Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7G0Q3 |
| ProteomeId | EsuBft555_4 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Max annot lvl | 2759|Eukaryota |
| Length | 88 |
| Hectar predicted targeting category | other localisation |
| Evalue | 2.31e-97 |
| EggNOG OGs | 2DCSR@1|root,2S5KN@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft555_4a-0001 ID=EsuBft555_4a-0001|Name=EsuBft555_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=889bp|location=Sequence derived from alignment at Scaffold_581:72859..74022+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTCCAACGGCGTGCGGCTGCGGCGCATGACACGGAAGGATGTCGGAGG
GAGTGTCCTGCCGTGGGAAGCAGCCGGACCTGGGCGTTGTTGGCACGTGG
AGTGCGATCATGCGACGGGGACGGCTTCGTTTGTCCTCCAGCGGAAGCAC
TTTCTCGATCTCGACTTGGATAGCGACGGCTTTATGGACTGCAAACCCAA
GGACACTCATGGGGCTCCCAAGCGCAGGCGATACGACTTCAGGTTCAAAG
CCCACGCAGTCAACCAGCTGCGCATCTTCCAGGACAACGCCGAAGACCTC
TGGAAGGAGGAGCAGCTCACGCCTCTTCAGTTCTTGGAGGATCGTCTCAA
GATTCCCTACAGCAATACAGTGAAGTGGGCCAAGAACGAGAAGGAATTTC
TTGCGGCGGCAGCCGATGACCTAAAGAAGAGCCTCCTCGCCAAACAGCAG
CCTAAGCGGGCGCCCGATGAGTCCGACGTGTCGGCAGTCACGACGGTCGC
GGAGAGAGAGTCCAGGGTTCCCAAATACGGTCAATTCCAGCTCTGGGAGC
GTTGGAATGTGGATCAAGTGTCTTTGGCATTCGTGAACGGGCTGCTCGAC
ACGTGGGACAAGAGAGGTGCGTTGCGGGTAGCAATCTCGCAGCTCTTTGC
TGGCCTAGAGAAAAGGCAGTGCAAGATGCAAGTCATCTTTGGTCCGGGTG
AGAAGACCATGCGCATTTCGGTGATTTCCGAGGCACGGGAAAGCGGATCT
CGCCGGTGGAGAAGGCAGCGCATCACGAGGACGTGGACGTGCTTTTCCAG
GAAAACGCGTGGGCCGACCAGAAGTTCTGCATGGAGTGGGCGAAGAGGTC
CTACCGCGAAGGCCTGATGCGCGGGCGGGGTGAGCTCCC back to topprotein sequence of EsuBft555_4a-0001 >EsuBft555_4 ID=EsuBft555_4|Name=EsuBft555_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=288bp
MSNGVRLRRMTRKDVGGSVLPWEAAGPGRCWHVECDHATGTASFVLQRKH
FLDLDLDSDGFMDCKPKDTHGAPKRRRYDFRFKAHAVNQLRIFQDNAEDL
WKEEQLTPLQFLEDRLKIPYSNTVKWAKNEKEFLAAAADDLKKSLLAKQQ
PKRAPDESDVSAVTTVAERESRVPKYGQFQLWERWNVDQVSLAFVNGLLD
TWDKRGALRVAISQLFAGLEKRQCKMQVIFGPGEKTMRISVISEARESGS
RRWRRQRITRTWTCFSRKTRGPTRSSAWSGRRGPTAKA back to topmRNA from alignment at Scaffold_581:72859..74022+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft555_4a-0001 ID=EsuBft555_4a-0001|Name=EsuBft555_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1164bp|location=Sequence derived from alignment at Scaffold_581:72859..74022+ (Ectocarpus subulatus male Bft15b)
ATGTCCAACGGCGTGCGGCTGCGGCGCATGACACGGAAGGATGTCGGAGG
GAGTGTCCTGCCGTGGGAAGCAGCCGGACCTGGGCGTTGTTGGCACGTGG
AGTGCGATCATGCGACGGGGACGGCTTCGTTTGTCCTCCAGCGGAAGCAC
TTTCTCGATCTCGACTTGGATAGCGACGGCTTTATGGACTGCAAACCCAA
GGACACTCATGGGGCTCCCAAGCGCAGGCGATACGACTTCAGGTTCAAAG
CCCACGCAGTCAACCAGCTGCGCATCTTCCAGGACAACGCCGAAGACCTC
TGGAAGGAGGAGCAGCTCACGCCTCTTCAGTTCTTGGAGGATCGTCTCAA
GATTCCCTACAGCAATACAGTGAAGTGGGCCAAGAACGAGAAGGAATTTC
TTGCGGCGGCAGCCGATGACCTAAAGAAGAGCCTCCTCGCCAAACAGCAG
CCTAAGCGGTGATTTCCTGAGGCAGAGAAGCGACTGTACAAGGGGTTCGT
GGAGCGGCGGAAGAGAAAGCTGAAGGTGTCGACCCTGTGGCTGACGATCA
AGTTCCGGAAGCTCGTGCGAGAGATGTACCCCGGGGATCAAAGAGCGGCG
TCCTTCCGCGCATCCTTCAGGTGGGCGCGAAAATGGGCCAAGAGGCATAA
CCTGTCCAAAAGACGCCGGCTTCCAAAGATCCGCGCTTCCACCGGCTGTT
TCGCAAGCTCCTGCAAGAGCCGGTGCGGTGCAGGGCGCCCGATGAGTCCG
ACGTGTCGGCAGTCACGACGGTCGCGGAGAGAGAGTCCAGGGTTCCCAAA
TACGGTCAATTCCAGCTCTGGGAGCGTTGGAATGTGGATCAAGTGTCTTT
GGCATTCGTGAACGGGCTGCTCGACACGTGGGACAAGAGAGGTGCGTTGC
GGGTAGCAATCTCGCAGCTCTTTGCTGGCCTAGAGAAAAGGCAGTGCAAG
ATGCAAGTCATCTTTGGTCCGGGTGAGAAGACCATGCGCATTTCGGTGAT
TTCCGAGGCACGGGAAAGCGGATCTCGCCGGTGGAGAAGGCAGCGCATCA
CGAGGACGTGGACGTGCTTTTCCAGGAAAACGCGTGGGCCGACCAGAAGT
TCTGCATGGAGTGGGCGAAGAGGTCCTACCGCGAAGGCCTGATGCGCGGG
CGGGGTGAGCTCCC back to topCoding sequence (CDS) from alignment at Scaffold_581:72859..74022+ >EsuBft555_4a-0001 ID=EsuBft555_4a-0001|Name=EsuBft555_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=867bp|location=Sequence derived from alignment at Scaffold_581:72859..74022+ (Ectocarpus subulatus male Bft15b)
ATGTCCAACGGCGTGCGGCTGCGGCGCATGACACGGAAGGATGTCGGAGG
GAGTGTCCTGCCGTGGGAAGCAGCCGGACCTGGGCGTTGTTGGCACGTGG
AGTGCGATCATGCGACGGGGACGGCTTCGTTTGTCCTCCAGCGGAAGCAC
TTTCTCGATCTCGACTTGGATAGCGACGGCTTTATGGACTGCAAACCCAA
GGACACTCATGGGGCTCCCAAGCGCAGGCGATACGACTTCAGGTTCAAAG
CCCACGCAGTCAACCAGCTGCGCATCTTCCAGGACAACGCCGAAGACCTC
TGGAAGGAGGAGCAGCTCACGCCTCTTCAGTTCTTGGAGGATCGTCTCAA
GATTCCCTACAGCAATACAGTGAAGTGGGCCAAGAACGAGAAGGAATTTC
TTGCGGCGGCAGCCGATGACCTAAAGAAGAGCCTCCTCGCCAAACAGCAG
CCTAAGCGGGCGCCCGATGAGTCCGACGTGTCGGCAGTCACGACGGTCGC
GGAGAGAGAGTCCAGGGTTCCCAAATACGGTCAATTCCAGCTCTGGGAGC
GTTGGAATGTGGATCAAGTGTCTTTGGCATTCGTGAACGGGCTGCTCGAC
ACGTGGGACAAGAGAGGTGCGTTGCGGGTAGCAATCTCGCAGCTCTTTGC
TGGCCTAGAGAAAAGGCAGTGCAAGATGCAAGTCATCTTTGGTCCGGGTG
AGAAGACCATGCGCATTTCGGTGATTTCCGAGGCACGGGAAAGCGGATCT
CGCCGGTGGAGAAGGCAGCGCATCACGAGGACGTGGACGTGCTTTTCCAG
GAAAACGCGTGGGCCGACCAGAAGTTCTGCATGGAGTGGGCGAAGAGGTC
CTACCGCGAAGGCCTGA back to top
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