCAATGCCCACTAATG
TTAGCCAGTTGCGATCGTTGTTGGGGTCCTTGTCGTGCTATTGAAGTTCC
TGAAGAACATGTCGGCGAAATTGAAACCGATCAATGCGACGCTGAAAAGG
GGGGCGAAGTTTGCGTTCACGGCTGATCATGTGGCAGTAGTGAGGAAGTT
TATGGATATTCTGTCTGGTCCTGAAGTTTTGGCATTTCCGTGTTATGAGG
GTGCGATCTCGGGAGAGCGGCCGTTTCGATTAACCGCTGATGCGTCGATT
TCGGGCTTGGGAGCCGTAATCGAGCAAGAGCAACGAGATGGAAGTATTAG
ACCGCTATGCTTTTTGAGCAGATCAACATTCGCGAATGAAACGAGATGGA
GTCCGACTGAGCTTGAAGCGGGCGCAATAGTGTGGGCGATAAAGAAGAAC
CGGACACTATTTTATGGCATCCCCTTTGAAGTGTACAGTGACCATCAACC
CTTGCGGAATTTGGGGAGTTTGGCAGAGAAAAATAATTGCGTACAGAGGT
GGTATGACTTCCTGTCAGCGTACACATATGAACTTAAGTATCGACCAGGG
CGAGAGAATGCAAATGCCGATTTGATGTCACGGTTGCCATTGCCTGCGAC
GAAAGAGGATGAGGCACCAGATGTCAGGCTAACTGATGCCGTCTGATCTC
GATCTTTATATGATAGGTGCGAGCGGGGTGCTACCTTCGCGATTGGGTCC
GGT back to topCoding sequence (CDS) from alignment at Scaffold_581:91124..94276- >EsuBft555_7a-0001 ID=EsuBft555_7a-0001|Name=EsuBft555_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=192bp|location=Sequence derived from alignment at Scaffold_581:91124..94276- (Ectocarpus subulatus male Bft15b)
ATGTTTGCTGCAGGTGAAGCGGCGGACTACCTGTCACCATATAATCGGTC
GGTCGGCGGGGATTTGACGATGGATCGACATCGGCATACGACTAGAGTGC
AAGTGTTCGCGGGGTCAAGAGCGGCCAAGATGATGTTGTGGGAGGCTCTG
TTGGATACGGGAAGTCCGGCATCGTTTGTACAAGAAAGGTAG back to top
|