EsuBft509_11a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	EsuBft509_11a-0001
Unique Name	EsuBft509_11a-0001
Type	mRNA
Organism	Ectocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_235:273035..274945-
coding sequence from alignment at Scaffold_235:273035..274945-

spliced messenger RNA

>EsuBft509_11a-0001 ID=EsuBft509_11a-0001|Name=EsuBft509_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1848bp|location=Sequence derived from alignment at Scaffold_235:273035..274945- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGGTCTCCCAGCACAATGTCTTCTTCATGAACGAGCTCATGACGTC
GATTCGGACGGCCATTGCCGAGGGCAGGCTGGCTGAGGAAGAGAATAAGT
GGCTCGCGCCGGGGCTACGGGCTAGGGATTTCCACAAGAGGGCGGCAGCG
GAGGCGGCGGCGGCGGCGGAAGCGGCTACAGGAGAGGAAAGCGGGGAAAC
CCATCACTAAGCTTGGAATCGGGTGAATGATTGATATGATTAATCGATTG
ATTGATTTTCGGAGGGGGGAGGGGAGGGCAGTAGATGATGACTGAGATTC
CAAGTTCGATAGGTCCGTTGATCACGTCAGGATGGCGGCTGTAGAGGCTT
CGCCAGCGGTAGGTTGGGCGGGGGGGGGCGTACTCATGGTTTGCATTCCA
TAATTGCTAGGGATGGGGAGGGGGAGTCTTGACACGGTAGGAGGGAGGGT
GAATATTGGCTTGTGTATTTGCGACCACGTACTGCAAGTGCTGCGGAAAT
GCTGTACATGGAACGTAGTGGTACTCGATTGCTCCCTTAGTCCTTGGGTG
TACAAAGGTTTGTTGCGTCCCTTGTACAGGTGCGTCCTGTTTCTGTCTGG
CGGCTGCGACTGCTCCGGTCATGCCACTGCTGAGCGTTCTTACGTGCTTA
TTTGTGTGTAAAAAACGGCTATGGTACGGTGCCCGCTCTACGGTTGTAGA
CGACTTTTGATTGGAAAACCAAGGAAGGCGTTTGACCGCTTCGAAAGAAG
ATGAGAAAAGCCGGGAGGCTTTCGCCGCTTGGATTGATACCCCCCCCCCC
ACGAGTACATTTTGGGCCGAAGTGTTGTGTTTGTAGGAGTACCATGTTAT
TTTGCTGGCCACCGGCGGACTCGTTTCGACGCTAAAGAAATAGCTCTACC
CTAAAGGGTTGTCGCTGGGGGGAGGGGGGCACGACTTGTGGTTCAGATGT
TGGAAAAATCAAAACGAAACTTTTCGTTCTTCGTGGCCAGGACGCAGCAA
GCTTCCCCGGCTGCTTTCTCCTTGCCCTTGCTTCTTGAAGGTTAGGTTGG
TCAGTTGTTGTTATTTTTTGACAATCGATGTGATGACTGTTTCTAGTGGG
GGCCTCAGCGGAGAGGGAGTGCGCGCGCGCATGTATGTGTGTGTGTGCCG
CGGGAGCTTAGTGGCGTATTCACGAATTTTCAGAACGCCAGTCCTCCAGT
GTGGTGCCCCCCGCCGCGTGTCTTGTTTTTACGCCCCCCGCCCCCTCCTC
TTGCATTGTTTGCGGAGGTCACGTTTTACGCAAGCTTTTCTTTGCCTTTG
AGACGGCAGCTGTTGTTTTTCTGTACTCCCTTGTCGTTGTGATATACTCC
ATATTCAATATTCAGCACTGATAATGCTGTTGCTGCAGCAACTCGGCAAA
CGGCCACGAAATTTTCCATTTTAGGCATAAAATGTAGGCTAGGATGAGAT
ATCTCCATTTTACCATCACATGTAGGTGTAGGTGATGAGCGATTCCGTGC
ATTCGACATGTTATTTATTTGTTGTACCCGCGGGTGACAATGCACATCCA
GGGGAGTTCGTCGCGAGAGTATATACCTACGGGAAACGTTTTTCGGGTGG
GGAGGGTCTAGGTCTGTGCGGTTTTGTTATGCCGTGTCTCGTACACAGCG
TTGCAGAGCGCTTTTGCTTGTAGTCGAAATATTGAACTGTACCAGGCTTT
TACACTAGGCAATTAATTGCACGTTGCAGTTGGGCGAATGTCAATGTCGG
GTTGTAGTACGCTGGTCTGTACCACTAACCACGCAGTAAGGCTTGGTATT
GTGCAGCGCGAAGAAAGGGCGGCGGGGGTGAATACGAGACTGATTCTG

protein sequence of EsuBft509_11a-0001

>EsuBft509_11 ID=EsuBft509_11|Name=EsuBft509_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=69bp
MLVSQHNVFFMNELMTSIRTAIAEGRLAEEENKWLAPGLRARDFHKRAAA
EAAAAAEAATGEESGETHH

mRNA from alignment at Scaffold_235:273035..274945-

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft509_11a-0001 ID=EsuBft509_11a-0001|Name=EsuBft509_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1911bp|location=Sequence derived from alignment at Scaffold_235:273035..274945- (Ectocarpus subulatus male Bft15b)
ATGCTGGTCTCCCAGCACAATGTCTTCTTCATGAACGAGCTCATGACGTC
GATTCGGACGGCCATTGCCGAGGGCAGGCTGGCTGAGGAAGAGAATAAGT
GGCTCGCGCCGGGGCTACGGGCTAGGGATTTCCACAAGAGGGCGGCAGCG
GAGGCGGCGGCGGCGGCGGAAGCGGCTACAGGAGAGGAAAGCGGGGAAAC
CCATCACTAAGCTTGGAATCGGGTGAATGATTGATATGATTAATCGATTG
ATTGATTTTCGGAGGGGGGAGGGGAGGGCAGTAGATGATGACTGAGATTC
CAAGTTCGATAGGTCCGTTGATCACGTCAGGATGGCGGCTGTAGAGGCTT
CGCCAGCGGTAGGTTGGGCGGGGGGGGGCGTACTCATGGTTTGCATTCCA
TAATTGCTAGGGATGGGGAGGGGGAGTCTTGACACGGTAGGAGGGAGGGT
GAATATTGGCTTGTGTATTTGCGACCACGTACTGCAAGTGCTGCGGAAAT
GCTGTACATGGAACGTAGTGGTACTCGATTGCTCCCTTAGTCCTTGGGTG
TACAAAGGTTTGTTGCGTCCCTTGTACAGGTGCGTCCTGTTTCTGTCTGG
CGGCTGCGACTGCTCCGGTCATGCCACTGCTGAGCGTTCTTACGTGCTTA
TTTGTGTGTAAAAAACGGCTATGGTACGGTGCCCGCTCTACGGTTGTAGA
CGACTTTTGATTGGAAAACCAAGGAAGGCGTTTGACCGCTTCGAAAGAAG
ATGAGAAAAGCCGGGAGGCTTTCGCCGCTTGGATTGATACCCCCCCCCCC
ACGAGTACATTTTGGGCCGAAGTGTTGTGTTTGTAGGAGTACCATGTTAT
TTTGCTGGCCACCGGCGGACTCGTTTCGACGCTAAAGAAATAGCTCTACC
CTAAAGGGTTGTCGCTGGGGGGAGGGGGGCACGACTTGTGGTTCAGATGT
TGGAAAAATCAAAACGAAACTTTTCGTTCTTCGTGGCCAGGACGCAGCAA
GCTTCCCCGGCTGCTTTCTCCTTGCCCTTGCTTCTTGAAGGTTAGGTTGG
TCAGTTGTTGTTATTTTTTGACAATCGATGTGATGACTGTTTCTAGTGGG
GGCCTCAGCGGAGAGGGAGTGCGCGCGCGCATGTATGTGTGTGTGTGCCG
CGGGAGCTTAGTGGCGTATTCACGAATTTTCAGAACGCCAGTCCTCCAGT
GTGGTGCCCCCCGCCGCGTGTCTTGTTTTTACGCCCCCCGCCCCCTCCTC
TTGCATTGTTTGCGGAGGTCACGTTTTACGCAAGCTTTTCTTTGCCTTTG
AGACGGCAGCTGTTGTTTTTCTGTACTCCCTTGTCGTTGTGATATACTCC
ATATTCAATATTCAGCACTGATAATGCTGTTGCTGCAGCAACTCGGCAAA
CGGCCACGAAATTTTCCATTTTAGGCATAAAATGTAGGCTAGGATGAGAT
ATCTCCATTTTACCATCACATGTAGGTGTAGGTGATGAGCGATTCCGTGC
ATTCGACATGTTATTTATTTGTTGTACCCGCGGGTGACAATGCACATCCA
GGGTATGTACAGAGGAATTGAGGACTTTTCGTCTTCAAGAGTTTTTCACG
TGTACCAGGTAGCAGGGAGTTCGTCGCGAGAGTATATACCTACGGGAAAC
GTTTTTCGGGTGGGGAGGGTCTAGGTCTGTGCGGTTTTGTTATGCCGTGT
CTCGTACACAGCGTTGCAGAGCGCTTTTGCTTGTAGTCGAAATATTGAAC
TGTACCAGGCTTTTACACTAGGCAATTAATTGCACGTTGCAGTTGGGCGA
ATGTCAATGTCGGGTTGTAGTACGCTGGTCTGTACCACTAACCACGCAGT
AAGGCTTGGTATTGTGCAGCGCGAAGAAAGGGCGGCGGGGGTGAATACGA
GACTGATTCTG

Coding sequence (CDS) from alignment at Scaffold_235:273035..274945-

>EsuBft509_11a-0001 ID=EsuBft509_11a-0001|Name=EsuBft509_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=210bp|location=Sequence derived from alignment at Scaffold_235:273035..274945- (Ectocarpus subulatus male Bft15b)
ATGCTGGTCTCCCAGCACAATGTCTTCTTCATGAACGAGCTCATGACGTC
GATTCGGACGGCCATTGCCGAGGGCAGGCTGGCTGAGGAAGAGAATAAGT
GGCTCGCGCCGGGGCTACGGGCTAGGGATTTCCACAAGAGGGCGGCAGCG
GAGGCGGCGGCGGCGGCGGAAGCGGCTACAGGAGAGGAAAGCGGGGAAAC
CCATCACTAA