EsuBft499_13a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	EsuBft499_13a-0001
Unique Name	EsuBft499_13a-0001
Type	mRNA
Organism	Ectocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_30:211953..213572-
coding sequence from alignment at Scaffold_30:211953..213572-

spliced messenger RNA

>EsuBft499_13a-0001 ID=EsuBft499_13a-0001|Name=EsuBft499_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1396bp|location=Sequence derived from alignment at Scaffold_30:211953..213572- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGAGGGAAGAGACGCCCCAGGGAGCTCTTCGTGAGCAAAAGACCAT
ACACGACCCTGAACCATGTGTACAGCCGTCAGAGCGCCTCAAGTCCCTGA
CGTCGACCAAGATCTTTAGAGGTGAAAACCTCCAAAACGCCCTCCATGAG
ATGCTCCAAACCGCAAAGTCCTTAACCGAGAAAGGACCAACTATCAACCA
AACGTTCGTCCTTCACCTCTTCCTGGATGCCCTTTCGGACGAGTATGCCA
TGACAATGCACAACCTGCGACACGCGAAGGAGTTGACGCGGACCGGTGTG
CTAAAGGAAGTAATGATCGAATCCAAGGCAATCAAGGACAAGCTGGAGCA
GGGGAAAGGAAAAGGGGCGAAGGGCGCAGAGCAAGCGTACTTCGCCCACG
GTGAGGGCCGCAGGGAGCGGTACTCAAGTAGGAGTCAGGGGCAAGGTCGT
GGTCGTGGCGGGGGCCGTGGCCGCAGCAGCAGTCGTGGCCGCGGCGGAGG
CGGTCGCGGCGGCGGCGGCGGCGGGGGTCGCGGCGGCCGCTCAGGCGGAT
CCGGAGGAGTCGAGGAGAGCAAGGGAAGCAGCAGTGGAGGCGCCGATGGC
GGCGGTGGCGGGGACTATGAGTTCCCGGGCCGGTCCTTTAGGTGTGGACA
TCGTAGACATCAAGCGATCGGCTGCACTACCAACGAGAAGGACTTCCTGC
CGTGGTGTGCGCGCTGCGAGGGGTGGGGCCACACCAAAGAAATGTGCGCG
ACGGAGGAGGCCGTCCTAGCGCAAGTGGTGGAGCATGAGAGCGACGTGGA
CTCCGTGGAAGACCAGGCGTTTTGTGCCGTGGCAGTCCCCCCAGGCGAGT
GTGGTACCGTTGGTGAAGTAGGTCTAGTGGGGGATGTGGAACAAGGCCAG
GCGGTGTACGTGGCCGACACAGCGGCCACGTGCTCCATGTTCCGATGTGC
AGACAACTTCGTGAACTACCGTGAGCGTAGCGGTTGGGTGAAGGGGATCG
GAGGCGACAAGGCCCCCGTTCCTCTTCTAGGATACGGAGATGTGACCTTA
GTCCTACAGACGGAAGATGGTGGAGTACCCGTACCAGTACTGAATGCTGC
CCATGTACCAGAGGCCCCCTACAACCTCCTCTCGCTGTCTTCGTTGGCGG
AGGAGGGCCACACGTATTCGGGGATGAAGGGGGGCCTCACGCTGACCACG
AAAGCCGGGGGGGAGGTGTGGTTCCCCCGGACTGGAAAGCTGCTGACCCA
ACGAGGCTATCAAATAAAGCCAACGCTACACACCGCCTGTGCCGCACTCA
TTGTTCCTGGCGATGCGAAAGCAGCCAACCCCACTGACCTCAACGAGGAG
TGCAGCTGACGGATGGACCGCTGCTACCCTGTCTTGGCTGTTCGAT

protein sequence of EsuBft499_13a-0001

>EsuBft499_13 ID=EsuBft499_13|Name=EsuBft499_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=452bp
MKREETPQGALREQKTIHDPEPCVQPSERLKSLTSTKIFRGENLQNALHE
MLQTAKSLTEKGPTINQTFVLHLFLDALSDEYAMTMHNLRHAKELTRTGV
LKEVMIESKAIKDKLEQGKGKGAKGAEQAYFAHGEGRRERYSSRSQGQGR
GRGGGRGRSSSRGRGGGGRGGGGGGGRGGRSGGSGGVEESKGSSSGGADG
GGGGDYEFPGRSFRCGHRRHQAIGCTTNEKDFLPWCARCEGWGHTKEMCA
TEEAVLAQVVEHESDVDSVEDQAFCAVAVPPGECGTVGEVGLVGDVEQGQ
AVYVADTAATCSMFRCADNFVNYRERSGWVKGIGGDKAPVPLLGYGDVTL
VLQTEDGGVPVPVLNAAHVPEAPYNLLSLSSLAEEGHTYSGMKGGLTLTT
KAGGEVWFPRTGKLLTQRGYQIKPTLHTACAALIVPGDAKAANPTDLNEE
CS

mRNA from alignment at Scaffold_30:211953..213572-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft499_13a-0001 ID=EsuBft499_13a-0001|Name=EsuBft499_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1620bp|location=Sequence derived from alignment at Scaffold_30:211953..213572- (Ectocarpus subulatus male Bft15b)
ATGAAGAGGGAAGAGACGCCCCAGGGAGCTCTTCGTGAGCAAAAGACCAT
ACACGACCCTGAACCATGTGTACAGCCGTCAGAGCGCCTCAAGTCCCTGA
CGTCGACCAAGATCTTTAGAGGTGAAAACCTCCAAAACGCCCTCCATGAG
ATGCTCCAAACCGCAAAGTCCTTAACCGAGAAAGGACCAACTATCAACCA
AACGTTCGTCCTTCACCTCTTCCTGGATGCCCTTTCGGACGAGTATGCCA
TGACAATGCACAACCTGCGACACGCGAAGGAGTTGACGCGGACCGGTGTG
CTAAAGGAAGTAATGATCGAATCCAAGGCAATCAAGGACAAGCTGGAGCA
GGGGAAAGGAAAAGGGGCGAAGGGCGCAGAGCAAGCGTACTTCGCCCACG
GTGAGGGCCGCAGGGAGCGGTACTCAAGTAGGAGTCAGGGGCAAGGTCGT
GGTCGTGGCGGGGGCCGTGGCCGCAGCAGCAGTCGTGGCCGCGGCGGAGG
CGGTCGCGGCGGCGGCGGCGGCGGGGGTCGCGGCGGCCGCTCAGGCGGAT
CCGGAGGAGTCGAGGAGAGCAAGGGAAGCAGCAGTGGAGGCGCCGATGGC
GGCGGTGGCGGGGACTATGAGTTCCCGGGCCGGTCCTTTAGGTGTGGACA
TCGTAGACATCAAGCGATCGGCTGCACTACCAACGAGAAGGACTTCCTGC
CGTGGTGTGCGCGCTGCGAGGGGTGGGGCCACACCAAAGAAATGTGCGCG
ACGGAGGAGGCCGTCCTAGCGCAAGTGGTGGAGCATGAGAGCGACGTGGA
CTCCGTGGAAGACCAGGCGTTTTGTGCCGTGGCAGTCCCCCCAGGCGAGT
GTGGTACCGTTGGTGAAGTAGGTCTAGTGGGGGATGTGGAACAAGGCCAG
GCGGTGTACGTGGCCGACACAGCGGCCACGTGCTCCATGTTCCGATGTGC
AGACAACTTCGTGAACTACCGTGAGCGTAGCGGTTGGGTGAAGGGGATCG
GAGGCGACAAGGCCCCCGTTCCTCTTCTAGGATACGGAGATGTGACCTTA
GTCCTACAGACGGAAGATGGTGGAGTACCCGTACCAGTACTGAATGCTGC
CCATGTACCAGAGGCCCCCTACAACCTCCTCTCGCTGTCTTCGTTGGCGG
AGGAGGGCCACACGTATTCGGGGATGAAGGGGGGCCTCACGCTGACCACG
AAAGCCGGGGGGGAGGTGTGGTTCCCCCGGACTGGAAAGCTGCTGACCCA
ACGAGGCTATCAATTAAAGCCAACGCTAAACACCGCCTGTGCCGCACTCA
TTGTTCCTGGCGATNAAGGGCCACGCGTATTCGGGGATGAAGGGGGGCCT
CACGCTGACTACGAAAGCCGGGGGGGAGGTGTGGTTCCCCCGGACTGGAA
AGCTGCTGACCCAACGAGGCTATCAAATAAAGCCAACGCTACACACCGCC
TGTGCCGCACTCATTGTTCCTGGCGATGCGAAAGCAGCCAACCCCACTGA
CCTCAACGAGTACCACCTCGCGCACGGCCATGCCCACGAGACATTGCTCA
GGATCACGGCGGAGCAGCAGGGAGTGCAGCTGACGGATGGACCGCTGCTA
CCCTGTCTTGGCTGTTCGAT

Coding sequence (CDS) from alignment at Scaffold_30:211953..213572-

>EsuBft499_13a-0001 ID=EsuBft499_13a-0001|Name=EsuBft499_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1359bp|location=Sequence derived from alignment at Scaffold_30:211953..213572- (Ectocarpus subulatus male Bft15b)
ATGAAGAGGGAAGAGACGCCCCAGGGAGCTCTTCGTGAGCAAAAGACCAT
ACACGACCCTGAACCATGTGTACAGCCGTCAGAGCGCCTCAAGTCCCTGA
CGTCGACCAAGATCTTTAGAGGTGAAAACCTCCAAAACGCCCTCCATGAG
ATGCTCCAAACCGCAAAGTCCTTAACCGAGAAAGGACCAACTATCAACCA
AACGTTCGTCCTTCACCTCTTCCTGGATGCCCTTTCGGACGAGTATGCCA
TGACAATGCACAACCTGCGACACGCGAAGGAGTTGACGCGGACCGGTGTG
CTAAAGGAAGTAATGATCGAATCCAAGGCAATCAAGGACAAGCTGGAGCA
GGGGAAAGGAAAAGGGGCGAAGGGCGCAGAGCAAGCGTACTTCGCCCACG
GTGAGGGCCGCAGGGAGCGGTACTCAAGTAGGAGTCAGGGGCAAGGTCGT
GGTCGTGGCGGGGGCCGTGGCCGCAGCAGCAGTCGTGGCCGCGGCGGAGG
CGGTCGCGGCGGCGGCGGCGGCGGGGGTCGCGGCGGCCGCTCAGGCGGAT
CCGGAGGAGTCGAGGAGAGCAAGGGAAGCAGCAGTGGAGGCGCCGATGGC
GGCGGTGGCGGGGACTATGAGTTCCCGGGCCGGTCCTTTAGGTGTGGACA
TCGTAGACATCAAGCGATCGGCTGCACTACCAACGAGAAGGACTTCCTGC
CGTGGTGTGCGCGCTGCGAGGGGTGGGGCCACACCAAAGAAATGTGCGCG
ACGGAGGAGGCCGTCCTAGCGCAAGTGGTGGAGCATGAGAGCGACGTGGA
CTCCGTGGAAGACCAGGCGTTTTGTGCCGTGGCAGTCCCCCCAGGCGAGT
GTGGTACCGTTGGTGAAGTAGGTCTAGTGGGGGATGTGGAACAAGGCCAG
GCGGTGTACGTGGCCGACACAGCGGCCACGTGCTCCATGTTCCGATGTGC
AGACAACTTCGTGAACTACCGTGAGCGTAGCGGTTGGGTGAAGGGGATCG
GAGGCGACAAGGCCCCCGTTCCTCTTCTAGGATACGGAGATGTGACCTTA
GTCCTACAGACGGAAGATGGTGGAGTACCCGTACCAGTACTGAATGCTGC
CCATGTACCAGAGGCCCCCTACAACCTCCTCTCGCTGTCTTCGTTGGCGG
AGGAGGGCCACACGTATTCGGGGATGAAGGGGGGCCTCACGCTGACCACG
AAAGCCGGGGGGGAGGTGTGGTTCCCCCGGACTGGAAAGCTGCTGACCCA
ACGAGGCTATCAAATAAAGCCAACGCTACACACCGCCTGTGCCGCACTCA
TTGTTCCTGGCGATGCGAAAGCAGCCAACCCCACTGACCTCAACGAGGAG
TGCAGCTGA