EsuBft509_7a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft509_7a-0001
Unique NameEsuBft509_7a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_235contigScaffold_235:323119..332790 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7FNF6
ProteomeIdEsuBft509_7
Protein domainsPTHR12785
Protein domainsIPR007180
Protein domainsCoil
Protein domainsIPR006568
Ownerapollo_admin@sb-roscoff.fr
Notesplicing factor 3b subunit 2 os:homo sapiens gn:sf3b2 pe:1 sv:2 [Automatic annotation]
Nb exon8
Max annot lvl2759|Eukaryota
Length3467
Hectar predicted targeting categoryother localisation
Evalue0.0
EggNOG OGsCOG5182@1|root,KOG2330@2759|Eukaryota
Date last modified2016-06-13
Date creation2016-06-13
Preferred nameSF3B2
KEGG koko:K12829,ko:K16061
KEGG Pathwayko03040,ko04120,ko04215,ko05145,ko05200,ko05222,map03040,map04120,map04215,map05145,map05200,map05222
KEGG ModuleM00352
GOsGO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005686,GO:0005689,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031974,GO:0031981,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0065003,GO:0070013,GO:0071004,GO:0071010,GO:0071011,GO:0071013,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:1901360,GO:1901363,GO:1902494,GO:1990904
DescriptionmRNA splicing, via spliceosome
COG categoryA
BRITEko00000,ko00001,ko00002,ko03041,ko04121
Cross References
External references for this mRNA
DatabaseAccession
GO0005689
GO0031227
GO0000398
GO0071013
GO0005730
GO0005622
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft509_7aEsuBft509_7aEctocarpus subulatus male Bft15bgeneScaffold_235 323119..332790 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft509_7a-0001EsuBft509_7Ectocarpus subulatus male Bft15bpolypeptideScaffold_235 323535..331743 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft509_7a-0001-exonagat-exon-86004Ectocarpus subulatus male Bft15bexonScaffold_235 323119..323903 +
EsuBft509_7a-0001-exonagat-exon-86000Ectocarpus subulatus male Bft15bexonScaffold_235 326322..326723 +
EsuBft509_7a-0001-exonagat-exon-86005Ectocarpus subulatus male Bft15bexonScaffold_235 327654..327821 +
EsuBft509_7a-0001-exonagat-exon-86002Ectocarpus subulatus male Bft15bexonScaffold_235 328416..328478 +
EsuBft509_7a-0001-exonagat-exon-86003Ectocarpus subulatus male Bft15bexonScaffold_235 329399..329536 +
EsuBft509_7a-0001-exonagat-exon-86006Ectocarpus subulatus male Bft15bexonScaffold_235 329890..330082 +
EsuBft509_7a-0001-exonagat-exon-86001Ectocarpus subulatus male Bft15bexonScaffold_235 330639..331137 +
EsuBft509_7a-0001-exonEsuBft509_7a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_235 331572..332790 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft509_7a-0001-exonagat-five_prime_utr-11070Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_235 323119..323534 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft509_7a-0001-cdsEsuBft509_7a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_235 323535..323903 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft509_7a-0001-exonagat-three_prime_utr-17426Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_235 331744..332790 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft509_7a-0001 ID=EsuBft509_7a-0001|Name=EsuBft509_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3467bp|location=Sequence derived from alignment at Scaffold_235:323119..332790+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GAGAGGCGGTCCAAGACTAGGACCGAGGGACGAGGCAGAGGGGGGAAAGG
GAGCAACACTCGGTTGGCGTAGAGATAGCACAGCCGTTGATTTGTATTGC
TGTCGGCAGAGATCCCGCCTGATCTGCGTGGATCCAAGGCCCGCAGGCGT
AACAGAGAGGGCTTTTGGAAGGCAGGCCTTCCCTGCATCATACCCACGGA
CGCGGTAGGCACCAACGCGCCCTGATACAAGCTTCGTGCACTCCCGAACG
GTGGAGAGCACACGGAGCAAAGACACTGGCAAATCGCTATATCCGAGCTG
GTCACTCGCTGGAAGGAAGCTGAGCGGCGCGCTCTATCGTTGTTTTGCCG
ACGGGATCGCGCGCTTTCGGGAGAGGCGAGAGGAGCAAAGCAGCAGGCGT
TGTTCGTAGGGCGAAAATGGTTAGGCTCGTGGTGAACAACATGGCCGGCG
TGGTGAACGGTAAGGCGCCGCCATCCGATCTCGGTCTCGCGAAAAACAAG
GGCAGCAGTGGCAACGGCGACGACAGGAACGGAAACGGCGTGGCCAAGGC
GGCGGTGGGGAACGATGGTAGCGGGCGAGCGGGGCAGGGAGAGGGGAATG
GCGGCACGGCGGCGGCGCCGCGGAAGCTGACCAAGAACGAGAAGCGACGG
CAAAAAAACAAGCAGAGAAAGGCGCAGGCCGTGGAGGGCGCGGTGGTGGA
GAAATCTATGGCGGAATCGAATGGCGTCGCCGTGGCTTCGTGGCCACCCC
CGCCGGCACCGAAGGACGAAGCGTCGGATGTGCAGGTGGAGTACGTCGCC
GACAACACCTCGGTCCTCGACGGGGCCGAGATGGACGCCGCCTCCCTCGA
GGAGTTCAAGCAGATCTTCGAGCGGTTCACCAAGGTCGCGGACGAGGCCA
GCGGCGCCGCCGCCGACGCCGCGGAGGCGGAGGCGGAAGCGGCGGCGGCG
GCGGCGGAGGCGGCGAAGGCGGCCAGCAAGAAGGCGGCGGCGGCGGCGGC
CCGCGGGAGCGACGGCGAGGAGGAGGGGTCGGACGAGGAAGGGGCGGGGC
CCCGGTTGTCCCGGAAAGCGCGAAAGCTCAAGAGCAGACTTTCGGTGGCA
GAGCTTAAGCAACTCGTGCAGCGGCCGGACGTGGTAGAGGCGCACGACGT
GACGGCGGCTGACCCGCGCATGCTGGTGTTTCTCAAGTCCTACCGCAACA
CGGTGCCGGTGCCGCGACACTGGTGCCAGAAGCGAAAGTACTTGCAGGGG
AAGCGAGGGATAGAGAAGACGCCGTTTGAGCTGCCGGAGTTTATCGCCAT
GACAGGCATCGATAAGATCAGGGCGGCGATCGAGGAGGCCGACAGTCAAA
AGAAGGCGAAGCAGAAGCAGAGGGAGAGAGTCGCTCCAAAGATGGGGAAG
ATCGACATCGACTATCAGGTGCTTCACGACGCGTTCTTCAAGCACCAGAC
CAAGCCGCCGCTGACAAACCCGGGGGATCTGTACTACGAGGGCAAGGAGT
TTGAGGCCAAGAACCAGGAGCACAAGCCCGGGCACATCAGCTCAGACTTG
AGAGAGGCGCTGGGCATCGGAGAGGACGACCCTCCGCCATGGCTCATCAA
CATGCAAAGATACGGGCCGCCGTTGTCCTATCCGCACCTCCGAATCCCGG
GGCTCAACGCTCCTATCCCAGCGGGGGCCCGGTACGGGTTCGGTTCGTCG
GAGTGGGGAAAGCCTCCGGTGGACTCGAAGGGAAACCCTCTGTACGGAGA
CGTGTTCAACCTGGCCGCGAAGGACGGGGACGACGTCGAAGAGATGGACA
AGTCTCACTGGGGAGATTTGGCCGAATCCGACGACGACGACGACGACGAC
GAGGAGGAGGAGGAGGAAGATGAGGAGGAGGAAGACGGCGGGGCGGAGAC
GCCTATGTTCGAGGGCGGCGGCGTCTCGAGCGTCTCCGGGCTCGAGACGC
CGGACACGATGATGGACCTCCGCAAGAGGGCCGGGGTGGACACCCCCGAC
ACGACCGGGCTGTCCGCGGTGCCCCAGGAGCTCTACAAGGTGGTCCAGGC
GAGGGATTCGGCCGTGGGGGCCGGGGCTCTGTTCGGCGGGGACCGAAAGT
ACGTCCTGCCCGGCTCCAAGGCCGGCGGGGGCGGCGCGGCGGGGCTGGGC
GGGGACGCTACCGAGGCACCCCCGCGGGACGTGCAGGTGTCCCTTAACCC
CGACGAGGTGGACGAGCAGCTCAACGACGAAGAGGGCCTCCGGGAGAAGT
TCGAGGAGCAGGAGCGAGCAGCCGCGTCCGTCGGCGGCGCCAAGGGGAAG
GAAGACGTGAGCGATATCGTGGCCGAGGAGAACCGTAAGCGCAAGCGCAA
GCTCGAGAAGAAAGAGAAGGAGAAGGCGGCCGACAAGGGCAAGCGCTACA
AGGACTCCTTCAAGTTTTAACGCTTTGCGGTACGCGTGGTTCTCGGCTCC
AATGTTAGTTTTGTTTTGTGTTCGACAGGATTCGTGTGTGTGCTGTGCTT
CTCTTGCCTCGTTTTTTTTCCCGGTTGGTTTGGTCTCTTGGTCGGTCGGT
CGTGCGACTGCTGTGGTCTTCGATCATCTTGACCGTGGCTGCTTTGTTTT
GTTTGATCTTGGCTGGTTTCGTTCTTATTGTATTATTGTCTCTTTCTTCT
ACTCAGGCTCTCCCTAGTGAACTACTTTGGTTCGGCTTGTTTCCTGTCTT
GGTACTTGCATCCCTGCTCGGTCTTCGCAGATGGAAGAAGATTGACCTAT
GTAGATGGTCTAGCTCTCGCCGTCTTTCGCGTTTGTCGTGCGCTTTATTT
TGAGGCGACGGAGACGGTGACGATACAAGAAGATGCCGATCGATATGGAA
ACAAGGAAAAACAACAAAAAGAAATGCCGGCTTATGTAGCGTTCAACCAG
CGCCCGTGGCTTTAACAAATAGAAAAAAGGGTGGGGAGCCCGTGGTTTCC
TCTCGTCTTGAGAAGCAAGGCAAAAAGCGCGGCCATCGAAAGGGTCCGTG
TTGCGGCTCCGAGTTATCCTTACGCTTATTTTTCTGTCTCCACCAGCCGA
GGGACTGCTAGCAATGGTTGACTGGGGGGGACGATGCTCCAAAGGGGTAT
TTATCCACGTGCAGGGGCGAGGCGCGTCTGGTTGTCGTCCCCGGCCGCGG
TCTGCGCGAGCCAGTCAGAAGAACGTGTGATGTCTAGCTCTTGGTTGTCT
GTCCGGTTTGAACACGGCCGTTCGGCGAAGAAGTCAAGGATATATATTTT
GCCGCTTGTGGCGGCGGCGGCGGCGGCGACGACATAGTGCCGCAAGAATC
GTTCGTTTGTGCCGACGGTAGGCTCTCGTTACACCAGTGGTCCACTTCGT
GTGGTGTGTCGGGAGAGCAAGCGACGACGGCGTATGCACGGTGTCTGCCG
TGTCGTGTGTTTTTGTTCGTTGCCCGCAAAAGCGTGGGAGAAGTACTGGG
CGTACCCCAGGGGGGCG
back to top

protein sequence of EsuBft509_7a-0001

>EsuBft509_7 ID=EsuBft509_7|Name=EsuBft509_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=667bp
MVRLVVNNMAGVVNGKAPPSDLGLAKNKGSSGNGDDRNGNGVAKAAVGND
GSGRAGQGEGNGGTAAAPRKLTKNEKRRQKNKQRKAQAVEGAVVEKSMAE
SNGVAVASWPPPPAPKDEASDVQVEYVADNTSVLDGAEMDAASLEEFKQI
FERFTKVADEASGAAADAAEAEAEAAAAAAEAAKAASKKAAAAAARGSDG
EEEGSDEEGAGPRLSRKARKLKSRLSVAELKQLVQRPDVVEAHDVTAADP
RMLVFLKSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFELPEFIAMTGIDK
IRAAIEEADSQKKAKQKQRERVAPKMGKIDIDYQVLHDAFFKHQTKPPLT
NPGDLYYEGKEFEAKNQEHKPGHISSDLREALGIGEDDPPPWLINMQRYG
PPLSYPHLRIPGLNAPIPAGARYGFGSSEWGKPPVDSKGNPLYGDVFNLA
AKDGDDVEEMDKSHWGDLAESDDDDDDDEEEEEEDEEEEDGGAETPMFEG
GGVSSVSGLETPDTMMDLRKRAGVDTPDTTGLSAVPQELYKVVQARDSAV
GAGALFGGDRKYVLPGSKAGGGGAAGLGGDATEAPPRDVQVSLNPDEVDE
QLNDEEGLREKFEEQERAAASVGGAKGKEDVSDIVAEENRKRKRKLEKKE
KEKAADKGKRYKDSFKF
back to top

mRNA from alignment at Scaffold_235:323119..332790+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft509_7a-0001 ID=EsuBft509_7a-0001|Name=EsuBft509_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=9672bp|location=Sequence derived from alignment at Scaffold_235:323119..332790+ (Ectocarpus subulatus male Bft15b)
GAGAGGCGGTCCAAGACTAGGACCGAGGGACGAGGCAGAGGGGGGAAAGG GAGCAACACTCGGTTGGCGTAGAGATAGCACAGCCGTTGATTTGTATTGC TGTCGGCAGAGATCCCGCCTGATCTGCGTGGATCCAAGGCCCGCAGGCGT AACAGAGAGGGCTTTTGGAAGGCAGGCCTTCCCTGCATCATACCCACGGA CGCGGTAGGCACCAACGCGCCCTGATACAAGCTTCGTGCACTCCCGAACG GTGGAGAGCACACGGAGCAAAGACACTGGCAAATCGCTATATCCGAGCTG GTCACTCGCTGGAAGGAAGCTGAGCGGCGCGCTCTATCGTTGTTTTGCCG ACGGGATCGCGCGCTTTCGGGAGAGGCGAGAGGAGCAAAGCAGCAGGCGT TGTTCGTAGGGCGAAAATGGTTAGGCTCGTGGTGAACAACATGGCCGGCG TGGTGAACGGTAAGGCGCCGCCATCCGATCTCGGTCTCGCGAAAAACAAG GGCAGCAGTGGCAACGGCGACGACAGGAACGGAAACGGCGTGGCCAAGGC GGCGGTGGGGAACGATGGTAGCGGGCGAGCGGGGCAGGGAGAGGGGAATG GCGGCACGGCGGCGGCGCCGCGGAAGCTGACCAAGAACGAGAAGCGACGG CAAAAAAACAAGCAGAGAAAGGCGCAGGCCGTGGAGGGCGCGGTGGTGGA GAAATCTATGGCGGAATCGAATGGCGTCGCCGTGGCTTCGTGGCCACCCC CGCCGGCACCGAAGGACGAAGCGTCGGATGTGCAGGTGGGGGTTTCGGGC GGTTTTGTACCGTTTGCATCATGTGTGTGTATATGCTCTCCGCCGTCTGT CTGTGCGTGGCAACAGCTGTTTTGCAACGTCCACAGCAGCAGGTCAGCCG TCCCCTCTGGTGAACTCCTCTGTTTGTTCTGATATCCCTCCTTTACACCA GTATGCGGTACGCGGACTCTTGCAACCAAGGTTAGGAGAAGACAGGCTCT TGGTGCGACGGGCGTGTAGTTGTGGGTGTGGTTCGTGTGCTCGTGTGTGA CCCCAACAGCCCGCGTGGTACCATAAGATTGAGTTGCGCTAGGCATATTT GATCGCAAGTTTGGCACCGACAGCCACCAACAGAACTATGTGCATGGCAG GTACGAGACGTTGGCGTCGGTGACAGTTGCTATTGACTATTTGACCTCTC CCTCTGTCTCACGCACACAGCACCTCTCTCTCTCTAGAAAGTGTCGAGGT AGGTCAGCGCGAGTTGGCGGTTGCACAACAATGGACGGTTTAAACAACTA TTTCTATTTCCTTATCGTATCTATTTATTAATAGCGTAAATACGATTGCT GCTCTGTAGTCGTGAGTACGTAGACATCGGCAAGCAAGTACCCGACGAGA AGAGATTCGGATTTTCCTCCCGTATCACCCAATCTGTTACGTAGGCGTAA CCTTTAGCTTTAGGCTGTCGCCCAGATGGGACGAATTTAGAAATACATTA CACAATGCTCTGGCAATTGCGAACATCCATGATTCAATGTCTAAGGACTA CAAGCAGTGTATAGAACGAAAACACACACAGCAGTGTTGACAGCCGATCA CGATTCGATAGGTTTTCACCAGCAGTCAATTACATCATACTTTGATTCCA AAAACGTCATGGCGAGAGAACGCCTCGACTTTCTCATTCGATTACACAGA AGCGTTGAAAAATGGAGGCGAGCCGCCCCGCCGGATCCTTCTGCACTTGC ATACACGTACGGTTGGACTTGCCCAGTACAGGAAGGGAGGACCGTGAGGG AGGTAAACACAAGCAAAAGGATGGTGATAACTAGAAACCAAAATCAGAGG TAATGTGTTGATCATCCTCACGGAAATTTCGACCGGGCGATATCTACCCT GTTATCCCCCAGCCTTCGCGATCACCAAGGTCCTTCGGTACCGTAGGTGC AGCTTTCAGGCTGCTGCTCCCACGCGCGGCCAGCACAAAACGATAACGGC GCCGAGCTTTTGCCGCCTGCGTGTGAGGTCTAGTGGGGTGACGGGGCGAA AAGATAGACAGAGCAGCAGTCGCAGATGGGATGGTTGTGAACGTAGGTAT TCACGAACAATAGCAGTAGCAATAGTTGTCGGACGGCCTTGTGTATCTAC GCCTGGAAGAGCTGTGGCGATCTCGAAACACGCTCCAAACAGGCTGGGAG GCGTTTTTGTGTCAAGGCACAAATGGCGTATCGTGATGTGTCCTTGTGGC CTGCGCAAAGTTATGCGAACTCAGTTGACACTTCCTCCTCCTTGTCAATG TGATACGTTTGCTCCGACGATGCATAATATAGTTGCCTTGTGCTATTTCT CCTCTACCACGAATTAGCCCTCGGTGGTCAAACGACAAAGAAGCTACTCT ATCGTCGGTGTCTTGTTTACCAGGTTGGGCAAAGGAAGTATGGTACGGGC CGGTGATTGGTCGCACTTGTGCGAGGCTAGAGGTTAGTGTACTGTTCCTT GCCCTATCGTCGGTGTGACACCCTCCCTTCCCTTCCTCCAGTTTTGAGAA GAAAAGGGAAACAGGACGAGAGCTGGAGTCGTCGTAGATCAGAACACAGA CGGATGGCGGGAACTTTTGGCCGAGTGGTGACTACGAATAGCACAGGCAA CGGGTCGTTCAACAAGACTCCCCGTAATACGAAGACCAAGGACAACGAGG AAAACACGACTACCTTGGTCAAATGGCAGGGCGCCGGATATTGGGGCGGA ATCATTCGGCAGGTTCTATGCCCGCAGCACAGAGGTCATCGGCCGGATAT TAGCGTCACGCTGAAGCTGAGGAGGCTCATGCCGGGTGAACCTGAAGCTG AAGAACACATGCCAAATCCGAAAATCAACAACAACGAAACGGAAGACACA GCAACAGTAACAGCAACGACATTTGCTTGATTTCCTTCGTCAGTTCGACC ACCACTTCGTAGGCTTTGTTCCCACATGAACGAGTTGGAGGGTTCCCCCG CTCACCACTCAAAGGAACAAGAATGGGCTATGCTTCTCGCCATCTCCTCC CTCTCTTTTTCAACTCCCCAATTTTTTGTTCTTATGCGCCTTGTGGCTTG TTGTTATTGTCACTGGGATTCGCGTTTATTCGAAACCAACACGACCCCGT GAAACATTGGACGACCGGCCTTTTTATCTCGGAAACCCGCGACAATATAA CAGGTGGAGTACGTCGCCGACAACACCTCGGTCCTCGACGGGGCCGAGAT GGACGCCGCCTCCCTCGAGGAGTTCAAGCAGATCTTCGAGCGGTTCACCA AGGTCGCGGACGAGGCCAGCGGCGCCGCCGCCGACGCCGCGGAGGCGGAG GCGGAAGCGGCGGCGGCGGCGGCGGAGGCGGCGAAGGCGGCCAGCAAGAA GGCGGCGGCGGCGGCGGCCCGCGGGAGCGACGGCGAGGAGGAGGGGTCGG ACGAGGAAGGGGCGGGGCCCCGGTTGTCCCGGAAAGCGCGAAAGCTCAAG AGCAGACTTTCGGTGGCAGAGCTTAAGCAACTCGTGCAGCGGCCGGACGT GGTAGAGGCGCACGACGTGACGGCGGCTGACCCGCGCATGCTGGTGTTTC TCAAGGTGGGTTTTGCTTTCGGCGGGGCGGGGTACTCATGTCGTATCTAG TCGATAAGAACTACTGGCCTCGCATCCTTGCAATATGCCGGTTTTTCGCC GGCCCAGGCTAGGTTTCATGTGTAGGGGAGGGTGAAGTAGATACGATAGC ACCGACAATGGCGAAGCGGACATGGTTGCACAGAGCAGTGGATGCTTCTC TCTGCATTTTGATGGGTTGCGTGAAGACCGGCATTGGGTTGGCCAAGACT TTGAGTTAGGCACGCCATTCTTGTGCTATAGCACACGGAAAGAGATGGCT ACTCACGCCTAAAGACGGGGCCCCTGTCAGGAACGCGCTTGGCGGGGATG CATAGGGTGGTGAAGGCGAGCGCACGTTGTTGAGGTGTTCGCGTTTTGGC TGATCAAGTTGGTGCGAATGAGCACGAGACAGGGAGCTTGTTCATCTACG TGCGGCTGCCGAGCCCCGTCAGGCAGTCAGGCAGTCAGGCAGCCAGGCAG TCACCACCTCCGCCACAAGACAACAACCACCTCTTGTTTTTCCGCTCTAG CGTGGTGATCTCTTTGTCACAAGCGGCACCGCGCACCGTATAGCCCCGTT GCGCTGCAAGCAGCAAAAAGAGCACTAACAACCCCGTGTAGGTTGTGCTC GGTTCCCTCCTCTCTCCCTCAATACGGAATGGAAAGACACCAGCCAGTAG CAAGGAATTCGTGCTGCGGAACGTATTGAAGATAATCGTCGAGAGGTAGC CCCGAATTGTTGGAGGCATGTCTGCAGGGGGAATCATTGGCGGTGTCCCC ACCTGGAAAAAGTAGTGGTTATTCAATGGCCTCGAGTCTCTGCTGTTAGG CATAGCTGGGACCGCTAGGCAGACCTCGGCACGACCCTCCCCCGTCAATT ATCGTTTCTTCCTGTCTTGCAATCCGCTCGCGCAGTCCTACCGCAACACG GTGCCGGTGCCGCGACACTGGTGCCAGAAGCGAAAGTACTTGCAGGGGAA GCGAGGGATAGAGAAGACGCCGTTTGAGCTGCCGGAGTTTATCGCCATGA CAGGCATCGATAAGATCAGGGCGGCGATCGAGGAGGCCGACAGTCAAAAG AAGGTGACGGGGGGGAGCGGGGCTTGCATGGCTGCTGCGTCTCGTCTAAC TTCTGTGTTGTTTGTGCATGGCATGCCGTTGCGTGGGTTTCTGTCTGCTT TTTTTTTTGTGAAGGACGAGAGAAAGACGGCAGTGGGAGGGCGGGGGGGG CTCTGCACGTTCCTGCAGATTGGGTTGATGATTTCGTTACTTCTGCTTTG TTTTCTATTGTGTATGATATGTGGGAGTTAGGTTTTTTGTGAAAGGCGGT GATTCTTTTCTTGGTGTTCCTGACGTCCGGTTGTATTCTACAAACGGGAA ACTCACACGGCAGATGGGCGTGATGAGTGGTTGCGGCATCGGTGCCTTCT CCCCAGACACTTCATCGTAGATTCGATGATATCGTAGATTCGATTACGTC GGAGGTTCGACATTCCCCCTGGGTATTCCTTGTACCTCTCTAGAAACACG CGGCACCTCCCACGCTCCTGGTTTGCCTGTTTGCCTGTTTGCCTTGTCCG TTATGTCTCGCTCTTTGGTCCACCTATTTGTTTGGTTGCGGTTCGGGACG ATGTCGTCCTGTGGGCATCTTTCCTATCGCCGTCGTCTGTCTCCCAGGCG AAGCAGAAGCAGAGGGAGAGAGTCGCTCCAAAGATGGGGAAGATCGACAT CGACTATCAGGTGCGGCGGTTATGCACTGACATGAGCACGCGGCGTGTTG ACGTGGGCCCCGGAATAGCTCGGACGGTGTCCTGTGGCTGTTGATGCTTG GTGGCCGTCACAATATTCTCCACCAGATTATGTAGTTCTGACACGAAACG AGAGCGAAGCTTTGATTGCTACGAAATGCAATGTAGTCAAACTCAACCAT TTACAGCAGTGGAAGGAGGGTTGATTATCCCGTTGTCACGATAAATCGAA CGCATGCGAGAAGCATAGCAGTGAACAAAAAGAATTGAAAACTTCGTAGA AACGACGCCCCCCCCAAAAGGGGGGAGTCATCCCGTTGGCAATTTTGCCG ACCAGATTCCGGTGAAAAGTCTTTTTCCGCTTGAGAAGATCCCCGTCCGC CACCTACCGCGGCGAGCACGAAAATTCTGCGGCATTCCGTNGCTTCAGCC CTGATGATAGCAACAACAGAAACGCCCTCGGCAACCACTATCACCCCCCC CCCCCCCCACACACACACACAAACACAACAGCCGCCGAAATGGTCTTAAT ACATTGGCATCCCTCCGGGGGCTGTTCGCCCGGGGTATATGTTGTATTGT TATTATTTTTTCAAAGATCCTCTGAAAGGGGAGCTGGAATATGAAGGGAC ACAACGTAGTTGGGAACACATGGGAAAAACGGATTTTCCGACGATGCGCA CCGCTCATGCCCGCTGTATATCCTTCCCTACAACGACCGGGAACGGTGTT GGCGTCTATGCATACGATCTTTTTGCATTTTGCGGTGTCAAGCCGTTTCA TCCGTCTCCAGAAAACCTTAGCCTTAACTCTGTGTGTCTGGGTGTTGGAA GTTCCTCCTGCAAACCGTACCGTACGACATTGCTCACGTGTGTGCTCCTA CTGCCCCCCCCCCCCNCCCCCCGATTGTAGGTGCTTCACGACGCGTTCTT CAAGCACCAGACCAAGCCGCCGCTGACAAACCCGGGGGATCTGTACTACG AGGGCAAGGAGTTTGAGGCCAAGAACCAGGAGCACAAGCCCGGGCACATC AGCTCAGACTTGAGAGAGGTTTGGCGCTATGTTGCTTCGGTCTTGTTTTT TTTTTCGTTTGCTGGTCACGTTTAGATCGCGAGCAAGAGAAGCGTCGACG AATACGTGCGTCGTAGATGGCACGGTATCTACACGGCATGTACTCCGCGT GTTTGGTTGGTTGTCAGGCTCACGTAGTGAGTATGTTGTTCATTTCGGAC ATGTCTCCCACGCAGTTAGTTTAGTGTGTAAGCGCGCTTGTGACGCGTGC GCACCAACAAAAGCTTGCGAAATGAGATGGGAATCGACGCCCGGCCTTCA TATCATCATCACGCTGCTGCTTCCCGCCGGGGTATTGTTGTCGGTGGCGC TTGCTTGGTGTGTGGCCGCAGGCGCTGGGCATCGGAGAGGACGACCCTCC GCCATGGCTCATCAACATGCAAAGATACGGGCCGCCGTTGTCCTATCCGC ACCTCCGAATCCCGGGGCTCAACGCTCCTATCCCAGCGGGGGCCCGGTAC GGGTTCGGTTCGTCGGAGTGGGGAAAGCCTCCGGTGGACTCGAAGGGAAA CCCTCTGTACGGAGGTGAGGCTGATCTAATTAGCTGCCGTTGTCTCTGCC CATGTTGTTTTTGCCTGGCTGGGGGGCACTTTGGCCATAGGGCGAGCTGT TGAGCTGTTTGCTGCCGTATGAGCATGCGCCTTATGGTTGACTTGATGTG CCATGATTGTGGGACATGACATTGTCGATCGTGCCGCCTCCTGCGTACAC CGAATCAAGCGAACCACCAACGATCGAGCCGCTTATCGCACGCACACATG TCGTACACAACATGCCGTGATGCCTACACTGCTGTACTCTCGCTTAGAAA CGCTCGCAATCACCCTCACACATACCGCCACTGCCCCCCCCCCCCCCCCC CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNCCCCCCCCCGCCGCGACCGTCCTCAACGGAACATGAAAAACTACG CGGAAACACGATCAATATAGACGTGTTCAACCTGGCCGCGAAGGACGGGG ACGACGTCGAAGAGATGGACAAGTCTCACTGGGGAGATTTGGCCGAATCC GACGACGACGACGACGACGACGAGGAGGAGGAGGAGGAAGATGAGGAGGA GGAAGACGGCGGGGCGGAGACGCCTATGTTCGAGGGCGGCGGCGTCTCGA GCGTCTCCGGGCTCGAGACGCCGGACACGATGATGGACCTCCGCAAGAGG GCCGGGGTGGACACCCCCGACACGACCGGGCTGTCCGCGGTGCCCCAGGA GCTCTACAAGGTGGTCCAGGCGAGGGATTCGGCCGTGGGGGCCGGGGCTC TGTTCGGCGGGGACCGAAAGTACGTCCTGCCCGGCTCCAAGGCCGGCGGG GGCGGCGCGGCGGGGCTGGGCGGGGACGCTACCGAGGCACCCCCGCGGGA CGTGCAGGTGTCCCTTAACCCCGACGAGGTGGACGAGCAGCTCAACGACG AAGAGGGCCTCCGGGAGAAGTGAGAAGAAGAATCATTTGTAATGAGGATT TTGTTTTTCTGCTGCACTGCGGTAGGGTAGTAATGATTTACGCGCATGCA ATGCCAGAGAAACAAATGAACGCGCGTTCGAGATGAGAGGGGATGTGGAG GAAATCTGCTAAGGGTTTGCGCGCCTCCTGCCAAATATTGGACTTGGTGT TCGGAATTGTTGGGGCGGGGAGGGGGGTTGTTTTGGCTGCTGCCCTTTGT TTTTTCGGTTCACTGTGTGGAAAGTGGGGCTTTGTCTTTGGGTGCGTTCT CGTTTCCGCCGAAGAATGTGCGGAACGACGGGGGGGATAACAATTGCTCG TTCTTGTTTGTGTTCCCAACAGCGTGTCTTGCCTATCATCTCAGCTGACC TCCGTGCCCTCTTCTCAAAACCGCCCTGCCCTCCTCTTCCCCTTGTCCTC TAGGTTCGAGGAGCAGGAGCGAGCAGCCGCGTCCGTCGGCGGCGCCAAGG GGAAGGAAGACGTGAGCGATATCGTGGCCGAGGAGAACCGTAAGCGCAAG CGCAAGCTCGAGAAGAAAGAGAAGGAGAAGGCGGCCGACAAGGGCAAGCG CTACAAGGACTCCTTCAAGTTTTAACGCTTTGCGGTACGCGTGGTTCTCG GCTCCAATGTTAGTTTTGTTTTGTGTTCGACAGGATTCGTGTGTGTGCTG TGCTTCTCTTGCCTCGTTTTTTTTCCCGGTTGGTTTGGTCTCTTGGTCGG TCGGTCGTGCGACTGCTGTGGTCTTCGATCATCTTGACCGTGGCTGCTTT GTTTTGTTTGATCTTGGCTGGTTTCGTTCTTATTGTATTATTGTCTCTTT CTTCTACTCAGGCTCTCCCTAGTGAACTACTTTGGTTCGGCTTGTTTCCT GTCTTGGTACTTGCATCCCTGCTCGGTCTTCGCAGATGGAAGAAGATTGA CCTATGTAGATGGTCTAGCTCTCGCCGTCTTTCGCGTTTGTCGTGCGCTT TATTTTGAGGCGACGGAGACGGTGACGATACAAGAAGATGCCGATCGATA TGGAAACAAGGAAAAACAACAAAAAGAAATGCCGGCTTATGTAGCGTTCA ACCAGCGCCCGTGGCTTTAACAAATAGAAAAAAGGGTGGGGAGCCCGTGG TTTCCTCTCGTCTTGAGAAGCAAGGCAAAAAGCGCGGCCATCGAAAGGGT CCGTGTTGCGGCTCCGAGTTATCCTTACGCTTATTTTTCTGTCTCCACCA GCCGAGGGACTGCTAGCAATGGTTGACTGGGGGGGACGATGCTCCAAAGG GGTATTTATCCACGTGCAGGGGCGAGGCGCGTCTGGTTGTCGTCCCCGGC CGCGGTCTGCGCGAGCCAGTCAGAAGAACGTGTGATGTCTAGCTCTTGGT TGTCTGTCCGGTTTGAACACGGCCGTTCGGCGAAGAAGTCAAGGATATAT ATTTTGCCGCTTGTGGCGGCGGCGGCGGCGGCGACGACATAGTGCCGCAA GAATCGTTCGTTTGTGCCGACGGTAGGCTCTCGTTACACCAGTGGTCCAC TTCGTGTGGTGTGTCGGGAGAGCAAGCGACGACGGCGTATGCACGGTGTC TGCCGTGTCGTGTGTTTTTGTTCGTTGCCCGCAAAAGCGTGGGAGAAGTA CTGGGCGTACCCCAGGGGGGCG
back to top

Coding sequence (CDS) from alignment at Scaffold_235:323119..332790+

>EsuBft509_7a-0001 ID=EsuBft509_7a-0001|Name=EsuBft509_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2004bp|location=Sequence derived from alignment at Scaffold_235:323119..332790+ (Ectocarpus subulatus male Bft15b)
ATGGTTAGGCTCGTGGTGAACAACATGGCCGGCGTGGTGAACGGTAAGGC
GCCGCCATCCGATCTCGGTCTCGCGAAAAACAAGGGCAGCAGTGGCAACG
GCGACGACAGGAACGGAAACGGCGTGGCCAAGGCGGCGGTGGGGAACGAT
GGTAGCGGGCGAGCGGGGCAGGGAGAGGGGAATGGCGGCACGGCGGCGGC
GCCGCGGAAGCTGACCAAGAACGAGAAGCGACGGCAAAAAAACAAGCAGA
GAAAGGCGCAGGCCGTGGAGGGCGCGGTGGTGGAGAAATCTATGGCGGAA
TCGAATGGCGTCGCCGTGGCTTCGTGGCCACCCCCGCCGGCACCGAAGGA
CGAAGCGTCGGATGTGCAGGTGGAGTACGTCGCCGACAACACCTCGGTCC
TCGACGGGGCCGAGATGGACGCCGCCTCCCTCGAGGAGTTCAAGCAGATC
TTCGAGCGGTTCACCAAGGTCGCGGACGAGGCCAGCGGCGCCGCCGCCGA
CGCCGCGGAGGCGGAGGCGGAAGCGGCGGCGGCGGCGGCGGAGGCGGCGA
AGGCGGCCAGCAAGAAGGCGGCGGCGGCGGCGGCCCGCGGGAGCGACGGC
GAGGAGGAGGGGTCGGACGAGGAAGGGGCGGGGCCCCGGTTGTCCCGGAA
AGCGCGAAAGCTCAAGAGCAGACTTTCGGTGGCAGAGCTTAAGCAACTCG
TGCAGCGGCCGGACGTGGTAGAGGCGCACGACGTGACGGCGGCTGACCCG
CGCATGCTGGTGTTTCTCAAGTCCTACCGCAACACGGTGCCGGTGCCGCG
ACACTGGTGCCAGAAGCGAAAGTACTTGCAGGGGAAGCGAGGGATAGAGA
AGACGCCGTTTGAGCTGCCGGAGTTTATCGCCATGACAGGCATCGATAAG
ATCAGGGCGGCGATCGAGGAGGCCGACAGTCAAAAGAAGGCGAAGCAGAA
GCAGAGGGAGAGAGTCGCTCCAAAGATGGGGAAGATCGACATCGACTATC
AGGTGCTTCACGACGCGTTCTTCAAGCACCAGACCAAGCCGCCGCTGACA
AACCCGGGGGATCTGTACTACGAGGGCAAGGAGTTTGAGGCCAAGAACCA
GGAGCACAAGCCCGGGCACATCAGCTCAGACTTGAGAGAGGCGCTGGGCA
TCGGAGAGGACGACCCTCCGCCATGGCTCATCAACATGCAAAGATACGGG
CCGCCGTTGTCCTATCCGCACCTCCGAATCCCGGGGCTCAACGCTCCTAT
CCCAGCGGGGGCCCGGTACGGGTTCGGTTCGTCGGAGTGGGGAAAGCCTC
CGGTGGACTCGAAGGGAAACCCTCTGTACGGAGACGTGTTCAACCTGGCC
GCGAAGGACGGGGACGACGTCGAAGAGATGGACAAGTCTCACTGGGGAGA
TTTGGCCGAATCCGACGACGACGACGACGACGACGAGGAGGAGGAGGAGG
AAGATGAGGAGGAGGAAGACGGCGGGGCGGAGACGCCTATGTTCGAGGGC
GGCGGCGTCTCGAGCGTCTCCGGGCTCGAGACGCCGGACACGATGATGGA
CCTCCGCAAGAGGGCCGGGGTGGACACCCCCGACACGACCGGGCTGTCCG
CGGTGCCCCAGGAGCTCTACAAGGTGGTCCAGGCGAGGGATTCGGCCGTG
GGGGCCGGGGCTCTGTTCGGCGGGGACCGAAAGTACGTCCTGCCCGGCTC
CAAGGCCGGCGGGGGCGGCGCGGCGGGGCTGGGCGGGGACGCTACCGAGG
CACCCCCGCGGGACGTGCAGGTGTCCCTTAACCCCGACGAGGTGGACGAG
CAGCTCAACGACGAAGAGGGCCTCCGGGAGAAGTTCGAGGAGCAGGAGCG
AGCAGCCGCGTCCGTCGGCGGCGCCAAGGGGAAGGAAGACGTGAGCGATA
TCGTGGCCGAGGAGAACCGTAAGCGCAAGCGCAAGCTCGAGAAGAAAGAG
AAGGAGAAGGCGGCCGACAAGGGCAAGCGCTACAAGGACTCCTTCAAGTT
TTAA
back to top