Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FUL1 |
| ProteomeId | EsuBft499_16 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 188 |
| Hectar predicted targeting category | other localisation |
| Evalue | 7.54e-247 |
| EggNOG OGs | 2CY24@1|root,2S1EB@2759|Eukaryota |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-13_004040.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Glycosyl transferases group 1 |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft499_16a-0001 ID=EsuBft499_16a-0001|Name=EsuBft499_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1887bp|location=Sequence derived from alignment at Scaffold_30:166014..171407- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCTCCGGCCTCTCGAGGACGCGTGCTCAATGTTCCAACAGCTAAGCCA
CGCAACGCATGACCCCCCCCCCCAAAAAAAAGACATTCGCTCGTCGTCGG
CGCGGCACACGCGTGTGCAGGTTGTCATATCCACGACGGAGACGCTCCAG
CGAAGCTTGAGCATGGTCAACAACCGCGTGTTCGAGGCTCTCTCCTGTGG
GGCCGCTGTGGTGCACCTGCTCGGGAACGACACCGCACGAACCGACCTGG
GCAGGAGGGGCCGGGAGCTCGTCCTGTCCAAGCACACCTTCGCGTCACGC
GTGGTGACGATTCTCTCGAGCATGGACGAAGTGGTAGCGCTGAAAAACCA
GGAGGAGACATCAGCAGCGGGAGAAGCTTCGTCGGCAGCAGCCCGGCGCC
TGGCCTTGCTACCGGGCGAGACGACGGCAGCGGCCACGGCGCGGGGTGAT
CTTCCCGCGAGGGGTGCCGCCGGCGCTGATGCTATCGCCGCCGCCGTGAA
TGCCACCGCTATGCCGACGGGGGGTGGCGGTGTCGAAAGCTGTTGCCAAT
CGGGTAGAGCTTGTCGCAACGCCGTCGAGTTCACGGCATGCCCTACACCG
ACTACGGCACCTGGAGAGGGTGGGGAAAACTTGACGACAACCGTGCCCTC
GTGCCCTGCAGAGGGAACGCCCCCTGGTGAAGATGCTGCTACGGAGGAGT
TACGACAACTATCACGCCCCCATCACGATCCCTTTCCACCGTCGCCATCG
CTAAGGGCGGCGACTCCGGTCCGGGCGCACCAACGACCGGACCACGCTCA
ACCCCTCGTGCACGGTGCCGGCGAACACGCCACCGGCAGCGGGGACATCT
CCAGGGATGATGCCACACAAGGAACACCCTGTAACGGTTCCGGGGATCAT
TCGACAAAAAGGAGGTTCTGTTACGGCTCTAAGGATGACACGACAAGCGG
CGCATGCCATTACGGTTCCAGCGATACCTCGACAACAGGAACACCGTGCA
ACGGCGGTTCCGGGGATGGTACGAAGAGAGCAACATCCCGTAACGACTCA
GGCAACCCCGACTATCCTTTGCCCCAGCTGCTGGGGCGAAAGAAGACGCC
GCTGGTGGTGCGGCCGAACGCTCCGCTGGTCCTTGTCGTGTACCGATCGG
AGTCCCCACCCCCTGGGCAATTGCGGCGGGACCTCCAGTCCGCGGCCGGA
GCCGTGGCCGGCGGCGCCAGAATAGCGTTCATGGAGACAACAGCCGAGAC
CCTCGGCGTCAGTGATTCGGGCGTCGAGTGCTTCGGATGGGGGCGACGGA
TTGGGGCAGAGGAACTCTCTCGGCTGCAGGACCTGCAGACCCGCGTCTCC
CGGCTGCTGGCGGATGCAGGCCGAGCGGCCGCCCACGGAGAGCACGGAAA
TACGCTGGACGTGGACTTTCTTGGCGTGGAGGCTGCCCGCGAGGCGCACG
GCTTCATGGAGTGGTGCTGCTCCGTGGGAGACCCTTTGGAGAGGTGGTTT
CTCCACCGTCTCGTCGGCGAACACGCTTCGCGCGTCGTGCGCACGGCGTT
TCTCGCTGTCGCCGCCGGTGGCCCTGAGAGTGCGGAACAACAACACGGTT
TTGGGAGACAAGAACACGAGATCGCGAGACGACGGCACGGGATGGCAGGA
CAACACGGCAAAGCTCTGACGTTTTTGGAGGCTCAACGACTGGACTGTTA
CGAGTGGGTTGAGCACCTTGGCGGCTGCGGCGAGGGCCGCTCGTGCCCTA
GGTCGGTCCTTTCAGAGGGAGGCTACTTCGCGGAAGAAACGGGAGGCAAG
ACTTGCCCTTCTGCCTCCAGGCTCAAGAACAAGGTCGAGCAGACCTTGTT
TGGGGTGAGGAAGCGCTTCCACGATGCCGTTGGTTAG back to topprotein sequence of EsuBft499_16a-0001 >EsuBft499_16 ID=EsuBft499_16|Name=EsuBft499_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=628bp
MLRPLEDACSMFQQLSHATHDPPPQKKDIRSSSARHTRVQVVISTTETLQ
RSLSMVNNRVFEALSCGAAVVHLLGNDTARTDLGRRGRELVLSKHTFASR
VVTILSSMDEVVALKNQEETSAAGEASSAAARRLALLPGETTAAATARGD
LPARGAAGADAIAAAVNATAMPTGGGGVESCCQSGRACRNAVEFTACPTP
TTAPGEGGENLTTTVPSCPAEGTPPGEDAATEELRQLSRPHHDPFPPSPS
LRAATPVRAHQRPDHAQPLVHGAGEHATGSGDISRDDATQGTPCNGSGDH
STKRRFCYGSKDDTTSGACHYGSSDTSTTGTPCNGGSGDGTKRATSRNDS
GNPDYPLPQLLGRKKTPLVVRPNAPLVLVVYRSESPPPGQLRRDLQSAAG
AVAGGARIAFMETTAETLGVSDSGVECFGWGRRIGAEELSRLQDLQTRVS
RLLADAGRAAAHGEHGNTLDVDFLGVEAAREAHGFMEWCCSVGDPLERWF
LHRLVGEHASRVVRTAFLAVAAGGPESAEQQHGFGRQEHEIARRRHGMAG
QHGKALTFLEAQRLDCYEWVEHLGGCGEGRSCPRSVLSEGGYFAEETGGK
TCPSASRLKNKVEQTLFGVRKRFHDAVG back to topmRNA from alignment at Scaffold_30:166014..171407- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft499_16a-0001 ID=EsuBft499_16a-0001|Name=EsuBft499_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5394bp|location=Sequence derived from alignment at Scaffold_30:166014..171407- (Ectocarpus subulatus male Bft15b)
ATGCTCCGGCCTCTCGAGGACGCGTGCTCAATGTTCCAACAGCTAAGCCA
CGCAACGCATGACCCCCCCCCCCAAAAAAAAGACATTCGCTCGTCGTCGG
CGCGGCACACGCGTGTGCAGGTTGTCATATCCACGACGGAGACGCTCCAG
CGAAGCTTGAGCATGGTCAACAACCGCGTGTTCGAGGCTCTCTCCTGTGG
GGCCGCTGTGGTGGTGCGTACAGTATGCGTACGAAAAAAAGAAGCGAGCC
AGGGAGAACAATCCAGATGGCGGCGAAGTGGATCCCTCTCGGATATATTT
CATACATTTTCAGCAAAATCTTGGGACATCATCTGTCCCGCTACGTAAGG
CAGCAGCATTGTCGTTGAACGCGCGCGGAGAAAACTTTTATTGACGGCGG
TATCAAGCGCGTGGTTTTTCATACGCCGAACGCGTGGCGGTATCAATCAA
TATGGAATTTCTTTTTTGGTTTATCGCCTTCTCAACGGTGTGTGGTAGCC
TGCATGGAGGGCCCACACAGGCCGCACACGTTTCACCTACAGTAAGACGT
TCCGCTGCTCTCGCTCGCGGTTCTTACCCATGTTATTGCCTCTGGAACCC
ATTTTGATGCGTCCGTGGTGTCCCTCGCGCTTTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTCTCTCTCAATCCT
ACCTTCTCGCGCGGTGTTTTTCTCGCGAAAGAGCGACGCCTTTCCAGCGG
CGGAGGAAATGTTCGGCGACCACGTGCTTTTCTACCGACAGCCTGGCGAC
GCGGCGCGGGCGGTGAAGGTGTGACTCTTGCTCGATCTCCGAACCTTAGC
ATTTGTTGGAAAGCACGATACCCACAGGACTTCTACTGACTACCAGTAGC
CCAGTGGTCATCGCGCTTTATTGCAGCTCTAACCAACACCTGGGTTGATT
GATTCGTACAGGGGGGCACGCAGATGGGCATGGTACTTGGGAAGGGCCAG
ATGGTGATTAGCCGCCCTTGTGCCCGGCGCCTGGCCGAGGGCATCAGTGT
CTCGGGTGGCATAGACAATGATGTTAGGATGTGTTGGTGCCCAAAGAATC
GTTCCCCACAACGATACGTGTCGGTGCCCCGCCAACAAGAGCCATGCTCG
TTGGGGTTTTCCGCCCCGAAAGGTTGTACCCGGCGCAGACGGGAAATCGA
AGCAGAGACAGCGAAAGCTGCCAACAACCAAGACGTACGAGCTCCGAAAT
CCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCCCCCCCCCCCCGTTCTGGCATCCCCCTGAGATCGCCCCCCCGCCTCGA
CTTGCCTGCCGCAACAGCACCTGCTCGGGAACGACACCGCACGAACCGAC
CTGGGCAGGAGGGGCCGGGAGCTCGTCCTGTCCAAGCACACCTTCGCGTC
ACGCGTGGTGACGATTCTCTCGAGCATGGACGAAGTGGTAGCGCTGAAAA
ACCAGGAGGAGACATCAGCAGCGGGAGAAGCTTCGTCGGCAGCAGCCCGG
CGCCTGGCCTTGCTACCGGGCGAGACGACGGCAGCGGCCACGGCGCGGGG
TGATCTTCCCGCGAGGGGTGCCGCCGGCGCTGATGCTATCGCCGCCGCCG
TGAATGCCACCGCTATGCCGACGGGGGGTGGCGGTGTCGAAAGCTGTTGC
CAATCGGGTAGAGCTTGTCGCAACGCCGTCGAGTTCACGGCATGCCCTAC
ACCGACTACGGCACCTGGAGAGGGTGGGGAAAACTTGACGACAACCGTGC
CCTCGTGCCCTGCAGAGGGAACGCCCCCTGGTGAAGATGCTGCTACGGAG
GAGTTACGACAACTATCACGCCCCCATCACGATCCCTTTCCACCGTCGCC
ATCGCTAAGGGCGGCGACTCCGGTCCGGGCGCACCAACGACCGGACCACG
CTCAACCCCTCGTGCACGGTGCCGGCGAACACGCCACCGGCAGCGGGGAC
ATCTCCAGGGATGATGCCACACAAGGAACACCCTGTAACGGTTCCGGGGA
TCATTCGACAAAAAGGAGGTTCTGTTACGGCTCTAAGGATGACACGACAA
GCGGCGCATGCCATTACGGTTCCAGCGATACCTCGACAACAGGAACACCG
TGCAACGGCGGTTCCGGGGATGGTACGAAGAGAGCAACATCCCGTAACGA
CTCAGGCAACCCCGACTATCCTTTGCCCCAGCTGCTGGGGCGAAAGAAGA
CGCCGCTGGTGGTGCGGCCGAACGCTCCGCTGGTCCTTGTCGTGTACCGA
TCGGAGTCCCCACCCCCTGGGCAATTGCGGCGGGACCTCCAGTCCGCGGC
CGGAGCCGTGGCCGGCGGCGCCAGAATAGCGTTCATGGAGACAACAGCCG
AGACCCTCGGCGTCAGTGATTCGGGCGTCGAGTGCTTCGGATGGGGGCGA
CGGATTGGGGCAGAGGAACTCTCTCGGCTGCAGGACCTGCAGACCCGCGT
CTCCCGGCTGCTGGCGGATGCAGGCCGAGGTGAACCACGAAAAAATCGCC
CCGTCCCGGTAGAGATGGACATGTAGGGACGGTCGGTTGCCTTCCCTATC
CTTACGTCCTCGTCTGGTCATCTTTTCTACTTTTTCTTTTCTCGGGTGCG
TGGAGAATCCTTGGGCGTATTACCAAGAGAAACCGATCCATGAACCTAGC
ACATGGACGACGAAGAACTAGAGTTCTGACGAGGTAGCCTTAAGGTATCC
CTTGCTTGGGCCGGTCACCAAGAGAAACCGACCCATGACACTAGCACATC
GACGAAAAAGAATTAGAACTCTGACGAGGTAATCATAAGATACCCCTTGC
TTGGGTGGGACACCAAGAGAAACCGAAACAGAAAACTATCACATCGACGA
AGAGCTAGAGCTCTAGCGAGGTAGCCATCAGAATACCCTTTCTCGGGCGG
AATACCAAGACGAACGAACATGAAGCTAACACACCGAAGAACTAAATAGG
GCTCTAGCAAGGTAGCCCAAAGAAAAGATGGCTTGGGCGGTATTTCAAGC
GAAACGAGCATGAAGCCAACACATCGACGAAGAGGTAGCCATGAGTCCGG
GGCGCCAGTACCCTACTCCGAGGAGACGACCGGCCTCGCTGTCCACCCGT
TTAATGTGCTGTCTAAGGCAGAACACGACCGACGGCCAACCACTGGTACC
ACAGAGTGCTTCGATCCATGTGTCTTAGCCAGCGACCAGACTCGTACTTC
ATTGAGGGATGAGTGATGTTGAACATGAAAAGACAAAAATCCCCATGTCA
TCAATGAGCCCGGAAAAGAAAGAGCAATAGTGGAGAAACATGAAATTTTT
CAAAGTCACACGCCGCGCCCCGCGCGCTCCCGAACCCTTACCTCCACACG
ACATCTTGCACGGCGCAGCGGCCGCCCACGGAGAGCACGGAAATACGCTG
GACGTGGACTTTCTTGGCGTGGAGGCTGCCCGCGAGGCGCACGGCTTCAT
GGAGTGGTGCTGCTCCGTAAGCATGCTCATCGTGTATTCGAATGTGAGGA
TGCCGGTGCCATATAAAGTTTCTGTTTCGTGGTTCGTGTATGCATCTGTT
GTGGGGATGGCGACTGCTATAAAAGGTTTCAATATTGTTTTGGACCCTGT
CAGGACCGCAGGCAGGAGCCTCTTTCCCCATGTCCCGGTTTTCGTGGGTG
GTTCCGTGCCTCTCGTTTGGTATGTGTGTAGGTGTGGGAAAGCAGGGCTC
CCCTCGTCAGCATGTACTCGGACACTCCTCTTCGTAGAGCTCACTTCGAC
CGGGAGGAGCTGTTATTGGTGCCTTTGTCACTCAAGTGGGGCGGCCCAGT
TTACCGACCCCTGAAGTAGTGTCAAGACGAAATGTAGCCGCCATTCAGGG
CAGGTCGCTAAACCGAACTACCAATTACTTTAGTATTACGAAGTAGCAGT
TAGTGCGGCGGTGCAACGTAGTTTGTTTGGTGGTCGCTAAACAGGGTATG
TCGCGAAGCAGGGGGTCACGAAACTGCCCCCCCTATTGTACTGCGCGCTA
ACATATTTTTCTTGTTGTACGCCAAGGCCACTCCGTAGGTTTCGTTACGC
GCCGCGTTTCGGCTATGTTTCGACTCATCTTTCGGTGCTAAACGATCGGA
CATGCACACTGGCAGAAATCCAGCAGGTGTTGAAAACCAATCTCTTGAAA
CAAATTTCCGCCCGAAACAGGTGGGAGACCCTTTGGAGAGGTGGTTTCTC
CACCGTCTCGTCGGCGAACACGCTTCGCGCGTCGTGCGCACGGCGTTTCT
CGCTGTCGCCGCCGGTGGCCCTGAGAGTGCGGAACAACAACACGGTTTTG
GGAGACAAGAACACGAGATCGCGAGACGACGGCACGGGATGGCAGGACAA
CACGGCAAAGCTCTGACGTTTTTGGAGGCTCAACGACTGGACTGTTACGA
GTGGGTTGAGCACCTTGGCGGCTGCGGCGAGGTGAGATGAGGTGAGACGC
TGCGATAGTAGCCGAAACACGTCGTCTTCGAGCGGCGTTTTCTTGGCAAG
AAAGAGAGTGAGATCCCGAAGTTAACTCAAGGGTCGAGGTTTCTCAAGGT
CGAACGAGCGCGAAGTTTGGGGTTTGATGTGTTTCTTGGGAATGATCGCG
ACGTACTTTGCCGAGAGTTTTATGTGGCACGAACACGCGTGGTTGCCAAT
ACCTCTCAATCAGTACCAGGACTGAGAGCAAAAGGCCACCATGCATCAAT
GTCCGCTAGAGGCAGAAAAATCCAGAAACCATACCCAGGACGTGCTACAC
GCACCGGGTGGCGCGATCTGGTTGAGCGCTTGAGGCACCGCCGTTTGTTC
CTGTCGAGCCCTCGGAAGCCTTGCGTGGAAACCAGACTCGGCCCCTCCAA
CGAGATAGAGCCCCGTCATGTCAACATACGCGAAGGACGTTGTTCCACGG
TCAGGTAGAACACCGGTTCAAGGCGCTTCACGTAGCGGTAGCCGTGCGAG
CACGAACCGTTGCCTCGCCCGAAGCAATGCACGAAACGAGTCATCATGCG
TGCGTTGCCTTGCGAGCCGCCCGACAGAGATCGACATGACCGTGCCTGCC
GAAACGCCTCCCCCTAAAAAACAAATACTTCGCAACGGCAGGGCCGCTCG
TGCCCTAGGTCGGTCCTTTCAGAGGGAGGCTACTTCGCGGAAGAAACGGG
AGGCAAGACTTGCCCTTCTGCCTCCAGGCTCAAGAACAAGGTCGAGCAGA
CCTTGTTTGGGGTGAGGAAGCGCTTCCACGATGCCGTTGGTTAG back to topCoding sequence (CDS) from alignment at Scaffold_30:166014..171407- >EsuBft499_16a-0001 ID=EsuBft499_16a-0001|Name=EsuBft499_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1887bp|location=Sequence derived from alignment at Scaffold_30:166014..171407- (Ectocarpus subulatus male Bft15b)
ATGCTCCGGCCTCTCGAGGACGCGTGCTCAATGTTCCAACAGCTAAGCCA
CGCAACGCATGACCCCCCCCCCCAAAAAAAAGACATTCGCTCGTCGTCGG
CGCGGCACACGCGTGTGCAGGTTGTCATATCCACGACGGAGACGCTCCAG
CGAAGCTTGAGCATGGTCAACAACCGCGTGTTCGAGGCTCTCTCCTGTGG
GGCCGCTGTGGTGCACCTGCTCGGGAACGACACCGCACGAACCGACCTGG
GCAGGAGGGGCCGGGAGCTCGTCCTGTCCAAGCACACCTTCGCGTCACGC
GTGGTGACGATTCTCTCGAGCATGGACGAAGTGGTAGCGCTGAAAAACCA
GGAGGAGACATCAGCAGCGGGAGAAGCTTCGTCGGCAGCAGCCCGGCGCC
TGGCCTTGCTACCGGGCGAGACGACGGCAGCGGCCACGGCGCGGGGTGAT
CTTCCCGCGAGGGGTGCCGCCGGCGCTGATGCTATCGCCGCCGCCGTGAA
TGCCACCGCTATGCCGACGGGGGGTGGCGGTGTCGAAAGCTGTTGCCAAT
CGGGTAGAGCTTGTCGCAACGCCGTCGAGTTCACGGCATGCCCTACACCG
ACTACGGCACCTGGAGAGGGTGGGGAAAACTTGACGACAACCGTGCCCTC
GTGCCCTGCAGAGGGAACGCCCCCTGGTGAAGATGCTGCTACGGAGGAGT
TACGACAACTATCACGCCCCCATCACGATCCCTTTCCACCGTCGCCATCG
CTAAGGGCGGCGACTCCGGTCCGGGCGCACCAACGACCGGACCACGCTCA
ACCCCTCGTGCACGGTGCCGGCGAACACGCCACCGGCAGCGGGGACATCT
CCAGGGATGATGCCACACAAGGAACACCCTGTAACGGTTCCGGGGATCAT
TCGACAAAAAGGAGGTTCTGTTACGGCTCTAAGGATGACACGACAAGCGG
CGCATGCCATTACGGTTCCAGCGATACCTCGACAACAGGAACACCGTGCA
ACGGCGGTTCCGGGGATGGTACGAAGAGAGCAACATCCCGTAACGACTCA
GGCAACCCCGACTATCCTTTGCCCCAGCTGCTGGGGCGAAAGAAGACGCC
GCTGGTGGTGCGGCCGAACGCTCCGCTGGTCCTTGTCGTGTACCGATCGG
AGTCCCCACCCCCTGGGCAATTGCGGCGGGACCTCCAGTCCGCGGCCGGA
GCCGTGGCCGGCGGCGCCAGAATAGCGTTCATGGAGACAACAGCCGAGAC
CCTCGGCGTCAGTGATTCGGGCGTCGAGTGCTTCGGATGGGGGCGACGGA
TTGGGGCAGAGGAACTCTCTCGGCTGCAGGACCTGCAGACCCGCGTCTCC
CGGCTGCTGGCGGATGCAGGCCGAGCGGCCGCCCACGGAGAGCACGGAAA
TACGCTGGACGTGGACTTTCTTGGCGTGGAGGCTGCCCGCGAGGCGCACG
GCTTCATGGAGTGGTGCTGCTCCGTGGGAGACCCTTTGGAGAGGTGGTTT
CTCCACCGTCTCGTCGGCGAACACGCTTCGCGCGTCGTGCGCACGGCGTT
TCTCGCTGTCGCCGCCGGTGGCCCTGAGAGTGCGGAACAACAACACGGTT
TTGGGAGACAAGAACACGAGATCGCGAGACGACGGCACGGGATGGCAGGA
CAACACGGCAAAGCTCTGACGTTTTTGGAGGCTCAACGACTGGACTGTTA
CGAGTGGGTTGAGCACCTTGGCGGCTGCGGCGAGGGCCGCTCGTGCCCTA
GGTCGGTCCTTTCAGAGGGAGGCTACTTCGCGGAAGAAACGGGAGGCAAG
ACTTGCCCTTCTGCCTCCAGGCTCAAGAACAAGGTCGAGCAGACCTTGTT
TGGGGTGAGGAAGCGCTTCCACGATGCCGTTGGTTAG back to top
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