Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft555_14 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 4 |
| Length | 183 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft555_14a-0001 ID=EsuBft555_14a-0001|Name=EsuBft555_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1830bp|location=Sequence derived from alignment at Scaffold_581:129583..131671+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCGGTTTCCGGACGACGAAGGTTTCACGCACCTCCGCGCGGACCGGTT
AGGGCGAGCTGTAATCTTCGTAGCCGCGTTGAGACAAGGAGAGAAACCCC
TGCCTCTAGCTCTCGTGCGAGACTTTAGTCCTAGCAAGGACTGCCTCTGC
CAGCGCCCAGACTGCTTCCTAGCTATTTTCGCCAAGAAAGAAAGGAAGGC
AGAGTTTCGCCAATGCAGTAAATGCAAGTACCGGAAATCGGACAGGAGCC
GCGTAAGGTGGTATCCCATGGATGCTGCAGGAGATCATGTCGCGGAGGGT
ACTGCGATAGTGAGTGATGGTGATTGGTGGTGCGGCTGTTGCTACCACAG
TCGGTTGAACGGCATGAAGAGAGACGACAAACCGACAGAGCAACCAGCGA
ACAGGTCATGTGGATCGGAGGACGAGGCACCGACGCTTGTAGAGCCTTTG
AGCACGGTGCGCAGGATGGTGGATGACGTCCTCGGTCGAGGTGAGATCCT
TTGCTGGCAGGACGTCGCCGGTTGGCTAGCTGCTGAACGCGCGAAGGTTG
GCATGGAGGAGATAACGAGGAAGTACGCACGACAACTCGTCCTGAACTTG
TTTACCGGGATGGACGCAGACCCCGGGAGCAAATCACGATTGGTCCGAGC
CGACGGAGCCCAAGGAGACGCACGCGAGCGGGAACTCTTCCTCGTCCCAA
ACACCCTTGGGGACAAGCATCTCGTTGACTTGATGCTGCGTGCTCGACGT
AGTGCACCCGCACAGCCACCATCCAACCAGCTAGCTGATAAGGGTGGGTC
TCTCGAGTCGATTCTGAAGGAAGTCGAGAAGGACACGGAGGACGCAGACG
CACGGATGTCCGTCGTGCGGGCAGCTGGTAGAATTGTTCGAGCCGACGTG
GAGAGTGACCCTGCCCTGAAGAACACCACCGGCACACGCGAGAAGTATCG
CTACGCCGATGAGTTGGACATGAAAGTGAAGCCACCCAGAGAGACTCTAC
TATCCACGTTTCCGCCGTCCTTGGTTGGGTTGTACCAAAGCATGACGGAC
ATGGCACTGTATCGCGAGATCATCGCATCAGAGACCGAACATCCTGGAGA
GCCCTGGGTATGGCAGACCGAAGGGCGAGACGGACGGCATCCTACCACCT
CGGGCGACTTAGAGGGCGAGAACGGTGATGGAGAAAAGAAGAACGAGGCC
AGGCATATCAACAGCCTCAACCGTGACAGGCGATCCACGCATCGTAGGCT
TCTGGTGATGTGTACGGTCGTGGTGACGGCAATTTTGCGTGGTAGGTACA
TGGGTTCGCACGACATCAAAGGGGCTCAGTGGGCAAAGTCTAAGGGTACG
TGTCGCGAGGTGACCAACTTTGTAGCGGAGCACGGTTTGTGGGCGACGAC
GTCGCAAATTCAGCACCGAGAAGATTACCACGCGAGGTTCGTAGAGGACA
AGGACCTTCTGAGCCAAGACGCCGAGTGCGCCGCCATTCCCCTGGACAAC
TGTGATTTTGACCCAAGGGTCGGAGTTGGCCAGGGGGAGGGGCCTCATCT
TCCCTTCATCGCTGCGACGGCTTTAACGGTAGGGCCCGACGTAGGTCGAA
TGGACGACTGGTGGTTGGTAAAGGGTCGGGGATCTCTTACGGTAGAGGAC
GTCCTTATGGGGCCGGAGCGGGACCGGGGGGACGGAGCGCGGCGTTATAA
CGAGTTTTCGGCCGACCTCTACCGCGGCGTATTCGCTGAGGCACGGAACA
ACTCCGACAGGGCTGCGGCAGACACATGCTTCGAGTGTGAACTCCGCAAG
TCGCGCCCTCCACACTGTTCCTGTGGATGA back to topprotein sequence of EsuBft555_14a-0001 >EsuBft555_14 ID=EsuBft555_14|Name=EsuBft555_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=609bp
MRFPDDEGFTHLRADRLGRAVIFVAALRQGEKPLPLALVRDFSPSKDCLC
QRPDCFLAIFAKKERKAEFRQCSKCKYRKSDRSRVRWYPMDAAGDHVAEG
TAIVSDGDWWCGCCYHSRLNGMKRDDKPTEQPANRSCGSEDEAPTLVEPL
STVRRMVDDVLGRGEILCWQDVAGWLAAERAKVGMEEITRKYARQLVLNL
FTGMDADPGSKSRLVRADGAQGDARERELFLVPNTLGDKHLVDLMLRARR
SAPAQPPSNQLADKGGSLESILKEVEKDTEDADARMSVVRAAGRIVRADV
ESDPALKNTTGTREKYRYADELDMKVKPPRETLLSTFPPSLVGLYQSMTD
MALYREIIASETEHPGEPWVWQTEGRDGRHPTTSGDLEGENGDGEKKNEA
RHINSLNRDRRSTHRRLLVMCTVVVTAILRGRYMGSHDIKGAQWAKSKGT
CREVTNFVAEHGLWATTSQIQHREDYHARFVEDKDLLSQDAECAAIPLDN
CDFDPRVGVGQGEGPHLPFIAATALTVGPDVGRMDDWWLVKGRGSLTVED
VLMGPERDRGDGARRYNEFSADLYRGVFAEARNNSDRAAADTCFECELRK
SRPPHCSCG back to topmRNA from alignment at Scaffold_581:129583..131671+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft555_14a-0001 ID=EsuBft555_14a-0001|Name=EsuBft555_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2089bp|location=Sequence derived from alignment at Scaffold_581:129583..131671+ (Ectocarpus subulatus male Bft15b)
ATGCGGTTGGGTTACACACTACCCTGGCACCGAGTGTAGCACATGCCCCG
GGAGTGTAGTGCACTCGGCCGACGAGAGACTATGTTCGGCATGCCACAGG
TTTCCGGACGACGAAGGTTTCACGCACCTCCGCGCGGACCGGTTAGGGCG
AGCTGTAATCTTCGTAGCCGCGTTGAGACAAGGAGAGAAACCCCTGCCTC
TAGCTCTCGTGCGAGACTTTAGTCCTAGCAAGGACTGCCTCTGCCAGCGC
CCAGACTGCTTCCTAGCTATTTTCGCCAAGAAAGAAAGGAAGGCAGAGTT
TCGCCAATGCAGTAAATGCAAGTACCGGAAATCGGACAGGAGCCGCGTAA
GGTGGTATCCCATGGATGCTGCAGGAGATCATGTCGCGGAGGGTACTGCG
ATAGTGAGTGATGGTGATTGGTGGTGCGGCTGTTGCTACCACAGTCGGTT
GAACGGCATGAAGAGAGACGACAAACCGACAGAGCAACCAGCGAACAGGT
CATGTGGATCGGAGGACGAGGCACCGACGCTTGTAGAGCCTTTGAGCACG
GTGCGCAGGATGGTGGATGACGTCCTCGGTCGAGGTGAGATCCTTTGCTG
GCAGGACGTCGCCGGTTGGCTAGCTGCTGAACGCGCGAAGGTTGGCATGG
AGGAGATAACGAGGAAGTACGCACGACAACTCGTCCTGAACTTGTTTACC
GGGATGGACGCAGACCCCGGGAGCAAATCACGATTGGTCCGAGCCGACGG
AGCCCAAGGAGACGCACGCGAGCGGGAACTCTTCCTCGTCCCAAACACCC
TTGGGGACAAGCATCTCGTTGACTTGATGCTGCGTGCTCGACGTAGTGCA
CCCGCACAGCCACCATCCAACCAGCTAGCTGATAAGGGTGGGTCTCTCGA
GTCGATTCTGAAGGAAGTCGAGAAGGACACGGAGGACGCAGACGCACGGA
TGTCCGTCGTGCGGGCAGCTGGTAGAATTGTTCGAGCCGACGTGGAGAGT
GACCCTGCCCTGAAGAACACCACCGGCACACGCGAGAAGTATCGCTACGC
CGATGAGTTGGACATGAAAGTGAAGCCACCCAGAGAGACTCTACTATCCA
CGTTTCCGCCGTCCTTGGTTGGGTTGTACCAAAGCATGACGGACATGGCA
CTGTATCGCGAGATCATCGCATCAGAGACCGAACATCCTGGAGAGCCCTG
GGTATGGCAGACCGAAGGGCGAGACGGACGGCATCCTACCACCTCGGGCG
ACTTAGAGGGCGAGAACGGTGATGGAGAAAAGAAGAACGAGGTCAGTCAA
CCAGCAGTGACGGTGTCGTTAGGGCCACGAACCGAGGAACAGGCCAGGCA
TATCAACAGCCTCAACCGTGACAGGCGATCCACGCATCGTAGGCTTCTGG
TGATGTGTACGGTCGTGGTGACGGCAATTTTGCGTGGTAGGTACATGGGT
TCGCACGACATCAAAGGGGCTCAGTGGGCAAAGTCTAAGGGTACGTGTCG
CGAGGTGACCAACTTTGTAGCGGAGCACGGTTTGTGGGCGACGACGTCGC
AAATTCAGCACCGAGAAGATTACCACGCGAGGTTCGTAGAGGACAAGGAC
CTTCTGAGCCAAGACGCCGAGTGCGCCGCCATTCCCCTGGACAACTGTGA
TTTTGACCCAAGGGTCGGAGTTGGCCAGGGGGAGGGGCCTCATCTTCCCT
TCATCGCTGCGACGGCTTTAACGGTAGGGCCCGACGTAGGTCGAATGGAC
GACTGGTGGTTGGTAAAGGGTCGGGGATCTCTTACGGTAGAGGACGTCCT
TATGGGGCCGGAGCGGGACCGGGGGGACGGAGCGCGGCGTTATAACGAGT
TTTCGGCCGACCTCTACCGCGGCGTATTCGCTGAGGCACGGAACAACTCC
GACAGGGCTGCGGCAGACACATGCTTCGAGTGTGAACTCCGCAAGGTAAG
ACACCATTCTTTGTACTTTCTCCCTCCTTGCTTTCTGGTTTTTCCACGAT
CTATCCCATCTGACTGGACATATACTACCCAATTATATATGGCGTTCGAC
GAGTCTAAGTCGCGCCCTCCACACTGTTCCTGTGGATGA back to topCoding sequence (CDS) from alignment at Scaffold_581:129583..131671+ >EsuBft555_14a-0001 ID=EsuBft555_14a-0001|Name=EsuBft555_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1830bp|location=Sequence derived from alignment at Scaffold_581:129583..131671+ (Ectocarpus subulatus male Bft15b)
ATGCGGTTTCCGGACGACGAAGGTTTCACGCACCTCCGCGCGGACCGGTT
AGGGCGAGCTGTAATCTTCGTAGCCGCGTTGAGACAAGGAGAGAAACCCC
TGCCTCTAGCTCTCGTGCGAGACTTTAGTCCTAGCAAGGACTGCCTCTGC
CAGCGCCCAGACTGCTTCCTAGCTATTTTCGCCAAGAAAGAAAGGAAGGC
AGAGTTTCGCCAATGCAGTAAATGCAAGTACCGGAAATCGGACAGGAGCC
GCGTAAGGTGGTATCCCATGGATGCTGCAGGAGATCATGTCGCGGAGGGT
ACTGCGATAGTGAGTGATGGTGATTGGTGGTGCGGCTGTTGCTACCACAG
TCGGTTGAACGGCATGAAGAGAGACGACAAACCGACAGAGCAACCAGCGA
ACAGGTCATGTGGATCGGAGGACGAGGCACCGACGCTTGTAGAGCCTTTG
AGCACGGTGCGCAGGATGGTGGATGACGTCCTCGGTCGAGGTGAGATCCT
TTGCTGGCAGGACGTCGCCGGTTGGCTAGCTGCTGAACGCGCGAAGGTTG
GCATGGAGGAGATAACGAGGAAGTACGCACGACAACTCGTCCTGAACTTG
TTTACCGGGATGGACGCAGACCCCGGGAGCAAATCACGATTGGTCCGAGC
CGACGGAGCCCAAGGAGACGCACGCGAGCGGGAACTCTTCCTCGTCCCAA
ACACCCTTGGGGACAAGCATCTCGTTGACTTGATGCTGCGTGCTCGACGT
AGTGCACCCGCACAGCCACCATCCAACCAGCTAGCTGATAAGGGTGGGTC
TCTCGAGTCGATTCTGAAGGAAGTCGAGAAGGACACGGAGGACGCAGACG
CACGGATGTCCGTCGTGCGGGCAGCTGGTAGAATTGTTCGAGCCGACGTG
GAGAGTGACCCTGCCCTGAAGAACACCACCGGCACACGCGAGAAGTATCG
CTACGCCGATGAGTTGGACATGAAAGTGAAGCCACCCAGAGAGACTCTAC
TATCCACGTTTCCGCCGTCCTTGGTTGGGTTGTACCAAAGCATGACGGAC
ATGGCACTGTATCGCGAGATCATCGCATCAGAGACCGAACATCCTGGAGA
GCCCTGGGTATGGCAGACCGAAGGGCGAGACGGACGGCATCCTACCACCT
CGGGCGACTTAGAGGGCGAGAACGGTGATGGAGAAAAGAAGAACGAGGCC
AGGCATATCAACAGCCTCAACCGTGACAGGCGATCCACGCATCGTAGGCT
TCTGGTGATGTGTACGGTCGTGGTGACGGCAATTTTGCGTGGTAGGTACA
TGGGTTCGCACGACATCAAAGGGGCTCAGTGGGCAAAGTCTAAGGGTACG
TGTCGCGAGGTGACCAACTTTGTAGCGGAGCACGGTTTGTGGGCGACGAC
GTCGCAAATTCAGCACCGAGAAGATTACCACGCGAGGTTCGTAGAGGACA
AGGACCTTCTGAGCCAAGACGCCGAGTGCGCCGCCATTCCCCTGGACAAC
TGTGATTTTGACCCAAGGGTCGGAGTTGGCCAGGGGGAGGGGCCTCATCT
TCCCTTCATCGCTGCGACGGCTTTAACGGTAGGGCCCGACGTAGGTCGAA
TGGACGACTGGTGGTTGGTAAAGGGTCGGGGATCTCTTACGGTAGAGGAC
GTCCTTATGGGGCCGGAGCGGGACCGGGGGGACGGAGCGCGGCGTTATAA
CGAGTTTTCGGCCGACCTCTACCGCGGCGTATTCGCTGAGGCACGGAACA
ACTCCGACAGGGCTGCGGCAGACACATGCTTCGAGTGTGAACTCCGCAAG
TCGCGCCCTCCACACTGTTCCTGTGGATGA back to top
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