EsuBft525_22a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft525_22a-0001
Unique NameEsuBft525_22a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_129contigScaffold_129:800387..805049 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
ProteomeIdEsuBft525_22
Ownerapollo_admin@sb-roscoff.fr
Nb exon6
Length189
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-04_004740.3
Date last modified2016-06-14
Date creation2016-06-14
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft525_22aEsuBft525_22aEctocarpus subulatus male Bft15bgeneScaffold_129 800387..805049 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft525_22a-0001EsuBft525_22Ectocarpus subulatus male Bft15bpolypeptideScaffold_129 800387..805049 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft525_22a-0001-exonagat-exon-70717Ectocarpus subulatus male Bft15bexonScaffold_129 800387..800521 -
EsuBft525_22a-0001-exonEsuBft525_22a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_129 800927..801008 -
EsuBft525_22a-0001-exonagat-exon-70719Ectocarpus subulatus male Bft15bexonScaffold_129 801597..801920 -
EsuBft525_22a-0001-exonagat-exon-70720Ectocarpus subulatus male Bft15bexonScaffold_129 802050..802412 -
EsuBft525_22a-0001-exonagat-exon-70718Ectocarpus subulatus male Bft15bexonScaffold_129 803916..804151 -
EsuBft525_22a-0001-exonagat-exon-70721Ectocarpus subulatus male Bft15bexonScaffold_129 804297..805049 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft525_22a-0001-cdsEsuBft525_22a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_129 800387..800521 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft525_22a-0001 ID=EsuBft525_22a-0001|Name=EsuBft525_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1893bp|location=Sequence derived from alignment at Scaffold_129:800387..805049- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTAGCCACCTCGGTGGCACCCGAAAGGGCGCAAGAGGTTGCGTCGGC
GGCAGTGTCAGAAACAGTGTCAGCTATGTTCGACAGCGCGACCACGATGG
CAGTAGCCGCCGTCGAGAGACCCGTGCAGCAGGTGCTGGCCCCAGCGACA
GCTTCGACATCCTCGGGTCACGAAACAGCCGTCGTCCCGCCACTGCTCTC
TGACGCTCCCGAATTGTCGAAGGACCGTGCCATCAGCATTATCGAGCTGT
CCGGACGTGATCGCGAGGATGAAGAGAGTTTTGGGGGTGAAGAAGGGACG
GCGTTGAAGCCTCCGGCAGAGGCTCTGCTCTCTCCTCCCCCCCAGCACGT
GAGAAACGAGAGCGATACTCCTGTAAAGGCGCCTAATAGGAGCAGGACTA
GCCGGGGAGATGACGACGATGCGTTGGTGATCCCCGACGTAGATCGTCCC
ATTAATGACGAGGTCAACAAATGTGATGACGCGGAGGGAGCCCACCCGGA
GAAGTACGAACGCAAAGGCATGCGCGATAAACAAGGAGGTGGCGCGCGCC
AGGAAGACACGCAAGAACGGGTCGGCAACGGGAAAGCGCAAGACGACAGC
ACAGAGAGACAGGGAGGACGAGAGAACAAGGTAGACTTCGGGGAGGAAGT
CGGGTCGTCAAAGGATGGCGATGGCCAAATGTTGCATCATTCCGGGCCCG
AAGACGGACCAACTGTCTTAGTGTCGGGAGTGAGAAAGGGTGCGGTCGTA
CAGGTTGTCGAAAGGTTGCATCCGTCGTACCAGCTGATCGTCTCGGTGAG
GCTGGCTGCGAGCGCTCTGTCGTGGGTGGAGCGGAATGGCACGCTTGATG
AAAGCAAGAGCAGCCACCGTCAAAGAGGTAGAACTGCAACCTCCGAGGAA
GGAGGCAACCCGGTGAACGAGTACGGCAAAGCTACCGTAGCAGCAAGTCT
GTCCCTCGGAAAGTCGGAGATAATGGGAGCTATTGAGAGGCCCGCCACCG
CCGCCTTACCAAAAAAGACCCCGCCGCCTCACTACTCAGAGGCTATGAAA
TTCTACGCCGCAACGCAGCGCTCATCACCGACACCGAAGACCGGTCCTGC
GCAGCACCACCATCAAAGAACGCCATCCTCTCGAGAGGCGGCAACAAGAC
ATGTGCCGTCAGGCTCTGTCATATCGAGTGGCGACGCCTCCTCGTTCTCT
TCCGACGGGGACGCTAGCCTTGGGCCTCCTCCGAGCTACCACTCCACAGC
GTCGGGTGGAGGGACAGCCCGCTCCTCCTCGGCGTCCGCGGAGGGAATGG
AGGATGAGAAAGACCGCCTCGCAAGGGACCTACCGCCTCCTTCGTACGGG
AGCCCAGACGCACAACCCGAGAAACAGCTGGGAACGCACCGAAGGCCCAG
TTCTTCAGACGGCGGTGGCGGCGGTAGCGGTAGCAGTAGACTGTGGGCGT
CCGGCGGTGGGACTATCGAGAGATTGGGGACTGACGACGGTGACCGGGGA
TCGGTAAGAGGAGGAGCAGGAGCGTCCAGGGGGCGGCGACCTCCGCACGA
GGGGAGGGGAGGGTGGACGAGAAGCCCGACAGCCTCGGGTGGTACCAGGC
CAATGACAACCATGGCCGTCTCGCGAGGGAAGAGTAGGCATGGAACCAAG
GATGCCACCACCGGCTTGCCATTGAGGGAGGGCCGACGGAGGGCAGAAGC
AGCTGCGAACGCTGCCGAACGAAGGGCATGGAAAACCGCCGACGTCAGCA
CCACCAACCGGGTGCTGGATCTCATGCTGGTGACGGAGAGGGTTCGCCAG
GAAGAGCAGAAGCGACGCGTCGCTGAGGCCAGCGCAAACAACCAGGTGCA
GTGGGGGGGAAGAGGACGGGAGGGCTGCGCGAGGGCGAAATGA
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protein sequence of EsuBft525_22a-0001

>EsuBft525_22 ID=EsuBft525_22|Name=EsuBft525_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=630bp
MVATSVAPERAQEVASAAVSETVSAMFDSATTMAVAAVERPVQQVLAPAT
ASTSSGHETAVVPPLLSDAPELSKDRAISIIELSGRDREDEESFGGEEGT
ALKPPAEALLSPPPQHVRNESDTPVKAPNRSRTSRGDDDDALVIPDVDRP
INDEVNKCDDAEGAHPEKYERKGMRDKQGGGARQEDTQERVGNGKAQDDS
TERQGGRENKVDFGEEVGSSKDGDGQMLHHSGPEDGPTVLVSGVRKGAVV
QVVERLHPSYQLIVSVRLAASALSWVERNGTLDESKSSHRQRGRTATSEE
GGNPVNEYGKATVAASLSLGKSEIMGAIERPATAALPKKTPPPHYSEAMK
FYAATQRSSPTPKTGPAQHHHQRTPSSREAATRHVPSGSVISSGDASSFS
SDGDASLGPPPSYHSTASGGGTARSSSASAEGMEDEKDRLARDLPPPSYG
SPDAQPEKQLGTHRRPSSSDGGGGGSGSSRLWASGGGTIERLGTDDGDRG
SVRGGAGASRGRRPPHEGRGGWTRSPTASGGTRPMTTMAVSRGKSRHGTK
DATTGLPLREGRRRAEAAANAAERRAWKTADVSTTNRVLDLMLVTERVRQ
EEQKRRVAEASANNQVQWGGRGREGCARAK
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mRNA from alignment at Scaffold_129:800387..805049-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft525_22a-0001 ID=EsuBft525_22a-0001|Name=EsuBft525_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4663bp|location=Sequence derived from alignment at Scaffold_129:800387..805049- (Ectocarpus subulatus male Bft15b)
ATGGTAGCCACCTCGGTGGCACCCGAAAGGGCGCAAGAGGTTGCGTCGGC GGCAGTGTCAGAAACAGTGTCAGCTATGTTCGACAGCGCGACCACGATGG CAGTAGCCGCCGTCGAGAGACCCGTGCAGCAGGTGCTGGCCCCAGCGACA GCTTCGACATCCTCGGGTCACGAAACAGCCGTCGTCCCGCCACTGCTCTC TGACGCTCCCGAATTGTCGAAGGACCGTGCCATCAGCATTATCGAGCTGT CCGGACGTGATCGCGAGGATGAAGAGAGTTTTGGGGGTGAAGAAGGGACG GCGTTGAAGCCTCCGGCAGAGGCTCTGCTCTCTCCTCCCCCCCAGCACGT GAGAAACGAGAGCGATACTCCTGTAAAGGCGCCTAATAGGAGCAGGACTA GCCGGGGAGATGACGACGATGCGTTGGTGATCCCCGACGTAGATCGTCCC ATTAATGACGAGGTCAACAAATGTGATGACGCGGAGGGAGCCCACCCGGA GAAGTACGAACGCAAAGGCATGCGCGATAAACAAGGAGGTGGCGCGCGCC AGGAAGACACGCAAGAACGGGTCGGCAACGGGAAAGCGCAAGACGACAGC ACAGAGAGACAGGGAGGACGAGAGAACAAGGTAGACTTCGGGGAGGAAGT CGGGTCGTCAAAGGATGGCGATGGCCAAATGTTGCATCATTCCGGGCCCG AAGACGGACCAACTGTCTTAGTGTCGGGAGTGAGAAAGGGTGCGGTCGTA CAGGTGAAGTAAACAGTCGTACGGTGGACAGGTATAGACACAAGACTCGT AGGAAGGTGGTCCCGTTTCAAGTAGCTCCAGGAGCTCCCTTTTCCGGTTC GACCTGTAGACCTTAACCCTACCCCTTTTCATCCCACCGGGTTGGCAGGT TGTCGAAAGGTTGCATCCGTCGTACCAGCTGATCGTCTCGGTGAGGCTGG CTGCGAGCGCTCTGTCGTGGGTGGAGCGGAATGGCACGCTTGATGAAAGC AAGAGCAGCCACCGTCAAAGAGGTAGAACTGCAACCTCCGAGGAAGGAGG CAACCCGGTGAACGAGTACGGCAAAGCTACCGTAGCAGCAAGTCTGTCCC TCGGAAAGTCGGAGATAATGGGAGCTATTGAGAGGTATGGACATGGCGTC TGTACCGCAGGACAGATGGGCCCCGCAATAAAAGGCTCACGCTTACCCAA AAACAAGCATTTTCCGTTAAGGACACACCTCGGCGTGTGGGCCCTGCAAT GTTCCTACATTGTATCCTATGCTACATGGCACCATATGTAAACACACCAA TAAACCTCGGCCCTACGTAAATTGATATGTATTTTCACTTCAGGCCCATC TGTATGTTCTACTGCTCGACGATAATAGGGAAAAGAAGAGACAGCCGTCA GCAAGAAAGGGAAATCAATCAGGGCTTGGCTCGTAATCCATCCGCACGAC GCTTGACATTCGGGAAATATTTTTTTGTCATCGAGCCGTTGGAATCTCCC TCGTATTCTACACCAATGTCGAAGAAGGCAGCGTACTAATTCGGATACGC AGAATCAGTGGACAGCACAATTAACATCCGATCACATAGGTGCACGAATA TATGTATGCGAGTACTCGTCCAGGCATTTGCTGGTAACTTTGGAAACGTT CGTATTCGAACGTTCGCGTACACCAGGCTACCTGTCGCCGCGTTCTCTTT GCATAGGTGCCCCTGGGTATTACGACACGCCCTTGAAGGAGCACCGACAG TAGTACTATTGCGATGGAAATGGAGCCCCTATCGACACAAATGTAATTTG ACTGAGTGTTACAACCGGCCCTCGCTCTCTTGTGTTTTTTGGGGGGTCGG GGGTTCAGCTGGGTCCATTCATCCGTGTTTCCCGCCGACGGGGGTGGCAG CGCGTCCCAACATTCATCGGGAGCGACAGGCAAGGAAGCAACGAGTTCCA CAATAGTTACTGCCAGCACTGTGGCTGTGACATCCTCTACGGCAGCAGCC GTAGCGGCAGCAGATGCAGCAGCAGGTGCTGATGCAGGCTTGCGTAGGTG GATAACCACCGGGCGTCCACCACGACGCGAACATCTGGTGCTCTGGCTGC TGCGGAGGCTCGAGATCGTCGAGGTAGCGGTCGAGTGAGGGAAGCCAGAC GTTGCAAACGAGGATGGGCAGCTAGGCGATGATCGGGAGAGCGGAAAGAG GTGGGTGCTTAAGATATCGAACCGTGAAATCAACACGAGCGAAAAGGGTG TTGGAAACGGTGCCGGCGACGACGAAGACAACGACCACGATGGTACCAAG GGTGCGTCTGTGAGACGCACTGCCAGGCGTGGCAGCAGCCGATCTGGCGG CGGTGACAGGAGGGGGTCGGGTCAACAGTATGGCGGACGGGCAGACGCGA AGGAAGGAAAAGACGAGGACTCTTCGCCATCGAACGCGGCGGTTCGTGCT GTTGTCGACGGGACAGCAGCGCCACCGATCGCCGCCTGGGAATCTGCGGC GATGGCGGGGGGAGGAGGGAATGAGGAGCCACTCTGGCATTGGTGGGACG ATGCAGACCCGTGGTCGAGAGACCCCAGATCGCACATGACAGTAGCAAGC ACACCCACCGACGGTGGACCGTCAAGATCAGGGTCAGGCCCGCCACCGCC GCCTTACCAAAAAAGACCCCGCCGCCTCACTACTCAGAGGCTATGAAATT CTACGCCGCAACGCAGCGCTCATCACCGACACCGAAGACCGGTCCTGCGC AGCACCACCATCAAAGAACGCCATCCTCTCGAGAGGCGGCAACAAGACAT GTGCCGTCAGGCTCTGTCATATCGAGTGGCGACGCCTCCTCGTTCTCTTC CGACGGGGACGCTAGCCTTGGGCCTCCTCCGAGCTACCACTCCACAGCGT CGGGTGGAGGGACAGCCCGCTCCTCCTCGGCGTCCGCGGAGGGAATGGAG GATGAGAAAGACCGCCTCGCAAGGGACCTACCGCCTCCTTCGTACGGGAG GTTCTAAGACGCTCTGTCCAGCACAGCTGCTGGACTTTCGCGCCCTGAGA CCAACGGTCGCGGCGAAGATGCGGGCGGTATTGATGAGTGGTGGGCTCGA GATGAAGACCAACACTTTTACCAGACCAGCCCAGACGCACAACCCGAGAA ACAGCTGGGAACGCACCGAAGGCCCAGTTCTTCAGACGGCGGTGGCGGCG GTAGCGGTAGCAGTAGACTGTGGGCGTCCGGCGGTGGGACTATCGAGAGA TTGGGGACTGACGACGGTGACCGGGGATCGGTAAGAGGAGGAGCAGGAGC GTCCAGGGGGCGGCGACCTCCGCACGAGGGGAGGGGAGGGTGGACGAGAA GCCCGACAGCCTCGGGTGGTACCAGGCCAATGACAACCATGGCCGTCTCG CGAGGGAAGAGTAGGCATGGAACCAAGGATGCCACCACCGGCTTGCCATT GAGGTGAATCAGGAGACGTGGGGGGAGGCATGTGATAGACTGTGGGGCAA GCGGGAGATAAGAAACGGGTGAAGGGCTGATCGTCATGCGCGCGTTGGAT AGGCTGGCGACAAAGTTCTTGAGCCGGAGGGGGGTGGTGGAGGGATACCC GAAAATGAAACGACACTTAGACTGCTTCAACAACAGCTGCTCGTGACGTG TGGTCGACATCATTACTGGAGTAGTCCGAGTGAGTGGAATGCAATTTTTT ACGTGGTATTGCCCTCTACGCTTTGAATATTTTTGTGATTTTCAGCGGTA CCGAGAGCTGGAACGACGACCGGTGGAGACTGACTCGCTACCTCCAAGCC TGCCAAAAGGAGCTCACGGAAGCAGAGTGAGCCACCGAGCCAGTCAGGAC GCCAGCCATCTGGTCAATCGATTCCCGTACCAAAATCTCAGCACGGGCAT CGATATTGTGCCTTCCAAGTTTCTTCAACAGAGTGAGCTGTTGCTCTGAT GGACCACGCGTTGAGAATTGCGACATGAGTGGCTTGCTCCACAGGGAACA TTGATGCACCCCAACAATTGGTTCCTCTTCCACGAATGCAGGGAGGGCCG ACGGAGGGCAGAAGCAGCTGCGAACGCTGCCGAACGAAGGGCATGGAAAA CCGCCGACGTCAGCACCACCAACGTATGTTTTCGTGCACACATCGTTTAT CTCTGCCACATCTGCCGTGGTATGTTTTGCCAGTAAGAACGGGCTGTCGT TCTGCCGGAAACTTCCTTGGTCGGGGTAGTGACCAAAGCGTCAGAGCATC GCAACTTTTGCCGAGATACTGCCCGGAATAGTGTTCAGCTGTTCTTGACA ATAGTTCTGGGAGGACAAGCTTGATACGAGAAACAACCTTCTGGCACAGA CTGGCGAAGCTGCGTGGAATTGCCCGCTTACTGCCGCATTTTGGCGCACC TGACTACTTCTTCTGGAGACGCAATATGTTCACACACTTCACACAACCCC GCATCGCCACAACAACAGTCTAGAGGTGGCGGCGACGACGACGCCGAGAA GCGGGCCTGGGCATGAGCGGCGACCCAGCGGGTGCTGGATCTCATGCTGG TGACGGAGAGGGTTCGCCAGGAAGAGCAGAAGCGACGCGTCGCTGAGGCC AGCGCAAACAACCAGGTGCAGTGGGGGGGAAGAGGACGGGAGGGCTGCGC GAGGGCGAAATGA
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Coding sequence (CDS) from alignment at Scaffold_129:800387..805049-

>EsuBft525_22a-0001 ID=EsuBft525_22a-0001|Name=EsuBft525_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1893bp|location=Sequence derived from alignment at Scaffold_129:800387..805049- (Ectocarpus subulatus male Bft15b)
ATGGTAGCCACCTCGGTGGCACCCGAAAGGGCGCAAGAGGTTGCGTCGGC
GGCAGTGTCAGAAACAGTGTCAGCTATGTTCGACAGCGCGACCACGATGG
CAGTAGCCGCCGTCGAGAGACCCGTGCAGCAGGTGCTGGCCCCAGCGACA
GCTTCGACATCCTCGGGTCACGAAACAGCCGTCGTCCCGCCACTGCTCTC
TGACGCTCCCGAATTGTCGAAGGACCGTGCCATCAGCATTATCGAGCTGT
CCGGACGTGATCGCGAGGATGAAGAGAGTTTTGGGGGTGAAGAAGGGACG
GCGTTGAAGCCTCCGGCAGAGGCTCTGCTCTCTCCTCCCCCCCAGCACGT
GAGAAACGAGAGCGATACTCCTGTAAAGGCGCCTAATAGGAGCAGGACTA
GCCGGGGAGATGACGACGATGCGTTGGTGATCCCCGACGTAGATCGTCCC
ATTAATGACGAGGTCAACAAATGTGATGACGCGGAGGGAGCCCACCCGGA
GAAGTACGAACGCAAAGGCATGCGCGATAAACAAGGAGGTGGCGCGCGCC
AGGAAGACACGCAAGAACGGGTCGGCAACGGGAAAGCGCAAGACGACAGC
ACAGAGAGACAGGGAGGACGAGAGAACAAGGTAGACTTCGGGGAGGAAGT
CGGGTCGTCAAAGGATGGCGATGGCCAAATGTTGCATCATTCCGGGCCCG
AAGACGGACCAACTGTCTTAGTGTCGGGAGTGAGAAAGGGTGCGGTCGTA
CAGGTTGTCGAAAGGTTGCATCCGTCGTACCAGCTGATCGTCTCGGTGAG
GCTGGCTGCGAGCGCTCTGTCGTGGGTGGAGCGGAATGGCACGCTTGATG
AAAGCAAGAGCAGCCACCGTCAAAGAGGTAGAACTGCAACCTCCGAGGAA
GGAGGCAACCCGGTGAACGAGTACGGCAAAGCTACCGTAGCAGCAAGTCT
GTCCCTCGGAAAGTCGGAGATAATGGGAGCTATTGAGAGGCCCGCCACCG
CCGCCTTACCAAAAAAGACCCCGCCGCCTCACTACTCAGAGGCTATGAAA
TTCTACGCCGCAACGCAGCGCTCATCACCGACACCGAAGACCGGTCCTGC
GCAGCACCACCATCAAAGAACGCCATCCTCTCGAGAGGCGGCAACAAGAC
ATGTGCCGTCAGGCTCTGTCATATCGAGTGGCGACGCCTCCTCGTTCTCT
TCCGACGGGGACGCTAGCCTTGGGCCTCCTCCGAGCTACCACTCCACAGC
GTCGGGTGGAGGGACAGCCCGCTCCTCCTCGGCGTCCGCGGAGGGAATGG
AGGATGAGAAAGACCGCCTCGCAAGGGACCTACCGCCTCCTTCGTACGGG
AGCCCAGACGCACAACCCGAGAAACAGCTGGGAACGCACCGAAGGCCCAG
TTCTTCAGACGGCGGTGGCGGCGGTAGCGGTAGCAGTAGACTGTGGGCGT
CCGGCGGTGGGACTATCGAGAGATTGGGGACTGACGACGGTGACCGGGGA
TCGGTAAGAGGAGGAGCAGGAGCGTCCAGGGGGCGGCGACCTCCGCACGA
GGGGAGGGGAGGGTGGACGAGAAGCCCGACAGCCTCGGGTGGTACCAGGC
CAATGACAACCATGGCCGTCTCGCGAGGGAAGAGTAGGCATGGAACCAAG
GATGCCACCACCGGCTTGCCATTGAGGGAGGGCCGACGGAGGGCAGAAGC
AGCTGCGAACGCTGCCGAACGAAGGGCATGGAAAACCGCCGACGTCAGCA
CCACCAACCGGGTGCTGGATCTCATGCTGGTGACGGAGAGGGTTCGCCAG
GAAGAGCAGAAGCGACGCGTCGCTGAGGCCAGCGCAAACAACCAGGTGCA
GTGGGGGGGAAGAGGACGGGAGGGCTGCGCGAGGGCGAAATGA
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