Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft499_22 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 133 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft499_22a-0001 ID=EsuBft499_22a-0001|Name=EsuBft499_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1333bp|location=Sequence derived from alignment at Scaffold_30:118235..123536+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GGGGGGGCGGCGCACATGGTACGGGAGCGAACGCCTTCGCGGACAGCAGA
AGGACAGTAGCGAGCGTGGGAGTTCCCCTTCCCGGGTCGGTGGCACCCGC
TGTGTTTTACGGAACACAGGGAACGGATGGCCGGGGAGGCACAAGCGTCG
AGGGGGAGCGGTTGGTCAACGCACTCACCTTCGGGTCTTTGGGAAGTGGT
ACCAACAAGGTGTATCAAAGGATGTGGAACACGTGGAAGGAGGCTCGTGC
AGGGGCGGGTTCGGGCCCGTGACTCCGCGAGTGCGATGGGGTGGAAAGTG
CGCTTCAGAAATCTGGGCGGACGACTCGGGGCTTTTGTACTCAGATTTCT
GTCTAACAAGAGGAGACCTGGGTTTCTTTTGCGGTCCGGTAAGGGTTGCA
TGGGCAGACCGGAGGCAGGCTAGCCGAGTGGAAGTCACGTTCAGAGCGTC
AAAGGCAGTTCAAAAACGTTTTGGAGCAACCGTCACTAGATCGGGAGAAG
CGTTGAAGGTGTTACTCGACATGTTAGATCTGCACCCCGAGCTTGGGAGT
CATGCGCCGTTGACGCAATCGTGGGCACAAGACAGGTGGAAGGTTATTTC
GAGGGCAGAGGCATCGAGACACCTCAGGTTACTCGCGAGTGCGGCGGGTA
GAGACCCACACAAGTATACGTTGCATTCAGGAAGGATTGGGGGGGCCACG
CACCTAGCAAGTTTGAGGGCGTCGGTAATCCAGATCCAGAGAGCCGGGAG
GTGGAAATCATCGGCTTTTATGGTGTACGTTATGGCGGGGGGTGAAGGAG
CAAAGTTTGTGTCTCAGGCCCTTACGGAACCCGAGGAGTGGCCAGGGAGC
GGTTCGGAGGAGTAGGTCATCGGACATGCTCAATGGAGTAAGATGTGTTT
AGGCCAGAGGCCGAAACAATAGTAATGATAGTAGGGCAATCTTGCGAAGT
TTGCAACGGGTTAGTCCGACAAGAAAACGTTGGGAACAAGACGGCATTTT
ACCTCCGCTCTCAATTTGTTTCATGTGTCTTGGTCTTTCTTTGGTTGCCT
GCAGAAAAAAACAATCCAGCATTCTTGAGCAAACATATACGAGAAGATTC
AGAACGTATTGGAATCTGTGGTTTGTGGAGGCGTGTTGGAATTCGGAAAA
GCGGGGATCGAAGAAAACTAGAGGCAGCCCTGGTGTCAGACAGTTTTTGT
GCTCTCGCTGGGCGAGAGACAAGCAAGTGCATTTGAGAGAAGGAGAGGAG
TAGCAGAGATGGCAGCTTTGAGGAGCAGCAAACACGGAGTGCCGCCTATG
ATTTGATCGATTTTCCCGCCCACCCACACCTAT back to topprotein sequence of EsuBft499_22a-0001 >EsuBft499_22 ID=EsuBft499_22|Name=EsuBft499_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=45bp
MGWKVRFRNLGGRLGAFVLRFLSNKRRPGFLLRSGKGCMGRPEAG back to topmRNA from alignment at Scaffold_30:118235..123536+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft499_22a-0001 ID=EsuBft499_22a-0001|Name=EsuBft499_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5302bp|location=Sequence derived from alignment at Scaffold_30:118235..123536+ (Ectocarpus subulatus male Bft15b)
GGGGGGGCGGCGCACATGGTACGGGAGCGAACGCCTTCGCGGACAGCAGA
AGGACAGTAGCGAGCGTGGGAGTTCCCCTTCCCGGGTCGGTGGCACCCGC
TGTGTTTTACGGTGAGAGCATGAGTTGTGAACCTGCAATTTCCCATACTG
TTAACTGTTTGAATTAGTTTTCGCCTTGCATGGTGGCGGACACCACTCAC
GCCGAAACGTCAAAAACAGTAGCTACGGGGGTAGACACCCTCGGCGCTAA
GTACGGGTCAAATAACAAGCAAGCGGAGGACACCGCACGGGTGATAGATA
AGTCAAAACTTTTGGCGGACACCAATTGTGCGAATACTGACACACACCGG
GCGGACACCCGGTGTGAACATGCATTTCCCTCACTCTCGCAAATGGTGGA
CGCCGGTCCCGCGAAAAACTCACTAACGGAATACCTATTCGCGGACACCA
ATAGCGGGATCAATTACTGCTCTGCCTTGTACACTACGAAGGCTGTGGCG
GACACCACACGTGCTGAACACTGCAATGCATATGCCTCGGGGGCTGACAG
GGTGAATGTAATTGGCCCCGCGGCACGCAAGCGGTGGACGCCGCGAGCGT
TGTCGGTAAACAAAAAATACTGGCGGACACCAGTAGTGTGAAGAAGGACA
TACACAGGCCGGACACCCTGTTTAAGAATTTGTCAGTCACACAGCCCCGA
TTGGCGTTTCCCATTCGCGGGAACGACACGGAATTGGCGGACACCATGAC
CGTGTCAAAAGCTCTCCCGGGGGCGGACACCCCGTGGGAAGCACTGTTCG
CACGTAGGGCACTAGCGGCGGACACTGCTAGGGCCGCTGACATCACAAAA
GTAATGCGACATGATTGCGGGTCGAATTCAGCGGGCGGGGAAAGAACCTT
CGGCCCTAGAGAGTCCAAAAAATACAACCTTGTTGAAAAATTCAAAAACT
CTGACCGATAGACTCGAGGTACAGAGAAGCATACTCGCGTCAACCATACA
CTCACTAGACGAGAAGCAATGTATCATTCGGAAAATGGCGGACATTGGTA
GTGATTTGGTAAAGCTCCACGATGGAAGGCTGGGAGACGTCGCGAGGGGA
ATCGGCGACACTCTGGTGTCACCGCCGTTGGACGTGAGCGACGTCAAGCA
GTATTTCGGAGAGGAGAAAGGCTTCCCGGGTATCGATGACCTCATTGAGA
TAGTCGGTGAAGGAGCCCCGGCCCCCACTCTAGACTCGCAGCAAAACCTT
AAGAAAGCCTTGGCATACGGCAACCATCGTAGCGTAAACGATCACCAAAC
ACAAGTGTGGGAAAAACTGTGCGACGATGTTAAGCGTAACAAGTGTATTG
TCCTGAGAAAGGCGAACGCGTCGGACGCACGTGGGATCAGAGCAGCCCCG
TTGGGAGCGGTCTCAGGAAAAAAAGCGAGGATCGTCAACGACTTCTCTTT
TGACCCAAGCACTAGCAAGGGGTTAAAAGGTGGACTCAACAAAGATACCA
TTATGTTTGGAGTTCCACGTTGCCATTGCGGCGAACCACTACCAGCTTTC
CTCGAGGAGCTCACTAGCCTACGAGTAAGATGGCCCGACAAGAGAATCCT
CGCAGCCAAGGCTGATGTCACCTCTGCGTTCAGAAATGTGAGGATATCAC
CAGATCATGCACACAAGTTTTGCTACGTGATAGGAGACGTGCTAGTAGCG
GATCTACGGCTGACCTTTGGCTGGGCAGCGTCACCAGGATTGTGGGGTGT
GTTAGCCTCCGCTGCAGAGCACTCGCACCGCAACACGTCCCTCGCGAACG
CTAGACTACTTCCAGAAGGAATCGCAATGATGTCCCACGTGAAAAAAAAA
CTCCTTGGGAAAAAGGCACCCCAACGCCCATACCATTGTCGGCAGGCGTA
AGACCGCATAGAAGCGGGGGACCCGCGGACGATTTCTTGGCCAGGGTCTA
CATTGACGATTTCTTGCTCACGAAGGTACAGCATGACCCCACTGACCAAT
CGGCACTCATTGCTTCCGTCTCGCTAGCGTCGGACCATGTCAGACTGTTT
GGCAGGGGAGAAGTCGGAGAAACTCCCATTCTCGCCCCGAAAAAGAGCAC
TGACTGGGACACGGTCATAGAGGCCCTGGGGTACATCATAGACACGCATG
ATGGCAGAATTGCAACTACACCCGAACGGGTAAGCGCGATTCGGAACATA
CTAGAGGCAAATTGGCCCCACGATAGGAAGAAGGCCAGCGTTCAAGAAGT
CCTCAGCATTGCAGGAAAACTGTGGAACCTCACTTACGTTATCAGGGCTG
GTAGGTACTTCGTGTGGCGACTGCTCCGCCTATCGGGTCTGCATACGCAA
GCCAGTCGACACACACGGTCACGACGACTAGTGGACTTGGGTAGAGAGTT
CCACGGCGATATCGCCTTCTGGAAGTGGGCCCTCAATCAGCCACTGGCAC
TTCGAGGGGAGTCCCTCAGCGCATCGTTCCTACTCTACGTAAAGCGAGCA
CCTTCACGCCTTTACCTCTCAGACGCTAGCTTCACAGCGATTGGCGGCTA
CTGTCCCGAACTAAAAACTTTCTGGAGATACACGATCGAATCATCGTTGT
CTGCANGTCCTCAGCATTGCAGGAAAACTGTGGAACCTCACTTACGTTAT
CAGGGCTGGTAGGTACTTCGTGTGGCGACTGCTCCGCCTATCGGGTCTGC
ATACGCAAGCCAGTCGACACACACGGTCACGACGACTAGTGGACTTGGGT
AGAGAGTTCCACGGCGATATCGCCTTCTGGAAGTGGGCCCTCAATCAGCC
ACTGGCACTTCGAGGGGAGTCCCTCAGCGCATCGTTCCTACTCTACGTAA
AGCGAGCACCTTCACGCCTTTACCTCTCAGACGCTAGCTTCACAGCGATT
GGCGGCTACTGTCCCGAACTAAAAACTTTCTGGAGATACACGATCGAATC
ATCGTTGTCTGCAGAGCTCAAGCGCAAGGCGCAAGAGAAGGAGACGGCAG
ACATTACGATCAATCTGTTTGAACTCGCGGGCATGTTCATGACGGCGTGG
GTAGTCCAAATGATCTTGAAAGACAGACCTATACAAGAAGGACAGTCGGT
GTTGATGCGTGGAGACAACGTGTCGGCCGTCAGTTGGACCAGCAGGTGTG
GAGGATCGCGGGACAGGCGCGCGAGCCTCAAAATGAGACTCATGGGTAGG
ATGGAAATTTCTTGCGGCTGGTGCCACGTGGCCAAGCACATCCCTGGTCG
AAAGAACACACTCGCGGACGGGATCTCACGTTGGGAAGTCAACGAGATCG
CCGCCAATGTAAAAATGATCACGAAAGACTCAGGGTGGACACAGCAGGAT
ATTGGAGAAGGGCGACGAGCGTTGCTTAGCATTATCCTACAAAAGAAATT
GCCAAAAGAGAGTCTGGACGACTCGGTATGGGACATGATGGTCCAAGGAA
CAGAAAACATGGCAGCGGGGGCGGTTGGACACCGCTCTGTGTTCCGGACG
ATCAACGAATTATCAAACGAAATGAGATAGCGAGAAGCTGGAGCGGTGGA
CACGCCTCACATTCACTGTTTCATGACGCCTTGATGAAATGGATAGCCGG
AGGAGGCAGAGTTGGTTTGGACGACCAAGTTTTCCTGTTCTCCCCTCAAG
CCAAGTCGGGGCTATCCATGGGTTCGGCAGGAACCTGTCGTACCTTAGAA
AGGAACCTCGAAATGTGCGCATTCCTCGCGCTATGTATACCCGATGATTG
TATATCAGGAACACAGGGAACGGATGGCCGGGGAGGCACAAGCGTCGAGG
GGGAGCGGTTGGTCAACGCACTCACCTTCGGGTCTTTGGGAAGTGGTACC
AACAAGGTGTATCAAAGGATGTGGAACACGTGGAAGGAGGCTCGTGCAGG
GGCGGGTTCGGGCCCGTGACTCCGCGAGTGCGATGGGGTGGAAAGTGCGG
TGCGTGAGCTGTCGGTGTCAATGGCTTGCCGGTGTTTCGGTCACAAGAAC
CAGAGTCAGACTATCCGCGGGTATCTCTCAGCCATCAAGTACTTCCATAA
GATGCACGCAGGTTGGGAGTTGCCCGCTGCGCATTTCCAGATCCTTGCCA
TGCTGAAGACCATTGATAGGGTCCACGTCAATACGCAGACGAAGCCTAAG
GTTAGGAATCCACTCACATGCAACATGCTAGAGGCTGGAAAGTGCGTGGT
CGAAAATTCGGGAGAATCAGGGAAGTTGATCTGGTGCGGACTTGCCCTCT
CGTACTTGCTGACGTGCCGAGCTTCAGAAATCTGGGCGGACGACTCGGGG
CTTTTGTACTCAGATTTCTGTCTAACAAGAGGAGACCTGGGTTTCTTTTG
CGGTCCGGTAAGGGTTGCATGGGCAGACCGGAGGCAGGCTAGCCGAGTGG
AAGTCACGTTCAGAGCGTCAAAGGCAGTTCAAAAACGTTTTGGAGCAACC
GTCACTAGATCGGGAGAAGCGTTGAAGGTGTTACTCGACATGTTAGATCT
GCACCCCGAGCTTGGGAGTCATGCGCCGTTGACGCAATCGTGGGCACAAG
ACAGGTGGAAGGTTATTTCGAGGGCAGAGGCATCGAGACACCTCAGGTTA
CTCGCGAGTGCGGCGGGTAGAGACCCACACAAGTATACGTTGCATTCAGG
AAGGATTGGGGGGGCCACGCACCTAGCAAGTTTGAGGGCGTCGGTAATCC
AGATCCAGAGAGCCGGGAGGTGGAAATCATCGGCTTTTATGGTGTACGTT
ATGGCGGGGGGTGAAGGAGCAAAGTTTGTGTCTCAGGCCCTTACGGAACC
CGAGGAGTGGCCAGGGAGCGGTTCGGAGGAGTAGGTCATCGGACATGCTC
AATGGAGTAAGATGTGTTTAGGCCAGAGGCCGAAACAATAGTAATGATAG
TAGGGCAATCTTGCGAAGTTTGCAACGGGTTAGTCCGACAAGAAAACGTT
GGGAACAAGACGGCATTTTACCTCCGCTCTCAATTTGTTTCATGTGTCTT
GGTCTTTCTTTGGTTGCCTGCAGAAAAAAACAATCCAGCATTCTTGAGCA
AACATATACGAGAAGATTCAGAACGTATTGGAATCTGTGGTTTGTGGAGG
CGTGTTGGAATTCGGAAAAGCGGGGATCGAAGAAAACTAGAGGCAGCCCT
GGTGTCAGACAGTTTTTGTGCTCTCGCTGGGCGAGAGACAAGCAAGTGCA
TTTGAGAGAAGGAGAGGAGTAGCAGAGATGGCAGCTTTGAGGAGCAGCAA
ACACGGAGTGCCGCCTATGATTTGATCGATTTTCCCGCCCACCCACACCT
AT back to topCoding sequence (CDS) from alignment at Scaffold_30:118235..123536+ >EsuBft499_22a-0001 ID=EsuBft499_22a-0001|Name=EsuBft499_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=138bp|location=Sequence derived from alignment at Scaffold_30:118235..123536+ (Ectocarpus subulatus male Bft15b)
ATGGGGTGGAAAGTGCGCTTCAGAAATCTGGGCGGACGACTCGGGGCTTT
TGTACTCAGATTTCTGTCTAACAAGAGGAGACCTGGGTTTCTTTTGCGGT
CCGGTAAGGGTTGCATGGGCAGACCGGAGGCAGGCTAG back to top
|