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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7FIV2 |
| ProteomeId | EsuBft471_12 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 231 |
| Hectar predicted targeting category | other localisation |
| Evalue | 3.94e-107 |
| EggNOG OGs | KOG4373@1|root,KOG4373@2759|Eukaryota |
| Date last modified | 2016-06-15 |
| Date creation | 2016-06-15 |
| Preferred name | WRN |
| KEGG ko | ko:K10900,ko:K20777 |
| GOs | GO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113 |
| EC | 3.1.11.1,3.6.4.12 |
| Description | 3'-5' exonuclease activity |
| COG category | C |
| BRITE | ko00000,ko01000,ko03032,ko03400 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft471_12a-0001 ID=EsuBft471_12a-0001|Name=EsuBft471_12a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2318bp|location=Sequence derived from alignment at Scaffold_242:321755..325186- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTGTCGCCGCAGAATCGATCCATCTACGAGATCAAGGGGAATATAAA AGCAAGCAGGAAGCACGAGAACGGGAAAGTCAAGCGGATCTCTGAGTTCC CTTACCGTGACGGATGGGCGTCACCTCCTCTGCCGTCGCTACAGCAGTCC GCCGGTATACCATCCGTGGAGCCTTTTTACTTGAAAAAAGTGTTCGTGTG GGTGCCTGAATACATCTGGAACGAGATCGACTGCATTCCCTGTCCGCATT GTGGCGAGCGTGGGCAGCCGGATGGGTGGAATACTGACGCACGCCGAGTG TTCTTAGAACAAGATGTCTGTTATTTGATCGGCTACAGGTACTACTGCAA GCGATGCACCGACGCCAACGCCATGAAGAACAGTGAGGATCGTACAACCG CGACCTTCAAAGCGTGGGATCCTGACGTTTTGGCCCGGATGGATGATTTC GTGTCGAAGGAATTTCCGTTTGTCCTGACGAGGAAAGCCGCTATTTCCAG GAGCTTGATTGACCGTCTTGCAGATGATCTCCTTGAGGGGAAGGGCTTCG CGGCGACTTCGAAGTCCCTTCAAAATGCGTACACCGCAACGTACTTCAAA CTTTATCGTTCGTACGTATCTCTAGCCAACCGCCGTGTGTCTCAACTTAA GGGCTTGGGCTTGTTGGGGCCAGATGCCGACGTCGGTAAGATCCCGAAAT TCGAGGAAATGGCAGACGCGTTGGGGTTTAACAGCAGGCATCCATCGGCG CACTATCTGGGAGACATCTGGCACAAGTGGTTCGACGAGATGCCTGTGAC GATTTTTCTGCGGAACTGTCGCCGGTTGGTGCCGGAACGGGAACGTTTGT TGAAGCGTTTCAATAAAGTGATAGAGCTGTTCTGGGATGTCATTGATTCC AAGTCGGGAGAAATTCTCCTACGGCCGAAAGCCATGGACGCCGTTAACCT CCTGCGCAGGCACATCGAAGCTGACCGCTTGAGTGATCCCAACGATGTAG CGCTGTACTACACAACGGGCAAGACCACAGGGGGGATCACCTCGCGTCGC TGTGTCCGCGGAACCAATAGCACCGAGGGTTACCATCGTTTGCTCCTCAG GTTGCTATCGACGTATTGCGCGTCCCCCGCGCTAGCCCACTCCATCCTTC TTGAGTTCAAACATCGCTGGAATATCAAGATGGCTGTGAAGAACCTGTCG AAGGAGATCGGCGGATGCTTCGATCAGTTCGACATCGAGATCATTCAACG CGAGACGACGTCCTGGGACCCGGACTGCCCGGTATTTTCTGAATAAGTTT CGGCACTTGACGCGGCAGACACTGGCGAGAGGAGTGGACTCGCGCAGAGC ATGTGGGGGGGGGCTGATACTGGTGATTTGGGGGTTGATGCTCTTGGCGA GTAAGAAATGGTCCAAAATGCTGTGCCTCTTCCTAAGCTCACGCATTCCG CTAACGAGTATGCACGCGTGATGAACGTCGGAATGCCTGAAATGCCCGTG CACAATGGAGTAGAGAGGCGGAAATTTGCCAGCGAACTCAGTGCTTTTCA ATATATACCGGGCCAGCAGATGGGTAGACTCCAGCAATACCAGGGCGTCA ACTTCGCCGGATGGGCACAGAAGTGGAACGAGCACTGCGGCAAGATTGAA TCTGGCCGGGTGGAGTGGGAAGCAGTGTATCGTAAAACCGCGAGGCAATT GCAGGCTTACTACGAGCTTTACAGACAACGCGCGAATGCTACGAACACTA TGATTCCATTTCGCCAAGCAATGCGGAGTTGCGAAGTACTTTGCAGGAGC CTGCGGGAGGCGAGGAGTTTGCTGGTATGGTCGGTAGCGTAGTGCCCCCG GCTGTTCCACGGAGTCGTTCTGGGGCAGGAGTTGGCGCTTGTTACGGGGG TGGCGCAGCGGCTGGTGTAGTGGGTGGCGCAGCTGCTGATGTAGGGGGTG GACTGATGGTCGATGTTGTGGGCGGCGGACATGCGGAGTTTAGCCCAGAA CCAGAGTCGACAAAGGCCGAGGGCCCACCTCGAGCCCCTCAGCAGTATTT TACGTGCGGCCACCGCAGACAGCAAGGCGGAAATAAGGTGGCGCACCCTC CCCCGCGAGAGAGGGGAGAGAGCCACGCTAACAATGTACCAGTTGAGGTG TACCGGCCTGACGCACACAGGACTGGAAAAATGAGGCCGGAGGGGAAGGG AGGGTGGTCTAAGTGTGATTGTGCCAAGTGCACTTCAACTGCATAGATAG CCAACGTCCGGGGTAGGTAGCATTTTGTTTTTGTTTCGTCTCGTCGTAAA AAATCGCAATGGTAAAGT back to topprotein sequence of EsuBft471_12a-0001 >EsuBft471_12 ID=EsuBft471_12|Name=EsuBft471_12a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=431bp
MLSPQNRSIYEIKGNIKASRKHENGKVKRISEFPYRDGWASPPLPSLQQS AGIPSVEPFYLKKVFVWVPEYIWNEIDCIPCPHCGERGQPDGWNTDARRV FLEQDVCYLIGYRYYCKRCTDANAMKNSEDRTTATFKAWDPDVLARMDDF VSKEFPFVLTRKAAISRSLIDRLADDLLEGKGFAATSKSLQNAYTATYFK LYRSYVSLANRRVSQLKGLGLLGPDADVGKIPKFEEMADALGFNSRHPSA HYLGDIWHKWFDEMPVTIFLRNCRRLVPERERLLKRFNKVIELFWDVIDS KSGEILLRPKAMDAVNLLRRHIEADRLSDPNDVALYYTTGKTTGGITSRR CVRGTNSTEGYHRLLLRLLSTYCASPALAHSILLEFKHRWNIKMAVKNLS KEIGGCFDQFDIEIIQRETTSWDPDCPVFSE back to topmRNA from alignment at Scaffold_242:321755..325186- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft471_12a-0001 ID=EsuBft471_12a-0001|Name=EsuBft471_12a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3432bp|location=Sequence derived from alignment at Scaffold_242:321755..325186- (Ectocarpus subulatus male Bft15b) ATGTTGTCGCCGCAGAATCGATCCATCTACGAGATCAAGGGGAATATAAA
AGCAAGCAGGAAGCACGAGAACGGGAAAGTCAAGCGGATCTCTGAGTTCC
CTTACCGTGACGGATGGGCGTCACCTCCTCTGCCGTCGCTACAGCAGTCC
GCCGGTAAGTGCAGCAGTGGACTGGGCGTAGCTACAGAAAGAGGTGCTTT
TGTAGATTGTTTCACCATGTAGCTGCTGTGTACGTTGCGCAGGAGCTTCA
CAGCAGCACCACATGAGACGATCGCATTCGTTGGTTTCCTCGCCACGTAG
GTCCTCCACAACACGCGCACCAAGTAGAGCTTCGATAGTTTTTCCCTGGC
CTTGCTACAGGTATACCATCCGTGGAGCCTTTTTACTTGAAAAAAGTGTT
CGTGTGGGTGCCTGAATACATCTGGAACGAGATCGACTGCATTCCCTGTC
CGCATTGTGGCGAGCGTGGGCAGCCGGATGGGTGGAATACTGACGCACGC
CGAGTGTTCTTAGAACAAGATGTCTGTTATTTGATCGGCTACAGGTACGC
CTGCCCAGAGTGCTGTGGATATTTGTCATATACACACGTCCAACTTTTTC
TCTGCTTCGTGTGTGTTTCCTAGCAACATGCGTAGACTAGCGGAGTGCTT
ACTGAAGTATCGCGTGTGCGCTGTGCTTCGCGTCTTGGTACCAGGTACTA
CTGCAAGCGATGCACCGACGCCAACGCCATGAAGAACAGTGAGGATCGTA
CAACCGCGACCTTCAAAGCGTGGGATCCTGACGTTTTGGCCCGGATGGAT
GATTTCGTGTCGAAGGAATTTCCGTTTGTCCTGACGAGGAAAGCCGCTAT
TTCCAGGAGCTTGATTGACCGTCTTGCAGATGATCTCCTTGAGGGGAAGG
GCTTCGCGGCGACTTCGAAGTCCCTTCAAAATGCGTACACCGCAACGTAC
TTCAAACTTTATCGTTCGTACGTATCTCTAGCCAACCGCCGTGTGTCTCA
ACTTAAGGGCTTGGGCTTGTTGGGGCCAGATGCCGACGTCGGTAAGATCC
CGAAATTCGAGGAAATGGCAGACGCGTTGGGGTTTAACAGCAGGCATCCA
TCGGCGCACTATCTGGGAGACATCTGGCACAAGTGGTTCGACGAGATGCC
TGTGGTACTCTGTGCAGCAGTCGCGCTTGTCAGCAAGGAGACACGGGCGA
TAGTCATGATGATATCGACGAGGACAATGTGAGTGCAATGTCAGGGTAGT
TCTTGAGAGTTGTCATTGACGGCTGTTTGCTGCAAGCCGCTCATCCACCG
GTGGTCTGTTCGCTGAACCACTTTTTTTCTCAGGAGATGAAGAGGCACAT
GCTCAAGGTTCGGCTGGACATCTTTCACGCGCTGCAACGTATCTCGCTCC
TGGCGAAGAGCCACGGCGCACACAGGTCATTCATGAGTCGATTGAGAGAC
GCATGCTTCGTCATCAACAAAGACGATATCCGCGGTAAGTGTTTTTTGCG
TTGCTTGTGTTGTTCGTCGGGGTCGAAATATCGAGGTAGTGATCATTTCG
CGCAGGAATACATGCATTGAAGCACACTTCCTATGTCGTAGCTAACAACG
GTTTTCGGGTTTGTCTTACAATATCGCGCCTGTGTACAAAATCTCGGGTA
GAAGAATCTCTTCAAGCGCAAGGCATGACGCCGGAGAAGGTGAAAGAACA
CAAGGACAGGAACTAGACGATTTTTCTGCGGAACTGTCGCCGGTTGGTGC
CGGAACGGGAACGTTTGTTGAAGCGTTTCAATAAAGTGATAGAGCTGTTC
TGGGATGTCATTGATTCCAAGTCGGGAGAAATTCTCCTACGGCCGAAAGC
CATGGACGCCGTTAACCTCCTGCGCAGGCACATCGAAGCTGACCGCTTGA
GTGATCCCAACGATGTAGCGCTGTACTACACAACGGGCAAGACCACAGGG
GGGATCACCTCGCGTCGCTGTGTCCGCGGAACCAATAGCACCGAGGTGAG
CACCACGCTTCTGAGAAAGCAACCAATCCCTGCTCATTGCTCGTTTTATG
CCATCGAAGTACCGTCCAATATGCTCATCTGAATCTTTCTCGCACAACTC
TTGGCGCATTTGGTTGGGGGTCGGTGCGATTTCGTACCCATACGCACCCT
CTGTTTTTTCGTCGTCCGCGTGTTTCTTTTTTTCTCGAAAGGGTTACCAT
CGTTTGCTCCTCAGGTTGCTATCGACGTATTGCGCGTCCCCCGCGCTAGC
CCACTCCATCCTTCTTGAGTTCAAACATCGCTGGAATATCAAGATGGCTG
TGAAGAACCTGTCGAAGGAGATCGGCGGATGCTTCGATCAGTTCGACATC
GAGATCATTCAACGCGAGACGACGTCCTGGGACCCGGACTGCCCGGTATT
TTCTGAATAAGTTTCGGCACTTGACGCGGCAGACACTGGCGAGAGGAGTG
GACTCGCGCAGAGCATGTGGGGGGGGGCTGATACTGGTGATTTGGGGGTT
GATGCTCTTGGCGAGTAAGAAATGGTCCAAAATGCTGTGCCTCTTCCTAA
GCTCACGCATTCCGCTAACGAGTATGCACGCGTGATGAACGTCGGAATGC
CTGAAATGCCCGTGCACAATGGAGTAGAGAGGCGGAAATTTGCCAGCGAA
CTCAGTGCTTTTCAATATATACCGGGCCAGCAGATGGGTAGACTCCAGCA
ATACCAGGGCGTCAACTTCGCCGGATGGGCACAGAAGTGGAACGAGCACT
GCGGCAAGATTGAATCTGGCCGGGTGGAGTGGGAAGCAGTGTATCGTAAA
ACCGCGAGGCAATTGCAGGCTTACTACGAGCTTTACAGACAACGCGCGAA
TGCTACGAACACTATGATTCCATTTCGCCAAGCAATGCGGAGTTGCGAAG
TACTTTGCAGGAGCCTGCGGGAGGCGAGGAGTTTGCTGGTATGGTCGGTA
GCGTAGTGCCCCCGGCTGTTCCACGGAGTCGTTCTGGGGCAGGAGTTGGC
GCTTGTTACGGGGGTGGCGCAGCGGCTGGTGTAGTGGGTGGCGCAGCTGC
TGATGTAGGGGGTGGACTGATGGTCGATGTTGTGGGCGGCGGACATGCGG
AGTTTAGCCCAGAACCAGAGTCGACAAAGGCCGAGGGCCCACCTCGAGCC
CCTCAGCAGTATTTTACGTGCGGCCACCGCAGACAGCAAGGCGGAAATAA
GGTGGCGCACCCTCCCCCGCGAGAGAGGGGAGAGAGCCACGCTAACAATG
TACCAGTTGAGGTGTACCGGCCTGACGCACACAGGACTGGAAAAATGAGG
CCGGAGGGGAAGGGAGGGTGGTCTAAGTGTGATTGTGCCAAGTGCACTTC
AACTGCATAGATAGCCAACGTCCGGGGTAGGTAGCATTTTGTTTTTGTTT
CGTCTCGTCGTAAAAAATCGCAATGGTAAAGT back to topCoding sequence (CDS) from alignment at Scaffold_242:321755..325186- >EsuBft471_12a-0001 ID=EsuBft471_12a-0001|Name=EsuBft471_12a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1296bp|location=Sequence derived from alignment at Scaffold_242:321755..325186- (Ectocarpus subulatus male Bft15b) ATGTTGTCGCCGCAGAATCGATCCATCTACGAGATCAAGGGGAATATAAA AGCAAGCAGGAAGCACGAGAACGGGAAAGTCAAGCGGATCTCTGAGTTCC CTTACCGTGACGGATGGGCGTCACCTCCTCTGCCGTCGCTACAGCAGTCC GCCGGTATACCATCCGTGGAGCCTTTTTACTTGAAAAAAGTGTTCGTGTG GGTGCCTGAATACATCTGGAACGAGATCGACTGCATTCCCTGTCCGCATT GTGGCGAGCGTGGGCAGCCGGATGGGTGGAATACTGACGCACGCCGAGTG TTCTTAGAACAAGATGTCTGTTATTTGATCGGCTACAGGTACTACTGCAA GCGATGCACCGACGCCAACGCCATGAAGAACAGTGAGGATCGTACAACCG CGACCTTCAAAGCGTGGGATCCTGACGTTTTGGCCCGGATGGATGATTTC GTGTCGAAGGAATTTCCGTTTGTCCTGACGAGGAAAGCCGCTATTTCCAG GAGCTTGATTGACCGTCTTGCAGATGATCTCCTTGAGGGGAAGGGCTTCG CGGCGACTTCGAAGTCCCTTCAAAATGCGTACACCGCAACGTACTTCAAA CTTTATCGTTCGTACGTATCTCTAGCCAACCGCCGTGTGTCTCAACTTAA GGGCTTGGGCTTGTTGGGGCCAGATGCCGACGTCGGTAAGATCCCGAAAT TCGAGGAAATGGCAGACGCGTTGGGGTTTAACAGCAGGCATCCATCGGCG CACTATCTGGGAGACATCTGGCACAAGTGGTTCGACGAGATGCCTGTGAC GATTTTTCTGCGGAACTGTCGCCGGTTGGTGCCGGAACGGGAACGTTTGT TGAAGCGTTTCAATAAAGTGATAGAGCTGTTCTGGGATGTCATTGATTCC AAGTCGGGAGAAATTCTCCTACGGCCGAAAGCCATGGACGCCGTTAACCT CCTGCGCAGGCACATCGAAGCTGACCGCTTGAGTGATCCCAACGATGTAG CGCTGTACTACACAACGGGCAAGACCACAGGGGGGATCACCTCGCGTCGC TGTGTCCGCGGAACCAATAGCACCGAGGGTTACCATCGTTTGCTCCTCAG GTTGCTATCGACGTATTGCGCGTCCCCCGCGCTAGCCCACTCCATCCTTC TTGAGTTCAAACATCGCTGGAATATCAAGATGGCTGTGAAGAACCTGTCG AAGGAGATCGGCGGATGCTTCGATCAGTTCGACATCGAGATCATTCAACG CGAGACGACGTCCTGGGACCCGGACTGCCCGGTATTTTCTGAATAA back to top
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